Index of /~jferna10/RepeatBrowserHub/data

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]3UTR_knownGene32_12.bed2020-02-10 22:18 7.1M 
[ ]5UTR_knownGene32_12.bed2020-02-10 22:18 7.5M 
[ ]CDS_knownGene32_12.bed2020-02-10 22:19 25M 
[ ]DNAse_key.tab2020-02-20 12:33 1.3K 
[ ]Dfam.embl2019-06-18 16:26 23M 
[ ]Dfam_annotations.bed2020-02-07 21:26 5.7K 
[ ]GENCODE_v32_knownAttrs.tab2020-02-08 13:09 26M 
[ ]HERV_full.bed2020-02-07 21:13 507  
[ ]ORFs.bed2020-02-07 21:31 11K 
[ ]RB_knownGene.bed2020-02-10 08:25 443K 
[ ]RB_knownGene.unmapped2020-02-10 08:25 35M 
[ ]RB_knownGene_exons.bed2020-02-10 13:41 542K 
[ ]RB_knownGene_exons.unmapped2020-02-10 13:41 133M 
[ ]RepBro_5UTR_knownGene32_12.bed2020-02-10 22:19 18M 
[ ]RepBro_5UTR_knownGene32_12.unmapped2020-02-10 22:19 3.7M 
[ ]RepBro_cds_knownGene32_exons.bed2020-02-14 11:18 114K 
[ ]RepBro_cds_knownGene32_exons.unmapped2020-02-14 11:18 49M 
[ ]RepBro_cds_knownGene32_exons_14.bed2020-02-14 21:21 233K 
[ ]RepBro_knownGene.bb2020-02-11 20:53 373K 
[ ]RepBro_knownGene32_exons.bed2020-02-10 16:33 2.6M 
[ ]RepBro_knownGene32_exons.unmapped2020-02-10 16:33 86M 
[ ]RepBro_knownGene_32_rename.bed2020-02-10 16:40 2.2M 
[ ]RepBro_ncRNA_knownGene32_12.bed2020-02-14 11:18 1.8M 
[ ]RepBro_ncRNA_knownGene32_12.unmapped2020-02-14 11:18 28M 
[ ]RepBro_ncRNA_knownGene32_14.bed2020-02-14 21:21 3.8M 
[ ]RepBro_temp.bed2020-02-11 20:02 592K 
[ ]RepBro_temp.unmapped2020-02-11 20:00 38M 
[ ]RepBro_utr_knownGene32_exons.bed2020-02-14 20:01 777K 
[ ]RepBro_utr_knownGene32_exons.unmapped2020-02-14 20:01 13M 
[ ]RepBro_utr_knownGene32_exons_14.bed2020-02-14 21:21 1.5M 
[ ]SRR1576253_PRDM1-Blimp1_mesendo_peaks_hg38reps.bed2020-02-17 15:02 113K 
[ ]SRR1576254_PRDM1-Blimp1_endo_peaks_hg38reps.bed2020-02-17 15:02 2.8M 
[ ]SRR1576255_PRDM1-Blimp1_h64_peaks_hg38reps.bed2020-02-17 15:02 9.8K 
[ ]SRR1576256_PRDM1-Blimp1_endo_peaks_hg38reps.bed2020-02-17 15:02 34K 
[ ]SRR1576257_Cdx2_meso_peaks_hg38reps.bed2020-02-17 15:02 52K 
[ ]SRR1576258_Ctcf_h64_peaks_hg38reps.bed2020-02-17 15:02 730K 
[ ]SRR1576259_Ctcf_h64_peaks_hg38reps.bed2020-02-17 15:02 312K 
[ ]SRR1576260_Ctcf_h64_peaks_hg38reps.bed2020-02-17 15:02 209K 
[ ]SRR1576261_Ctcf_meso_peaks_hg38reps.bed2020-02-17 15:02 85K 
[ ]SRR1576262_Ctcf_mesendo_peaks_hg38reps.bed2020-02-17 15:02 116K 
[ ]all_cds_knownGene32.bed2020-02-12 23:20 44M 
[ ]bigPsl.as2017-02-17 14:02 1.7K 
[ ]build.as2020-02-11 06:46 1.6K 
[ ]build.ix2020-03-05 13:52 69K 
[ ]build.ixx2020-03-05 13:52 32  
[ ]cds_knownGene32_12.bed2020-02-13 20:08 16M 
[ ]cds_knownGene32_exons.bed2020-02-13 20:09 37M 
[ ]collapse_RepBro_cds_knownGene32_exons_14.bed2020-02-14 21:21 214K 
[ ]collapse_RepBro_ncRNA_knownGene32_14.bed2020-02-16 19:23 3.3M 
[ ]collapse_RepBro_utr_knownGene32_exons_14.bed2020-02-16 19:23 1.4M 
[ ]cons_gag.bed2020-02-07 21:31 1.9K 
[ ]cons_pol.bed2020-02-07 21:31 3.2K 
[ ]encRegTfbsClusteredWithCells.hg38.bed2020-01-27 15:25 498M 
