aviti0453B
Run Name
29 + 91
Lane 1 (R1 + R2)
29 + 91
Lane 2 (R1 + R2)
1,092,151,802
Polonies
97.9%
Q30
98.3%
Index Assignment
128.805
Assigned Yield (Gb)
10 + 10
Lane 1 (I1 + I2)
10 + 10
Lane 2 (I1 + I2)
0.01%
Unexpected Pairs
Index Percentiles
Percentile Sample I1 I2 Polonies % Polonies
5th Adept_PhiX_CB3 GCACATAGTC GACTACTAGC 2,704,168 0.2476
50th Adept_PhiX_CB4 TGTGTCGACA TGTCTGACAG 3,488,858 0.3194
95th 10xSC0368Pool GATCGCGGTA CGGAACCGTC 1,060,160,840 97.0708
All Indices
# Sample I1 I2 Polonies % Polonies
1 10xSC0368Pool GATCGCGGTA CGGAACCGTC 1,060,160,840 97.0708
2 Adept_PhiX_CB1 ATGTCGCTAG CTAGCTCGTA 3,995,914 0.3659
3 Adept_PhiX_CB4 TGTGTCGACA TGTCTGACAG 3,488,858 0.3194
4 Adept_PhiX_CB2 CACAGATCGT ACGAGAGTCT 3,190,838 0.2922
5 Adept_PhiX_CB3 GCACATAGTC GACTACTAGC 2,704,168 0.2476
Top Unassigned Sequences
# I1 I2 Polonies % Polonies
1 GATCGCGTAA CGGAACCGTC 1,721,127 0.1576
2 GATCGCGGTA GGAACCGTCA 1,201,458 0.1100
3 NNTCGCGGTA CGGAACCGTC 1,136,197 0.1040
4 GATCCGGTAA CGGAACCGTC 1,125,348 0.1030
5 GATCGCGGTA CGGAACGTCA 1,124,481 0.1030
6 ATCGCGGTAA CGGAACCGTC 921,517 0.0844
7 GATCGCGGTA CGGACCGTCA 748,525 0.0685
8 GATGCGGTAA CGGAACCGTC 743,884 0.0681
9 GATCGCGGTA CGAACCGTCA 649,490 0.0595
10 GATCGGGTAA CGGAACCGTC 487,765 0.0447
11 GACGCGGTAA CGGAACCGTC 394,410 0.0361
12 GATCGCGGGT CGGAACCGTC 367,907 0.0337
13 GTCGCGGTAA CGGAACCGTC 309,226 0.0283
14 GATCGCGGTA CGGAAACCGT 308,780 0.0283
15 GATCGCGGTA CGGAACCGCA 303,378 0.0278
16 GATCGCGGTA CGGAACCTCA 272,773 0.0250
17 GATCGCGGTA CGGGAACCGT 264,935 0.0243
18 GATCGCCGGT CGGAACCGTC 231,599 0.0212
19 GATTCGCGGT CGGAACCGTC 192,987 0.0177
20 GATCGCGGTA CGGAACCCGT 170,624 0.0156
21 GATCGCGGTA CCGGAACCGT 168,560 0.0154
22 CGATCGCGGT CGGAACCGTC 155,017 0.0142
23 GATCGCGGGG CGGAACCGTC 154,451 0.0141
24 GATCCGCGGT CGGAACCGTC 150,104 0.0137
25 GATCGGCGGT CGGAACCGTC 132,585 0.0121
26 GATCGCGGTA CGGAACCGGT 128,233 0.0117
27 GGATCGCGGT CGGAACCGTC 116,709 0.0107
28 GGGGGGGGGG CGGAACCGTC 98,522 0.0090
29 GAATCGCGGT CGGAACCGTC 86,897 0.0080
30 GATCGCGGTA CGGACCCTCA 85,152 0.0078
31 GATCGGTAAT CGGAACCGTC 57,746 0.0053
32 GATCGCGGTA CGGAACCCCC 50,993 0.0047
33 GATCGCGGTA GGAACCGTTA 45,406 0.0042
34 TGTGTCGACA TGTCTGCCTG 43,223 0.0040
35 GATCCCGTAA CGGAACCGTC 41,054 0.0038
36 GATCGCGGTA CGGAACCTTA 37,985 0.0035
37 GATCGCGGTA CGGAACGTTA 31,004 0.0028
38 GAGCGCGGGA CGGAACCGTC 29,079 0.0027
39 GATCGCGGTA CGAACCCTCA 26,837 0.0025
40 GATCGCGGTA CGAACCCTTA 26,386 0.0024
41 GATCGCGGTA CGGACCCCTC 26,336 0.0024
42 GATCGCGGGC CGGAACCGTC 25,260 0.0023
43 CACCGCTCGT ACGAGAGTCT 24,777 0.0023
