##gff-version 3
haplotype2-0000357	CAT	gene	17594	18311	.	-	.	ID=Cattle_Y_G00001;Dbxref=GeneID:132344721;Name=LOC132344721;description=proteasome subunit beta type-6-like;gbkey=Gene;gene=LOC132344721;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00001;source_id=gene-LOC132344721
haplotype2-0000357	CAT	exon	17594	18311	.	-	.	ID=Cattle_Y_T00001;Parent=Cattle_Y_G00001;Dbxref=GeneID:132344721;gbkey=exon;gene=LOC132344721;model_evidence=Supporting evidence includes similarity to: 12 Proteins, and 41%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00001;transcript_id=Cattle_Y_T00001;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344721
haplotype2-0000357	CAT	gene	79795	93147	.	-	.	ID=Cattle_Y_G00002;Dbxref=GeneID:132344537;Name=LOC132344537;description=RNA-binding motif protein%2C X chromosome-like;gbkey=Gene;gene=LOC132344537;gene_biotype=protein_coding;gene_id=Cattle_Y_G00002;source_id=gene-LOC132344537
haplotype2-0000357	CAT	mRNA	79795	93147	.	-	.	ID=Cattle_Y_T00002;Parent=Cattle_Y_G00002;Dbxref=GeneID:132344537,GenBank:XM_059884225.1;Name=XM_059884225.1;gbkey=mRNA;gene=LOC132344537;model_evidence=Supporting evidence includes similarity to: 37 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=RNA-binding motif protein%2C X chromosome-like;transcript_id=Cattle_Y_T00002;gene_id=Cattle_Y_G00002;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884225.1
haplotype2-0000357	CAT	exon	79795	82351	.	-	.	ID=Cattle_Y_E00001;Parent=Cattle_Y_T00002;Dbxref=GeneID:132344537,GenBank:XM_059884225.1;gbkey=mRNA;gene=LOC132344537;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00002;gene_id=Cattle_Y_G00002;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884225.1-9
haplotype2-0000357	CAT	exon	82972	83060	.	-	.	ID=Cattle_Y_E00002;Parent=Cattle_Y_T00002;Dbxref=GeneID:132344537,GenBank:XM_059884225.1;gbkey=mRNA;gene=LOC132344537;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00002;gene_id=Cattle_Y_G00002;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884225.1-8
haplotype2-0000357	CAT	exon	83137	83259	.	-	.	ID=Cattle_Y_E00003;Parent=Cattle_Y_T00002;Dbxref=GeneID:132344537,GenBank:XM_059884225.1;gbkey=mRNA;gene=LOC132344537;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00002;gene_id=Cattle_Y_G00002;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884225.1-7
haplotype2-0000357	CAT	exon	84439	84550	.	-	.	ID=Cattle_Y_E00004;Parent=Cattle_Y_T00002;Dbxref=GeneID:132344537,GenBank:XM_059884225.1;gbkey=mRNA;gene=LOC132344537;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00002;gene_id=Cattle_Y_G00002;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884225.1-6
haplotype2-0000357	CAT	exon	85705	85851	.	-	.	ID=Cattle_Y_E00005;Parent=Cattle_Y_T00002;Dbxref=GeneID:132344537,GenBank:XM_059884225.1;gbkey=mRNA;gene=LOC132344537;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00002;gene_id=Cattle_Y_G00002;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884225.1-5
haplotype2-0000357	CAT	exon	87509	87683	.	-	.	ID=Cattle_Y_E00006;Parent=Cattle_Y_T00002;Dbxref=GeneID:132344537,GenBank:XM_059884225.1;gbkey=mRNA;gene=LOC132344537;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00002;gene_id=Cattle_Y_G00002;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884225.1-4
haplotype2-0000357	CAT	exon	89967	90073	.	-	.	ID=Cattle_Y_E00007;Parent=Cattle_Y_T00002;Dbxref=GeneID:132344537,GenBank:XM_059884225.1;gbkey=mRNA;gene=LOC132344537;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00002;gene_id=Cattle_Y_G00002;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884225.1-3
haplotype2-0000357	CAT	exon	90596	90708	.	-	.	ID=Cattle_Y_E00008;Parent=Cattle_Y_T00002;Dbxref=GeneID:132344537,GenBank:XM_059884225.1;gbkey=mRNA;gene=LOC132344537;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00002;gene_id=Cattle_Y_G00002;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884225.1-2
haplotype2-0000357	CAT	exon	93053	93147	.	-	.	ID=Cattle_Y_E00009;Parent=Cattle_Y_T00002;Dbxref=GeneID:132344537,GenBank:XM_059884225.1;gbkey=mRNA;gene=LOC132344537;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00002;gene_id=Cattle_Y_G00002;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884225.1-1
haplotype2-0000357	CAT	CDS	82047	82351	.	-	2	ID=Cattle_Y_C00001;Parent=Cattle_Y_T00002;Dbxref=GeneID:132344537,GenBank:XP_059740208.1;Name=XP_059740208.1;gbkey=CDS;gene=LOC132344537;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740208.1;gene_id=Cattle_Y_G00002;transcript_id=Cattle_Y_T00002;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	82972	83060	.	-	1	ID=Cattle_Y_C00002;Parent=Cattle_Y_T00002;Dbxref=GeneID:132344537,GenBank:XP_059740208.1;Name=XP_059740208.1;gbkey=CDS;gene=LOC132344537;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740208.1;gene_id=Cattle_Y_G00002;transcript_id=Cattle_Y_T00002;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	83137	83259	.	-	1	ID=Cattle_Y_C00003;Parent=Cattle_Y_T00002;Dbxref=GeneID:132344537,GenBank:XP_059740208.1;Name=XP_059740208.1;gbkey=CDS;gene=LOC132344537;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740208.1;gene_id=Cattle_Y_G00002;transcript_id=Cattle_Y_T00002;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	84439	84550	.	-	2	ID=Cattle_Y_C00004;Parent=Cattle_Y_T00002;Dbxref=GeneID:132344537,GenBank:XP_059740208.1;Name=XP_059740208.1;gbkey=CDS;gene=LOC132344537;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740208.1;gene_id=Cattle_Y_G00002;transcript_id=Cattle_Y_T00002;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	85705	85851	.	-	2	ID=Cattle_Y_C00005;Parent=Cattle_Y_T00002;Dbxref=GeneID:132344537,GenBank:XP_059740208.1;Name=XP_059740208.1;gbkey=CDS;gene=LOC132344537;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740208.1;gene_id=Cattle_Y_G00002;transcript_id=Cattle_Y_T00002;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	87509	87683	.	-	0	ID=Cattle_Y_C00006;Parent=Cattle_Y_T00002;Dbxref=GeneID:132344537,GenBank:XP_059740208.1;Name=XP_059740208.1;gbkey=CDS;gene=LOC132344537;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740208.1;gene_id=Cattle_Y_G00002;transcript_id=Cattle_Y_T00002;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	89967	90073	.	-	2	ID=Cattle_Y_C00007;Parent=Cattle_Y_T00002;Dbxref=GeneID:132344537,GenBank:XP_059740208.1;Name=XP_059740208.1;gbkey=CDS;gene=LOC132344537;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740208.1;gene_id=Cattle_Y_G00002;transcript_id=Cattle_Y_T00002;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	90596	90704	.	-	0	ID=Cattle_Y_C00008;Parent=Cattle_Y_T00002;Dbxref=GeneID:132344537,GenBank:XP_059740208.1;Name=XP_059740208.1;gbkey=CDS;gene=LOC132344537;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740208.1;gene_id=Cattle_Y_G00002;transcript_id=Cattle_Y_T00002;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	95557	96509	.	+	.	ID=Cattle_Y_G00003;Dbxref=GeneID:132344566;Name=LOC132344566;description=etoposide-induced protein 2.4 homolog;gbkey=Gene;gene=LOC132344566;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00003;source_id=gene-LOC132344566
haplotype2-0000357	CAT	exon	95557	96509	.	+	.	ID=Cattle_Y_T00003;Parent=Cattle_Y_G00003;Dbxref=GeneID:132344566;gbkey=exon;gene=LOC132344566;model_evidence=Supporting evidence includes similarity to: 12 Proteins, and 11%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00003;transcript_id=Cattle_Y_T00003;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344566
haplotype2-0000357	CAT	gene	103732	114679	.	-	.	ID=Cattle_Y_G00004;Dbxref=GeneID:132344534;Name=LOC132344534;description=RNA-binding motif protein%2C X chromosome-like;gbkey=Gene;gene=LOC132344534;gene_biotype=protein_coding;gene_id=Cattle_Y_G00004;source_id=gene-LOC132344534
haplotype2-0000357	CAT	mRNA	103732	114679	.	-	.	ID=Cattle_Y_T00004;Parent=Cattle_Y_G00004;Dbxref=GeneID:132344534,GenBank:XM_059884222.1;Name=XM_059884222.1;gbkey=mRNA;gene=LOC132344534;model_evidence=Supporting evidence includes similarity to: 37 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=RNA-binding motif protein%2C X chromosome-like;transcript_id=Cattle_Y_T00004;gene_id=Cattle_Y_G00004;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884222.1
haplotype2-0000357	CAT	exon	103732	106288	.	-	.	ID=Cattle_Y_E00010;Parent=Cattle_Y_T00004;Dbxref=GeneID:132344534,GenBank:XM_059884222.1;gbkey=mRNA;gene=LOC132344534;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00004;gene_id=Cattle_Y_G00004;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884222.1-8
haplotype2-0000357	CAT	exon	106909	106997	.	-	.	ID=Cattle_Y_E00011;Parent=Cattle_Y_T00004;Dbxref=GeneID:132344534,GenBank:XM_059884222.1;gbkey=mRNA;gene=LOC132344534;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00004;gene_id=Cattle_Y_G00004;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884222.1-7
haplotype2-0000357	CAT	exon	107074	107196	.	-	.	ID=Cattle_Y_E00012;Parent=Cattle_Y_T00004;Dbxref=GeneID:132344534,GenBank:XM_059884222.1;gbkey=mRNA;gene=LOC132344534;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00004;gene_id=Cattle_Y_G00004;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884222.1-6
haplotype2-0000357	CAT	exon	108376	108487	.	-	.	ID=Cattle_Y_E00013;Parent=Cattle_Y_T00004;Dbxref=GeneID:132344534,GenBank:XM_059884222.1;gbkey=mRNA;gene=LOC132344534;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00004;gene_id=Cattle_Y_G00004;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884222.1-5
haplotype2-0000357	CAT	exon	109650	109796	.	-	.	ID=Cattle_Y_E00014;Parent=Cattle_Y_T00004;Dbxref=GeneID:132344534,GenBank:XM_059884222.1;gbkey=mRNA;gene=LOC132344534;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00004;gene_id=Cattle_Y_G00004;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884222.1-4
haplotype2-0000357	CAT	exon	111454	111628	.	-	.	ID=Cattle_Y_E00015;Parent=Cattle_Y_T00004;Dbxref=GeneID:132344534,GenBank:XM_059884222.1;gbkey=mRNA;gene=LOC132344534;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00004;gene_id=Cattle_Y_G00004;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884222.1-3
haplotype2-0000357	CAT	exon	113911	114017	.	-	.	ID=Cattle_Y_E00016;Parent=Cattle_Y_T00004;Dbxref=GeneID:132344534,GenBank:XM_059884222.1;gbkey=mRNA;gene=LOC132344534;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00004;gene_id=Cattle_Y_G00004;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884222.1-2
haplotype2-0000357	CAT	exon	114540	114679	.	-	.	ID=Cattle_Y_E00017;Parent=Cattle_Y_T00004;Dbxref=GeneID:132344534,GenBank:XM_059884222.1;gbkey=mRNA;gene=LOC132344534;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00004;gene_id=Cattle_Y_G00004;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884222.1-1
haplotype2-0000357	CAT	CDS	105984	106288	.	-	2	ID=Cattle_Y_C00009;Parent=Cattle_Y_T00004;Dbxref=GeneID:132344534,GenBank:XP_059740205.1;Name=XP_059740205.1;gbkey=CDS;gene=LOC132344534;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740205.1;gene_id=Cattle_Y_G00004;transcript_id=Cattle_Y_T00004;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	106909	106997	.	-	1	ID=Cattle_Y_C00010;Parent=Cattle_Y_T00004;Dbxref=GeneID:132344534,GenBank:XP_059740205.1;Name=XP_059740205.1;gbkey=CDS;gene=LOC132344534;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740205.1;gene_id=Cattle_Y_G00004;transcript_id=Cattle_Y_T00004;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	107074	107196	.	-	1	ID=Cattle_Y_C00011;Parent=Cattle_Y_T00004;Dbxref=GeneID:132344534,GenBank:XP_059740205.1;Name=XP_059740205.1;gbkey=CDS;gene=LOC132344534;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740205.1;gene_id=Cattle_Y_G00004;transcript_id=Cattle_Y_T00004;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	108376	108487	.	-	2	ID=Cattle_Y_C00012;Parent=Cattle_Y_T00004;Dbxref=GeneID:132344534,GenBank:XP_059740205.1;Name=XP_059740205.1;gbkey=CDS;gene=LOC132344534;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740205.1;gene_id=Cattle_Y_G00004;transcript_id=Cattle_Y_T00004;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	109650	109796	.	-	2	ID=Cattle_Y_C00013;Parent=Cattle_Y_T00004;Dbxref=GeneID:132344534,GenBank:XP_059740205.1;Name=XP_059740205.1;gbkey=CDS;gene=LOC132344534;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740205.1;gene_id=Cattle_Y_G00004;transcript_id=Cattle_Y_T00004;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	111454	111628	.	-	0	ID=Cattle_Y_C00014;Parent=Cattle_Y_T00004;Dbxref=GeneID:132344534,GenBank:XP_059740205.1;Name=XP_059740205.1;gbkey=CDS;gene=LOC132344534;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740205.1;gene_id=Cattle_Y_G00004;transcript_id=Cattle_Y_T00004;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	113911	114017	.	-	2	ID=Cattle_Y_C00015;Parent=Cattle_Y_T00004;Dbxref=GeneID:132344534,GenBank:XP_059740205.1;Name=XP_059740205.1;gbkey=CDS;gene=LOC132344534;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740205.1;gene_id=Cattle_Y_G00004;transcript_id=Cattle_Y_T00004;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	114540	114648	.	-	0	ID=Cattle_Y_C00016;Parent=Cattle_Y_T00004;Dbxref=GeneID:132344534,GenBank:XP_059740205.1;Name=XP_059740205.1;gbkey=CDS;gene=LOC132344534;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740205.1;gene_id=Cattle_Y_G00004;transcript_id=Cattle_Y_T00004;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	119503	120455	.	+	.	ID=Cattle_Y_G00005;Dbxref=GeneID:132344567;Name=LOC132344567;description=etoposide-induced protein 2.4 homolog;gbkey=Gene;gene=LOC132344567;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00005;source_id=gene-LOC132344567
haplotype2-0000357	CAT	exon	119503	120455	.	+	.	ID=Cattle_Y_T00005;Parent=Cattle_Y_G00005;Dbxref=GeneID:132344567;gbkey=exon;gene=LOC132344567;model_evidence=Supporting evidence includes similarity to: 12 Proteins, and 11%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00005;transcript_id=Cattle_Y_T00005;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344567
haplotype2-0000357	CAT	gene	127668	141024	.	-	.	ID=Cattle_Y_G00006;Dbxref=GeneID:132344531;Name=LOC132344531;description=RNA-binding motif protein%2C X chromosome-like;gbkey=Gene;gene=LOC132344531;gene_biotype=protein_coding;gene_id=Cattle_Y_G00006;source_id=gene-LOC132344531
haplotype2-0000357	CAT	mRNA	127668	141024	.	-	.	ID=Cattle_Y_T00006;Parent=Cattle_Y_G00006;Dbxref=GeneID:132344531,GenBank:XM_059884219.1;Name=XM_059884219.1;gbkey=mRNA;gene=LOC132344531;model_evidence=Supporting evidence includes similarity to: 37 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=RNA-binding motif protein%2C X chromosome-like;transcript_id=Cattle_Y_T00006;gene_id=Cattle_Y_G00006;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884219.1
haplotype2-0000357	CAT	exon	127668	130224	.	-	.	ID=Cattle_Y_E00018;Parent=Cattle_Y_T00006;Dbxref=GeneID:132344531,GenBank:XM_059884219.1;gbkey=mRNA;gene=LOC132344531;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00006;gene_id=Cattle_Y_G00006;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884219.1-9
haplotype2-0000357	CAT	exon	130845	130933	.	-	.	ID=Cattle_Y_E00019;Parent=Cattle_Y_T00006;Dbxref=GeneID:132344531,GenBank:XM_059884219.1;gbkey=mRNA;gene=LOC132344531;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00006;gene_id=Cattle_Y_G00006;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884219.1-8
haplotype2-0000357	CAT	exon	131010	131132	.	-	.	ID=Cattle_Y_E00020;Parent=Cattle_Y_T00006;Dbxref=GeneID:132344531,GenBank:XM_059884219.1;gbkey=mRNA;gene=LOC132344531;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00006;gene_id=Cattle_Y_G00006;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884219.1-7
haplotype2-0000357	CAT	exon	132312	132423	.	-	.	ID=Cattle_Y_E00021;Parent=Cattle_Y_T00006;Dbxref=GeneID:132344531,GenBank:XM_059884219.1;gbkey=mRNA;gene=LOC132344531;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00006;gene_id=Cattle_Y_G00006;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884219.1-6
haplotype2-0000357	CAT	exon	133583	133729	.	-	.	ID=Cattle_Y_E00022;Parent=Cattle_Y_T00006;Dbxref=GeneID:132344531,GenBank:XM_059884219.1;gbkey=mRNA;gene=LOC132344531;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00006;gene_id=Cattle_Y_G00006;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884219.1-5
haplotype2-0000357	CAT	exon	135388	135562	.	-	.	ID=Cattle_Y_E00023;Parent=Cattle_Y_T00006;Dbxref=GeneID:132344531,GenBank:XM_059884219.1;gbkey=mRNA;gene=LOC132344531;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00006;gene_id=Cattle_Y_G00006;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884219.1-4
haplotype2-0000357	CAT	exon	137845	137951	.	-	.	ID=Cattle_Y_E00024;Parent=Cattle_Y_T00006;Dbxref=GeneID:132344531,GenBank:XM_059884219.1;gbkey=mRNA;gene=LOC132344531;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00006;gene_id=Cattle_Y_G00006;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884219.1-3
haplotype2-0000357	CAT	exon	138474	138586	.	-	.	ID=Cattle_Y_E00025;Parent=Cattle_Y_T00006;Dbxref=GeneID:132344531,GenBank:XM_059884219.1;gbkey=mRNA;gene=LOC132344531;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00006;gene_id=Cattle_Y_G00006;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884219.1-2
haplotype2-0000357	CAT	exon	140930	141024	.	-	.	ID=Cattle_Y_E00026;Parent=Cattle_Y_T00006;Dbxref=GeneID:132344531,GenBank:XM_059884219.1;gbkey=mRNA;gene=LOC132344531;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00006;gene_id=Cattle_Y_G00006;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884219.1-1
haplotype2-0000357	CAT	CDS	129920	130224	.	-	2	ID=Cattle_Y_C00017;Parent=Cattle_Y_T00006;Dbxref=GeneID:132344531,GenBank:XP_059740202.1;Name=XP_059740202.1;gbkey=CDS;gene=LOC132344531;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740202.1;gene_id=Cattle_Y_G00006;transcript_id=Cattle_Y_T00006;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	130845	130933	.	-	1	ID=Cattle_Y_C00018;Parent=Cattle_Y_T00006;Dbxref=GeneID:132344531,GenBank:XP_059740202.1;Name=XP_059740202.1;gbkey=CDS;gene=LOC132344531;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740202.1;gene_id=Cattle_Y_G00006;transcript_id=Cattle_Y_T00006;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	131010	131132	.	-	1	ID=Cattle_Y_C00019;Parent=Cattle_Y_T00006;Dbxref=GeneID:132344531,GenBank:XP_059740202.1;Name=XP_059740202.1;gbkey=CDS;gene=LOC132344531;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740202.1;gene_id=Cattle_Y_G00006;transcript_id=Cattle_Y_T00006;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	132312	132423	.	-	2	ID=Cattle_Y_C00020;Parent=Cattle_Y_T00006;Dbxref=GeneID:132344531,GenBank:XP_059740202.1;Name=XP_059740202.1;gbkey=CDS;gene=LOC132344531;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740202.1;gene_id=Cattle_Y_G00006;transcript_id=Cattle_Y_T00006;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	133583	133729	.	-	2	ID=Cattle_Y_C00021;Parent=Cattle_Y_T00006;Dbxref=GeneID:132344531,GenBank:XP_059740202.1;Name=XP_059740202.1;gbkey=CDS;gene=LOC132344531;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740202.1;gene_id=Cattle_Y_G00006;transcript_id=Cattle_Y_T00006;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	135388	135562	.	-	0	ID=Cattle_Y_C00022;Parent=Cattle_Y_T00006;Dbxref=GeneID:132344531,GenBank:XP_059740202.1;Name=XP_059740202.1;gbkey=CDS;gene=LOC132344531;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740202.1;gene_id=Cattle_Y_G00006;transcript_id=Cattle_Y_T00006;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	137845	137951	.	-	2	ID=Cattle_Y_C00023;Parent=Cattle_Y_T00006;Dbxref=GeneID:132344531,GenBank:XP_059740202.1;Name=XP_059740202.1;gbkey=CDS;gene=LOC132344531;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740202.1;gene_id=Cattle_Y_G00006;transcript_id=Cattle_Y_T00006;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	138474	138582	.	-	0	ID=Cattle_Y_C00024;Parent=Cattle_Y_T00006;Dbxref=GeneID:132344531,GenBank:XP_059740202.1;Name=XP_059740202.1;gbkey=CDS;gene=LOC132344531;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740202.1;gene_id=Cattle_Y_G00006;transcript_id=Cattle_Y_T00006;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	143436	144388	.	+	.	ID=Cattle_Y_G00007;Dbxref=GeneID:132344568;Name=LOC132344568;description=etoposide-induced protein 2.4 homolog;gbkey=Gene;gene=LOC132344568;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00007;source_id=gene-LOC132344568
haplotype2-0000357	CAT	exon	143436	144388	.	+	.	ID=Cattle_Y_T00007;Parent=Cattle_Y_G00007;Dbxref=GeneID:132344568;gbkey=exon;gene=LOC132344568;model_evidence=Supporting evidence includes similarity to: 12 Proteins, and 11%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00007;transcript_id=Cattle_Y_T00007;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344568
