aviti0458A
Run Name
29 + 91
Lane 1 (R1 + R2)
29 + 91
Lane 2 (R1 + R2)
1,109,387,686
Polonies
97.6%
Q30
97.5%
Index Assignment
129.752
Assigned Yield (Gb)
10 + 10
Lane 1 (I1 + I2)
10 + 10
Lane 2 (I1 + I2)
0.00%
Unexpected Pairs
Index Percentiles
Percentile Sample I1 I2 Polonies % Polonies
5th Adept_CB4 TGTCGACACA CTGTCAGACA 0 0.0000
50th Adept_CB2 ACGATCTGTG AGACTCTCGT 0 0.0000
95th 10XSC0371 GCCACTTCGA GAATACGCCA 1,081,424,039 97.4794
All Indices
# Sample I1 I2 Polonies % Polonies
1 10XSC0371 GCCACTTCGA GAATACGCCA 1,081,424,039 97.4794
2 Adept_CB1 CTAGCGACAT TACGAGCTAG 0 0.0000
3 Adept_CB2 ACGATCTGTG AGACTCTCGT 0 0.0000
4 Adept_CB3 GACTATGTGC GCTAGTAGTC 0 0.0000
5 Adept_CB4 TGTCGACACA CTGTCAGACA 0 0.0000
Top Unassigned Sequences
# I1 I2 Polonies % Polonies
1 GCCACTCGAA GAATACGCCA 3,110,315 0.2804
2 ATGTCGCTAG CTAGCTCGTA 2,830,333 0.2551
3 CACAGATCGT ACGAGAGTCT 2,505,568 0.2259
4 TGTGTCGACA TGTCTGACAG 2,328,627 0.2099
5 GCACATAGTC GACTACTAGC 1,935,940 0.1745
6 GCACTTCGAA GAATACGCCA 1,427,991 0.1287
7 GCCACTTCGA GATACGCCAA 1,177,399 0.1061
8 GCCATTCGAA GAATACGCCA 897,120 0.0809
9 CCACTTCGAA GAATACGCCA 734,045 0.0662
10 GCCCTTCGAA GAATACGCCA 722,452 0.0651
11 GCCACTTCGA GAATAGCCAA 524,773 0.0473
12 GCCACTTTCG GAATACGCCA 481,255 0.0434
13 GCCCACTTCG GAATACGCCA 409,082 0.0369
14 TGTGTCGACA TGTCTGACCG 353,908 0.0319
15 GCCACTTCGA GAATCGCCAA 322,607 0.0291
16 GCCACTTCGA GAAATACGCC 297,602 0.0268
17 GCCACTTCGA AATACGCCAA 279,208 0.0252
18 GCCACCTTCG GAATACGCCA 230,922 0.0208
19 GCCACTTCGA GAAACGCCAA 219,590 0.0198
20 GCCACTTCGA GAATACCCAA 198,662 0.0179
21 GCCACTTCGA GAATAACGCC 194,518 0.0175
22 ATGTCGCCAG CTAGCTCGTA 162,524 0.0146
23 CGCCACTTCG GAATACGCCA 155,715 0.0140
24 TGTGTCGCCA TGTCTGACCG 137,375 0.0124
25 GCCACTTCGA GAATACGGCC 137,134 0.0124
26 GCCACTTCGA GGAATACGCC 123,759 0.0112
27 GGCCACTTCG GAATACGCCA 96,814 0.0087
28 GCCAACTTCG GAATACGCCA 81,875 0.0074
29 CCCAGATCGT ACGAGAGTCT 72,462 0.0065
30 ATGTCGCCAG CTAGCCCGTA 20,292 0.0018
31 CACAGATCGT ACGAGAGTCA 17,675 0.0016
42.1
Mean Q
96.3%
Q30
84.9%
Q40
N/A
Reads eliminated
N/A
Mean read length
N/A
Trim type
N/A
Min read length