aviti0648B
Run Name
150 + 150
Lane 1 (R1 + R2)
150 + 150
Lane 2 (R1 + R2)
986,087,298
Polonies
80.9%
Q30
81.1%
Index Assignment
239.800
Assigned Yield (Gb)
10 + 10
Lane 1 (I1 + I2)
10 + 10
Lane 2 (I1 + I2)
0.27%
Unexpected Pairs
Index Percentiles
Percentile Sample I1 I2 Polonies % Polonies
5th Adept_CB3 GCACATAGTC GACTACTAGC 1,016,422 0.1031
50th CCDO4_128_CC2 ACTCGGCAAT GACAACTGAA 13,817,739 1.4013
95th KT03 CCACCAGGCA CTTATGGAAT 28,898,990 2.9307
All Indices
# Sample I1 I2 Polonies % Polonies
1 KT05 ACAGTGTATG GAACATACGG 32,125,003 3.2578
2 KT04 GTGACACGCA GCTTACGGAC 31,530,323 3.1975
3 KT03 CCACCAGGCA CTTATGGAAT 28,898,990 2.9307
4 TS13 TGGCTAATCA AGGCATGTAG 28,658,374 2.9063
5 TS02 GACACCATGT TCAACGTGTA 27,306,147 2.7691
6 KT02 GCCGCACTCT TCCGACCTCG 26,816,361 2.7195
7 KT06 TGATTATACG GTCGATTACA 26,572,779 2.6948
8 TS14 AACACTGTTA GCAAGTCTCA 26,109,341 2.6478
9 KT01 ACCACGACAT TCGTATGCGG 24,058,827 2.4398
10 TS03 CCTGTCTGTC ACTGTTGTGA 22,462,940 2.2780
11 TS11 CTGTTGGTCC ATAGACCGTT 21,897,465 2.2206
12 TS07 TAGCATAACC GCTATGCGCA 19,941,017 2.0222
13 TS05 TAGTTCGGTA CCATGTGTAG 19,031,254 1.9300
14 TS06 CTATTACTAC GAGTCTCTCC 18,143,118 1.8399
15 TS12 TTACCTGGAA ACAGTTCCAG 17,921,062 1.8174
16 CC8_049_BO1 GGAGCGTGTA ATCCGTAAGT 17,909,300 1.8162
17 TS04 TGATGTAAGA GTGCGTCCTT 17,760,364 1.8011
18 CC8_128_DC1 CAGCCGCGTA ACTAGCCGTG 17,268,346 1.7512
19 TS08 ACTCTATTGT ATCGCATATG 17,249,261 1.7493
20 CC8_128_DC3 ACCGGCCGTA TGGCAATATT 16,680,370 1.6916
21 TS10 CTCGCTTCGG TACTAGTCAA 15,945,313 1.6170
22 CC8_049_BO3 GGCAAGCCAG CAAGCATCCG 15,925,498 1.6150
23 CC8_128_DC2 GGTAACTCGC AAGTTGGTGA 15,063,573 1.5276
24 TS09 TCTATCCTAA CGTCGACTGG 14,366,403 1.4569
25 CC8_128_DO2 GTGCAGACAG TACCATCCGT 14,148,213 1.4348
26 CCDO4_128_CC2 ACTCGGCAAT GACAACTGAA 13,817,739 1.4013
27 CCDO4_128_CC3 GTCTAATGGC AGTGGTCAGG 13,741,406 1.3935
28 CC8_049_AC1 TCTCATGATA AACACGTGGA 13,664,885 1.3858
29 CC8_128_DO34 CAATCGGCTG GCTGTAGGAA 13,249,277 1.3436
30 CC8_049_BC2 TCTGGTATCC CGTTGCTTAC 13,213,910 1.3400
31 CCDO4_128_CC1 TATGTAGTCA CGCACTAATG 13,162,489 1.3348
32 CC8_049_BO2 ACGGTCAGGA CGGCCTCGTT 13,104,834 1.3290
33 CC8_049_CO1 TGGTACCTAA CATGAGTACT 12,848,687 1.3030
34 CC8_049_CO2 TTGGAATTCC ACGTCAATAC 12,689,991 1.2869
