H2KTNAFX2 / [all projects] / [all samples] / [all barcodes]

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Flowcell Summary

Clusters (Raw) Clusters(PF) Yield (MBases)
223,625,983 187,444,375 28,492

Lane Summary

Lane Project Sample Barcode sequence PF Clusters % of the
lane		 % Perfect
barcode		 % One mismatch
barcode		 Yield (Mbases) % PF
Clusters		 % >= Q30
bases		 Mean Quality
Score
1 default Undetermined unknown 3,199,037 6.65 100.00 NaN 486 26.33 70.23 29.20
1 pgl_B030320_postCap_pool B022920A1_AV170 CAGTACT+ATACAGA 207,040 0.43 100.00 NaN 31 100.00 91.88 33.93
1 pgl_B030320_postCap_pool B022920A2_AV175 CATCCGG+TGCTACG 242,909 0.51 100.00 NaN 37 100.00 91.42 33.83
1 pgl_B030320_postCap_pool B022920A3_AV183 CGCGCAG+ATACAGA 231,058 0.48 100.00 NaN 35 100.00 90.32 33.59
1 pgl_B030320_postCap_pool B022920A4_AV179 TCATGGT+AACGTAT 159,189 0.33 100.00 NaN 24 100.00 88.86 33.28
1 pgl_B030320_postCap_pool B022920A4_AV186 ACTGGAC+CATACTG 257,008 0.53 100.00 NaN 39 100.00 91.30 33.80
1 pgl_B030320_postCap_pool B022920A4_AV78 TGACGTC+AGGATTC 164,974 0.34 100.00 NaN 25 100.00 91.03 33.75
1 salama_pooled-RNAseq-3-9-2020-SS bulkCA_r1 CACAGTA+CTCTAGT 21,379,213 44.45 100.00 NaN 3,250 100.00 91.03 33.74
1 salama_pooled-RNAseq-3-9-2020-SS bulkCA_r1_UDI65_1 CACAGTA+GGGGGGG 89,197 0.19 100.00 NaN 14 100.00 90.49 33.62
1 salama_pooled-RNAseq-3-9-2020-SS bulkCA_r1_UDI65_2 TGCGAGA+CTCTAGT 73,722 0.15 100.00 NaN 11 100.00 91.80 33.90
1 salama_pooled-RNAseq-3-9-2020-SS bulkCA_r1_UDI65_3 GGGGGGG+CTCTAGT 62,621 0.13 100.00 NaN 10 100.00 89.80 33.49
1 salama_pooled-RNAseq-3-9-2020-SS bulkCA_r1_UDI65_4 CACAGTA+CGCTAGT 50,424 0.10 100.00 NaN 8 100.00 76.84 30.75
1 salama_pooled-RNAseq-3-9-2020-SS bulkCA_r1_UDI65_5 CACAGTA+NTCTAGT 37,447 0.08 100.00 NaN 6 100.00 90.45 33.60
1 salama_pooled-RNAseq-3-9-2020-SS bulkW5_r1 AATCGTT+ACGTTAT 105,401 0.22 100.00 NaN 16 100.00 90.00 33.53
1 salama_pooled-RNAseq-3-9-2020-SS bulkW9_r1 AAGAAGC+TTATCTA 13,805,654 28.70 100.00 NaN 2,098 100.00 90.95 33.71
1 salama_pooled-RNAseq-3-9-2020-SS exoGlio4 GAAGCAC+GCCAGAG 2,482,219 5.16 100.00 NaN 377 100.00 89.49 33.41
1 salama_pooled-RNAseq-3-9-2020-SS exoW8_r2 GTCTACA+TTCAAGA 2,801,855 5.83 100.00 NaN 426 100.00 83.98 32.27
1 salama_pooled-RNAseq-3-9-2020-SS exoW9_r2 GATTCCT+TGCCTAT 2,580,652 5.37 100.00 NaN 392 100.00 83.30 32.13
1 salama_pooled-RNAseq-3-9-2020-SS exoW9_r2_UDI33_1 AAGAAGC+GGGGGGG 68,145 0.14 100.00 NaN 10 100.00 90.10 33.53
1 salama_pooled-RNAseq-3-9-2020-SS exoW9_r2_UDI33_2 GGGGGGG+TTATCTA 49,993 0.10 100.00 NaN 8 100.00 89.76 33.47
1 salama_pooled-RNAseq-3-9-2020-SS exoW9_r2_UDI33_3 AAGCAGC+TTATCTA 48,334 0.10 100.00 NaN 7 100.00 78.75 31.17