haplotype2-0000357	CAT	gene	151604	164964	.	-	.	ID=Cattle_Y_G00008;Dbxref=GeneID:100337685;Name=RBMY;description=RNA binding motif protein%2C Y-linked;gbkey=Gene;gene=RBMY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00008;source_id=gene-RBMY
haplotype2-0000357	CAT	mRNA	153581	162525	.	-	.	ID=Cattle_Y_T00008;Parent=Cattle_Y_G00008;Dbxref=GeneID:100337685,GenBank:NM_001281900.2;Name=NM_001281900.2;gbkey=mRNA;gene=RBMY;product=RNA binding motif protein%2C Y-linked;transcript_id=Cattle_Y_T00008;gene_id=Cattle_Y_G00008;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001281900.2
haplotype2-0000357	CAT	exon	153581	154160	.	-	.	ID=Cattle_Y_E00027;Parent=Cattle_Y_T00008;Dbxref=GeneID:100337685,GenBank:NM_001281900.2;gbkey=mRNA;gene=RBMY;product=RNA binding motif protein, Y-linked;transcript_id=Cattle_Y_T00008;gene_id=Cattle_Y_G00008;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001281900.2-8
haplotype2-0000357	CAT	exon	154781	154869	.	-	.	ID=Cattle_Y_E00028;Parent=Cattle_Y_T00008;Dbxref=GeneID:100337685,GenBank:NM_001281900.2;gbkey=mRNA;gene=RBMY;product=RNA binding motif protein, Y-linked;transcript_id=Cattle_Y_T00008;gene_id=Cattle_Y_G00008;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001281900.2-7
haplotype2-0000357	CAT	exon	154946	155068	.	-	.	ID=Cattle_Y_E00029;Parent=Cattle_Y_T00008;Dbxref=GeneID:100337685,GenBank:NM_001281900.2;gbkey=mRNA;gene=RBMY;product=RNA binding motif protein, Y-linked;transcript_id=Cattle_Y_T00008;gene_id=Cattle_Y_G00008;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001281900.2-6
haplotype2-0000357	CAT	exon	156248	156359	.	-	.	ID=Cattle_Y_E00030;Parent=Cattle_Y_T00008;Dbxref=GeneID:100337685,GenBank:NM_001281900.2;gbkey=mRNA;gene=RBMY;product=RNA binding motif protein, Y-linked;transcript_id=Cattle_Y_T00008;gene_id=Cattle_Y_G00008;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001281900.2-5
haplotype2-0000357	CAT	exon	157523	157669	.	-	.	ID=Cattle_Y_E00031;Parent=Cattle_Y_T00008;Dbxref=GeneID:100337685,GenBank:NM_001281900.2;gbkey=mRNA;gene=RBMY;product=RNA binding motif protein, Y-linked;transcript_id=Cattle_Y_T00008;gene_id=Cattle_Y_G00008;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001281900.2-4
haplotype2-0000357	CAT	exon	159327	159501	.	-	.	ID=Cattle_Y_E00032;Parent=Cattle_Y_T00008;Dbxref=GeneID:100337685,GenBank:NM_001281900.2;gbkey=mRNA;gene=RBMY;product=RNA binding motif protein, Y-linked;transcript_id=Cattle_Y_T00008;gene_id=Cattle_Y_G00008;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001281900.2-3
haplotype2-0000357	CAT	exon	161784	161890	.	-	.	ID=Cattle_Y_E00033;Parent=Cattle_Y_T00008;Dbxref=GeneID:100337685,GenBank:NM_001281900.2;gbkey=mRNA;gene=RBMY;product=RNA binding motif protein, Y-linked;transcript_id=Cattle_Y_T00008;gene_id=Cattle_Y_G00008;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001281900.2-2
haplotype2-0000357	CAT	exon	162413	162525	.	-	.	ID=Cattle_Y_E00034;Parent=Cattle_Y_T00008;Dbxref=GeneID:100337685,GenBank:NM_001281900.2;gbkey=mRNA;gene=RBMY;product=RNA binding motif protein, Y-linked;transcript_id=Cattle_Y_T00008;gene_id=Cattle_Y_G00008;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001281900.2-1
haplotype2-0000357	CAT	CDS	153856	154160	.	-	2	ID=Cattle_Y_C00025;Parent=Cattle_Y_T00008;Dbxref=GeneID:100337685,GenBank:NP_001268829.2;Name=NP_001268829.2;gbkey=CDS;gene=RBMY;product=RNA binding motif protein, Y-linked;protein_id=NP_001268829.2;gene_id=Cattle_Y_G00008;transcript_id=Cattle_Y_T00008;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	154781	154869	.	-	1	ID=Cattle_Y_C00026;Parent=Cattle_Y_T00008;Dbxref=GeneID:100337685,GenBank:NP_001268829.2;Name=NP_001268829.2;gbkey=CDS;gene=RBMY;product=RNA binding motif protein, Y-linked;protein_id=NP_001268829.2;gene_id=Cattle_Y_G00008;transcript_id=Cattle_Y_T00008;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	154946	155068	.	-	1	ID=Cattle_Y_C00027;Parent=Cattle_Y_T00008;Dbxref=GeneID:100337685,GenBank:NP_001268829.2;Name=NP_001268829.2;gbkey=CDS;gene=RBMY;product=RNA binding motif protein, Y-linked;protein_id=NP_001268829.2;gene_id=Cattle_Y_G00008;transcript_id=Cattle_Y_T00008;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	156248	156359	.	-	2	ID=Cattle_Y_C00028;Parent=Cattle_Y_T00008;Dbxref=GeneID:100337685,GenBank:NP_001268829.2;Name=NP_001268829.2;gbkey=CDS;gene=RBMY;product=RNA binding motif protein, Y-linked;protein_id=NP_001268829.2;gene_id=Cattle_Y_G00008;transcript_id=Cattle_Y_T00008;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	157523	157669	.	-	2	ID=Cattle_Y_C00029;Parent=Cattle_Y_T00008;Dbxref=GeneID:100337685,GenBank:NP_001268829.2;Name=NP_001268829.2;gbkey=CDS;gene=RBMY;product=RNA binding motif protein, Y-linked;protein_id=NP_001268829.2;gene_id=Cattle_Y_G00008;transcript_id=Cattle_Y_T00008;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	159327	159501	.	-	0	ID=Cattle_Y_C00030;Parent=Cattle_Y_T00008;Dbxref=GeneID:100337685,GenBank:NP_001268829.2;Name=NP_001268829.2;gbkey=CDS;gene=RBMY;product=RNA binding motif protein, Y-linked;protein_id=NP_001268829.2;gene_id=Cattle_Y_G00008;transcript_id=Cattle_Y_T00008;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	161784	161890	.	-	2	ID=Cattle_Y_C00031;Parent=Cattle_Y_T00008;Dbxref=GeneID:100337685,GenBank:NP_001268829.2;Name=NP_001268829.2;gbkey=CDS;gene=RBMY;product=RNA binding motif protein, Y-linked;protein_id=NP_001268829.2;gene_id=Cattle_Y_G00008;transcript_id=Cattle_Y_T00008;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	162413	162521	.	-	0	ID=Cattle_Y_C00032;Parent=Cattle_Y_T00008;Dbxref=GeneID:100337685,GenBank:NP_001268829.2;Name=NP_001268829.2;gbkey=CDS;gene=RBMY;product=RNA binding motif protein, Y-linked;protein_id=NP_001268829.2;gene_id=Cattle_Y_G00008;transcript_id=Cattle_Y_T00008;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	151604	164964	.	-	.	ID=Cattle_Y_T00009;Parent=Cattle_Y_G00008;Dbxref=GeneID:100337685,GenBank:XM_059883968.1;Name=XM_059883968.1;gbkey=mRNA;gene=RBMY;model_evidence=Supporting evidence includes similarity to: 2 mRNAs%2C 39 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=RNA binding motif protein%2C Y-linked%2C transcript variant X1;transcript_id=Cattle_Y_T00009;gene_id=Cattle_Y_G00008;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883968.1
haplotype2-0000357	CAT	exon	151604	154160	.	-	.	ID=Cattle_Y_E00035;Parent=Cattle_Y_T00009;Dbxref=GeneID:100337685,GenBank:XM_059883968.1;gbkey=mRNA;gene=RBMY;product=RNA binding motif protein, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T00009;gene_id=Cattle_Y_G00008;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883968.1-9
haplotype2-0000357	CAT	exon	154781	154869	.	-	.	ID=Cattle_Y_E00036;Parent=Cattle_Y_T00009;Dbxref=GeneID:100337685,GenBank:XM_059883968.1;gbkey=mRNA;gene=RBMY;product=RNA binding motif protein, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T00009;gene_id=Cattle_Y_G00008;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883968.1-8
haplotype2-0000357	CAT	exon	154946	155068	.	-	.	ID=Cattle_Y_E00037;Parent=Cattle_Y_T00009;Dbxref=GeneID:100337685,GenBank:XM_059883968.1;gbkey=mRNA;gene=RBMY;product=RNA binding motif protein, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T00009;gene_id=Cattle_Y_G00008;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883968.1-7
haplotype2-0000357	CAT	exon	156248	156359	.	-	.	ID=Cattle_Y_E00038;Parent=Cattle_Y_T00009;Dbxref=GeneID:100337685,GenBank:XM_059883968.1;gbkey=mRNA;gene=RBMY;product=RNA binding motif protein, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T00009;gene_id=Cattle_Y_G00008;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883968.1-6
haplotype2-0000357	CAT	exon	157523	157669	.	-	.	ID=Cattle_Y_E00039;Parent=Cattle_Y_T00009;Dbxref=GeneID:100337685,GenBank:XM_059883968.1;gbkey=mRNA;gene=RBMY;product=RNA binding motif protein, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T00009;gene_id=Cattle_Y_G00008;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883968.1-5
haplotype2-0000357	CAT	exon	159327	159501	.	-	.	ID=Cattle_Y_E00040;Parent=Cattle_Y_T00009;Dbxref=GeneID:100337685,GenBank:XM_059883968.1;gbkey=mRNA;gene=RBMY;product=RNA binding motif protein, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T00009;gene_id=Cattle_Y_G00008;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883968.1-4
haplotype2-0000357	CAT	exon	161784	161890	.	-	.	ID=Cattle_Y_E00041;Parent=Cattle_Y_T00009;Dbxref=GeneID:100337685,GenBank:XM_059883968.1;gbkey=mRNA;gene=RBMY;product=RNA binding motif protein, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T00009;gene_id=Cattle_Y_G00008;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883968.1-3
haplotype2-0000357	CAT	exon	162413	162525	.	-	.	ID=Cattle_Y_E00042;Parent=Cattle_Y_T00009;Dbxref=GeneID:100337685,GenBank:XM_059883968.1;gbkey=mRNA;gene=RBMY;product=RNA binding motif protein, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T00009;gene_id=Cattle_Y_G00008;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883968.1-2
haplotype2-0000357	CAT	exon	164870	164964	.	-	.	ID=Cattle_Y_E00043;Parent=Cattle_Y_T00009;Dbxref=GeneID:100337685,GenBank:XM_059883968.1;gbkey=mRNA;gene=RBMY;product=RNA binding motif protein, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T00009;gene_id=Cattle_Y_G00008;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883968.1-1
haplotype2-0000357	CAT	CDS	153856	154160	.	-	2	ID=Cattle_Y_C00033;Parent=Cattle_Y_T00009;Dbxref=GeneID:100337685,GenBank:XP_059739951.1;Name=XP_059739951.1;gbkey=CDS;gene=RBMY;product=RNA binding motif protein, Y-linked isoform X1;protein_id=XP_059739951.1;gene_id=Cattle_Y_G00008;transcript_id=Cattle_Y_T00009;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	154781	154869	.	-	1	ID=Cattle_Y_C00034;Parent=Cattle_Y_T00009;Dbxref=GeneID:100337685,GenBank:XP_059739951.1;Name=XP_059739951.1;gbkey=CDS;gene=RBMY;product=RNA binding motif protein, Y-linked isoform X1;protein_id=XP_059739951.1;gene_id=Cattle_Y_G00008;transcript_id=Cattle_Y_T00009;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	154946	155068	.	-	1	ID=Cattle_Y_C00035;Parent=Cattle_Y_T00009;Dbxref=GeneID:100337685,GenBank:XP_059739951.1;Name=XP_059739951.1;gbkey=CDS;gene=RBMY;product=RNA binding motif protein, Y-linked isoform X1;protein_id=XP_059739951.1;gene_id=Cattle_Y_G00008;transcript_id=Cattle_Y_T00009;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	156248	156359	.	-	2	ID=Cattle_Y_C00036;Parent=Cattle_Y_T00009;Dbxref=GeneID:100337685,GenBank:XP_059739951.1;Name=XP_059739951.1;gbkey=CDS;gene=RBMY;product=RNA binding motif protein, Y-linked isoform X1;protein_id=XP_059739951.1;gene_id=Cattle_Y_G00008;transcript_id=Cattle_Y_T00009;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	157523	157669	.	-	2	ID=Cattle_Y_C00037;Parent=Cattle_Y_T00009;Dbxref=GeneID:100337685,GenBank:XP_059739951.1;Name=XP_059739951.1;gbkey=CDS;gene=RBMY;product=RNA binding motif protein, Y-linked isoform X1;protein_id=XP_059739951.1;gene_id=Cattle_Y_G00008;transcript_id=Cattle_Y_T00009;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	159327	159501	.	-	0	ID=Cattle_Y_C00038;Parent=Cattle_Y_T00009;Dbxref=GeneID:100337685,GenBank:XP_059739951.1;Name=XP_059739951.1;gbkey=CDS;gene=RBMY;product=RNA binding motif protein, Y-linked isoform X1;protein_id=XP_059739951.1;gene_id=Cattle_Y_G00008;transcript_id=Cattle_Y_T00009;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	161784	161890	.	-	2	ID=Cattle_Y_C00039;Parent=Cattle_Y_T00009;Dbxref=GeneID:100337685,GenBank:XP_059739951.1;Name=XP_059739951.1;gbkey=CDS;gene=RBMY;product=RNA binding motif protein, Y-linked isoform X1;protein_id=XP_059739951.1;gene_id=Cattle_Y_G00008;transcript_id=Cattle_Y_T00009;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	162413	162521	.	-	0	ID=Cattle_Y_C00040;Parent=Cattle_Y_T00009;Dbxref=GeneID:100337685,GenBank:XP_059739951.1;Name=XP_059739951.1;gbkey=CDS;gene=RBMY;product=RNA binding motif protein, Y-linked isoform X1;protein_id=XP_059739951.1;gene_id=Cattle_Y_G00008;transcript_id=Cattle_Y_T00009;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	167376	168328	.	+	.	ID=Cattle_Y_G00009;Dbxref=GeneID:132344564;Name=LOC132344564;description=etoposide-induced protein 2.4 homolog;gbkey=Gene;gene=LOC132344564;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00009;source_id=gene-LOC132344564
haplotype2-0000357	CAT	exon	167376	168328	.	+	.	ID=Cattle_Y_T00010;Parent=Cattle_Y_G00009;Dbxref=GeneID:132344564;gbkey=exon;gene=LOC132344564;model_evidence=Supporting evidence includes similarity to: 12 Proteins, and 11%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00009;transcript_id=Cattle_Y_T00010;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344564
haplotype2-0000357	CAT	gene	175543	186488	.	-	.	ID=Cattle_Y_G00010;Dbxref=GeneID:132344533;Name=LOC132344533;description=RNA-binding motif protein%2C X chromosome-like;gbkey=Gene;gene=LOC132344533;gene_biotype=protein_coding;gene_id=Cattle_Y_G00010;source_id=gene-LOC132344533
haplotype2-0000357	CAT	mRNA	175543	186488	.	-	.	ID=Cattle_Y_T00011;Parent=Cattle_Y_G00010;Dbxref=GeneID:132344533,GenBank:XM_059884221.1;Name=XM_059884221.1;gbkey=mRNA;gene=LOC132344533;model_evidence=Supporting evidence includes similarity to: 37 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=RNA-binding motif protein%2C X chromosome-like;transcript_id=Cattle_Y_T00011;gene_id=Cattle_Y_G00010;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884221.1
haplotype2-0000357	CAT	exon	175543	178099	.	-	.	ID=Cattle_Y_E00044;Parent=Cattle_Y_T00011;Dbxref=GeneID:132344533,GenBank:XM_059884221.1;gbkey=mRNA;gene=LOC132344533;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00011;gene_id=Cattle_Y_G00010;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884221.1-8
haplotype2-0000357	CAT	exon	178720	178808	.	-	.	ID=Cattle_Y_E00045;Parent=Cattle_Y_T00011;Dbxref=GeneID:132344533,GenBank:XM_059884221.1;gbkey=mRNA;gene=LOC132344533;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00011;gene_id=Cattle_Y_G00010;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884221.1-7
haplotype2-0000357	CAT	exon	178885	179007	.	-	.	ID=Cattle_Y_E00046;Parent=Cattle_Y_T00011;Dbxref=GeneID:132344533,GenBank:XM_059884221.1;gbkey=mRNA;gene=LOC132344533;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00011;gene_id=Cattle_Y_G00010;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884221.1-6
haplotype2-0000357	CAT	exon	180187	180298	.	-	.	ID=Cattle_Y_E00047;Parent=Cattle_Y_T00011;Dbxref=GeneID:132344533,GenBank:XM_059884221.1;gbkey=mRNA;gene=LOC132344533;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00011;gene_id=Cattle_Y_G00010;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884221.1-5
haplotype2-0000357	CAT	exon	181459	181605	.	-	.	ID=Cattle_Y_E00048;Parent=Cattle_Y_T00011;Dbxref=GeneID:132344533,GenBank:XM_059884221.1;gbkey=mRNA;gene=LOC132344533;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00011;gene_id=Cattle_Y_G00010;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884221.1-4
haplotype2-0000357	CAT	exon	183263	183437	.	-	.	ID=Cattle_Y_E00049;Parent=Cattle_Y_T00011;Dbxref=GeneID:132344533,GenBank:XM_059884221.1;gbkey=mRNA;gene=LOC132344533;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00011;gene_id=Cattle_Y_G00010;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884221.1-3
haplotype2-0000357	CAT	exon	185720	185826	.	-	.	ID=Cattle_Y_E00050;Parent=Cattle_Y_T00011;Dbxref=GeneID:132344533,GenBank:XM_059884221.1;gbkey=mRNA;gene=LOC132344533;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00011;gene_id=Cattle_Y_G00010;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884221.1-2
haplotype2-0000357	CAT	exon	186349	186488	.	-	.	ID=Cattle_Y_E00051;Parent=Cattle_Y_T00011;Dbxref=GeneID:132344533,GenBank:XM_059884221.1;gbkey=mRNA;gene=LOC132344533;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00011;gene_id=Cattle_Y_G00010;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884221.1-1
haplotype2-0000357	CAT	CDS	177795	178099	.	-	2	ID=Cattle_Y_C00041;Parent=Cattle_Y_T00011;Dbxref=GeneID:132344533,GenBank:XP_059740204.1;Name=XP_059740204.1;gbkey=CDS;gene=LOC132344533;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740204.1;gene_id=Cattle_Y_G00010;transcript_id=Cattle_Y_T00011;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	178720	178808	.	-	1	ID=Cattle_Y_C00042;Parent=Cattle_Y_T00011;Dbxref=GeneID:132344533,GenBank:XP_059740204.1;Name=XP_059740204.1;gbkey=CDS;gene=LOC132344533;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740204.1;gene_id=Cattle_Y_G00010;transcript_id=Cattle_Y_T00011;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	178885	179007	.	-	1	ID=Cattle_Y_C00043;Parent=Cattle_Y_T00011;Dbxref=GeneID:132344533,GenBank:XP_059740204.1;Name=XP_059740204.1;gbkey=CDS;gene=LOC132344533;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740204.1;gene_id=Cattle_Y_G00010;transcript_id=Cattle_Y_T00011;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	180187	180298	.	-	2	ID=Cattle_Y_C00044;Parent=Cattle_Y_T00011;Dbxref=GeneID:132344533,GenBank:XP_059740204.1;Name=XP_059740204.1;gbkey=CDS;gene=LOC132344533;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740204.1;gene_id=Cattle_Y_G00010;transcript_id=Cattle_Y_T00011;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	181459	181605	.	-	2	ID=Cattle_Y_C00045;Parent=Cattle_Y_T00011;Dbxref=GeneID:132344533,GenBank:XP_059740204.1;Name=XP_059740204.1;gbkey=CDS;gene=LOC132344533;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740204.1;gene_id=Cattle_Y_G00010;transcript_id=Cattle_Y_T00011;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	183263	183437	.	-	0	ID=Cattle_Y_C00046;Parent=Cattle_Y_T00011;Dbxref=GeneID:132344533,GenBank:XP_059740204.1;Name=XP_059740204.1;gbkey=CDS;gene=LOC132344533;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740204.1;gene_id=Cattle_Y_G00010;transcript_id=Cattle_Y_T00011;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	185720	185826	.	-	2	ID=Cattle_Y_C00047;Parent=Cattle_Y_T00011;Dbxref=GeneID:132344533,GenBank:XP_059740204.1;Name=XP_059740204.1;gbkey=CDS;gene=LOC132344533;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740204.1;gene_id=Cattle_Y_G00010;transcript_id=Cattle_Y_T00011;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	186349	186457	.	-	0	ID=Cattle_Y_C00048;Parent=Cattle_Y_T00011;Dbxref=GeneID:132344533,GenBank:XP_059740204.1;Name=XP_059740204.1;gbkey=CDS;gene=LOC132344533;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740204.1;gene_id=Cattle_Y_G00010;transcript_id=Cattle_Y_T00011;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	191303	192255	.	+	.	ID=Cattle_Y_G00011;Dbxref=GeneID:132344565;Name=LOC132344565;description=etoposide-induced protein 2.4 homolog;gbkey=Gene;gene=LOC132344565;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00011;source_id=gene-LOC132344565
haplotype2-0000357	CAT	exon	191303	192255	.	+	.	ID=Cattle_Y_T00012;Parent=Cattle_Y_G00011;Dbxref=GeneID:132344565;gbkey=exon;gene=LOC132344565;model_evidence=Supporting evidence includes similarity to: 12 Proteins, and 11%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00011;transcript_id=Cattle_Y_T00012;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344565
haplotype2-0000357	CAT	gene	199470	210418	.	-	.	ID=Cattle_Y_G00012;Dbxref=GeneID:132344529;Name=LOC132344529;description=RNA-binding motif protein%2C X chromosome-like;gbkey=Gene;gene=LOC132344529;gene_biotype=protein_coding;gene_id=Cattle_Y_G00012;source_id=gene-LOC132344529
haplotype2-0000357	CAT	mRNA	199470	210418	.	-	.	ID=Cattle_Y_T00013;Parent=Cattle_Y_G00012;Dbxref=GeneID:132344529,GenBank:XM_059884217.1;Name=XM_059884217.1;gbkey=mRNA;gene=LOC132344529;model_evidence=Supporting evidence includes similarity to: 37 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=RNA-binding motif protein%2C X chromosome-like;transcript_id=Cattle_Y_T00013;gene_id=Cattle_Y_G00012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884217.1
haplotype2-0000357	CAT	exon	199470	202026	.	-	.	ID=Cattle_Y_E00052;Parent=Cattle_Y_T00013;Dbxref=GeneID:132344529,GenBank:XM_059884217.1;gbkey=mRNA;gene=LOC132344529;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00013;gene_id=Cattle_Y_G00012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884217.1-8
haplotype2-0000357	CAT	exon	202647	202735	.	-	.	ID=Cattle_Y_E00053;Parent=Cattle_Y_T00013;Dbxref=GeneID:132344529,GenBank:XM_059884217.1;gbkey=mRNA;gene=LOC132344529;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00013;gene_id=Cattle_Y_G00012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884217.1-7
haplotype2-0000357	CAT	exon	202812	202934	.	-	.	ID=Cattle_Y_E00054;Parent=Cattle_Y_T00013;Dbxref=GeneID:132344529,GenBank:XM_059884217.1;gbkey=mRNA;gene=LOC132344529;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00013;gene_id=Cattle_Y_G00012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884217.1-6
