aviti0498B
Run Name
73 + 73
Lane 1 (R1 + R2)
73 + 73
Lane 2 (R1 + R2)
884,210,098
Polonies
95.7%
Q30
93.3%
Index Assignment
120.418
Assigned Yield (Gb)
8 + 8
Lane 1 (I1 + I2)
8 + 8
Lane 2 (I1 + I2)
0.99%
Unexpected Pairs
Index Percentiles
Percentile Sample I1 I2 Polonies % Polonies
5th Adept_CB2 ACGATCTG ACGAGAGT 0 0.0000
50th A6 AGGCAGAA AAGGAGTA 6,403,072 0.7242
95th BULK_A1_2 ATCCACTG AGGTGCGT 52,476,349 5.9348
All Indices
# Sample I1 I2 Polonies % Polonies
1 BULK_S1_1 AAGTCCAA TATGAGTA 461,098,211 52.1480
2 BULK_A1_2 ATCCACTG AGGTGCGT 52,476,349 5.9348
3 BULK_A5_2 CAAGCTAG ACATAGCG 39,291,425 4.4437
4 BULK_A1_1 CCGCGGTT AGCGCTAG 32,023,787 3.6217
5 BULK_S1_2 TGGATCGA GTGCGATA 23,815,216 2.6934
6 BULK_A5_1 GGACTTGG CGCAGACG 18,703,186 2.1152
7 BULK_A2_1 TTATAACC GATATCGA 17,974,461 2.0328
8 BULK_A2_2 GCTTGTCA GAACATAC 17,328,433 1.9598
9 B2PLUS GCTCATGA AAGGAGTA 12,170,159 1.3764
10 B2 GCTCATGA CTAAGCCT 12,111,958 1.3698
11 B3PLUS GCTCATGA GTAAGGAG 10,343,155 1.1698
12 B3 GCTCATGA ACTGCATA 9,560,663 1.0813
13 B1PLUS GCTCATGA CGTCTAAT 9,160,345 1.0360
14 B1 GCTCATGA TCTCTCCG 8,745,136 0.9890
15 A5PLUS AGGCAGAA ACTGCATA 6,856,703 0.7755
16 A4 AGGCAGAA CTCTCTAT 6,756,546 0.7641
17 A2 CGTACTAG GTAAGGAG 6,604,245 0.7469
18 A4PLUS AGGCAGAA TATCCTCT 6,600,008 0.7464
19 A6 AGGCAGAA AAGGAGTA 6,403,072 0.7242
20 A3 CGTACTAG AAGGAGTA 6,292,772 0.7117
21 A1PLUS CGTACTAG TATCCTCT 6,261,718 0.7082
22 A1 CGTACTAG CTCTCTAT 6,138,940 0.6943
23 A6PLUS AGGCAGAA CTAAGCCT 5,912,804 0.6687
24 A2PLUS CGTACTAG ACTGCATA 5,841,118 0.6606
25 A5 AGGCAGAA GTAAGGAG 5,741,125 0.6493
26 S1 ATCTCAGG CTCTCTAT 5,534,870 0.6260
27 A3PLUS CGTACTAG CTAAGCCT 5,283,122 0.5975
28 S2 ATCTCAGG GTAAGGAG 4,703,414 0.5319
29 S3PLUS ATCTCAGG CTAAGCCT 4,502,774 0.5092
30 S3 ATCTCAGG AAGGAGTA 4,433,282 0.5014
31 S1PLUS ATCTCAGG TATCCTCT 3,250,821 0.3677
32 S2PLUS ATCTCAGG ACTGCATA 2,931,760 0.3316
33 Adept_CB4 TGTCGACA TGTCTGAC 367 0.0000
34 Adept_CB1 CTAGCGAC CTAGCTCG 0 0.0000
35 Adept_CB2 ACGATCTG ACGAGAGT 0 0.0000
36 Adept_CB3 GACTATGT GACTACTA 0 0.0000
Top Unassigned Sequences
# I1 I2 Polonies % Polonies
1 ATGTCGCT CTAGCTCG 3,891,950 0.4402
2 ATCCACTG AGGTGCTT 3,863,879 0.4370
3 TGTGTCGA TGTCTGAC 3,831,839 0.4334
4 CACAGATC ACGAGAGT 3,551,740 0.4017
5 GCACATAG GACTACTA 2,940,334 0.3325
6 ATCCACTG AGGTACTT 1,383,166 0.1564
7 ATCCACTG TATGAGTA 1,203,322 0.1361
8 ATCCACTG AGGTACGT 1,028,375 0.1163
9 AAGTCCAA AGGTGCGT 1,005,618 0.1137
10 ATCCACTG AGGTGCCT 768,568 0.0869
11 CAAGCTAG TATGAGTA 695,088 0.0786
12 AAGTCCAA ACATAGCG 588,550 0.0666
13 ATCCACTG AGGTGCAT 562,989 0.0637
14 CCGCGGTT TATGAGTA 535,171 0.0605
15 AAGTCCAA AGCGCTAG 505,145 0.0571
16 TGGATCGA TATGAGTA 434,270 0.0491
17 AAGTCCAA GTGCGATA 419,097 0.0474
18 AAGCCCAA TATGAGTA 387,096 0.0438
19 AAGTCCAA GATATCGA 365,700 0.0414
20 TTATAACC TATGAGTA 341,247 0.0386
21 AAGTCCAA AATGAGTA 339,656 0.0384
22 AAGTCCAA TATGAATA 336,116 0.0380
23 GCTTGTCA TATGAGTA 321,197 0.0363
24 AAGTCCAA GAACATAC 301,458 0.0341
25 GGACTTGG TATGAGTA 274,636 0.0311
26 TGGATCGA GTGCAATA 259,043 0.0293
27 CCGCGGTA AGCGCTAG 257,610 0.0291
28 ATCCACTG AAGTACTT 249,249 0.0282
29 AAGTCCAA CGCAGACG 228,493 0.0258
30 CCGCGGTT AGCGCGAG 80,146 0.0091
31 GCTCATGA GTAAGGAA 67,600 0.0076
42.5
Mean Q
95.9%
Q30
87.2%
Q40
N/A
Reads eliminated
N/A
Mean read length
N/A
Trim type
N/A
Min read length