2 default Undetermined unknown 3,746,573 8.07 100.00 NaN 569 30.51 68.15 28.78
2 pgl_B030320_postCap_pool B022920A1_AV170 CAGTACT+ATACAGA 191,339 0.41 100.00 NaN 29 100.00 92.13 33.98
2 pgl_B030320_postCap_pool B022920A2_AV175 CATCCGG+TGCTACG 224,632 0.48 100.00 NaN 34 100.00 91.56 33.85
2 pgl_B030320_postCap_pool B022920A3_AV183 CGCGCAG+ATACAGA 214,061 0.46 100.00 NaN 33 100.00 90.47 33.62
2 pgl_B030320_postCap_pool B022920A4_AV179 TCATGGT+AACGTAT 142,816 0.31 100.00 NaN 22 100.00 89.34 33.37
2 pgl_B030320_postCap_pool B022920A4_AV186 ACTGGAC+CATACTG 234,936 0.51 100.00 NaN 36 100.00 91.56 33.86
2 pgl_B030320_postCap_pool B022920A4_AV78 TGACGTC+AGGATTC 152,182 0.33 100.00 NaN 23 100.00 91.23 33.79
2 salama_pooled-RNAseq-3-9-2020-SS bulkCA_r1 CACAGTA+CTCTAGT 20,379,619 43.92 100.00 NaN 3,098 100.00 91.13 33.76
2 salama_pooled-RNAseq-3-9-2020-SS bulkCA_r1_UDI65_1 CACAGTA+GGGGGGG 59,646 0.13 100.00 NaN 9 100.00 86.86 32.87
2 salama_pooled-RNAseq-3-9-2020-SS bulkCA_r1_UDI65_2 TGCGAGA+CTCTAGT 69,187 0.15 100.00 NaN 11 100.00 91.88 33.92
2 salama_pooled-RNAseq-3-9-2020-SS bulkCA_r1_UDI65_3 GGGGGGG+CTCTAGT 71,526 0.15 100.00 NaN 11 100.00 88.97 33.32
2 salama_pooled-RNAseq-3-9-2020-SS bulkCA_r1_UDI65_4 CACAGTA+CGCTAGT 54,076 0.12 100.00 NaN 8 100.00 77.04 30.79
2 salama_pooled-RNAseq-3-9-2020-SS bulkCA_r1_UDI65_5 CACAGTA+NTCTAGT 26,469 0.06 100.00 NaN 4 100.00 90.99 33.71
2 salama_pooled-RNAseq-3-9-2020-SS bulkW5_r1 AATCGTT+ACGTTAT 99,107 0.21 100.00 NaN 15 100.00 90.25 33.58
2 salama_pooled-RNAseq-3-9-2020-SS bulkW9_r1 AAGAAGC+TTATCTA 13,151,081 28.34 100.00 NaN 1,999 100.00 91.09 33.75
2 salama_pooled-RNAseq-3-9-2020-SS exoGlio4 GAAGCAC+GCCAGAG 2,346,872 5.06 100.00 NaN 357 100.00 89.82 33.48
2 salama_pooled-RNAseq-3-9-2020-SS exoW8_r2 GTCTACA+TTCAAGA 2,628,322 5.66 100.00 NaN 400 100.00 84.36 32.35
2 salama_pooled-RNAseq-3-9-2020-SS exoW9_r2 GATTCCT+TGCCTAT 2,410,263 5.19 100.00 NaN 366 100.00 83.90 32.26
2 salama_pooled-RNAseq-3-9-2020-SS exoW9_r2_UDI33_1 AAGAAGC+GGGGGGG 44,002 0.09 100.00 NaN 7 100.00 87.62 33.02
2 salama_pooled-RNAseq-3-9-2020-SS exoW9_r2_UDI33_2 GGGGGGG+TTATCTA 60,702 0.13 100.00 NaN 9 100.00 88.98 33.31
2 salama_pooled-RNAseq-3-9-2020-SS exoW9_r2_UDI33_3 AAGCAGC+TTATCTA 93,509 0.20 100.00 NaN 14 100.00 77.92 30.98
3 default Undetermined unknown 3,014,436 6.35 100.00 NaN 458 24.96 70.34 29.30
3 pgl_B030320_postCap_pool B022920A1_AV170 CAGTACT+ATACAGA 202,720 0.43 100.00 NaN 31 100.00 92.03 33.96
3 pgl_B030320_postCap_pool B022920A2_AV175 CATCCGG+TGCTACG 233,459 0.49 100.00 NaN 35 100.00 91.54 33.85