haplotype2-0000357	CAT	exon	204114	204225	.	-	.	ID=Cattle_Y_E00055;Parent=Cattle_Y_T00013;Dbxref=GeneID:132344529,GenBank:XM_059884217.1;gbkey=mRNA;gene=LOC132344529;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00013;gene_id=Cattle_Y_G00012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884217.1-5
haplotype2-0000357	CAT	exon	205389	205535	.	-	.	ID=Cattle_Y_E00056;Parent=Cattle_Y_T00013;Dbxref=GeneID:132344529,GenBank:XM_059884217.1;gbkey=mRNA;gene=LOC132344529;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00013;gene_id=Cattle_Y_G00012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884217.1-4
haplotype2-0000357	CAT	exon	207193	207367	.	-	.	ID=Cattle_Y_E00057;Parent=Cattle_Y_T00013;Dbxref=GeneID:132344529,GenBank:XM_059884217.1;gbkey=mRNA;gene=LOC132344529;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00013;gene_id=Cattle_Y_G00012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884217.1-3
haplotype2-0000357	CAT	exon	209650	209756	.	-	.	ID=Cattle_Y_E00058;Parent=Cattle_Y_T00013;Dbxref=GeneID:132344529,GenBank:XM_059884217.1;gbkey=mRNA;gene=LOC132344529;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00013;gene_id=Cattle_Y_G00012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884217.1-2
haplotype2-0000357	CAT	exon	210279	210418	.	-	.	ID=Cattle_Y_E00059;Parent=Cattle_Y_T00013;Dbxref=GeneID:132344529,GenBank:XM_059884217.1;gbkey=mRNA;gene=LOC132344529;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00013;gene_id=Cattle_Y_G00012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884217.1-1
haplotype2-0000357	CAT	CDS	201722	202026	.	-	2	ID=Cattle_Y_C00049;Parent=Cattle_Y_T00013;Dbxref=GeneID:132344529,GenBank:XP_059740200.1;Name=XP_059740200.1;gbkey=CDS;gene=LOC132344529;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740200.1;gene_id=Cattle_Y_G00012;transcript_id=Cattle_Y_T00013;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	202647	202735	.	-	1	ID=Cattle_Y_C00050;Parent=Cattle_Y_T00013;Dbxref=GeneID:132344529,GenBank:XP_059740200.1;Name=XP_059740200.1;gbkey=CDS;gene=LOC132344529;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740200.1;gene_id=Cattle_Y_G00012;transcript_id=Cattle_Y_T00013;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	202812	202934	.	-	1	ID=Cattle_Y_C00051;Parent=Cattle_Y_T00013;Dbxref=GeneID:132344529,GenBank:XP_059740200.1;Name=XP_059740200.1;gbkey=CDS;gene=LOC132344529;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740200.1;gene_id=Cattle_Y_G00012;transcript_id=Cattle_Y_T00013;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	204114	204225	.	-	2	ID=Cattle_Y_C00052;Parent=Cattle_Y_T00013;Dbxref=GeneID:132344529,GenBank:XP_059740200.1;Name=XP_059740200.1;gbkey=CDS;gene=LOC132344529;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740200.1;gene_id=Cattle_Y_G00012;transcript_id=Cattle_Y_T00013;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	205389	205535	.	-	2	ID=Cattle_Y_C00053;Parent=Cattle_Y_T00013;Dbxref=GeneID:132344529,GenBank:XP_059740200.1;Name=XP_059740200.1;gbkey=CDS;gene=LOC132344529;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740200.1;gene_id=Cattle_Y_G00012;transcript_id=Cattle_Y_T00013;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	207193	207367	.	-	0	ID=Cattle_Y_C00054;Parent=Cattle_Y_T00013;Dbxref=GeneID:132344529,GenBank:XP_059740200.1;Name=XP_059740200.1;gbkey=CDS;gene=LOC132344529;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740200.1;gene_id=Cattle_Y_G00012;transcript_id=Cattle_Y_T00013;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	209650	209756	.	-	2	ID=Cattle_Y_C00055;Parent=Cattle_Y_T00013;Dbxref=GeneID:132344529,GenBank:XP_059740200.1;Name=XP_059740200.1;gbkey=CDS;gene=LOC132344529;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740200.1;gene_id=Cattle_Y_G00012;transcript_id=Cattle_Y_T00013;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	210279	210387	.	-	0	ID=Cattle_Y_C00056;Parent=Cattle_Y_T00013;Dbxref=GeneID:132344529,GenBank:XP_059740200.1;Name=XP_059740200.1;gbkey=CDS;gene=LOC132344529;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740200.1;gene_id=Cattle_Y_G00012;transcript_id=Cattle_Y_T00013;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	215240	216192	.	+	.	ID=Cattle_Y_G00013;Dbxref=GeneID:132344562;Name=LOC132344562;description=etoposide-induced protein 2.4 homolog;gbkey=Gene;gene=LOC132344562;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00013;source_id=gene-LOC132344562
haplotype2-0000357	CAT	exon	215240	216192	.	+	.	ID=Cattle_Y_T00014;Parent=Cattle_Y_G00013;Dbxref=GeneID:132344562;gbkey=exon;gene=LOC132344562;model_evidence=Supporting evidence includes similarity to: 12 Proteins, and 11%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00013;transcript_id=Cattle_Y_T00014;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344562
haplotype2-0000357	CAT	gene	223409	234353	.	-	.	ID=Cattle_Y_G00014;Dbxref=GeneID:132344536;Name=LOC132344536;description=RNA-binding motif protein%2C X chromosome-like;gbkey=Gene;gene=LOC132344536;gene_biotype=protein_coding;gene_id=Cattle_Y_G00014;source_id=gene-LOC132344536
haplotype2-0000357	CAT	mRNA	223409	234353	.	-	.	ID=Cattle_Y_T00015;Parent=Cattle_Y_G00014;Dbxref=GeneID:132344536,GenBank:XM_059884224.1;Name=XM_059884224.1;gbkey=mRNA;gene=LOC132344536;model_evidence=Supporting evidence includes similarity to: 37 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=RNA-binding motif protein%2C X chromosome-like;transcript_id=Cattle_Y_T00015;gene_id=Cattle_Y_G00014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884224.1
haplotype2-0000357	CAT	exon	223409	225965	.	-	.	ID=Cattle_Y_E00060;Parent=Cattle_Y_T00015;Dbxref=GeneID:132344536,GenBank:XM_059884224.1;gbkey=mRNA;gene=LOC132344536;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00015;gene_id=Cattle_Y_G00014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884224.1-8
haplotype2-0000357	CAT	exon	226586	226674	.	-	.	ID=Cattle_Y_E00061;Parent=Cattle_Y_T00015;Dbxref=GeneID:132344536,GenBank:XM_059884224.1;gbkey=mRNA;gene=LOC132344536;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00015;gene_id=Cattle_Y_G00014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884224.1-7
haplotype2-0000357	CAT	exon	226751	226873	.	-	.	ID=Cattle_Y_E00062;Parent=Cattle_Y_T00015;Dbxref=GeneID:132344536,GenBank:XM_059884224.1;gbkey=mRNA;gene=LOC132344536;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00015;gene_id=Cattle_Y_G00014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884224.1-6
haplotype2-0000357	CAT	exon	228053	228164	.	-	.	ID=Cattle_Y_E00063;Parent=Cattle_Y_T00015;Dbxref=GeneID:132344536,GenBank:XM_059884224.1;gbkey=mRNA;gene=LOC132344536;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00015;gene_id=Cattle_Y_G00014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884224.1-5
haplotype2-0000357	CAT	exon	229324	229470	.	-	.	ID=Cattle_Y_E00064;Parent=Cattle_Y_T00015;Dbxref=GeneID:132344536,GenBank:XM_059884224.1;gbkey=mRNA;gene=LOC132344536;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00015;gene_id=Cattle_Y_G00014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884224.1-4
haplotype2-0000357	CAT	exon	231128	231302	.	-	.	ID=Cattle_Y_E00065;Parent=Cattle_Y_T00015;Dbxref=GeneID:132344536,GenBank:XM_059884224.1;gbkey=mRNA;gene=LOC132344536;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00015;gene_id=Cattle_Y_G00014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884224.1-3
haplotype2-0000357	CAT	exon	233585	233691	.	-	.	ID=Cattle_Y_E00066;Parent=Cattle_Y_T00015;Dbxref=GeneID:132344536,GenBank:XM_059884224.1;gbkey=mRNA;gene=LOC132344536;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00015;gene_id=Cattle_Y_G00014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884224.1-2
haplotype2-0000357	CAT	exon	234214	234353	.	-	.	ID=Cattle_Y_E00067;Parent=Cattle_Y_T00015;Dbxref=GeneID:132344536,GenBank:XM_059884224.1;gbkey=mRNA;gene=LOC132344536;product=RNA-binding motif protein, X chromosome-like;transcript_id=Cattle_Y_T00015;gene_id=Cattle_Y_G00014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884224.1-1
haplotype2-0000357	CAT	CDS	225661	225965	.	-	2	ID=Cattle_Y_C00057;Parent=Cattle_Y_T00015;Dbxref=GeneID:132344536,GenBank:XP_059740207.1;Name=XP_059740207.1;gbkey=CDS;gene=LOC132344536;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740207.1;gene_id=Cattle_Y_G00014;transcript_id=Cattle_Y_T00015;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	226586	226674	.	-	1	ID=Cattle_Y_C00058;Parent=Cattle_Y_T00015;Dbxref=GeneID:132344536,GenBank:XP_059740207.1;Name=XP_059740207.1;gbkey=CDS;gene=LOC132344536;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740207.1;gene_id=Cattle_Y_G00014;transcript_id=Cattle_Y_T00015;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	226751	226873	.	-	1	ID=Cattle_Y_C00059;Parent=Cattle_Y_T00015;Dbxref=GeneID:132344536,GenBank:XP_059740207.1;Name=XP_059740207.1;gbkey=CDS;gene=LOC132344536;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740207.1;gene_id=Cattle_Y_G00014;transcript_id=Cattle_Y_T00015;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	228053	228164	.	-	2	ID=Cattle_Y_C00060;Parent=Cattle_Y_T00015;Dbxref=GeneID:132344536,GenBank:XP_059740207.1;Name=XP_059740207.1;gbkey=CDS;gene=LOC132344536;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740207.1;gene_id=Cattle_Y_G00014;transcript_id=Cattle_Y_T00015;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	229324	229470	.	-	2	ID=Cattle_Y_C00061;Parent=Cattle_Y_T00015;Dbxref=GeneID:132344536,GenBank:XP_059740207.1;Name=XP_059740207.1;gbkey=CDS;gene=LOC132344536;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740207.1;gene_id=Cattle_Y_G00014;transcript_id=Cattle_Y_T00015;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	231128	231302	.	-	0	ID=Cattle_Y_C00062;Parent=Cattle_Y_T00015;Dbxref=GeneID:132344536,GenBank:XP_059740207.1;Name=XP_059740207.1;gbkey=CDS;gene=LOC132344536;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740207.1;gene_id=Cattle_Y_G00014;transcript_id=Cattle_Y_T00015;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	233585	233691	.	-	2	ID=Cattle_Y_C00063;Parent=Cattle_Y_T00015;Dbxref=GeneID:132344536,GenBank:XP_059740207.1;Name=XP_059740207.1;gbkey=CDS;gene=LOC132344536;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740207.1;gene_id=Cattle_Y_G00014;transcript_id=Cattle_Y_T00015;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	234214	234322	.	-	0	ID=Cattle_Y_C00064;Parent=Cattle_Y_T00015;Dbxref=GeneID:132344536,GenBank:XP_059740207.1;Name=XP_059740207.1;gbkey=CDS;gene=LOC132344536;product=RNA-binding motif protein, X chromosome-like;protein_id=XP_059740207.1;gene_id=Cattle_Y_G00014;transcript_id=Cattle_Y_T00015;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	239177	240129	.	+	.	ID=Cattle_Y_G00015;Dbxref=GeneID:132344558;Name=LOC132344558;description=etoposide-induced protein 2.4 homolog;gbkey=Gene;gene=LOC132344558;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00015;source_id=gene-LOC132344558
haplotype2-0000357	CAT	exon	239177	240129	.	+	.	ID=Cattle_Y_T00016;Parent=Cattle_Y_G00015;Dbxref=GeneID:132344558;gbkey=exon;gene=LOC132344558;model_evidence=Supporting evidence includes similarity to: 12 Proteins, and 11%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00015;transcript_id=Cattle_Y_T00016;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344558
haplotype2-0000357	CAT	gene	357534	366036	.	+	.	ID=Cattle_Y_G00016;Dbxref=GeneID:132344557;Name=LOC132344557;description=PI-PLC X domain-containing protein 1-like;gbkey=Gene;gene=LOC132344557;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00016;source_id=gene-LOC132344557
haplotype2-0000357	CAT	exon	357534	357652	.	+	.	ID=Cattle_Y_T00017;Parent=Cattle_Y_G00016;Dbxref=GeneID:132344557;gbkey=exon;gene=LOC132344557;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00016;transcript_id=Cattle_Y_T00017;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344557-6
haplotype2-0000357	CAT	exon	360048	360184	.	+	.	ID=Cattle_Y_T00018;Parent=Cattle_Y_G00016;Dbxref=GeneID:132344557;gbkey=exon;gene=LOC132344557;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00016;transcript_id=Cattle_Y_T00018;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344557-5
haplotype2-0000357	CAT	exon	362806	362927	.	+	.	ID=Cattle_Y_T00019;Parent=Cattle_Y_G00016;Dbxref=GeneID:132344557;gbkey=exon;gene=LOC132344557;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00016;transcript_id=Cattle_Y_T00019;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344557-4
haplotype2-0000357	CAT	exon	363944	364099	.	+	.	ID=Cattle_Y_T00020;Parent=Cattle_Y_G00016;Dbxref=GeneID:132344557;gbkey=exon;gene=LOC132344557;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00016;transcript_id=Cattle_Y_T00020;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344557-3
haplotype2-0000357	CAT	exon	364798	364978	.	+	.	ID=Cattle_Y_T00021;Parent=Cattle_Y_G00016;Dbxref=GeneID:132344557;gbkey=exon;gene=LOC132344557;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00016;transcript_id=Cattle_Y_T00021;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344557-2
haplotype2-0000357	CAT	exon	365800	366036	.	+	.	ID=Cattle_Y_T00022;Parent=Cattle_Y_G00016;Dbxref=GeneID:132344557;gbkey=exon;gene=LOC132344557;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00016;transcript_id=Cattle_Y_T00022;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344557
haplotype2-0000357	CAT	gene	509305	509802	.	-	.	ID=Cattle_Y_G00017;Dbxref=GeneID:132344556;Name=LOC132344556;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344556;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00017;source_id=gene-LOC132344556
haplotype2-0000357	CAT	exon	509305	509802	.	-	.	ID=Cattle_Y_T00023;Parent=Cattle_Y_G00017;Dbxref=GeneID:132344556;gbkey=exon;gene=LOC132344556;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00017;transcript_id=Cattle_Y_T00023;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344556
haplotype2-0000357	CAT	gene	795226	800054	.	+	.	ID=Cattle_Y_G00018;Dbxref=GeneID:132344555;Name=LOC132344555;description=protein Shroom2-like;gbkey=Gene;gene=LOC132344555;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00018;source_id=gene-LOC132344555
haplotype2-0000357	CAT	exon	795226	795317	.	+	.	ID=Cattle_Y_T00024;Parent=Cattle_Y_G00018;Dbxref=GeneID:132344555;gbkey=exon;gene=LOC132344555;model_evidence=Supporting evidence includes similarity to: 2 Proteins;pseudo=true;gene_id=Cattle_Y_G00018;transcript_id=Cattle_Y_T00024;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344555-3
haplotype2-0000357	CAT	exon	797659	798175	.	+	.	ID=Cattle_Y_T00025;Parent=Cattle_Y_G00018;Dbxref=GeneID:132344555;gbkey=exon;gene=LOC132344555;model_evidence=Supporting evidence includes similarity to: 2 Proteins;pseudo=true;gene_id=Cattle_Y_G00018;transcript_id=Cattle_Y_T00025;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344555-2
haplotype2-0000357	CAT	exon	799868	800054	.	+	.	ID=Cattle_Y_T00026;Parent=Cattle_Y_G00018;Dbxref=GeneID:132344555;gbkey=exon;gene=LOC132344555;model_evidence=Supporting evidence includes similarity to: 2 Proteins;pseudo=true;gene_id=Cattle_Y_G00018;transcript_id=Cattle_Y_T00026;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344555
haplotype2-0000357	CAT	gene	983840	1002919	.	+	.	ID=Cattle_Y_G00019;Dbxref=GeneID:132344554;Name=LOC132344554;description=protein Shroom2-like;gbkey=Gene;gene=LOC132344554;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00019;source_id=gene-LOC132344554
haplotype2-0000357	CAT	exon	983840	984331	.	+	.	ID=Cattle_Y_T00027;Parent=Cattle_Y_G00019;Dbxref=GeneID:132344554;gbkey=exon;gene=LOC132344554;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00019;transcript_id=Cattle_Y_T00027;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344554-6
haplotype2-0000357	CAT	exon	989571	989741	.	+	.	ID=Cattle_Y_T00028;Parent=Cattle_Y_G00019;Dbxref=GeneID:132344554;gbkey=exon;gene=LOC132344554;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00019;transcript_id=Cattle_Y_T00028;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344554-5
haplotype2-0000357	CAT	exon	989784	989787	.	+	.	ID=Cattle_Y_T00029;Parent=Cattle_Y_G00019;Dbxref=GeneID:132344554;gbkey=exon;gene=LOC132344554;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00019;transcript_id=Cattle_Y_T00029;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344554-4
haplotype2-0000357	CAT	exon	1000301	1000570	.	+	.	ID=Cattle_Y_T00030;Parent=Cattle_Y_G00019;Dbxref=GeneID:132344554;gbkey=exon;gene=LOC132344554;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00019;transcript_id=Cattle_Y_T00030;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344554-3
haplotype2-0000357	CAT	exon	1000751	1000764	.	+	.	ID=Cattle_Y_T00031;Parent=Cattle_Y_G00019;Dbxref=GeneID:132344554;gbkey=exon;gene=LOC132344554;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00019;transcript_id=Cattle_Y_T00031;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344554-2
haplotype2-0000357	CAT	exon	1002661	1002919	.	+	.	ID=Cattle_Y_T00032;Parent=Cattle_Y_G00019;Dbxref=GeneID:132344554;gbkey=exon;gene=LOC132344554;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00019;transcript_id=Cattle_Y_T00032;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344554
haplotype2-0000357	CAT	gene	1106261	1218998	.	-	.	ID=Cattle_Y_G00020;Dbxref=GeneID:132344720;Name=LOC132344720;description=uncharacterized LOC132344720;gbkey=Gene;gene=LOC132344720;gene_biotype=lncRNA;gene_id=Cattle_Y_G00020;source_id=gene-LOC132344720
haplotype2-0000357	CAT	lnc_RNA	1106261	1218998	.	-	.	ID=Cattle_Y_T00033;Parent=Cattle_Y_G00020;Dbxref=GeneID:132344720,GenBank:XR_009493663.1;Name=XR_009493663.1;gbkey=ncRNA;gene=LOC132344720;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 5 samples with support for all annotated introns;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T00033;gene_id=Cattle_Y_G00020;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=rna-XR_009493663.1
haplotype2-0000357	CAT	exon	1106261	1109389	.	-	.	ID=Cattle_Y_E00068;Parent=Cattle_Y_T00033;Dbxref=GeneID:132344720,GenBank:XR_009493663.1;gbkey=ncRNA;gene=LOC132344720;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T00033;gene_id=Cattle_Y_G00020;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493663.1-3
haplotype2-0000357	CAT	exon	1112132	1112191	.	-	.	ID=Cattle_Y_E00069;Parent=Cattle_Y_T00033;Dbxref=GeneID:132344720,GenBank:XR_009493663.1;gbkey=ncRNA;gene=LOC132344720;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T00033;gene_id=Cattle_Y_G00020;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493663.1-2
haplotype2-0000357	CAT	exon	1218810	1218998	.	-	.	ID=Cattle_Y_E00070;Parent=Cattle_Y_T00033;Dbxref=GeneID:132344720,GenBank:XR_009493663.1;gbkey=ncRNA;gene=LOC132344720;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T00033;gene_id=Cattle_Y_G00020;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493663.1-1
haplotype2-0000357	CAT	gene	1257482	1258171	.	+	.	ID=Cattle_Y_G00021;Dbxref=GeneID:280931;Name=SRY;description=sex determining region Y;gbkey=Gene;gene=SRY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00021;source_id=gene-SRY
haplotype2-0000357	CAT	mRNA	1257482	1258171	.	+	.	ID=Cattle_Y_T00034;Parent=Cattle_Y_G00021;Dbxref=GeneID:280931,GenBank:NM_001014385.1;Name=NM_001014385.1;gbkey=mRNA;gene=SRY;product=sex determining region Y;transcript_id=Cattle_Y_T00034;gene_id=Cattle_Y_G00021;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001014385.1
haplotype2-0000357	CAT	exon	1257482	1258171	.	+	.	ID=Cattle_Y_E00071;Parent=Cattle_Y_T00034;Dbxref=GeneID:280931,GenBank:NM_001014385.1;gbkey=mRNA;gene=SRY;product=sex determining region Y;transcript_id=Cattle_Y_T00034;gene_id=Cattle_Y_G00021;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001014385.1-1
haplotype2-0000357	CAT	CDS	1257482	1258171	.	+	0	ID=Cattle_Y_C00065;Parent=Cattle_Y_T00034;Dbxref=GeneID:280931,GenBank:NP_001014407.1;Name=NP_001014407.1;gbkey=CDS;gene=SRY;product=sex-determining region Y protein;protein_id=NP_001014407.1;gene_id=Cattle_Y_G00021;transcript_id=Cattle_Y_T00034;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	1362200	1364103	.	+	.	ID=Cattle_Y_G00022;Dbxref=GeneID:132344659;Name=LOC132344659;description=testis-specific Y-encoded protein 1-like;end_range=24663580,.;gbkey=Gene;gene=LOC132344659;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00022;source_id=gene-LOC132344659
haplotype2-0000357	CAT	mRNA	1362200	1364103	.	+	.	ID=Cattle_Y_T00035;Parent=Cattle_Y_G00022;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;Name=XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00035;gene_id=Cattle_Y_G00022;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884304.1
