First stage alignment aligned reads total 1: 86005981
First stage alignment aligned reads total 2: 80409762
First stage alignment aligned multi-reads 1: 5675142
First stage alignment aligned multi-reads 2: 5071848
Second stage alignment aligned reads total 1: 0
Second stage alignment aligned reads total 2: 0
Second stage alignment aligned multi-reads 1: 0
Second stage alignment aligned multi-reads 2: 0