Details for gene set HALLMARK_TNFA_SIGNALING_VIA

Table: GSEA Results Summary

Dataset	P53_collapsed_symbols.P53.cls#MUT_versus_WT
Phenotype	P53.cls#MUT_versus_WT
Upregulated in class	WT
GeneSet	HALLMARK_TNFA_SIGNALING_VIA_NFKB
Enrichment Score (ES)	-0.1814952
Normalized Enrichment Score (NES)	-0.7000643
Nominal p-value	0.8666667
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	F3	na	14	0.454	0.0187	Yes
2	RELA	na	195	0.317	0.0146	Yes
3	IL6ST	na	323	0.284	0.0144	Yes
4	BIRC2	na	335	0.281	0.0256	Yes
5	MAFF	na	358	0.274	0.0355	Yes
6	OLR1	na	366	0.272	0.0468	Yes
7	RELB	na	399	0.264	0.0553	Yes
8	IL7R	na	433	0.259	0.0634	Yes
9	MARCKS	na	440	0.258	0.0742	Yes
10	KLF4	na	509	0.247	0.0783	Yes
11	ETS2	na	518	0.247	0.0884	Yes
12	TIPARP	na	535	0.244	0.0975	Yes
13	NFKB2	na	656	0.226	0.0955	Yes
14	BCL6	na	804	0.209	0.0899	Yes
15	IRF1	na	820	0.208	0.0976	Yes
16	CCRL2	na	853	0.204	0.1034	Yes
17	IFNGR2	na	883	0.202	0.1094	Yes
18	IL18	na	1100	0.185	0.0958	Yes
19	CXCL11	na	1294	0.169	0.0839	Yes
20	SOD2	na	1301	0.168	0.0907	Yes
21	IFIT2	na	1308	0.168	0.0975	Yes
22	IL15RA	na	1365	0.164	0.0992	Yes
23	GEM	na	1370	0.164	0.1060	Yes
24	FOS	na	1383	0.163	0.1120	Yes
25	HES1	na	1413	0.161	0.1162	Yes
26	DNAJB4	na	1461	0.158	0.1185	Yes
27	CCL2	na	1561	0.151	0.1152	Yes
28	GADD45A	na	1592	0.149	0.1188	Yes
29	SDC4	na	1619	0.147	0.1226	Yes
30	IER2	na	1655	0.145	0.1255	Yes
31	TNC	na	1695	0.142	0.1279	Yes
32	GADD45B	na	1763	0.137	0.1272	Yes
33	PPP1R15A	na	1825	0.134	0.1270	Yes
34	TRAF1	na	1833	0.133	0.1322	Yes
35	PTGER4	na	1856	0.131	0.1357	Yes
36	FOSL1	na	1876	0.129	0.1395	Yes
37	TANK	na	1941	0.124	0.1386	Yes
38	EHD1	na	1946	0.124	0.1436	Yes
39	BIRC3	na	1955	0.123	0.1482	Yes
40	PHLDA2	na	1973	0.122	0.1519	Yes
41	NFKBIA	na	2002	0.120	0.1544	Yes
42	EFNA1	na	2034	0.118	0.1564	Yes
43	EGR2	na	2057	0.116	0.1594	Yes
44	IL6	na	2075	0.115	0.1628	Yes
45	CSF2	na	2097	0.114	0.1657	Yes
46	SNN	na	2185	0.110	0.1618	Yes
47	PTX3	na	2187	0.110	0.1665	Yes
48	CCL5	na	2213	0.109	0.1688	Yes
49	LAMB3	na	2219	0.108	0.1731	Yes
50	PNRC1	na	2253	0.106	0.1744	Yes
51	B4GALT5	na	2369	0.100	0.1673	No
52	FUT4	na	2389	0.098	0.1697	No
53	TLR2	na	2679	0.083	0.1443	No
54	PANX1	na	2832	0.075	0.1323	No
55	TNFAIP6	na	2842	0.074	0.1347	No
56	NFAT5	na	3028	0.065	0.1189	No
57	CXCL10	na	3211	0.056	0.1031	No
58	CXCL3	na	3288	0.052	0.0978	No
59	TRIP10	na	3357	0.048	0.0930	No
60	CD44	na	3423	0.045	0.0885	No
61	B4GALT1	na	3427	0.044	0.0901	No
62	ZFP36	na	3446	0.043	0.0902	No
63	LDLR	na	3458	0.043	0.0910	No
64	F2RL1	na	3497	0.041	0.0890	No
65	ATP2B1	na	3539	0.039	0.0866	No
66	SERPINE1	na	3565	0.038	0.0858	No
67	CEBPB	na	3580	0.037	0.0860	No
68	CCND1	na	3593	0.037	0.0864	No
69	ICAM1	na	3668	0.034	0.0805	No
70	TNFRSF9	na	3702	0.032	0.0786	No
71	AREG	na	3773	0.029	0.0728	No
72	TNIP1	na	3885	0.023	0.0627	No
73	BTG3	na	3906	0.023	0.0617	No
74	DUSP2	na	4024	0.017	0.0506	No
75	JAG1	na	4027	0.017	0.0512	No