haplotype2-0000357	CAT	exon	1362200	1362520	.	+	.	ID=Cattle_Y_E00072;Parent=Cattle_Y_T00035;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00035;gene_id=Cattle_Y_G00022;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-1
haplotype2-0000357	CAT	exon	1363298	1363373	.	+	.	ID=Cattle_Y_E00073;Parent=Cattle_Y_T00035;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00035;gene_id=Cattle_Y_G00022;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-2
haplotype2-0000357	CAT	exon	1363557	1363670	.	+	.	ID=Cattle_Y_E00074;Parent=Cattle_Y_T00035;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00035;gene_id=Cattle_Y_G00022;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-3
haplotype2-0000357	CAT	exon	1363764	1363909	.	+	.	ID=Cattle_Y_E00075;Parent=Cattle_Y_T00035;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00035;gene_id=Cattle_Y_G00022;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-4
haplotype2-0000357	CAT	exon	1364026	1364103	.	+	.	ID=Cattle_Y_E00076;Parent=Cattle_Y_T00035;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00035;gene_id=Cattle_Y_G00022;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-5
haplotype2-0000357	CAT	CDS	1362200	1362520	.	+	0	ID=Cattle_Y_C00066;Parent=Cattle_Y_T00035;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;end_range=24663580,.;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_1;gene_id=Cattle_Y_G00022;transcript_id=Cattle_Y_T00035;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	1363298	1363373	.	+	0	ID=Cattle_Y_C00067;Parent=Cattle_Y_T00035;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_1;gene_id=Cattle_Y_G00022;transcript_id=Cattle_Y_T00035;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	1363557	1363670	.	+	2	ID=Cattle_Y_C00068;Parent=Cattle_Y_T00035;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_1;gene_id=Cattle_Y_G00022;transcript_id=Cattle_Y_T00035;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	1363764	1363909	.	+	2	ID=Cattle_Y_C00069;Parent=Cattle_Y_T00035;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_1;gene_id=Cattle_Y_G00022;transcript_id=Cattle_Y_T00035;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	1364026	1364103	.	+	0	ID=Cattle_Y_C00070;Parent=Cattle_Y_T00035;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_1;gene_id=Cattle_Y_G00022;transcript_id=Cattle_Y_T00035;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	1469523	1500567	.	+	.	ID=Cattle_Y_G00023;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00023;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	1469523	1500567	.	+	.	ID=Cattle_Y_T00036;Parent=Cattle_Y_G00023;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00036;gene_id=Cattle_Y_G00023;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	1469523	1469662	.	+	.	ID=Cattle_Y_E00077;Parent=Cattle_Y_T00036;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00036;gene_id=Cattle_Y_G00023;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	1498733	1500567	.	+	.	ID=Cattle_Y_E00078;Parent=Cattle_Y_T00036;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00036;gene_id=Cattle_Y_G00023;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	1498959	1500567	.	+	0	ID=Cattle_Y_C00071;Parent=Cattle_Y_T00036;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_31;gene_id=Cattle_Y_G00023;transcript_id=Cattle_Y_T00036;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	1509749	1511640	.	-	.	ID=Cattle_Y_G00024;Dbxref=GeneID:132344659;Name=LOC132344659;description=testis-specific Y-encoded protein 1-like;end_range=24663580,.;gbkey=Gene;gene=LOC132344659;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00024;source_id=gene-LOC132344659
haplotype2-0000357	CAT	mRNA	1509749	1511640	.	-	.	ID=Cattle_Y_T00037;Parent=Cattle_Y_G00024;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;Name=XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00037;gene_id=Cattle_Y_G00024;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884304.1
haplotype2-0000357	CAT	exon	1509749	1509826	.	-	.	ID=Cattle_Y_E00079;Parent=Cattle_Y_T00037;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00037;gene_id=Cattle_Y_G00024;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-5
haplotype2-0000357	CAT	exon	1509943	1510088	.	-	.	ID=Cattle_Y_E00080;Parent=Cattle_Y_T00037;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00037;gene_id=Cattle_Y_G00024;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-4
haplotype2-0000357	CAT	exon	1510184	1510297	.	-	.	ID=Cattle_Y_E00081;Parent=Cattle_Y_T00037;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00037;gene_id=Cattle_Y_G00024;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-3
haplotype2-0000357	CAT	exon	1510481	1510556	.	-	.	ID=Cattle_Y_E00082;Parent=Cattle_Y_T00037;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00037;gene_id=Cattle_Y_G00024;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-2
haplotype2-0000357	CAT	exon	1511320	1511640	.	-	.	ID=Cattle_Y_E00083;Parent=Cattle_Y_T00037;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00037;gene_id=Cattle_Y_G00024;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-1
haplotype2-0000357	CAT	CDS	1509749	1509826	.	-	0	ID=Cattle_Y_C00072;Parent=Cattle_Y_T00037;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_12;gene_id=Cattle_Y_G00024;transcript_id=Cattle_Y_T00037;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	1509943	1510088	.	-	2	ID=Cattle_Y_C00073;Parent=Cattle_Y_T00037;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_12;gene_id=Cattle_Y_G00024;transcript_id=Cattle_Y_T00037;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	1510184	1510297	.	-	2	ID=Cattle_Y_C00074;Parent=Cattle_Y_T00037;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_12;gene_id=Cattle_Y_G00024;transcript_id=Cattle_Y_T00037;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	1510481	1510556	.	-	0	ID=Cattle_Y_C00075;Parent=Cattle_Y_T00037;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_12;gene_id=Cattle_Y_G00024;transcript_id=Cattle_Y_T00037;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	1511320	1511640	.	-	0	ID=Cattle_Y_C00076;Parent=Cattle_Y_T00037;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;end_range=24663580,.;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_12;gene_id=Cattle_Y_G00024;transcript_id=Cattle_Y_T00037;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	1549068	1560006	.	+	.	ID=Cattle_Y_G00025;Dbxref=GeneID:132344681;Name=LOC132344681;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344681;gene_biotype=protein_coding;gene_id=Cattle_Y_G00025;source_id=gene-LOC132344681
haplotype2-0000357	CAT	mRNA	1549068	1560006	.	+	.	ID=Cattle_Y_T00038;Parent=Cattle_Y_G00025;Dbxref=GeneID:132344681,GenBank:XM_059884321.1;Name=XM_059884321.1;gbkey=mRNA;gene=LOC132344681;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00038;gene_id=Cattle_Y_G00025;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884321.1
haplotype2-0000357	CAT	exon	1549068	1549193	.	+	.	ID=Cattle_Y_E00084;Parent=Cattle_Y_T00038;Dbxref=GeneID:132344681,GenBank:XM_059884321.1;gbkey=mRNA;gene=LOC132344681;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00038;gene_id=Cattle_Y_G00025;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884321.1-1
haplotype2-0000357	CAT	exon	1558199	1560006	.	+	.	ID=Cattle_Y_E00085;Parent=Cattle_Y_T00038;Dbxref=GeneID:132344681,GenBank:XM_059884321.1;gbkey=mRNA;gene=LOC132344681;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00038;gene_id=Cattle_Y_G00025;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884321.1-2
haplotype2-0000357	CAT	CDS	1558270	1559901	.	+	0	ID=Cattle_Y_C00077;Parent=Cattle_Y_T00038;Dbxref=GeneID:132344681,GenBank:XP_059740304.1;Name=XP_059740304.1;gbkey=CDS;gene=LOC132344681;product=zinc finger protein 280B-like;protein_id=XP_059740304.1_2;gene_id=Cattle_Y_G00025;transcript_id=Cattle_Y_T00038;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	1564295	1564822	.	+	.	ID=Cattle_Y_G00026;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00026;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	1564295	1564822	.	+	.	ID=Cattle_Y_T00039;Parent=Cattle_Y_G00026;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00039;gene_id=Cattle_Y_G00026;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	1564295	1564418	.	+	.	ID=Cattle_Y_E00086;Parent=Cattle_Y_T00039;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00039;gene_id=Cattle_Y_G00026;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	1564491	1564822	.	+	.	ID=Cattle_Y_E00087;Parent=Cattle_Y_T00039;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00039;gene_id=Cattle_Y_G00026;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	1564295	1564418	.	+	0	ID=Cattle_Y_C00078;Parent=Cattle_Y_T00039;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_19;gene_id=Cattle_Y_G00026;transcript_id=Cattle_Y_T00039;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	1564491	1564822	.	+	2	ID=Cattle_Y_C00079;Parent=Cattle_Y_T00039;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_19;gene_id=Cattle_Y_G00026;transcript_id=Cattle_Y_T00039;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	1590584	1591125	.	-	.	ID=Cattle_Y_G00027;Dbxref=GeneID:132344657;Name=LOC132344657;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344657;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00027;source_id=gene-LOC132344657
haplotype2-0000357	CAT	mRNA	1590584	1591125	.	-	.	ID=Cattle_Y_T00040;Parent=Cattle_Y_G00027;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;Name=XM_059884302.1;gbkey=mRNA;gene=LOC132344657;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00040;gene_id=Cattle_Y_G00027;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884302.1
haplotype2-0000357	CAT	exon	1590584	1590936	.	-	.	ID=Cattle_Y_E00088;Parent=Cattle_Y_T00040;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00040;gene_id=Cattle_Y_G00027;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-2
haplotype2-0000357	CAT	exon	1591000	1591125	.	-	.	ID=Cattle_Y_E00089;Parent=Cattle_Y_T00040;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00040;gene_id=Cattle_Y_G00027;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-1
haplotype2-0000357	CAT	CDS	1590584	1590807	.	-	0	ID=Cattle_Y_C00080;Parent=Cattle_Y_T00040;Dbxref=GeneID:132344657,GenBank:XP_059740285.1;Name=XP_059740285.1;gbkey=CDS;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740285.1_4;gene_id=Cattle_Y_G00027;transcript_id=Cattle_Y_T00040;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	1658397	1659127	.	-	.	ID=Cattle_Y_G00028;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00028;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	1665766	1667563	.	+	.	ID=Cattle_Y_G00029;Dbxref=GeneID:132344701;Name=LOC132344701;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344701;gene_biotype=protein_coding;gene_id=Cattle_Y_G00029;source_id=gene-LOC132344701
haplotype2-0000357	CAT	mRNA	1665766	1667563	.	+	.	ID=Cattle_Y_T00041;Parent=Cattle_Y_G00029;Dbxref=GeneID:132344701,GenBank:XM_059884343.1;Name=XM_059884343.1;gbkey=mRNA;gene=LOC132344701;model_evidence=Supporting evidence includes similarity to: 4 Proteins%2C 1 long SRA read%2C and 78%25 coverage of the annotated genomic feature by RNAseq alignments;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00041;gene_id=Cattle_Y_G00029;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884343.1
haplotype2-0000357	CAT	exon	1665766	1666289	.	+	.	ID=Cattle_Y_E00090;Parent=Cattle_Y_T00041;Dbxref=GeneID:132344701,GenBank:XM_059884343.1;gbkey=mRNA;gene=LOC132344701;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00041;gene_id=Cattle_Y_G00029;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884343.1-1
haplotype2-0000357	CAT	exon	1666720	1667563	.	+	.	ID=Cattle_Y_E00091;Parent=Cattle_Y_T00041;Dbxref=GeneID:132344701,GenBank:XM_059884343.1;gbkey=mRNA;gene=LOC132344701;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00041;gene_id=Cattle_Y_G00029;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884343.1-2
haplotype2-0000357	CAT	CDS	1665780	1666289	.	+	0	ID=Cattle_Y_C00081;Parent=Cattle_Y_T00041;Dbxref=GeneID:132344701,GenBank:XP_059740326.1;Name=XP_059740326.1;gbkey=CDS;gene=LOC132344701;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740326.1_1;gene_id=Cattle_Y_G00029;transcript_id=Cattle_Y_T00041;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	1666720	1667454	.	+	0	ID=Cattle_Y_C00082;Parent=Cattle_Y_T00041;Dbxref=GeneID:132344701,GenBank:XP_059740326.1;Name=XP_059740326.1;gbkey=CDS;gene=LOC132344701;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740326.1_1;gene_id=Cattle_Y_G00029;transcript_id=Cattle_Y_T00041;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	1872014	1874172	.	-	.	ID=Cattle_Y_G00030;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00030;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	1872014	1872091	.	-	.	ID=Cattle_Y_T00042;Parent=Cattle_Y_G00030;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00030;transcript_id=Cattle_Y_T00042;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	exon	1872208	1872353	.	-	.	ID=Cattle_Y_T00043;Parent=Cattle_Y_G00030;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00030;transcript_id=Cattle_Y_T00043;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	1872449	1872560	.	-	.	ID=Cattle_Y_T00044;Parent=Cattle_Y_G00030;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00030;transcript_id=Cattle_Y_T00044;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	1872744	1872821	.	-	.	ID=Cattle_Y_T00045;Parent=Cattle_Y_G00030;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00030;transcript_id=Cattle_Y_T00045;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	1873623	1874017	.	-	.	ID=Cattle_Y_T00046;Parent=Cattle_Y_G00030;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00030;transcript_id=Cattle_Y_T00046;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	1874100	1874172	.	-	.	ID=Cattle_Y_T00047;Parent=Cattle_Y_G00030;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00030;transcript_id=Cattle_Y_T00047;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	gene	1965219	1965902	.	-	.	ID=Cattle_Y_G00031;Dbxref=GeneID:132344684;Name=LOC132344684;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344684;gene_biotype=protein_coding;partial=true;start_range=.,32593470;gene_id=Cattle_Y_G00031;source_id=gene-LOC132344684
haplotype2-0000357	CAT	mRNA	1965219	1965902	.	-	.	ID=Cattle_Y_T00048;Parent=Cattle_Y_G00031;Dbxref=GeneID:132344684,GenBank:XM_059884325.1;Name=XM_059884325.1;gbkey=mRNA;gene=LOC132344684;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,32593470;transcript_id=Cattle_Y_T00048;gene_id=Cattle_Y_G00031;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884325.1
haplotype2-0000357	CAT	exon	1965219	1965902	.	-	.	ID=Cattle_Y_E00092;Parent=Cattle_Y_T00048;Dbxref=GeneID:132344684,GenBank:XM_059884325.1;gbkey=mRNA;gene=LOC132344684;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,32593470;transcript_id=Cattle_Y_T00048;gene_id=Cattle_Y_G00031;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884325.1-1
haplotype2-0000357	CAT	CDS	1965219	1965782	.	-	0	ID=Cattle_Y_C00083;Parent=Cattle_Y_T00048;Dbxref=GeneID:132344684,GenBank:XP_059740308.1;Name=XP_059740308.1;gbkey=CDS;gene=LOC132344684;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740308.1;start_range=.,32593470;gene_id=Cattle_Y_G00031;transcript_id=Cattle_Y_T00048;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	2041878	2042452	.	+	.	ID=Cattle_Y_G00032;Dbxref=GeneID:132344660;Name=LOC132344660;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344660;gene_biotype=likely_pseudogene;partial=true;start_range=.,24728184;gene_id=Cattle_Y_G00032;source_id=gene-LOC132344660
haplotype2-0000357	CAT	mRNA	2041878	2042452	.	+	.	ID=Cattle_Y_T00049;Parent=Cattle_Y_G00032;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;Name=XM_059884305.1;gbkey=mRNA;gene=LOC132344660;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00049;gene_id=Cattle_Y_G00032;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884305.1
haplotype2-0000357	CAT	exon	2041878	2042003	.	+	.	ID=Cattle_Y_E00093;Parent=Cattle_Y_T00049;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00049;gene_id=Cattle_Y_G00032;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-1
haplotype2-0000357	CAT	exon	2042067	2042452	.	+	.	ID=Cattle_Y_E00094;Parent=Cattle_Y_T00049;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00049;gene_id=Cattle_Y_G00032;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-2
haplotype2-0000357	CAT	CDS	2042196	2042452	.	+	0	ID=Cattle_Y_C00084;Parent=Cattle_Y_T00049;Dbxref=GeneID:132344660,GenBank:XP_059740288.1;Name=XP_059740288.1;gbkey=CDS;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740288.1_6;start_range=.,24728184;gene_id=Cattle_Y_G00032;transcript_id=Cattle_Y_T00049;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	2075456	2075983	.	-	.	ID=Cattle_Y_G00033;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00033;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	2075456	2075983	.	-	.	ID=Cattle_Y_T00050;Parent=Cattle_Y_G00033;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00050;gene_id=Cattle_Y_G00033;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	2075456	2075787	.	-	.	ID=Cattle_Y_E00095;Parent=Cattle_Y_T00050;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00050;gene_id=Cattle_Y_G00033;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	exon	2075860	2075983	.	-	.	ID=Cattle_Y_E00096;Parent=Cattle_Y_T00050;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00050;gene_id=Cattle_Y_G00033;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	CDS	2075456	2075787	.	-	2	ID=Cattle_Y_C00085;Parent=Cattle_Y_T00050;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_28;gene_id=Cattle_Y_G00033;transcript_id=Cattle_Y_T00050;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	2075860	2075983	.	-	0	ID=Cattle_Y_C00086;Parent=Cattle_Y_T00050;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_28;gene_id=Cattle_Y_G00033;transcript_id=Cattle_Y_T00050;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	2080300	2091343	.	-	.	ID=Cattle_Y_G00034;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00034;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	2080300	2091343	.	-	.	ID=Cattle_Y_T00051;Parent=Cattle_Y_G00034;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00051;gene_id=Cattle_Y_G00034;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	2080300	2082107	.	-	.	ID=Cattle_Y_E00097;Parent=Cattle_Y_T00051;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00051;gene_id=Cattle_Y_G00034;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-2
haplotype2-0000357	CAT	exon	2091216	2091343	.	-	.	ID=Cattle_Y_E00098;Parent=Cattle_Y_T00051;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00051;gene_id=Cattle_Y_G00034;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	CDS	2080405	2082036	.	-	0	ID=Cattle_Y_C00087;Parent=Cattle_Y_T00051;Dbxref=GeneID:768254,GenBank:NP_001071588.1,BGD:BT17804;Name=NP_001071588.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ZNF280BY;inference=similar to AA sequence (same species):RefSeq:NP_001071588.1;product=zinc finger protein 280B;protein_id=NP_001071588.1_23;gene_id=Cattle_Y_G00034;transcript_id=Cattle_Y_T00051;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	2097439	2098176	.	-	.	ID=Cattle_Y_G00035;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00035;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	2097439	2098176	.	-	.	ID=Cattle_Y_T00052;Parent=Cattle_Y_G00035;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00035;transcript_id=Cattle_Y_T00052;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	2128717	2130653	.	+	.	ID=Cattle_Y_G00036;Dbxref=GeneID:132344672;Name=LOC132344672;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344672;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00036;source_id=gene-LOC132344672
haplotype2-0000357	CAT	exon	2128717	2129099	.	+	.	ID=Cattle_Y_T00053;Parent=Cattle_Y_G00036;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00036;transcript_id=Cattle_Y_T00053;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-5
haplotype2-0000357	CAT	exon	2129846	2129921	.	+	.	ID=Cattle_Y_T00054;Parent=Cattle_Y_G00036;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00036;transcript_id=Cattle_Y_T00054;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-4
haplotype2-0000357	CAT	exon	2130105	2130218	.	+	.	ID=Cattle_Y_T00055;Parent=Cattle_Y_G00036;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00036;transcript_id=Cattle_Y_T00055;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-3
haplotype2-0000357	CAT	exon	2130314	2130459	.	+	.	ID=Cattle_Y_T00056;Parent=Cattle_Y_G00036;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00036;transcript_id=Cattle_Y_T00056;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-2