3 pgl_B030320_postCap_pool B022920A3_AV183 CGCGCAG+ATACAGA 222,194 0.47 100.00 NaN 34 100.00 90.43 33.61
3 pgl_B030320_postCap_pool B022920A4_AV179 TCATGGT+AACGTAT 152,252 0.32 100.00 NaN 23 100.00 89.14 33.33
3 pgl_B030320_postCap_pool B022920A4_AV186 ACTGGAC+CATACTG 247,859 0.52 100.00 NaN 38 100.00 91.47 33.84
3 pgl_B030320_postCap_pool B022920A4_AV78 TGACGTC+AGGATTC 159,212 0.34 100.00 NaN 24 100.00 91.16 33.77
3 salama_pooled-RNAseq-3-9-2020-SS bulkCA_r1 CACAGTA+CTCTAGT 21,252,987 44.74 100.00 NaN 3,230 100.00 91.24 33.78
3 salama_pooled-RNAseq-3-9-2020-SS bulkCA_r1_UDI65_1 CACAGTA+GGGGGGG 85,740 0.18 100.00 NaN 13 100.00 90.92 33.72
3 salama_pooled-RNAseq-3-9-2020-SS bulkCA_r1_UDI65_2 TGCGAGA+CTCTAGT 72,922 0.15 100.00 NaN 11 100.00 92.00 33.95
3 salama_pooled-RNAseq-3-9-2020-SS bulkCA_r1_UDI65_3 GGGGGGG+CTCTAGT 60,003 0.13 100.00 NaN 9 100.00 90.00 33.53
3 salama_pooled-RNAseq-3-9-2020-SS bulkCA_r1_UDI65_4 CACAGTA+CGCTAGT 48,964 0.10 100.00 NaN 7 100.00 78.13 31.02
3 salama_pooled-RNAseq-3-9-2020-SS bulkCA_r1_UDI65_5 CACAGTA+NTCTAGT 21,789 0.05 100.00 NaN 3 100.00 91.01 33.66
3 salama_pooled-RNAseq-3-9-2020-SS bulkW5_r1 AATCGTT+ACGTTAT 103,643 0.22 100.00 NaN 16 100.00 90.29 33.59
3 salama_pooled-RNAseq-3-9-2020-SS bulkW9_r1 AAGAAGC+TTATCTA 13,726,870 28.89 100.00 NaN 2,086 100.00 91.17 33.76
3 salama_pooled-RNAseq-3-9-2020-SS exoGlio4 GAAGCAC+GCCAGAG 2,457,007 5.17 100.00 NaN 373 100.00 89.69 33.46
3 salama_pooled-RNAseq-3-9-2020-SS exoW8_r2 GTCTACA+TTCAAGA 2,751,884 5.79 100.00 NaN 418 100.00 84.21 32.32
3 salama_pooled-RNAseq-3-9-2020-SS exoW9_r2 GATTCCT+TGCCTAT 2,532,695 5.33 100.00 NaN 385 100.00 83.86 32.25
3 salama_pooled-RNAseq-3-9-2020-SS exoW9_r2_UDI33_1 AAGAAGC+GGGGGGG 67,161 0.14 100.00 NaN 10 100.00 90.68 33.66
3 salama_pooled-RNAseq-3-9-2020-SS exoW9_r2_UDI33_2 GGGGGGG+TTATCTA 48,873 0.10 100.00 NaN 7 100.00 90.02 33.53
3 salama_pooled-RNAseq-3-9-2020-SS exoW9_r2_UDI33_3 AAGCAGC+TTATCTA 45,254 0.10 100.00 NaN 7 100.00 80.76 31.59
4 default Undetermined unknown 6,927,287 15.25 100.00 NaN 1,053 41.82 62.09 27.45
4 pgl_B030320_postCap_pool B022920A1_AV170 CAGTACT+ATACAGA 175,963 0.39 100.00 NaN 27 100.00 91.28 33.79
4 pgl_B030320_postCap_pool B022920A2_AV175 CATCCGG+TGCTACG 201,259 0.44 100.00 NaN 31 100.00 90.79 33.68
4 pgl_B030320_postCap_pool B022920A3_AV183 CGCGCAG+ATACAGA 198,308 0.44 100.00 NaN 30 100.00 89.34 33.37
4 pgl_B030320_postCap_pool B022920A4_AV179 TCATGGT+AACGTAT 128,722 0.28 100.00 NaN 20 100.00 88.38 33.17
4 pgl_B030320_postCap_pool B022920A4_AV186 ACTGGAC+CATACTG 216,139 0.48 100.00 NaN 33 100.00 90.56 33.64
4 pgl_B030320_postCap_pool B022920A4_AV78 TGACGTC+AGGATTC 136,909 0.30 100.00 NaN 21 100.00 90.48 33.62