44 TGTGTCGACA TGTATGACTG 24,716 0.0023
45 GTCGCCGTAA CGGAACCGTC 23,550 0.0022
46 CACCGCTCGT ACGAGCGTCT 23,426 0.0021
47 GATCGCGGTA CGGGAACCTT 23,406 0.0021
48 GATCGCGGTA CGGACCCTTC 21,674 0.0020
49 GATCGCGGTA CCGGACCCTC 20,758 0.0019
50 GGGGGGGGTG CGGAACCGTC 20,276 0.0019
51 TGTGTCGACA TGGCTGACTG 19,908 0.0018
52 GATCGCGAAT CGGAACCGTC 19,354 0.0018
53 GACGCCGTAA CGGAACCGTC 18,829 0.0017
54 GATCGCGGTA CGGACCCTTA 18,627 0.0017
55 GATCGCGGTA CGAACCGTTA 18,341 0.0017
56 GCTCGCGGTC CGGAACCGTC 18,225 0.0017
57 GATCGCTAAT CGGAACCGTC 17,874 0.0016
58 NATCGCGGNA NGGAACCGTC 17,253 0.0016
59 GATCGCGGAT CGGAACCGTC 17,137 0.0016
60 ATCGCCGTAA CGGAACCGTC 16,353 0.0015
61 GGGGGCGGGG CGGAACCGTC 15,432 0.0014
62 GATGCCGTAA CGGAACCGTC 15,194 0.0014
63 GATCGCGGTA CGGAACCCTT 14,756 0.0014
64 GATCGCGGTA CCGGAACCTT 14,262 0.0013
65 GGGCGCGGTA CGGAACCGTC 14,177 0.0013
66 GATCGTAATC CGGAACCGTC 13,949 0.0013
67 GATCGCGGTA CGGACGTCAC 13,929 0.0013
68 GATCGCGGTA CGGAAACCTT 13,872 0.0013
69 GAGCGCGGGG CGGAACCGTC 13,635 0.0012
70 GATCTCGTAT CGGAACCGTC 13,443 0.0012
71 GNTNGCGGTA CGGAACCGTC 13,389 0.0012
72 GATCGCGGTA GGAACCCTTA 13,235 0.0012
73 GCGGTAATCT CGGAACCGTC 13,005 0.0012
74 GGGCGCGGGG CGGAACCGTC 12,676 0.0012
75 GATCGCGGTA NGGANCCGTC 12,542 0.0011
76 GGTAATCTCG CGGAACCGTC 12,536 0.0011
77 GATCGCGGTA CGGAACCTCC 12,444 0.0011
78 TCGCGGTAAT CGGAACCGTC 11,933 0.0011
79 GATCGCGGTA CCGAACCCTC 11,659 0.0011
80 GATCGCGGTA CCGGACCCCC 11,623 0.0011
81 GATCGCGGTA CGGAACGTCC 11,406 0.0010
82 GATCGCGGTA CGGAACTCAC 11,390 0.0010
83 NATCGCGGTA NGGANCCGTC 10,302 0.0009
84 CACAGATCGT ACGAAAGTTT 10,189 0.0009
85 GATCCGTAAT CGGAACCGTC 10,125 0.0009
86 GAGCGGTAAT CGGAACCGTC 10,093 0.0009
87 GATCGCGGTA CGGGACCCTC 9,611 0.0009
88 GCGCGGTAAT CGGAACCGTC 9,518 0.0009
89 GATCGCGGTA CGACCGTCAC 9,154 0.0008
90 GATCGCGGTA CGGAACCCAC 8,811 0.0008
91 GATCGCCGGA CGGAACCGTC 8,546 0.0008
92 GATCGCGGTA CGGAACGTAC 8,331 0.0008
93 GGGCGCGGTG CGGAACCGTC 8,134 0.0007
94 GGGCGCGGGA CGGAACCGTC 7,653 0.0007
95 GATCGCGATC CGGAACCGTC 7,389 0.0007
96 GAGCGCGGGA CGGAACCGGC 7,350 0.0007
97 GATCGCGGTA GAACCGTCAC 7,242 0.0007
98 GATCGCGTAT CGGAACCGTC 6,733 0.0006
99 ATTTCGCGAG CTAGCTCGTA 5,733 0.0005
100 GNTNGCGGTA CGGNACCGTC 5,117 0.0005
101 GATCGCGGTA CGGACCCCCC 4,873 0.0004
102 GGTCGCGGTG CGGAACCGTC 4,726 0.0004
103 NNGTCGCTAG CTAGCTCGTA 4,166 0.0004
104 GATNGCGNTA CGGNACCGTC 3,926 0.0004
105 GATCGCGGTA CGGAAACCTC 3,341 0.0003
106 GCTCGCGGGG CGGAACCGTC 3,179 0.0003
42.3
Mean Q
96.7%
Q30
86.4%
Q40
N/A
Reads eliminated
29.0
Mean read length
N/A
Trim type
N/A
Min read length