haplotype2-0000357	CAT	exon	2130576	2130653	.	+	.	ID=Cattle_Y_T00057;Parent=Cattle_Y_G00036;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00036;transcript_id=Cattle_Y_T00057;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672
haplotype2-0000357	CAT	gene	2139756	2170801	.	-	.	ID=Cattle_Y_G00037;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00037;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	2139756	2170801	.	-	.	ID=Cattle_Y_T00058;Parent=Cattle_Y_G00037;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00058;gene_id=Cattle_Y_G00037;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	2139756	2141592	.	-	.	ID=Cattle_Y_E00099;Parent=Cattle_Y_T00058;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00058;gene_id=Cattle_Y_G00037;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	exon	2170662	2170801	.	-	.	ID=Cattle_Y_E00100;Parent=Cattle_Y_T00058;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00058;gene_id=Cattle_Y_G00037;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	CDS	2139756	2141366	.	-	0	ID=Cattle_Y_C00088;Parent=Cattle_Y_T00058;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_7;gene_id=Cattle_Y_G00037;transcript_id=Cattle_Y_T00058;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	2232512	2263533	.	+	.	ID=Cattle_Y_G00038;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00038;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	2232512	2263533	.	+	.	ID=Cattle_Y_T00059;Parent=Cattle_Y_G00038;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00059;gene_id=Cattle_Y_G00038;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	2232512	2232651	.	+	.	ID=Cattle_Y_E00101;Parent=Cattle_Y_T00059;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00059;gene_id=Cattle_Y_G00038;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	2261705	2263533	.	+	.	ID=Cattle_Y_E00102;Parent=Cattle_Y_T00059;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00059;gene_id=Cattle_Y_G00038;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	2261931	2263533	.	+	0	ID=Cattle_Y_C00089;Parent=Cattle_Y_T00059;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_5;gene_id=Cattle_Y_G00038;transcript_id=Cattle_Y_T00059;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	2272635	2274610	.	-	.	ID=Cattle_Y_G00039;Dbxref=GeneID:132344672;Name=LOC132344672;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344672;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00039;source_id=gene-LOC132344672
haplotype2-0000357	CAT	exon	2272635	2272712	.	-	.	ID=Cattle_Y_T00060;Parent=Cattle_Y_G00039;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00039;transcript_id=Cattle_Y_T00060;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672
haplotype2-0000357	CAT	exon	2272829	2272974	.	-	.	ID=Cattle_Y_T00061;Parent=Cattle_Y_G00039;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00039;transcript_id=Cattle_Y_T00061;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-2
haplotype2-0000357	CAT	exon	2273070	2273183	.	-	.	ID=Cattle_Y_T00062;Parent=Cattle_Y_G00039;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00039;transcript_id=Cattle_Y_T00062;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-3
haplotype2-0000357	CAT	exon	2273367	2273442	.	-	.	ID=Cattle_Y_T00063;Parent=Cattle_Y_G00039;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00039;transcript_id=Cattle_Y_T00063;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-4
haplotype2-0000357	CAT	exon	2274228	2274610	.	-	.	ID=Cattle_Y_T00064;Parent=Cattle_Y_G00039;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00039;transcript_id=Cattle_Y_T00064;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-5
haplotype2-0000357	CAT	gene	2305156	2305893	.	+	.	ID=Cattle_Y_G00040;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00040;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	2305156	2305893	.	+	.	ID=Cattle_Y_T00065;Parent=Cattle_Y_G00040;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00040;transcript_id=Cattle_Y_T00065;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	2311979	2322989	.	+	.	ID=Cattle_Y_G00041;Dbxref=GeneID:132344705;Name=LOC132344705;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344705;gene_biotype=protein_coding;gene_id=Cattle_Y_G00041;source_id=gene-LOC132344705
haplotype2-0000357	CAT	mRNA	2311979	2322989	.	+	.	ID=Cattle_Y_T00066;Parent=Cattle_Y_G00041;Dbxref=GeneID:132344705,GenBank:XM_059884349.1;Name=XM_059884349.1;gbkey=mRNA;gene=LOC132344705;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00066;gene_id=Cattle_Y_G00041;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884349.1
haplotype2-0000357	CAT	exon	2311979	2312129	.	+	.	ID=Cattle_Y_E00103;Parent=Cattle_Y_T00066;Dbxref=GeneID:132344705,GenBank:XM_059884349.1;gbkey=mRNA;gene=LOC132344705;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00066;gene_id=Cattle_Y_G00041;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884349.1-1
haplotype2-0000357	CAT	exon	2321190	2322989	.	+	.	ID=Cattle_Y_E00104;Parent=Cattle_Y_T00066;Dbxref=GeneID:132344705,GenBank:XM_059884349.1;gbkey=mRNA;gene=LOC132344705;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00066;gene_id=Cattle_Y_G00041;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884349.1-2
haplotype2-0000357	CAT	CDS	2321261	2322989	.	+	0	ID=Cattle_Y_C00090;Parent=Cattle_Y_T00066;gene_id=Cattle_Y_G00041;transcript_id=Cattle_Y_T00066;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	2342483	2353033	.	+	.	ID=Cattle_Y_G00042;Dbxref=GeneID:132344542;Name=LOC132344542;description=uncharacterized LOC132344542;gbkey=Gene;gene=LOC132344542;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00042;source_id=gene-LOC132344542
haplotype2-0000357	CAT	exon	2342483	2342875	.	+	.	ID=Cattle_Y_T00067;Parent=Cattle_Y_G00042;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00042;transcript_id=Cattle_Y_T00067;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542
haplotype2-0000357	CAT	exon	2350213	2350351	.	+	.	ID=Cattle_Y_T00068;Parent=Cattle_Y_G00042;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00042;transcript_id=Cattle_Y_T00068;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542-2
haplotype2-0000357	CAT	exon	2351060	2351175	.	+	.	ID=Cattle_Y_T00069;Parent=Cattle_Y_G00042;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00042;transcript_id=Cattle_Y_T00069;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542-3
haplotype2-0000357	CAT	exon	2352894	2353033	.	+	.	ID=Cattle_Y_T00070;Parent=Cattle_Y_G00042;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00042;transcript_id=Cattle_Y_T00070;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542-4
haplotype2-0000357	CAT	gene	2477529	2479691	.	+	.	ID=Cattle_Y_G00043;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00043;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	2477529	2477601	.	+	.	ID=Cattle_Y_T00071;Parent=Cattle_Y_G00043;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00043;transcript_id=Cattle_Y_T00071;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	exon	2477684	2478078	.	+	.	ID=Cattle_Y_T00072;Parent=Cattle_Y_G00043;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00043;transcript_id=Cattle_Y_T00072;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	2478884	2478961	.	+	.	ID=Cattle_Y_T00073;Parent=Cattle_Y_G00043;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00043;transcript_id=Cattle_Y_T00073;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	2479145	2479256	.	+	.	ID=Cattle_Y_T00074;Parent=Cattle_Y_G00043;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00043;transcript_id=Cattle_Y_T00074;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	2479352	2479497	.	+	.	ID=Cattle_Y_T00075;Parent=Cattle_Y_G00043;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00043;transcript_id=Cattle_Y_T00075;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	2479614	2479691	.	+	.	ID=Cattle_Y_T00076;Parent=Cattle_Y_G00043;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00043;transcript_id=Cattle_Y_T00076;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	gene	2533479	2564505	.	+	.	ID=Cattle_Y_G00044;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00044;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	2533479	2564505	.	+	.	ID=Cattle_Y_T00077;Parent=Cattle_Y_G00044;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00077;gene_id=Cattle_Y_G00044;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	2533479	2533618	.	+	.	ID=Cattle_Y_E00105;Parent=Cattle_Y_T00077;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00077;gene_id=Cattle_Y_G00044;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	2562670	2564505	.	+	.	ID=Cattle_Y_E00106;Parent=Cattle_Y_T00077;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00077;gene_id=Cattle_Y_G00044;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	2562897	2564505	.	+	0	ID=Cattle_Y_C00091;Parent=Cattle_Y_T00077;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_28;gene_id=Cattle_Y_G00044;transcript_id=Cattle_Y_T00077;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	2573614	2575735	.	-	.	ID=Cattle_Y_G00045;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00045;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	2573614	2575735	.	-	.	ID=Cattle_Y_T00078;Parent=Cattle_Y_G00045;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00078;gene_id=Cattle_Y_G00045;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	2573614	2573691	.	-	.	ID=Cattle_Y_E00107;Parent=Cattle_Y_T00078;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00078;gene_id=Cattle_Y_G00045;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	2573808	2573953	.	-	.	ID=Cattle_Y_E00108;Parent=Cattle_Y_T00078;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00078;gene_id=Cattle_Y_G00045;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	2574049	2574162	.	-	.	ID=Cattle_Y_E00109;Parent=Cattle_Y_T00078;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00078;gene_id=Cattle_Y_G00045;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	2574346	2574421	.	-	.	ID=Cattle_Y_E00110;Parent=Cattle_Y_T00078;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00078;gene_id=Cattle_Y_G00045;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	2575195	2575589	.	-	.	ID=Cattle_Y_E00111;Parent=Cattle_Y_T00078;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00078;gene_id=Cattle_Y_G00045;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	2575672	2575735	.	-	.	ID=Cattle_Y_E00112;Parent=Cattle_Y_T00078;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00078;gene_id=Cattle_Y_G00045;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	2573614	2573691	.	-	0	ID=Cattle_Y_C00092;Parent=Cattle_Y_T00078;gene_id=Cattle_Y_G00045;transcript_id=Cattle_Y_T00078;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	2573808	2573953	.	-	2	ID=Cattle_Y_C00093;Parent=Cattle_Y_T00078;gene_id=Cattle_Y_G00045;transcript_id=Cattle_Y_T00078;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	2574049	2574162	.	-	2	ID=Cattle_Y_C00094;Parent=Cattle_Y_T00078;gene_id=Cattle_Y_G00045;transcript_id=Cattle_Y_T00078;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	2574346	2574421	.	-	0	ID=Cattle_Y_C00095;Parent=Cattle_Y_T00078;gene_id=Cattle_Y_G00045;transcript_id=Cattle_Y_T00078;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	2575195	2575589	.	-	2	ID=Cattle_Y_C00096;Parent=Cattle_Y_T00078;gene_id=Cattle_Y_G00045;transcript_id=Cattle_Y_T00078;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	2575672	2575735	.	-	0	ID=Cattle_Y_C00097;Parent=Cattle_Y_T00078;gene_id=Cattle_Y_G00045;transcript_id=Cattle_Y_T00078;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	2603209	2603946	.	+	.	ID=Cattle_Y_G00046;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00046;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	2603209	2603946	.	+	.	ID=Cattle_Y_T00079;Parent=Cattle_Y_G00046;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00046;transcript_id=Cattle_Y_T00079;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	2610039	2621475	.	+	.	ID=Cattle_Y_G00047;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00047;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	2610039	2621475	.	+	.	ID=Cattle_Y_T00080;Parent=Cattle_Y_G00047;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00080;gene_id=Cattle_Y_G00047;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	2610039	2610166	.	+	.	ID=Cattle_Y_E00113;Parent=Cattle_Y_T00080;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00080;gene_id=Cattle_Y_G00047;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	exon	2619668	2621475	.	+	.	ID=Cattle_Y_E00114;Parent=Cattle_Y_T00080;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00080;gene_id=Cattle_Y_G00047;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-2
haplotype2-0000357	CAT	CDS	2619739	2621370	.	+	0	ID=Cattle_Y_C00098;Parent=Cattle_Y_T00080;Dbxref=GeneID:768254,GenBank:NP_001071588.1,BGD:BT17804;Name=NP_001071588.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ZNF280BY;inference=similar to AA sequence (same species):RefSeq:NP_001071588.1;product=zinc finger protein 280B;protein_id=NP_001071588.1_29;gene_id=Cattle_Y_G00047;transcript_id=Cattle_Y_T00080;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	2625793	2626320	.	+	.	ID=Cattle_Y_G00048;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00048;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	2625793	2626320	.	+	.	ID=Cattle_Y_T00081;Parent=Cattle_Y_G00048;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00081;gene_id=Cattle_Y_G00048;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	2625793	2625916	.	+	.	ID=Cattle_Y_E00115;Parent=Cattle_Y_T00081;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00081;gene_id=Cattle_Y_G00048;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	2625989	2626320	.	+	.	ID=Cattle_Y_E00116;Parent=Cattle_Y_T00081;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00081;gene_id=Cattle_Y_G00048;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	2625793	2625916	.	+	0	ID=Cattle_Y_C00099;Parent=Cattle_Y_T00081;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_50;gene_id=Cattle_Y_G00048;transcript_id=Cattle_Y_T00081;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	2625989	2626320	.	+	2	ID=Cattle_Y_C00100;Parent=Cattle_Y_T00081;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_50;gene_id=Cattle_Y_G00048;transcript_id=Cattle_Y_T00081;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	2652040	2652614	.	-	.	ID=Cattle_Y_G00049;Dbxref=GeneID:132344660;Name=LOC132344660;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344660;gene_biotype=likely_pseudogene;partial=true;start_range=.,24728184;gene_id=Cattle_Y_G00049;source_id=gene-LOC132344660
haplotype2-0000357	CAT	mRNA	2652040	2652614	.	-	.	ID=Cattle_Y_T00082;Parent=Cattle_Y_G00049;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;Name=XM_059884305.1;gbkey=mRNA;gene=LOC132344660;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00082;gene_id=Cattle_Y_G00049;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884305.1
haplotype2-0000357	CAT	exon	2652040	2652425	.	-	.	ID=Cattle_Y_E00117;Parent=Cattle_Y_T00082;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00082;gene_id=Cattle_Y_G00049;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-2
haplotype2-0000357	CAT	exon	2652489	2652614	.	-	.	ID=Cattle_Y_E00118;Parent=Cattle_Y_T00082;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00082;gene_id=Cattle_Y_G00049;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-1
haplotype2-0000357	CAT	CDS	2652040	2652296	.	-	0	ID=Cattle_Y_C00101;Parent=Cattle_Y_T00082;Dbxref=GeneID:132344660,GenBank:XP_059740288.1;Name=XP_059740288.1;gbkey=CDS;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740288.1_8;start_range=.,24728184;gene_id=Cattle_Y_G00049;transcript_id=Cattle_Y_T00082;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	2700366	2703359	.	-	.	ID=Cattle_Y_G00050;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00050;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	2803355	2803887	.	-	.	ID=Cattle_Y_G00051;Dbxref=GeneID:132344692;Name=LOC132344692;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344692;gene_biotype=protein_coding;partial=true;start_range=.,36344638;gene_id=Cattle_Y_G00051;source_id=gene-LOC132344692
haplotype2-0000357	CAT	mRNA	2803355	2803887	.	-	.	ID=Cattle_Y_T00083;Parent=Cattle_Y_G00051;Dbxref=GeneID:132344692,GenBank:XM_059884334.1;Name=XM_059884334.1;gbkey=mRNA;gene=LOC132344692;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 60%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,36344638;transcript_id=Cattle_Y_T00083;gene_id=Cattle_Y_G00051;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884334.1
haplotype2-0000357	CAT	exon	2803355	2803887	.	-	.	ID=Cattle_Y_E00119;Parent=Cattle_Y_T00083;Dbxref=GeneID:132344692,GenBank:XM_059884334.1;gbkey=mRNA;gene=LOC132344692;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,36344638;transcript_id=Cattle_Y_T00083;gene_id=Cattle_Y_G00051;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884334.1-1
haplotype2-0000357	CAT	CDS	2803355	2803861	.	-	0	ID=Cattle_Y_C00102;Parent=Cattle_Y_T00083;Dbxref=GeneID:132344692,GenBank:XP_059740317.1;Name=XP_059740317.1;gbkey=CDS;gene=LOC132344692;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740317.1_4;start_range=.,36344638;gene_id=Cattle_Y_G00051;transcript_id=Cattle_Y_T00083;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	2892388	2893108	.	-	.	ID=Cattle_Y_G00052;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00052;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	2992832	2995829	.	+	.	ID=Cattle_Y_G00053;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00053;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	3092091	3123085	.	+	.	ID=Cattle_Y_G00054;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00054;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	3092091	3123085	.	+	.	ID=Cattle_Y_T00084;Parent=Cattle_Y_G00054;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00084;gene_id=Cattle_Y_G00054;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	3092091	3092230	.	+	.	ID=Cattle_Y_E00120;Parent=Cattle_Y_T00084;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00084;gene_id=Cattle_Y_G00054;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	3121255	3123085	.	+	.	ID=Cattle_Y_E00121;Parent=Cattle_Y_T00084;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00084;gene_id=Cattle_Y_G00054;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	3121482	3123085	.	+	0	ID=Cattle_Y_C00103;Parent=Cattle_Y_T00084;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_47;gene_id=Cattle_Y_G00054;transcript_id=Cattle_Y_T00084;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	3132195	3134318	.	-	.	ID=Cattle_Y_G00055;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00055;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	3132195	3134318	.	-	.	ID=Cattle_Y_T00085;Parent=Cattle_Y_G00055;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00085;gene_id=Cattle_Y_G00055;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	3132195	3132272	.	-	.	ID=Cattle_Y_E00122;Parent=Cattle_Y_T00085;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00085;gene_id=Cattle_Y_G00055;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	3132389	3132534	.	-	.	ID=Cattle_Y_E00123;Parent=Cattle_Y_T00085;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00085;gene_id=Cattle_Y_G00055;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	3132630	3132743	.	-	.	ID=Cattle_Y_E00124;Parent=Cattle_Y_T00085;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00085;gene_id=Cattle_Y_G00055;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	3132927	3133002	.	-	.	ID=Cattle_Y_E00125;Parent=Cattle_Y_T00085;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00085;gene_id=Cattle_Y_G00055;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	3133778	3134172	.	-	.	ID=Cattle_Y_E00126;Parent=Cattle_Y_T00085;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00085;gene_id=Cattle_Y_G00055;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	3134255	3134318	.	-	.	ID=Cattle_Y_E00127;Parent=Cattle_Y_T00085;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00085;gene_id=Cattle_Y_G00055;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	3132195	3132272	.	-	0	ID=Cattle_Y_C00104;Parent=Cattle_Y_T00085;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_1;gene_id=Cattle_Y_G00055;transcript_id=Cattle_Y_T00085;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	3132389	3132534	.	-	2	ID=Cattle_Y_C00105;Parent=Cattle_Y_T00085;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_1;gene_id=Cattle_Y_G00055;transcript_id=Cattle_Y_T00085;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	3132630	3132743	.	-	2	ID=Cattle_Y_C00106;Parent=Cattle_Y_T00085;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_1;gene_id=Cattle_Y_G00055;transcript_id=Cattle_Y_T00085;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	3132927	3133002	.	-	0	ID=Cattle_Y_C00107;Parent=Cattle_Y_T00085;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_1;gene_id=Cattle_Y_G00055;transcript_id=Cattle_Y_T00085;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	3133778	3134172	.	-	2	ID=Cattle_Y_C00108;Parent=Cattle_Y_T00085;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_1;gene_id=Cattle_Y_G00055;transcript_id=Cattle_Y_T00085;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	3134255	3134318	.	-	0	ID=Cattle_Y_C00109;Parent=Cattle_Y_T00085;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;end_range=36675566,.;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_1;gene_id=Cattle_Y_G00055;transcript_id=Cattle_Y_T00085;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	3162237	3162974	.	+	.	ID=Cattle_Y_G00056;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00056;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	3162237	3162974	.	+	.	ID=Cattle_Y_T00086;Parent=Cattle_Y_G00056;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00056;transcript_id=Cattle_Y_T00086;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	3178308	3180151	.	+	.	ID=Cattle_Y_G00057;Dbxref=GeneID:132344680;Name=LOC132344680;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344680;gene_biotype=protein_coding;gene_id=Cattle_Y_G00057;source_id=gene-LOC132344680
