# Counts of guide/barcode lines extracted by grna_tools # grna algorithm: grnaalgoK1 # original (full) file was divided into A,C,G,T subsets # according to the first base in the random barcode # (if first base was N it was not included in any subset) # # sample results file full: SAMPLE_grnatool_full.csv.gz # sample results file randA: SAMPLE_grnatool_randA.csv.gz # sample results file randC: SAMPLE_grnatool_randC.csv.gz # ... # # full: count of lines in results file full # randA: count of lines in results file randA # randC: count of lines in results file randC # ... # fracA: randA/full # fracC: randC/full # ... # cntSum: randA + randC + randG + randT # pctSum: cntSum/full # #sample full randA fracA randC fracC randG fracG randT fracT cntSum pctSum krab_pmid_base_av031 17523298 4587514 26.2% 4226649 24.1% 4546731 25.9% 3911891 22.3% 17272785 98.6% krab_bmdm_base_av032 1576867 348972 22.1% 272797 17.3% 469196 29.8% 476810 30.2% 1567775 99.4% krab_bmdm_high_av033 616048 120774 19.6% 91553 14.9% 192749 31.3% 200535 32.6% 605611 98.3% krab_bmdm_lowx_av034 1608999 330911 20.6% 191799 11.9% 505067 31.4% 569322 35.4% 1597099 99.3% krab_bmdm_lpsx_av035 831330 163704 19.7% 117360 14.1% 260934 31.4% 279736 33.6% 821734 98.8%