include gorGor_GCA_029281585.2_models_filtered_bed.txt
include bigPsl.txt
include bigChain.txt
include isoseq_bams.txt
include splices.txt
include mp.txt
include lo.txt
include tm.txt
include pb.txt
include minimap.txt

track hubCentral
compositeTrack on
shortLabel Cactus
longLabel Cactus Alignment Tracks
group cat_tracks
subGroup1 view Track_Type Snake=Alignments
subGroup2 orgs Organisms GCA_028885655.2=GCA_028885655.2 GCA_028885625.2=GCA_028885625.2 GCA_029281585.2=GCA_029281585.2 GCA_029289425.2=GCA_029289425.2 GCA_028858775.2=GCA_028858775.2 hg38=hg38 GCA_028878055.2=GCA_028878055.2 hs1=hs1
dragAndDrop subTracks
dimensions dimensionX=view dimensionY=orgs
noInherit on
priority 0
centerLabelsDense on
visibility full
type bigBed 3

    track hubCentralAlignments
    shortLabel Alignments
    view Alignments
    visibility full
    subTrack hubCentral

        track snakeGCA_028885655.2
        longLabel GCA_028885655.2
        shortLabel GCA_028885655.2
        otherSpecies GCA_028885655.2
        visibility hide
        parent hubCentralAlignments off
        priority 3
        bigDataUrl ../8-t2t-apes-2023v2.hal
        type halSnake
        group snake
        subGroups view=Snake orgs=GCA_028885655.2

        track snakeGCA_028885625.2
        longLabel GCA_028885625.2
        shortLabel GCA_028885625.2
        otherSpecies GCA_028885625.2
        visibility hide
        parent hubCentralAlignments off
        priority 3
        bigDataUrl ../8-t2t-apes-2023v2.hal
        type halSnake
        group snake
        subGroups view=Snake orgs=GCA_028885625.2

        track snakeGCA_029281585.2
        longLabel GCA_029281585.2
        shortLabel GCA_029281585.2
        otherSpecies GCA_029281585.2
        visibility hide
        parent hubCentralAlignments off
        priority 3
        bigDataUrl ../8-t2t-apes-2023v2.hal
        type halSnake
        group snake
        subGroups view=Snake orgs=GCA_029281585.2

        track snakeGCA_029289425.2
        longLabel GCA_029289425.2
        shortLabel GCA_029289425.2
        otherSpecies GCA_029289425.2
        visibility hide
        parent hubCentralAlignments off
        priority 3
        bigDataUrl ../8-t2t-apes-2023v2.hal
        type halSnake
        group snake
        subGroups view=Snake orgs=GCA_029289425.2

        track snakeGCA_028858775.2
        longLabel GCA_028858775.2
        shortLabel GCA_028858775.2
        otherSpecies GCA_028858775.2
        visibility hide
        parent hubCentralAlignments off
        priority 3
        bigDataUrl ../8-t2t-apes-2023v2.hal
        type halSnake
        group snake
        subGroups view=Snake orgs=GCA_028858775.2

        track snakehg38
        longLabel hg38
        shortLabel hg38
        otherSpecies hg38
        visibility hide
        parent hubCentralAlignments off
        priority 3
        bigDataUrl ../8-t2t-apes-2023v2.hal
        type halSnake
        group snake
        subGroups view=Snake orgs=hg38

        track snakeGCA_028878055.2
        longLabel GCA_028878055.2
        shortLabel GCA_028878055.2
        otherSpecies GCA_028878055.2
        visibility hide
        parent hubCentralAlignments off
        priority 3
        bigDataUrl ../8-t2t-apes-2023v2.hal
        type halSnake
        group snake
        subGroups view=Snake orgs=GCA_028878055.2

        track snakehs1
        longLabel hs1
        shortLabel hs1
        otherSpecies hs1
        visibility full
        parent hubCentralAlignments off
        priority 3
        bigDataUrl ../8-t2t-apes-2023v2.hal
        type halSnake
        group snake
        subGroups view=Snake orgs=hs1