haplotype2-0000357	CAT	mRNA	3178308	3180151	.	+	.	ID=Cattle_Y_T00087;Parent=Cattle_Y_G00057;Dbxref=GeneID:132344680,GenBank:XM_059884320.1;Name=XM_059884320.1;gbkey=mRNA;gene=LOC132344680;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 99%25 coverage of the annotated genomic feature by RNAseq alignments;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00087;gene_id=Cattle_Y_G00057;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884320.1
haplotype2-0000357	CAT	exon	3178308	3180151	.	+	.	ID=Cattle_Y_E00128;Parent=Cattle_Y_T00087;Dbxref=GeneID:132344680,GenBank:XM_059884320.1;gbkey=mRNA;gene=LOC132344680;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00087;gene_id=Cattle_Y_G00057;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884320.1-1
haplotype2-0000357	CAT	CDS	3178375	3180006	.	+	0	ID=Cattle_Y_C00110;Parent=Cattle_Y_T00087;gene_id=Cattle_Y_G00057;transcript_id=Cattle_Y_T00087;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	3199510	3208700	.	+	.	ID=Cattle_Y_G00058;Dbxref=GeneID:132344543;Name=LOC132344543;description=uncharacterized LOC132344543;gbkey=Gene;gene=LOC132344543;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00058;source_id=gene-LOC132344543
haplotype2-0000357	CAT	exon	3199510	3199902	.	+	.	ID=Cattle_Y_T00088;Parent=Cattle_Y_G00058;Dbxref=GeneID:132344543;gbkey=exon;gene=LOC132344543;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00058;transcript_id=Cattle_Y_T00088;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344543-4
haplotype2-0000357	CAT	exon	3207231	3207369	.	+	.	ID=Cattle_Y_T00089;Parent=Cattle_Y_G00058;Dbxref=GeneID:132344543;gbkey=exon;gene=LOC132344543;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00058;transcript_id=Cattle_Y_T00089;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344543-3
haplotype2-0000357	CAT	exon	3208084	3208210	.	+	.	ID=Cattle_Y_T00090;Parent=Cattle_Y_G00058;Dbxref=GeneID:132344543;gbkey=exon;gene=LOC132344543;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00058;transcript_id=Cattle_Y_T00090;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344543-2
haplotype2-0000357	CAT	exon	3208653	3208700	.	+	.	ID=Cattle_Y_T00091;Parent=Cattle_Y_G00058;Dbxref=GeneID:132344543;gbkey=exon;gene=LOC132344543;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00058;transcript_id=Cattle_Y_T00091;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344543
haplotype2-0000357	CAT	gene	3334362	3336506	.	+	.	ID=Cattle_Y_G00059;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00059;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	3334362	3334434	.	+	.	ID=Cattle_Y_T00092;Parent=Cattle_Y_G00059;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00059;transcript_id=Cattle_Y_T00092;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	exon	3334517	3334911	.	+	.	ID=Cattle_Y_T00093;Parent=Cattle_Y_G00059;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00059;transcript_id=Cattle_Y_T00093;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	3335699	3335776	.	+	.	ID=Cattle_Y_T00094;Parent=Cattle_Y_G00059;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00059;transcript_id=Cattle_Y_T00094;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	3335960	3336071	.	+	.	ID=Cattle_Y_T00095;Parent=Cattle_Y_G00059;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00059;transcript_id=Cattle_Y_T00095;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	3336167	3336312	.	+	.	ID=Cattle_Y_T00096;Parent=Cattle_Y_G00059;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00059;transcript_id=Cattle_Y_T00096;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	3336429	3336506	.	+	.	ID=Cattle_Y_T00097;Parent=Cattle_Y_G00059;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00059;transcript_id=Cattle_Y_T00097;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	gene	3367635	3398631	.	+	.	ID=Cattle_Y_G00060;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00060;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	3367635	3398631	.	+	.	ID=Cattle_Y_T00098;Parent=Cattle_Y_G00060;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00098;gene_id=Cattle_Y_G00060;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	3367635	3367774	.	+	.	ID=Cattle_Y_E00129;Parent=Cattle_Y_T00098;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00098;gene_id=Cattle_Y_G00060;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	3396805	3398631	.	+	.	ID=Cattle_Y_E00130;Parent=Cattle_Y_T00098;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00098;gene_id=Cattle_Y_G00060;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	3397032	3398631	.	+	0	ID=Cattle_Y_C00111;Parent=Cattle_Y_T00098;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_42;gene_id=Cattle_Y_G00060;transcript_id=Cattle_Y_T00098;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	3407723	3467003	.	-	.	ID=Cattle_Y_G00061;Dbxref=GeneID:132344710;Name=LOC132344710;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344710;gene_biotype=protein_coding;gene_id=Cattle_Y_G00061;source_id=gene-LOC132344710
haplotype2-0000357	CAT	mRNA	3407723	3467003	.	-	.	ID=Cattle_Y_T00099;Parent=Cattle_Y_G00061;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;Name=XM_059884354.1;gbkey=mRNA;gene=LOC132344710;model_evidence=Supporting evidence includes similarity to: 3 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00099;gene_id=Cattle_Y_G00061;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884354.1
haplotype2-0000357	CAT	exon	3407723	3407800	.	-	.	ID=Cattle_Y_E00131;Parent=Cattle_Y_T00099;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;gbkey=mRNA;gene=LOC132344710;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00099;gene_id=Cattle_Y_G00061;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884354.1-6
haplotype2-0000357	CAT	exon	3407917	3408062	.	-	.	ID=Cattle_Y_E00132;Parent=Cattle_Y_T00099;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;gbkey=mRNA;gene=LOC132344710;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00099;gene_id=Cattle_Y_G00061;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884354.1-6
haplotype2-0000357	CAT	exon	3408158	3408271	.	-	.	ID=Cattle_Y_E00133;Parent=Cattle_Y_T00099;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;gbkey=mRNA;gene=LOC132344710;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00099;gene_id=Cattle_Y_G00061;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884354.1-6
haplotype2-0000357	CAT	exon	3408455	3408530	.	-	.	ID=Cattle_Y_E00134;Parent=Cattle_Y_T00099;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;gbkey=mRNA;gene=LOC132344710;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00099;gene_id=Cattle_Y_G00061;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884354.1-6
haplotype2-0000357	CAT	exon	3409304	3409698	.	-	.	ID=Cattle_Y_E00135;Parent=Cattle_Y_T00099;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;gbkey=mRNA;gene=LOC132344710;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00099;gene_id=Cattle_Y_G00061;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884354.1-6
haplotype2-0000357	CAT	exon	3466880	3467003	.	-	.	ID=Cattle_Y_E00136;Parent=Cattle_Y_T00099;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;gbkey=mRNA;gene=LOC132344710;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00099;gene_id=Cattle_Y_G00061;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884354.1-1
haplotype2-0000357	CAT	CDS	3407723	3407800	.	-	0	ID=Cattle_Y_C00112;Parent=Cattle_Y_T00099;gene_id=Cattle_Y_G00061;transcript_id=Cattle_Y_T00099;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	3407917	3408062	.	-	2	ID=Cattle_Y_C00113;Parent=Cattle_Y_T00099;gene_id=Cattle_Y_G00061;transcript_id=Cattle_Y_T00099;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	3408158	3408271	.	-	2	ID=Cattle_Y_C00114;Parent=Cattle_Y_T00099;gene_id=Cattle_Y_G00061;transcript_id=Cattle_Y_T00099;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	3408455	3408530	.	-	0	ID=Cattle_Y_C00115;Parent=Cattle_Y_T00099;gene_id=Cattle_Y_G00061;transcript_id=Cattle_Y_T00099;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	3409304	3409698	.	-	2	ID=Cattle_Y_C00116;Parent=Cattle_Y_T00099;gene_id=Cattle_Y_G00061;transcript_id=Cattle_Y_T00099;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	3466880	3467003	.	-	0	ID=Cattle_Y_C00117;Parent=Cattle_Y_T00099;gene_id=Cattle_Y_G00061;transcript_id=Cattle_Y_T00099;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	3437752	3438489	.	+	.	ID=Cattle_Y_G00062;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00062;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	3437752	3438489	.	+	.	ID=Cattle_Y_T00100;Parent=Cattle_Y_G00062;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00062;transcript_id=Cattle_Y_T00100;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	3453830	3455673	.	+	.	ID=Cattle_Y_G00063;Dbxref=GeneID:132344680;Name=LOC132344680;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344680;gene_biotype=protein_coding;gene_id=Cattle_Y_G00063;source_id=gene-LOC132344680
haplotype2-0000357	CAT	mRNA	3453830	3455673	.	+	.	ID=Cattle_Y_T00101;Parent=Cattle_Y_G00063;Dbxref=GeneID:132344680,GenBank:XM_059884320.1;Name=XM_059884320.1;gbkey=mRNA;gene=LOC132344680;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 99%25 coverage of the annotated genomic feature by RNAseq alignments;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00101;gene_id=Cattle_Y_G00063;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884320.1
haplotype2-0000357	CAT	exon	3453830	3455673	.	+	.	ID=Cattle_Y_E00137;Parent=Cattle_Y_T00101;Dbxref=GeneID:132344680,GenBank:XM_059884320.1;gbkey=mRNA;gene=LOC132344680;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00101;gene_id=Cattle_Y_G00063;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884320.1-1
haplotype2-0000357	CAT	CDS	3453897	3455528	.	+	0	ID=Cattle_Y_C00118;Parent=Cattle_Y_T00101;gene_id=Cattle_Y_G00063;transcript_id=Cattle_Y_T00101;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	3475023	3484213	.	+	.	ID=Cattle_Y_G00064;Dbxref=GeneID:132344543;Name=LOC132344543;description=uncharacterized LOC132344543;gbkey=Gene;gene=LOC132344543;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00064;source_id=gene-LOC132344543
haplotype2-0000357	CAT	exon	3475023	3475415	.	+	.	ID=Cattle_Y_T00102;Parent=Cattle_Y_G00064;Dbxref=GeneID:132344543;gbkey=exon;gene=LOC132344543;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00064;transcript_id=Cattle_Y_T00102;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344543-4
haplotype2-0000357	CAT	exon	3482744	3482882	.	+	.	ID=Cattle_Y_T00103;Parent=Cattle_Y_G00064;Dbxref=GeneID:132344543;gbkey=exon;gene=LOC132344543;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00064;transcript_id=Cattle_Y_T00103;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344543-3
haplotype2-0000357	CAT	exon	3483597	3483723	.	+	.	ID=Cattle_Y_T00104;Parent=Cattle_Y_G00064;Dbxref=GeneID:132344543;gbkey=exon;gene=LOC132344543;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00064;transcript_id=Cattle_Y_T00104;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344543-2
haplotype2-0000357	CAT	exon	3484166	3484213	.	+	.	ID=Cattle_Y_T00105;Parent=Cattle_Y_G00064;Dbxref=GeneID:132344543;gbkey=exon;gene=LOC132344543;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00064;transcript_id=Cattle_Y_T00105;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344543
haplotype2-0000357	CAT	gene	3609854	3611998	.	+	.	ID=Cattle_Y_G00065;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00065;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	3609854	3609926	.	+	.	ID=Cattle_Y_T00106;Parent=Cattle_Y_G00065;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00065;transcript_id=Cattle_Y_T00106;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	exon	3610009	3610403	.	+	.	ID=Cattle_Y_T00107;Parent=Cattle_Y_G00065;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00065;transcript_id=Cattle_Y_T00107;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	3611191	3611268	.	+	.	ID=Cattle_Y_T00108;Parent=Cattle_Y_G00065;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00065;transcript_id=Cattle_Y_T00108;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	3611452	3611563	.	+	.	ID=Cattle_Y_T00109;Parent=Cattle_Y_G00065;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00065;transcript_id=Cattle_Y_T00109;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	3611659	3611804	.	+	.	ID=Cattle_Y_T00110;Parent=Cattle_Y_G00065;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00065;transcript_id=Cattle_Y_T00110;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	3611921	3611998	.	+	.	ID=Cattle_Y_T00111;Parent=Cattle_Y_G00065;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00065;transcript_id=Cattle_Y_T00111;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	gene	3644819	3675822	.	+	.	ID=Cattle_Y_G00066;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00066;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	3644819	3675822	.	+	.	ID=Cattle_Y_T00112;Parent=Cattle_Y_G00066;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00112;gene_id=Cattle_Y_G00066;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	3644819	3644958	.	+	.	ID=Cattle_Y_E00138;Parent=Cattle_Y_T00112;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00112;gene_id=Cattle_Y_G00066;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	3673996	3675822	.	+	.	ID=Cattle_Y_E00139;Parent=Cattle_Y_T00112;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00112;gene_id=Cattle_Y_G00066;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	3674223	3675822	.	+	0	ID=Cattle_Y_C00119;Parent=Cattle_Y_T00112;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_44;gene_id=Cattle_Y_G00066;transcript_id=Cattle_Y_T00112;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	3684912	3687033	.	-	.	ID=Cattle_Y_G00067;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00067;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	3684912	3687033	.	-	.	ID=Cattle_Y_T00113;Parent=Cattle_Y_G00067;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00113;gene_id=Cattle_Y_G00067;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	3684912	3684989	.	-	.	ID=Cattle_Y_E00140;Parent=Cattle_Y_T00113;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00113;gene_id=Cattle_Y_G00067;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	3685106	3685251	.	-	.	ID=Cattle_Y_E00141;Parent=Cattle_Y_T00113;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00113;gene_id=Cattle_Y_G00067;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	3685347	3685460	.	-	.	ID=Cattle_Y_E00142;Parent=Cattle_Y_T00113;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00113;gene_id=Cattle_Y_G00067;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	3685644	3685719	.	-	.	ID=Cattle_Y_E00143;Parent=Cattle_Y_T00113;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00113;gene_id=Cattle_Y_G00067;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	3686493	3686887	.	-	.	ID=Cattle_Y_E00144;Parent=Cattle_Y_T00113;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00113;gene_id=Cattle_Y_G00067;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	3686970	3687033	.	-	.	ID=Cattle_Y_E00145;Parent=Cattle_Y_T00113;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00113;gene_id=Cattle_Y_G00067;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	3684912	3684989	.	-	0	ID=Cattle_Y_C00120;Parent=Cattle_Y_T00113;gene_id=Cattle_Y_G00067;transcript_id=Cattle_Y_T00113;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	3685106	3685251	.	-	2	ID=Cattle_Y_C00121;Parent=Cattle_Y_T00113;gene_id=Cattle_Y_G00067;transcript_id=Cattle_Y_T00113;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	3685347	3685460	.	-	2	ID=Cattle_Y_C00122;Parent=Cattle_Y_T00113;gene_id=Cattle_Y_G00067;transcript_id=Cattle_Y_T00113;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	3685644	3685719	.	-	0	ID=Cattle_Y_C00123;Parent=Cattle_Y_T00113;gene_id=Cattle_Y_G00067;transcript_id=Cattle_Y_T00113;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	3686493	3686887	.	-	2	ID=Cattle_Y_C00124;Parent=Cattle_Y_T00113;gene_id=Cattle_Y_G00067;transcript_id=Cattle_Y_T00113;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	3686970	3687033	.	-	0	ID=Cattle_Y_C00125;Parent=Cattle_Y_T00113;gene_id=Cattle_Y_G00067;transcript_id=Cattle_Y_T00113;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	3714938	3715675	.	+	.	ID=Cattle_Y_G00068;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00068;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	3714938	3715675	.	+	.	ID=Cattle_Y_T00114;Parent=Cattle_Y_G00068;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00068;transcript_id=Cattle_Y_T00114;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	3721731	3732815	.	+	.	ID=Cattle_Y_G00069;Dbxref=GeneID:132344678;Name=LOC132344678;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344678;gene_biotype=protein_coding;gene_id=Cattle_Y_G00069;source_id=gene-LOC132344678
haplotype2-0000357	CAT	mRNA	3721731	3732815	.	+	.	ID=Cattle_Y_T00115;Parent=Cattle_Y_G00069;Dbxref=GeneID:132344678,GenBank:XM_059884318.1;Name=XM_059884318.1;gbkey=mRNA;gene=LOC132344678;model_evidence=Supporting evidence includes similarity to: 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00115;gene_id=Cattle_Y_G00069;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884318.1
haplotype2-0000357	CAT	exon	3721731	3721855	.	+	.	ID=Cattle_Y_E00146;Parent=Cattle_Y_T00115;Dbxref=GeneID:132344678,GenBank:XM_059884318.1;gbkey=mRNA;gene=LOC132344678;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00115;gene_id=Cattle_Y_G00069;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884318.1-1
haplotype2-0000357	CAT	exon	3731008	3732815	.	+	.	ID=Cattle_Y_E00147;Parent=Cattle_Y_T00115;Dbxref=GeneID:132344678,GenBank:XM_059884318.1;gbkey=mRNA;gene=LOC132344678;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00115;gene_id=Cattle_Y_G00069;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884318.1-2
haplotype2-0000357	CAT	CDS	3731079	3732710	.	+	0	ID=Cattle_Y_C00126;Parent=Cattle_Y_T00115;gene_id=Cattle_Y_G00069;transcript_id=Cattle_Y_T00115;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	3737135	3737662	.	+	.	ID=Cattle_Y_G00070;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00070;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	3737135	3737662	.	+	.	ID=Cattle_Y_T00116;Parent=Cattle_Y_G00070;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00116;gene_id=Cattle_Y_G00070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	3737135	3737258	.	+	.	ID=Cattle_Y_E00148;Parent=Cattle_Y_T00116;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00116;gene_id=Cattle_Y_G00070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	3737331	3737662	.	+	.	ID=Cattle_Y_E00149;Parent=Cattle_Y_T00116;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00116;gene_id=Cattle_Y_G00070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	3737135	3737258	.	+	0	ID=Cattle_Y_C00127;Parent=Cattle_Y_T00116;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_1;gene_id=Cattle_Y_G00070;transcript_id=Cattle_Y_T00116;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	3737331	3737662	.	+	2	ID=Cattle_Y_C00128;Parent=Cattle_Y_T00116;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_1;gene_id=Cattle_Y_G00070;transcript_id=Cattle_Y_T00116;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	3763426	3763967	.	-	.	ID=Cattle_Y_G00071;Dbxref=GeneID:132344657;Name=LOC132344657;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344657;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00071;source_id=gene-LOC132344657