35 CC8_049_AO1 ACTGGATCTA TCGCCGCTAG 12,685,621 1.2865
36 CC8_049_AO2 GTCCGTAAGC CGTGTATCTT 12,338,068 1.2512
37 CC8_049_CC2 ACCGTTACAA CTCATAGCGA 11,979,581 1.2149
38 CC8_049_AC3 TTCACGAGAC AGATTGTTAC 11,805,717 1.1972
39 CC8_049_CC1 TGTCGCTGGT TCGTCTGACT 11,742,740 1.1908
40 CC8_049_CC3 TATGCCTTAC AGACACATTA 11,508,251 1.1671
41 CC8_049_CO3 CCTCTACATG GATACCTCCT 11,209,270 1.1367
42 CC8_049_AO3 ACTTCAAGCG GAACCATGAA 11,197,757 1.1356
43 CC8_049_AC2 CGAGGCCAAG GTGTTACCGG 10,819,804 1.0972
44 CC8_049_BC3 CATTAGTGCG TGACTACATA 10,211,665 1.0356
45 CC8_128_DO1 TGTAATCGAC GATCACCGCG 10,184,377 1.0328
46 CC8_049_BC1 GCGTGGATGG TTGACCAATG 9,376,827 0.9509
47 TS01 AGTGTTGCAC CTGGTACACG 6,960,174 0.7058
48 Adept_CB1 ATGTCGCTAG CTAGCTCGTA 1,239,926 0.1257
49 Adept_CB3 GCACATAGTC GACTACTAGC 1,016,422 0.1031
50 Adept_CB4 TGTGTCGACA TGTCTGACAG 987,880 0.1002
51 Adept_CB2 CACAGATCGT ACGAGAGTCT 928,578 0.0942
Top Unassigned Sequences
# I1 I2 Polonies % Polonies
1 TGGCTAATCA AGGCATTTAA 117,900 0.0120
2 ACAGTGTATG AAACATACAG 109,882 0.0111
3 ACCACGACAT TCGTATGCAA 99,030 0.0100
4 TGATTATACG ATAGATTACA 98,461 0.0100
5 ACAGTGTATG AAACATACGA 98,346 0.0100
6 ACCACGACAT TCATATGCGA 95,829 0.0097
7 ACAGTGTATG GAACATACAA 81,961 0.0083
8 GTCTAATGGC AGTGATTAGG 80,381 0.0082
9 GGCAGCCAGA CAAGCATCCG 80,003 0.0081
10 GCAAGCCAGA CAAGCATCCG 75,756 0.0077
11 CTATTACTAC GAGTATCTCA 71,409 0.0072
12 ACTCTATTTA ATCGCATATG 64,858 0.0066
13 TGGCTAATCA AGACATGTAA 62,469 0.0063
14 GTGACACGCA ACTTACGAAC 57,378 0.0058
15 AACACTGTTA ACAAATCTCA 55,207 0.0056
16 TGATTATACG ATTGATTACA 55,041 0.0056
17 TGGCTAATCA AAGCATGTAA 44,461 0.0045
18 CTATTACTAC AAGTCTCTCA 43,574 0.0044
19 ACCACGACAT TCATATGCAG 40,475 0.0041
20 TGGCTAATCA AGACATTTAG 40,293 0.0041
21 GTGACACGCA ACTTACGGAA 37,251 0.0038
22 GGCAACCAGA CAAGCATCCG 35,648 0.0036
23 TCTGGTATAT CGTTGCTTAC 35,277 0.0036
24 AATCGGCTGA GCTGTAGGAA 32,596 0.0033
25 TACCTGGAAA ACAGTTCCAG 27,849 0.0028
26 TCTAATGGCA AGTGGTCAGG 26,875 0.0027
27 TGATTATACG ATCAATTACA 25,585 0.0026
28 ATCTATTGTA ATCGCATATG 25,219 0.0026
29 GGCAAGCAGA CAAGCATCCG 24,602 0.0025
30 TCTATCCTAA CATCAACTGG 12,164 0.0012
31 GTTAATGGCA AGTGGTCAGG 11,484 0.0012
37.8
Mean Q
81.3%
Q30
70.2%
Q40
N/A
Reads eliminated
150.0
Mean read length
N/A
Trim type
N/A
Min read length