[ ]encode_DNAse_5.bed2020-02-20 12:50 229M 
[ ]encode_DNAse_5_hg38reps.bed2020-02-20 12:51 18M 
[ ]encode_DNAse_5_hg38reps.unmapped2020-02-20 12:51 251M 
[ ]encode_DNAse_6_hg38reps.bed2020-02-19 13:49 34M 
[ ]encode_DNAse_6_hg38reps.unmapped2020-02-19 13:13 1.2G 
[ ]encode_DNAse_6_hg38reps_named.bed2020-02-20 12:38 21M 
[ ]encode_DNAse_7_hg38reps.bed2020-02-20 13:09 73M 
[ ]exact_annotations.bed2020-02-07 17:56 2.3K 
[ ]gencode.as2020-02-16 18:02 804  
[ ]gencode_cds.bb2020-02-16 19:23 194K 
[DIR]genes/2020-02-08 16:04 -  
[TXT]hg38_TE_phlyo.txt2020-02-11 12:48 16K 
[ ]hg38reps.sizes2020-02-11 19:01 15K 
[ ]imbeault2017_summit_summary.bed2020-02-14 09:59 30K 
[ ]intstrip_annotations.bed2020-02-07 18:01 2.6K 
[ ]knownGene32.bb2019-09-04 18:09 14M 
[ ]knownGene32.bb.12019-09-04 18:09 14M 
[ ]knownGene32.bed2020-02-11 20:47 42M 
[ ]knownGene32_12.bed2020-02-11 20:47 30M 
[ ]knownGene32_14.bed2020-02-10 20:32 154M 
[ ]knownGene32_exons.bed2020-02-13 20:11 44M 
[ ]knownGene32_exons_10.bed2020-02-13 17:30 5.4M 
[ ]knownGene32_exons_14.bed2020-02-13 21:18 6.2M 
[TXT]knownGene32_keyfile.txt2020-02-11 20:51 17M 
[ ]known_gene_with_thicks.bed2020-02-13 21:39 3.8M 
[ ]macs2.log2020-02-13 22:54 0  
[DIR]macs2/2020-02-19 22:39 -  
[ ]manual_annotations.bed2020-02-07 18:08 136  
[ ]multi_exon_lift.bed2020-02-14 11:18 20K 
[ ]ncRNA_knownGene32_12.bed2020-02-13 17:35 6.1M 
[ ]ncRNA_knownGene32_exons.bed2020-02-13 20:15 22M 
[ ]ncRNA_knownGene32_temp.bed2020-02-13 17:39 14M 
[ ]other_cons_aln.bak2020-02-12 14:32 719K 
[ ]other_cons_aln.bb2020-02-12 14:43 461K 
[ ]other_cons_aln.psl2020-02-12 14:30 719K 
[TXT]other_cons_aln.txt2020-02-12 14:43 772K 
[DIR]peps/2020-02-07 21:31 -  
[ ]s.bed2020-02-14 11:19 2.8M 
[ ]single_exon_lift.bed2020-02-14 11:18 3.8M 
[ ]small_cds_knownGene32.bed2020-02-12 23:19 37M 
[ ]small_knownGene32_12.bed2020-02-12 23:17 16M 
[ ]summary.old2020-02-07 09:16 59K 
[TXT]summary.tsv2020-02-13 04:21 130K 
[ ]t.bed2020-02-14 11:18 3.1M 
[ ]t.genePred2020-02-13 00:00 3.7M 
[ ]t1.bed2020-02-14 11:35 1.8M 
[ ]t2.bed2020-02-14 11:18 144K 
[ ]t3.bed2020-02-14 11:18 908K 
[ ]test.bed2020-02-19 11:33 263  
[ ]test.unmapped2020-02-14 16:50 44M 
[DIR]test/2020-02-17 14:24 -  
[ ]tmp.bed2020-02-17 15:32 418K 
[DIR]tracks/2020-02-14 17:24 -  
[ ]trf.bed2020-02-12 12:00 51K 
[ ]trf.out2020-02-12 11:08 1.6M 
[ ]trf.tab2020-02-12 11:08 53K 
[ ]tsankov2014.key2020-02-12 17:17 9.2K 
[ ]tt2020-02-13 14:14 38K 
[ ]u.bed2020-02-13 00:03 3.2M 
[ ]ucscGenes.bb2020-02-08 11:07 565K 
[ ]ucscGenes.bed2020-02-08 11:08 1.0M 
[ ]utr_knownGene32_exons.bed2020-02-13 20:12 11M 
[ ]wgEncodeAwgDnaseMasterSites.bed2014-06-30 13:28 185M 
[ ]wgEncodeAwgDnaseMasterSites_hg38reps.bed2020-02-19 13:21 0  
[ ]wgEncodeAwgDnaseMasterSites_hg38reps.unmapped2020-02-19 13:21 0  
[ ]wgEncodeAwgDnaseMasterSources.tab2014-11-20 13:53 1.3K 
[ ]wgEncodeRegDnaseClusteredV3.bed2014-09-04 14:49 209M 
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