haplotype2-0000357	CAT	mRNA	3763426	3763967	.	-	.	ID=Cattle_Y_T00117;Parent=Cattle_Y_G00071;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;Name=XM_059884302.1;gbkey=mRNA;gene=LOC132344657;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00117;gene_id=Cattle_Y_G00071;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884302.1
haplotype2-0000357	CAT	exon	3763426	3763778	.	-	.	ID=Cattle_Y_E00150;Parent=Cattle_Y_T00117;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00117;gene_id=Cattle_Y_G00071;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-2
haplotype2-0000357	CAT	exon	3763842	3763967	.	-	.	ID=Cattle_Y_E00151;Parent=Cattle_Y_T00117;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00117;gene_id=Cattle_Y_G00071;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-1
haplotype2-0000357	CAT	CDS	3763426	3763649	.	-	0	ID=Cattle_Y_C00129;Parent=Cattle_Y_T00117;Dbxref=GeneID:132344657,GenBank:XP_059740285.1;Name=XP_059740285.1;gbkey=CDS;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740285.1_13;gene_id=Cattle_Y_G00071;transcript_id=Cattle_Y_T00117;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	3838639	3840476	.	+	.	ID=Cattle_Y_G00072;Dbxref=GeneID:132344719;Name=LOC132344719;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344719;gene_biotype=protein_coding;gene_id=Cattle_Y_G00072;source_id=gene-LOC132344719
haplotype2-0000357	CAT	mRNA	3838639	3840476	.	+	.	ID=Cattle_Y_T00118;Parent=Cattle_Y_G00072;Dbxref=GeneID:132344719,GenBank:XM_059884364.1;Name=XM_059884364.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344719;model_evidence=Supporting evidence includes similarity to: 4 Proteins%2C and 97%25 coverage of the annotated genomic feature by RNAseq alignments;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00118;gene_id=Cattle_Y_G00072;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884364.1
haplotype2-0000357	CAT	exon	3838639	3839235	.	+	.	ID=Cattle_Y_E00152;Parent=Cattle_Y_T00118;Dbxref=GeneID:132344719,GenBank:XM_059884364.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344719;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00118;gene_id=Cattle_Y_G00072;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884364.1-1
haplotype2-0000357	CAT	exon	3839666	3840476	.	+	.	ID=Cattle_Y_E00153;Parent=Cattle_Y_T00118;Dbxref=GeneID:132344719,GenBank:XM_059884364.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344719;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00118;gene_id=Cattle_Y_G00072;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884364.1-2
haplotype2-0000357	CAT	CDS	3838726	3839235	.	+	0	ID=Cattle_Y_C00130;Parent=Cattle_Y_T00118;gene_id=Cattle_Y_G00072;transcript_id=Cattle_Y_T00118;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	3839666	3840400	.	+	0	ID=Cattle_Y_C00131;Parent=Cattle_Y_T00118;gene_id=Cattle_Y_G00072;transcript_id=Cattle_Y_T00118;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	4004967	4036004	.	+	.	ID=Cattle_Y_G00073;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00073;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	4004967	4036004	.	+	.	ID=Cattle_Y_T00119;Parent=Cattle_Y_G00073;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00119;gene_id=Cattle_Y_G00073;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	4004967	4005106	.	+	.	ID=Cattle_Y_E00154;Parent=Cattle_Y_T00119;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00119;gene_id=Cattle_Y_G00073;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	4034171	4036004	.	+	.	ID=Cattle_Y_E00155;Parent=Cattle_Y_T00119;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00119;gene_id=Cattle_Y_G00073;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	4034397	4036004	.	+	0	ID=Cattle_Y_C00132;Parent=Cattle_Y_T00119;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_39;gene_id=Cattle_Y_G00073;transcript_id=Cattle_Y_T00119;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	4045193	4047092	.	-	.	ID=Cattle_Y_G00074;Dbxref=GeneID:132344659;Name=LOC132344659;description=testis-specific Y-encoded protein 1-like;end_range=24663580,.;gbkey=Gene;gene=LOC132344659;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00074;source_id=gene-LOC132344659
haplotype2-0000357	CAT	mRNA	4045193	4047092	.	-	.	ID=Cattle_Y_T00120;Parent=Cattle_Y_G00074;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;Name=XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00120;gene_id=Cattle_Y_G00074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884304.1
haplotype2-0000357	CAT	exon	4045193	4045270	.	-	.	ID=Cattle_Y_E00156;Parent=Cattle_Y_T00120;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00120;gene_id=Cattle_Y_G00074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-5
haplotype2-0000357	CAT	exon	4045387	4045532	.	-	.	ID=Cattle_Y_E00157;Parent=Cattle_Y_T00120;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00120;gene_id=Cattle_Y_G00074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-4
haplotype2-0000357	CAT	exon	4045628	4045741	.	-	.	ID=Cattle_Y_E00158;Parent=Cattle_Y_T00120;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00120;gene_id=Cattle_Y_G00074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-3
haplotype2-0000357	CAT	exon	4045925	4046000	.	-	.	ID=Cattle_Y_E00159;Parent=Cattle_Y_T00120;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00120;gene_id=Cattle_Y_G00074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-2
haplotype2-0000357	CAT	exon	4046772	4047092	.	-	.	ID=Cattle_Y_E00160;Parent=Cattle_Y_T00120;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00120;gene_id=Cattle_Y_G00074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-1
haplotype2-0000357	CAT	CDS	4045193	4045270	.	-	0	ID=Cattle_Y_C00133;Parent=Cattle_Y_T00120;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_11;gene_id=Cattle_Y_G00074;transcript_id=Cattle_Y_T00120;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	4045387	4045532	.	-	2	ID=Cattle_Y_C00134;Parent=Cattle_Y_T00120;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_11;gene_id=Cattle_Y_G00074;transcript_id=Cattle_Y_T00120;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	4045628	4045741	.	-	2	ID=Cattle_Y_C00135;Parent=Cattle_Y_T00120;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_11;gene_id=Cattle_Y_G00074;transcript_id=Cattle_Y_T00120;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	4045925	4046000	.	-	0	ID=Cattle_Y_C00136;Parent=Cattle_Y_T00120;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_11;gene_id=Cattle_Y_G00074;transcript_id=Cattle_Y_T00120;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	4046772	4047092	.	-	0	ID=Cattle_Y_C00137;Parent=Cattle_Y_T00120;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;end_range=24663580,.;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_11;gene_id=Cattle_Y_G00074;transcript_id=Cattle_Y_T00120;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	4084506	4095456	.	+	.	ID=Cattle_Y_G00075;Dbxref=GeneID:132344681;Name=LOC132344681;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344681;gene_biotype=protein_coding;gene_id=Cattle_Y_G00075;source_id=gene-LOC132344681
haplotype2-0000357	CAT	mRNA	4084506	4095456	.	+	.	ID=Cattle_Y_T00121;Parent=Cattle_Y_G00075;Dbxref=GeneID:132344681,GenBank:XM_059884321.1;Name=XM_059884321.1;gbkey=mRNA;gene=LOC132344681;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00121;gene_id=Cattle_Y_G00075;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884321.1
haplotype2-0000357	CAT	exon	4084506	4084631	.	+	.	ID=Cattle_Y_E00161;Parent=Cattle_Y_T00121;Dbxref=GeneID:132344681,GenBank:XM_059884321.1;gbkey=mRNA;gene=LOC132344681;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00121;gene_id=Cattle_Y_G00075;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884321.1-1
haplotype2-0000357	CAT	exon	4093649	4095456	.	+	.	ID=Cattle_Y_E00162;Parent=Cattle_Y_T00121;Dbxref=GeneID:132344681,GenBank:XM_059884321.1;gbkey=mRNA;gene=LOC132344681;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00121;gene_id=Cattle_Y_G00075;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884321.1-2
haplotype2-0000357	CAT	CDS	4093720	4095351	.	+	0	ID=Cattle_Y_C00138;Parent=Cattle_Y_T00121;Dbxref=GeneID:132344681,GenBank:XP_059740304.1;Name=XP_059740304.1;gbkey=CDS;gene=LOC132344681;product=zinc finger protein 280B-like;protein_id=XP_059740304.1_4;gene_id=Cattle_Y_G00075;transcript_id=Cattle_Y_T00121;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	4099750	4100277	.	+	.	ID=Cattle_Y_G00076;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00076;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	4099750	4100277	.	+	.	ID=Cattle_Y_T00122;Parent=Cattle_Y_G00076;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00122;gene_id=Cattle_Y_G00076;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	4099750	4099873	.	+	.	ID=Cattle_Y_E00163;Parent=Cattle_Y_T00122;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00122;gene_id=Cattle_Y_G00076;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	4099946	4100277	.	+	.	ID=Cattle_Y_E00164;Parent=Cattle_Y_T00122;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00122;gene_id=Cattle_Y_G00076;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	4099750	4099873	.	+	0	ID=Cattle_Y_C00139;Parent=Cattle_Y_T00122;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_6;gene_id=Cattle_Y_G00076;transcript_id=Cattle_Y_T00122;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	4099946	4100277	.	+	2	ID=Cattle_Y_C00140;Parent=Cattle_Y_T00122;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_6;gene_id=Cattle_Y_G00076;transcript_id=Cattle_Y_T00122;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	4126051	4126592	.	-	.	ID=Cattle_Y_G00077;Dbxref=GeneID:132344657;Name=LOC132344657;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344657;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00077;source_id=gene-LOC132344657
haplotype2-0000357	CAT	mRNA	4126051	4126592	.	-	.	ID=Cattle_Y_T00123;Parent=Cattle_Y_G00077;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;Name=XM_059884302.1;gbkey=mRNA;gene=LOC132344657;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00123;gene_id=Cattle_Y_G00077;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884302.1
haplotype2-0000357	CAT	exon	4126051	4126403	.	-	.	ID=Cattle_Y_E00165;Parent=Cattle_Y_T00123;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00123;gene_id=Cattle_Y_G00077;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-2
haplotype2-0000357	CAT	exon	4126467	4126592	.	-	.	ID=Cattle_Y_E00166;Parent=Cattle_Y_T00123;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00123;gene_id=Cattle_Y_G00077;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-1
haplotype2-0000357	CAT	CDS	4126051	4126274	.	-	0	ID=Cattle_Y_C00141;Parent=Cattle_Y_T00123;Dbxref=GeneID:132344657,GenBank:XP_059740285.1;Name=XP_059740285.1;gbkey=CDS;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740285.1_1;gene_id=Cattle_Y_G00077;transcript_id=Cattle_Y_T00123;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	4193847	4194574	.	-	.	ID=Cattle_Y_G00078;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00078;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	4201226	4202703	.	+	.	ID=Cattle_Y_G00079;Dbxref=GeneID:132344676;Name=LOC132344676;description=heat shock transcription factor%2C Y-linked-like;end_range=29677287,.;gbkey=Gene;gene=LOC132344676;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00079;source_id=gene-LOC132344676
haplotype2-0000357	CAT	mRNA	4201226	4202703	.	+	.	ID=Cattle_Y_T00124;Parent=Cattle_Y_G00079;Dbxref=GeneID:132344676,GenBank:XM_059884316.1;Name=XM_059884316.1;end_range=29677287,.;gbkey=mRNA;gene=LOC132344676;model_evidence=Supporting evidence includes similarity to: 4 Proteins%2C and 74%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00124;gene_id=Cattle_Y_G00079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884316.1
haplotype2-0000357	CAT	exon	4201226	4201745	.	+	.	ID=Cattle_Y_E00167;Parent=Cattle_Y_T00124;Dbxref=GeneID:132344676,GenBank:XM_059884316.1;gbkey=mRNA;gene=LOC132344676;partial=true;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00124;gene_id=Cattle_Y_G00079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884316.1-1
haplotype2-0000357	CAT	exon	4202176	4202703	.	+	.	ID=Cattle_Y_E00168;Parent=Cattle_Y_T00124;Dbxref=GeneID:132344676,GenBank:XM_059884316.1;end_range=29677287,.;gbkey=mRNA;gene=LOC132344676;partial=true;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00124;gene_id=Cattle_Y_G00079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884316.1-2
haplotype2-0000357	CAT	CDS	4201236	4201745	.	+	0	ID=Cattle_Y_C00142;Parent=Cattle_Y_T00124;gene_id=Cattle_Y_G00079;transcript_id=Cattle_Y_T00124;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	4202176	4202703	.	+	0	ID=Cattle_Y_C00143;Parent=Cattle_Y_T00124;gene_id=Cattle_Y_G00079;transcript_id=Cattle_Y_T00124;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	4407455	4409615	.	-	.	ID=Cattle_Y_G00080;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00080;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	4407455	4407532	.	-	.	ID=Cattle_Y_T00125;Parent=Cattle_Y_G00080;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00080;transcript_id=Cattle_Y_T00125;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	exon	4407649	4407794	.	-	.	ID=Cattle_Y_T00126;Parent=Cattle_Y_G00080;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00080;transcript_id=Cattle_Y_T00126;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	4407890	4408001	.	-	.	ID=Cattle_Y_T00127;Parent=Cattle_Y_G00080;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00080;transcript_id=Cattle_Y_T00127;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	4408185	4408262	.	-	.	ID=Cattle_Y_T00128;Parent=Cattle_Y_G00080;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00080;transcript_id=Cattle_Y_T00128;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	4409066	4409460	.	-	.	ID=Cattle_Y_T00129;Parent=Cattle_Y_G00080;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00080;transcript_id=Cattle_Y_T00129;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	4409543	4409615	.	-	.	ID=Cattle_Y_T00130;Parent=Cattle_Y_G00080;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00080;transcript_id=Cattle_Y_T00130;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	gene	4500670	4501233	.	-	.	ID=Cattle_Y_G00081;Dbxref=GeneID:132344690;Name=LOC132344690;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344690;gene_biotype=protein_coding;partial=true;start_range=.,34773871;gene_id=Cattle_Y_G00081;source_id=gene-LOC132344690
haplotype2-0000357	CAT	mRNA	4500670	4501233	.	-	.	ID=Cattle_Y_T00131;Parent=Cattle_Y_G00081;Dbxref=GeneID:132344690,GenBank:XM_059884331.1;Name=XM_059884331.1;gbkey=mRNA;gene=LOC132344690;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 34%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,34773871;transcript_id=Cattle_Y_T00131;gene_id=Cattle_Y_G00081;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884331.1
haplotype2-0000357	CAT	exon	4500670	4501233	.	-	.	ID=Cattle_Y_E00169;Parent=Cattle_Y_T00131;Dbxref=GeneID:132344690,GenBank:XM_059884331.1;gbkey=mRNA;gene=LOC132344690;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,34773871;transcript_id=Cattle_Y_T00131;gene_id=Cattle_Y_G00081;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884331.1-1
haplotype2-0000357	CAT	CDS	4500670	4501233	.	-	0	ID=Cattle_Y_C00144;Parent=Cattle_Y_T00131;Dbxref=GeneID:132344690,GenBank:XP_059740314.1;Name=XP_059740314.1;gbkey=CDS;gene=LOC132344690;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740314.1_6;start_range=.,34773871;gene_id=Cattle_Y_G00081;transcript_id=Cattle_Y_T00131;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	4577368	4577942	.	+	.	ID=Cattle_Y_G00082;Dbxref=GeneID:132344660;Name=LOC132344660;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344660;gene_biotype=likely_pseudogene;partial=true;start_range=.,24728184;gene_id=Cattle_Y_G00082;source_id=gene-LOC132344660
haplotype2-0000357	CAT	mRNA	4577368	4577942	.	+	.	ID=Cattle_Y_T00132;Parent=Cattle_Y_G00082;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;Name=XM_059884305.1;gbkey=mRNA;gene=LOC132344660;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00132;gene_id=Cattle_Y_G00082;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884305.1
haplotype2-0000357	CAT	exon	4577368	4577493	.	+	.	ID=Cattle_Y_E00170;Parent=Cattle_Y_T00132;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00132;gene_id=Cattle_Y_G00082;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-1
haplotype2-0000357	CAT	exon	4577557	4577942	.	+	.	ID=Cattle_Y_E00171;Parent=Cattle_Y_T00132;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00132;gene_id=Cattle_Y_G00082;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-2
haplotype2-0000357	CAT	CDS	4577686	4577942	.	+	0	ID=Cattle_Y_C00145;Parent=Cattle_Y_T00132;Dbxref=GeneID:132344660,GenBank:XP_059740288.1;Name=XP_059740288.1;gbkey=CDS;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740288.1_5;start_range=.,24728184;gene_id=Cattle_Y_G00082;transcript_id=Cattle_Y_T00132;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	4604216	4604743	.	-	.	ID=Cattle_Y_G00083;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00083;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	4604216	4604743	.	-	.	ID=Cattle_Y_T00133;Parent=Cattle_Y_G00083;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00133;gene_id=Cattle_Y_G00083;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	4604216	4604547	.	-	.	ID=Cattle_Y_E00172;Parent=Cattle_Y_T00133;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00133;gene_id=Cattle_Y_G00083;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	exon	4604620	4604743	.	-	.	ID=Cattle_Y_E00173;Parent=Cattle_Y_T00133;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00133;gene_id=Cattle_Y_G00083;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	CDS	4604216	4604547	.	-	2	ID=Cattle_Y_C00146;Parent=Cattle_Y_T00133;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_7;gene_id=Cattle_Y_G00083;transcript_id=Cattle_Y_T00133;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	4604620	4604743	.	-	0	ID=Cattle_Y_C00147;Parent=Cattle_Y_T00133;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_7;gene_id=Cattle_Y_G00083;transcript_id=Cattle_Y_T00133;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	4609070	4620115	.	-	.	ID=Cattle_Y_G00084;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00084;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	4609070	4620115	.	-	.	ID=Cattle_Y_T00134;Parent=Cattle_Y_G00084;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00134;gene_id=Cattle_Y_G00084;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	4609070	4610877	.	-	.	ID=Cattle_Y_E00174;Parent=Cattle_Y_T00134;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00134;gene_id=Cattle_Y_G00084;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	exon	4619988	4620115	.	-	.	ID=Cattle_Y_E00175;Parent=Cattle_Y_T00134;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00134;gene_id=Cattle_Y_G00084;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	CDS	4609175	4610806	.	-	0	ID=Cattle_Y_C00148;Parent=Cattle_Y_T00134;gene_id=Cattle_Y_G00084;transcript_id=Cattle_Y_T00134;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	4626205	4626942	.	-	.	ID=Cattle_Y_G00085;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00085;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	4626205	4626942	.	-	.	ID=Cattle_Y_T00135;Parent=Cattle_Y_G00085;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00085;transcript_id=Cattle_Y_T00135;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	4657487	4659460	.	+	.	ID=Cattle_Y_G00086;Dbxref=GeneID:132344672;Name=LOC132344672;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344672;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00086;source_id=gene-LOC132344672
haplotype2-0000357	CAT	exon	4657487	4657869	.	+	.	ID=Cattle_Y_T00136;Parent=Cattle_Y_G00086;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00086;transcript_id=Cattle_Y_T00136;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-5