4 salama_pooled-RNAseq-3-9-2020-SS bulkCA_r1 CACAGTA+CTCTAGT 18,374,560 40.44 100.00 NaN 2,793 100.00 90.06 33.52
4 salama_pooled-RNAseq-3-9-2020-SS bulkCA_r1_UDI65_1 CACAGTA+GGGGGGG 55,851 0.12 100.00 NaN 8 100.00 86.42 32.77
4 salama_pooled-RNAseq-3-9-2020-SS bulkCA_r1_UDI65_2 TGCGAGA+CTCTAGT 62,440 0.14 100.00 NaN 9 100.00 90.82 33.69
4 salama_pooled-RNAseq-3-9-2020-SS bulkCA_r1_UDI65_3 GGGGGGG+CTCTAGT 64,827 0.14 100.00 NaN 10 100.00 87.63 33.03
4 salama_pooled-RNAseq-3-9-2020-SS bulkCA_r1_UDI65_4 CACAGTA+CGCTAGT 79,485 0.17 100.00 NaN 12 100.00 76.35 30.53
4 salama_pooled-RNAseq-3-9-2020-SS bulkCA_r1_UDI65_5 CACAGTA+NTCTAGT 4,533 0.01 100.00 NaN 1 100.00 88.02 32.94
4 salama_pooled-RNAseq-3-9-2020-SS bulkW5_r1 AATCGTT+ACGTTAT 88,412 0.19 100.00 NaN 13 100.00 89.36 33.39
4 salama_pooled-RNAseq-3-9-2020-SS bulkW9_r1 AAGAAGC+TTATCTA 11,867,936 26.12 100.00 NaN 1,804 100.00 89.92 33.49
4 salama_pooled-RNAseq-3-9-2020-SS exoGlio4 GAAGCAC+GCCAGAG 2,093,560 4.61 100.00 NaN 318 100.00 88.88 33.28
4 salama_pooled-RNAseq-3-9-2020-SS exoW8_r2 GTCTACA+TTCAAGA 2,386,884 5.25 100.00 NaN 363 100.00 83.39 32.13
4 salama_pooled-RNAseq-3-9-2020-SS exoW9_r2 GATTCCT+TGCCTAT 2,160,914 4.76 100.00 NaN 328 100.00 83.09 32.08
4 salama_pooled-RNAseq-3-9-2020-SS exoW9_r2_UDI33_1 AAGAAGC+GGGGGGG 40,418 0.09 100.00 NaN 6 100.00 87.35 32.96
4 salama_pooled-RNAseq-3-9-2020-SS exoW9_r2_UDI33_2 GGGGGGG+TTATCTA 55,384 0.12 100.00 NaN 8 100.00 87.64 33.02
4 salama_pooled-RNAseq-3-9-2020-SS exoW9_r2_UDI33_3 AAGCAGC+TTATCTA 119,648 0.26 100.00 NaN 18 100.00 77.91 30.98

Top Unknown Barcodes

Lane Count Sequence Lane Count Sequence Lane Count Sequence Lane Count Sequence
1 173,220 GGGGGGG+GGGGGGG 2 275,360 GGGGGGG+GGGGGGG 3 139,400 GGGGGGG+GGGGGGG 4 1,237,500 GGGGGGG+GGGGGGG
41,780 GATCTCG+ATACAGA 48,000 CCCAGTA+CTCTAGT 40,220 GATCTCG+ATACAGA 127,360 CCCAGTA+CTCTAGT
37,360 AAGAAGC+TATCTAC 38,880 GATCTCG+ATACAGA 36,640 AAGAAGC+TATCTAC 46,000 CACAGTA+CTCGAGT
32,640 CCCAGTA+CTCTAGT 37,940 CACAGTA+CTCGAGT 31,560 AACAAGC+TTATCTA 41,400 CCCCGTA+CTCTAGT
32,440 CACAGTA+CTCGAGT 34,280 AACAAGC+TTATCTA 29,460 CACAGTA+CTCGAGT 35,940 GACGCAC+GCCAGAG
30,980 AACAAGC+TTATCTA 32,780 AAGAAGC+TATCTAC 29,460 AACAATA+ATATATA 34,980 GATCTCG+ATACAGA
28,120 CACACTA+CTCTAGT 28,760 AACAATA+ATATATA 27,840 CCCAGTA+CTCTAGT 31,760 AACAAGC+TTATCTA
26,560 AACAATA+ATATATA 25,380 CACACTA+CTCTAGT 26,660 CACACTA+CTCTAGT 30,800 AAGAAGC+TATCTAC
24,920 AAGAAGC+NTATCTA 23,420 CACAGAA+CTCTAGT 25,160 CACAGTA+CTCTAGA 27,560 CACACTA+CTCTAGT
23,680 CACAGAA+CTCTAGT 22,560 CACAGTA+CTCTAGA 22,700 CACAGTA+CTCTAGG 27,400 ACGCAGC+TTATCTA