76	IL12B	na	4062	0.015	0.0484	No
77	MAP3K8	na	4114	0.012	0.0438	No
78	NFKB1	na	4483	-0.004	0.0070	No
79	SERPINB8	na	4542	-0.007	0.0015	No
80	MYC	na	4727	-0.015	-0.0164	No
81	JUN	na	4816	-0.019	-0.0244	No
82	GCH1	na	4920	-0.023	-0.0337	No
83	TNFAIP8	na	5043	-0.028	-0.0447	No
84	NFKBIE	na	5081	-0.030	-0.0471	No
85	MAP2K3	na	5101	-0.031	-0.0477	No
86	PLAUR	na	5152	-0.033	-0.0513	No
87	CEBPD	na	5187	-0.035	-0.0532	No
88	FOSL2	na	5366	-0.043	-0.0692	No
89	NR4A2	na	5404	-0.044	-0.0709	No
90	CSF1	na	5473	-0.047	-0.0757	No
91	EGR1	na	5478	-0.048	-0.0740	No
92	BMP2	na	5501	-0.049	-0.0740	No
93	CD69	na	5555	-0.051	-0.0771	No
94	PLAU	na	5583	-0.052	-0.0775	No
95	IER3	na	5592	-0.053	-0.0760	No
96	ID2	na	5868	-0.064	-0.1008	No
97	REL	na	5873	-0.064	-0.0984	No
98	LITAF	na	5961	-0.068	-0.1041	No
99	SERPINB2	na	6040	-0.072	-0.1088	No
100	CD80	na	6099	-0.074	-0.1114	No
101	GFPT2	na	6106	-0.074	-0.1087	No
102	FOSB	na	6124	-0.075	-0.1071	No
103	DUSP5	na	6201	-0.079	-0.1112	No
104	BTG1	na	6312	-0.084	-0.1186	No
105	PTPRE	na	6404	-0.088	-0.1238	No
106	SQSTM1	na	6520	-0.094	-0.1312	No
107	BCL3	na	6654	-0.100	-0.1402	No
108	G0S2	na	6755	-0.105	-0.1456	No
109	DUSP4	na	6816	-0.108	-0.1469	No
110	STAT5A	na	6840	-0.109	-0.1444	No
111	CD83	na	6967	-0.115	-0.1520	No
112	NFIL3	na	6973	-0.115	-0.1474	No
113	MSC	na	7023	-0.118	-0.1472	No
114	LIF	na	7032	-0.118	-0.1427	No
115	PHLDA1	na	7045	-0.119	-0.1387	No
116	TAP1	na	7117	-0.122	-0.1404	No
117	TNFAIP2	na	7183	-0.125	-0.1414	No
118	PDE4B	na	7347	-0.133	-0.1520	No
119	SLC2A3	na	7357	-0.133	-0.1470	No
120	PLEK	na	7425	-0.137	-0.1477	No
121	PFKFB3	na	7433	-0.137	-0.1423	No
122	CFLAR	na	7509	-0.142	-0.1436	No
123	TRIB1	na	7516	-0.142	-0.1379	No
124	ATF3	na	7525	-0.142	-0.1325	No
125	INHBA	na	7533	-0.143	-0.1269	No
126	NFE2L2	na	7539	-0.143	-0.1210	No
127	JUNB	na	7572	-0.145	-0.1178	No
128	SMAD3	na	7616	-0.147	-0.1157	No
129	MCL1	na	7762	-0.155	-0.1234	No
130	RHOB	na	7981	-0.168	-0.1379	No
131	BCL2A1	na	8042	-0.172	-0.1363	No
132	RIPK2	na	8138	-0.177	-0.1381	No
133	PLK2	na	8214	-0.182	-0.1376	No
134	CCL20	na	8488	-0.199	-0.1562	No
135	SLC16A6	na	8641	-0.209	-0.1623	No
136	TNFAIP3	na	8660	-0.211	-0.1548	No
137	IL1B	na	8703	-0.214	-0.1495	No
138	EGR3	na	8733	-0.216	-0.1429	No
139	PTGS2	na	8737	-0.216	-0.1337	No
140	DUSP1	na	9169	-0.246	-0.1662	No
141	IFIH1	na	9176	-0.247	-0.1559	No
142	CXCL2	na	9352	-0.264	-0.1618	No
143	IRS2	na	9549	-0.290	-0.1687	No
144	CXCL1	na	9567	-0.292	-0.1575	No
145	CXCL6	na	9619	-0.301	-0.1493	No
146	NINJ1	na	9649	-0.306	-0.1387	No
147	NR4A3	na	9689	-0.312	-0.1288	No
148	KYNU	na	9704	-0.315	-0.1163	No
149	ABCA1	na	9752	-0.322	-0.1068	No
150	SOCS3	na	9795	-0.330	-0.0965	No
151	TNF	na	9835	-0.340	-0.0854	No
152	NR4A1	na	9844	-0.342	-0.0711	No
153	TNFSF9	na	9930	-0.372	-0.0632	No
154	IL1A	na	9993	-0.400	-0.0518	No
155	BTG2	na	10090	-0.567	-0.0364	No
156	CDKN1A	na	10099	-0.843	-0.0000	No