haplotype2-0000357	CAT	exon	4658653	4658728	.	+	.	ID=Cattle_Y_T00137;Parent=Cattle_Y_G00086;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00086;transcript_id=Cattle_Y_T00137;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-4
haplotype2-0000357	CAT	exon	4658912	4659025	.	+	.	ID=Cattle_Y_T00138;Parent=Cattle_Y_G00086;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00086;transcript_id=Cattle_Y_T00138;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-3
haplotype2-0000357	CAT	exon	4659121	4659266	.	+	.	ID=Cattle_Y_T00139;Parent=Cattle_Y_G00086;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00086;transcript_id=Cattle_Y_T00139;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-2
haplotype2-0000357	CAT	exon	4659383	4659460	.	+	.	ID=Cattle_Y_T00140;Parent=Cattle_Y_G00086;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00086;transcript_id=Cattle_Y_T00140;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672
haplotype2-0000357	CAT	gene	4668565	4699618	.	-	.	ID=Cattle_Y_G00087;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00087;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	4668565	4699618	.	-	.	ID=Cattle_Y_T00141;Parent=Cattle_Y_G00087;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00141;gene_id=Cattle_Y_G00087;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	4668565	4670393	.	-	.	ID=Cattle_Y_E00176;Parent=Cattle_Y_T00141;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00141;gene_id=Cattle_Y_G00087;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	exon	4699479	4699618	.	-	.	ID=Cattle_Y_E00177;Parent=Cattle_Y_T00141;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00141;gene_id=Cattle_Y_G00087;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	CDS	4668565	4670167	.	-	0	ID=Cattle_Y_C00149;Parent=Cattle_Y_T00141;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_2;gene_id=Cattle_Y_G00087;transcript_id=Cattle_Y_T00141;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	4801608	4803579	.	-	.	ID=Cattle_Y_G00088;Dbxref=GeneID:132344672;Name=LOC132344672;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344672;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00088;source_id=gene-LOC132344672
haplotype2-0000357	CAT	exon	4801608	4801685	.	-	.	ID=Cattle_Y_T00142;Parent=Cattle_Y_G00088;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00088;transcript_id=Cattle_Y_T00142;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672
haplotype2-0000357	CAT	exon	4801802	4801947	.	-	.	ID=Cattle_Y_T00143;Parent=Cattle_Y_G00088;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00088;transcript_id=Cattle_Y_T00143;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-2
haplotype2-0000357	CAT	exon	4802043	4802156	.	-	.	ID=Cattle_Y_T00144;Parent=Cattle_Y_G00088;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00088;transcript_id=Cattle_Y_T00144;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-3
haplotype2-0000357	CAT	exon	4802340	4802415	.	-	.	ID=Cattle_Y_T00145;Parent=Cattle_Y_G00088;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00088;transcript_id=Cattle_Y_T00145;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-4
haplotype2-0000357	CAT	exon	4803197	4803579	.	-	.	ID=Cattle_Y_T00146;Parent=Cattle_Y_G00088;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00088;transcript_id=Cattle_Y_T00146;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-5
haplotype2-0000357	CAT	gene	4834120	4834857	.	+	.	ID=Cattle_Y_G00089;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00089;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	4834120	4834857	.	+	.	ID=Cattle_Y_T00147;Parent=Cattle_Y_G00089;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00089;transcript_id=Cattle_Y_T00147;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	4840943	4851970	.	+	.	ID=Cattle_Y_G00090;Dbxref=GeneID:132344711;Name=LOC132344711;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344711;gene_biotype=protein_coding;gene_id=Cattle_Y_G00090;source_id=gene-LOC132344711
haplotype2-0000357	CAT	mRNA	4840943	4851970	.	+	.	ID=Cattle_Y_T00148;Parent=Cattle_Y_G00090;Dbxref=GeneID:132344711,GenBank:XM_059884355.1;Name=XM_059884355.1;gbkey=mRNA;gene=LOC132344711;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00148;gene_id=Cattle_Y_G00090;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884355.1
haplotype2-0000357	CAT	exon	4840943	4841093	.	+	.	ID=Cattle_Y_E00178;Parent=Cattle_Y_T00148;Dbxref=GeneID:132344711,GenBank:XM_059884355.1;gbkey=mRNA;gene=LOC132344711;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00148;gene_id=Cattle_Y_G00090;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884355.1-1
haplotype2-0000357	CAT	exon	4850172	4851970	.	+	.	ID=Cattle_Y_E00179;Parent=Cattle_Y_T00148;Dbxref=GeneID:132344711,GenBank:XM_059884355.1;gbkey=mRNA;gene=LOC132344711;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00148;gene_id=Cattle_Y_G00090;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884355.1-2
haplotype2-0000357	CAT	CDS	4850243	4851874	.	+	0	ID=Cattle_Y_C00150;Parent=Cattle_Y_T00148;gene_id=Cattle_Y_G00090;transcript_id=Cattle_Y_T00148;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	4871502	4882085	.	+	.	ID=Cattle_Y_G00091;Dbxref=GeneID:132344542;Name=LOC132344542;description=uncharacterized LOC132344542;gbkey=Gene;gene=LOC132344542;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00091;source_id=gene-LOC132344542
haplotype2-0000357	CAT	exon	4871502	4871894	.	+	.	ID=Cattle_Y_T00149;Parent=Cattle_Y_G00091;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00091;transcript_id=Cattle_Y_T00149;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542
haplotype2-0000357	CAT	exon	4879263	4879401	.	+	.	ID=Cattle_Y_T00150;Parent=Cattle_Y_G00091;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00091;transcript_id=Cattle_Y_T00150;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542-2
haplotype2-0000357	CAT	exon	4880112	4880227	.	+	.	ID=Cattle_Y_T00151;Parent=Cattle_Y_G00091;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00091;transcript_id=Cattle_Y_T00151;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542-3
haplotype2-0000357	CAT	exon	4881946	4882085	.	+	.	ID=Cattle_Y_T00152;Parent=Cattle_Y_G00091;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00091;transcript_id=Cattle_Y_T00152;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542-4
haplotype2-0000357	CAT	gene	5006801	5008947	.	+	.	ID=Cattle_Y_G00092;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00092;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	5006801	5006873	.	+	.	ID=Cattle_Y_T00153;Parent=Cattle_Y_G00092;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00092;transcript_id=Cattle_Y_T00153;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	exon	5006956	5007350	.	+	.	ID=Cattle_Y_T00154;Parent=Cattle_Y_G00092;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00092;transcript_id=Cattle_Y_T00154;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	5008140	5008217	.	+	.	ID=Cattle_Y_T00155;Parent=Cattle_Y_G00092;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00092;transcript_id=Cattle_Y_T00155;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	5008401	5008512	.	+	.	ID=Cattle_Y_T00156;Parent=Cattle_Y_G00092;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00092;transcript_id=Cattle_Y_T00156;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	5008608	5008753	.	+	.	ID=Cattle_Y_T00157;Parent=Cattle_Y_G00092;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00092;transcript_id=Cattle_Y_T00157;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	5008870	5008947	.	+	.	ID=Cattle_Y_T00158;Parent=Cattle_Y_G00092;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00092;transcript_id=Cattle_Y_T00158;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	gene	5080686	5082807	.	-	.	ID=Cattle_Y_G00093;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00093;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	5080686	5082807	.	-	.	ID=Cattle_Y_T00159;Parent=Cattle_Y_G00093;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00159;gene_id=Cattle_Y_G00093;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	5080686	5080763	.	-	.	ID=Cattle_Y_E00180;Parent=Cattle_Y_T00159;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00159;gene_id=Cattle_Y_G00093;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	5080880	5081025	.	-	.	ID=Cattle_Y_E00181;Parent=Cattle_Y_T00159;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00159;gene_id=Cattle_Y_G00093;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	5081121	5081234	.	-	.	ID=Cattle_Y_E00182;Parent=Cattle_Y_T00159;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00159;gene_id=Cattle_Y_G00093;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	5081418	5081493	.	-	.	ID=Cattle_Y_E00183;Parent=Cattle_Y_T00159;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00159;gene_id=Cattle_Y_G00093;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	5082267	5082661	.	-	.	ID=Cattle_Y_E00184;Parent=Cattle_Y_T00159;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00159;gene_id=Cattle_Y_G00093;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	5082744	5082807	.	-	.	ID=Cattle_Y_E00185;Parent=Cattle_Y_T00159;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00159;gene_id=Cattle_Y_G00093;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	5080686	5080763	.	-	0	ID=Cattle_Y_C00151;Parent=Cattle_Y_T00159;gene_id=Cattle_Y_G00093;transcript_id=Cattle_Y_T00159;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	5080880	5081025	.	-	2	ID=Cattle_Y_C00152;Parent=Cattle_Y_T00159;gene_id=Cattle_Y_G00093;transcript_id=Cattle_Y_T00159;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	5081121	5081234	.	-	2	ID=Cattle_Y_C00153;Parent=Cattle_Y_T00159;gene_id=Cattle_Y_G00093;transcript_id=Cattle_Y_T00159;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	5081418	5081493	.	-	0	ID=Cattle_Y_C00154;Parent=Cattle_Y_T00159;gene_id=Cattle_Y_G00093;transcript_id=Cattle_Y_T00159;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	5082267	5082661	.	-	2	ID=Cattle_Y_C00155;Parent=Cattle_Y_T00159;gene_id=Cattle_Y_G00093;transcript_id=Cattle_Y_T00159;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	5082744	5082807	.	-	0	ID=Cattle_Y_C00156;Parent=Cattle_Y_T00159;gene_id=Cattle_Y_G00093;transcript_id=Cattle_Y_T00159;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	5110715	5111452	.	+	.	ID=Cattle_Y_G00094;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00094;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	5110715	5111452	.	+	.	ID=Cattle_Y_T00160;Parent=Cattle_Y_G00094;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00094;transcript_id=Cattle_Y_T00160;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	5117555	5128609	.	+	.	ID=Cattle_Y_G00095;Dbxref=GeneID:132344704;Name=LOC132344704;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344704;gene_biotype=protein_coding;gene_id=Cattle_Y_G00095;source_id=gene-LOC132344704
haplotype2-0000357	CAT	mRNA	5117555	5128609	.	+	.	ID=Cattle_Y_T00161;Parent=Cattle_Y_G00095;Dbxref=GeneID:132344704,GenBank:XM_059884347.1;Name=XM_059884347.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344704;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=zinc finger protein 280B-like%2C transcript variant X1;transcript_id=Cattle_Y_T00161;gene_id=Cattle_Y_G00095;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884347.1
haplotype2-0000357	CAT	exon	5117555	5117689	.	+	.	ID=Cattle_Y_E00186;Parent=Cattle_Y_T00161;Dbxref=GeneID:132344704,GenBank:XM_059884347.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344704;product=zinc finger protein 280B-like, transcript variant X1;transcript_id=Cattle_Y_T00161;gene_id=Cattle_Y_G00095;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884347.1-1
haplotype2-0000357	CAT	exon	5126802	5128609	.	+	.	ID=Cattle_Y_E00187;Parent=Cattle_Y_T00161;Dbxref=GeneID:132344704,GenBank:XM_059884347.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344704;product=zinc finger protein 280B-like, transcript variant X1;transcript_id=Cattle_Y_T00161;gene_id=Cattle_Y_G00095;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884347.1-2
haplotype2-0000357	CAT	CDS	5126873	5128504	.	+	0	ID=Cattle_Y_C00157;Parent=Cattle_Y_T00161;gene_id=Cattle_Y_G00095;transcript_id=Cattle_Y_T00161;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	5117555	5128609	.	+	.	ID=Cattle_Y_T00162;Parent=Cattle_Y_G00095;Dbxref=GeneID:132344704,GenBank:XM_059884348.1;Name=XM_059884348.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344704;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=zinc finger protein 280B-like%2C transcript variant X2;transcript_id=Cattle_Y_T00162;gene_id=Cattle_Y_G00095;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884348.1
haplotype2-0000357	CAT	exon	5117555	5117647	.	+	.	ID=Cattle_Y_E00188;Parent=Cattle_Y_T00162;Dbxref=GeneID:132344704,GenBank:XM_059884348.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344704;product=zinc finger protein 280B-like, transcript variant X2;transcript_id=Cattle_Y_T00162;gene_id=Cattle_Y_G00095;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884348.1-1
haplotype2-0000357	CAT	exon	5126802	5128609	.	+	.	ID=Cattle_Y_E00189;Parent=Cattle_Y_T00162;Dbxref=GeneID:132344704,GenBank:XM_059884348.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344704;product=zinc finger protein 280B-like, transcript variant X2;transcript_id=Cattle_Y_T00162;gene_id=Cattle_Y_G00095;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884348.1-2
haplotype2-0000357	CAT	CDS	5126873	5128504	.	+	0	ID=Cattle_Y_C00158;Parent=Cattle_Y_T00162;gene_id=Cattle_Y_G00095;transcript_id=Cattle_Y_T00162;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	5132908	5133435	.	+	.	ID=Cattle_Y_G00096;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00096;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	5132908	5133435	.	+	.	ID=Cattle_Y_T00163;Parent=Cattle_Y_G00096;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00163;gene_id=Cattle_Y_G00096;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	5132908	5133031	.	+	.	ID=Cattle_Y_E00190;Parent=Cattle_Y_T00163;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00163;gene_id=Cattle_Y_G00096;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	5133104	5133435	.	+	.	ID=Cattle_Y_E00191;Parent=Cattle_Y_T00163;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00163;gene_id=Cattle_Y_G00096;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	5132908	5133031	.	+	0	ID=Cattle_Y_C00159;Parent=Cattle_Y_T00163;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_49;gene_id=Cattle_Y_G00096;transcript_id=Cattle_Y_T00163;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	5133104	5133435	.	+	2	ID=Cattle_Y_C00160;Parent=Cattle_Y_T00163;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_49;gene_id=Cattle_Y_G00096;transcript_id=Cattle_Y_T00163;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	5242947	5245280	.	+	.	ID=Cattle_Y_G00097;Dbxref=GeneID:132344553;Name=LOC132344553;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344553;gene_biotype=protein_coding;gene_id=Cattle_Y_G00097;source_id=gene-LOC132344553
haplotype2-0000357	CAT	mRNA	5242947	5245280	.	+	.	ID=Cattle_Y_T00164;Parent=Cattle_Y_G00097;Dbxref=GeneID:132344553,GenBank:XM_059884235.1;Name=XM_059884235.1;gbkey=mRNA;gene=LOC132344553;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 49%25 coverage of the annotated genomic feature by RNAseq alignments;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00164;gene_id=Cattle_Y_G00097;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884235.1
haplotype2-0000357	CAT	exon	5242947	5243456	.	+	.	ID=Cattle_Y_E00192;Parent=Cattle_Y_T00164;Dbxref=GeneID:132344553,GenBank:XM_059884235.1;gbkey=mRNA;gene=LOC132344553;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00164;gene_id=Cattle_Y_G00097;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884235.1-1
haplotype2-0000357	CAT	exon	5243887	5244464	.	+	.	ID=Cattle_Y_E00193;Parent=Cattle_Y_T00164;Dbxref=GeneID:132344553,GenBank:XM_059884235.1;gbkey=mRNA;gene=LOC132344553;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00164;gene_id=Cattle_Y_G00097;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884235.1-1
haplotype2-0000357	CAT	exon	5245262	5245280	.	+	.	ID=Cattle_Y_E00194;Parent=Cattle_Y_T00164;Dbxref=GeneID:132344553,GenBank:XM_059884235.1;gbkey=mRNA;gene=LOC132344553;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00164;gene_id=Cattle_Y_G00097;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884235.1-3
haplotype2-0000357	CAT	CDS	5242947	5243456	.	+	0	ID=Cattle_Y_C00161;Parent=Cattle_Y_T00164;gene_id=Cattle_Y_G00097;transcript_id=Cattle_Y_T00164;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	5243887	5244464	.	+	0	ID=Cattle_Y_C00162;Parent=Cattle_Y_T00164;gene_id=Cattle_Y_G00097;transcript_id=Cattle_Y_T00164;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	5245262	5245280	.	+	1	ID=Cattle_Y_C00163;Parent=Cattle_Y_T00164;gene_id=Cattle_Y_G00097;transcript_id=Cattle_Y_T00164;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	5448460	5451461	.	-	.	ID=Cattle_Y_G00098;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00098;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	5543152	5543715	.	-	.	ID=Cattle_Y_G00099;Dbxref=GeneID:132344690;Name=LOC132344690;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344690;gene_biotype=protein_coding;partial=true;start_range=.,34773871;gene_id=Cattle_Y_G00099;source_id=gene-LOC132344690
haplotype2-0000357	CAT	mRNA	5543152	5543715	.	-	.	ID=Cattle_Y_T00165;Parent=Cattle_Y_G00099;Dbxref=GeneID:132344690,GenBank:XM_059884331.1;Name=XM_059884331.1;gbkey=mRNA;gene=LOC132344690;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 34%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,34773871;transcript_id=Cattle_Y_T00165;gene_id=Cattle_Y_G00099;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884331.1
haplotype2-0000357	CAT	exon	5543152	5543715	.	-	.	ID=Cattle_Y_E00195;Parent=Cattle_Y_T00165;Dbxref=GeneID:132344690,GenBank:XM_059884331.1;gbkey=mRNA;gene=LOC132344690;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,34773871;transcript_id=Cattle_Y_T00165;gene_id=Cattle_Y_G00099;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884331.1-1
haplotype2-0000357	CAT	CDS	5543152	5543715	.	-	0	ID=Cattle_Y_C00164;Parent=Cattle_Y_T00165;Dbxref=GeneID:132344690,GenBank:XP_059740314.1;Name=XP_059740314.1;gbkey=CDS;gene=LOC132344690;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740314.1_5;start_range=.,34773871;gene_id=Cattle_Y_G00099;transcript_id=Cattle_Y_T00165;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	5619479	5620053	.	+	.	ID=Cattle_Y_G00100;Dbxref=GeneID:132344660;Name=LOC132344660;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344660;gene_biotype=likely_pseudogene;partial=true;start_range=.,24728184;gene_id=Cattle_Y_G00100;source_id=gene-LOC132344660
haplotype2-0000357	CAT	mRNA	5619479	5620053	.	+	.	ID=Cattle_Y_T00166;Parent=Cattle_Y_G00100;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;Name=XM_059884305.1;gbkey=mRNA;gene=LOC132344660;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00166;gene_id=Cattle_Y_G00100;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884305.1
haplotype2-0000357	CAT	exon	5619479	5619604	.	+	.	ID=Cattle_Y_E00196;Parent=Cattle_Y_T00166;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00166;gene_id=Cattle_Y_G00100;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-1
haplotype2-0000357	CAT	exon	5619668	5620053	.	+	.	ID=Cattle_Y_E00197;Parent=Cattle_Y_T00166;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00166;gene_id=Cattle_Y_G00100;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-2
haplotype2-0000357	CAT	CDS	5619797	5620053	.	+	0	ID=Cattle_Y_C00165;Parent=Cattle_Y_T00166;Dbxref=GeneID:132344660,GenBank:XP_059740288.1;Name=XP_059740288.1;gbkey=CDS;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740288.1_16;start_range=.,24728184;gene_id=Cattle_Y_G00100;transcript_id=Cattle_Y_T00166;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	5653116	5653643	.	-	.	ID=Cattle_Y_G00101;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00101;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	5653116	5653643	.	-	.	ID=Cattle_Y_T00167;Parent=Cattle_Y_G00101;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00167;gene_id=Cattle_Y_G00101;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	5653116	5653447	.	-	.	ID=Cattle_Y_E00198;Parent=Cattle_Y_T00167;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00167;gene_id=Cattle_Y_G00101;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	exon	5653520	5653643	.	-	.	ID=Cattle_Y_E00199;Parent=Cattle_Y_T00167;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00167;gene_id=Cattle_Y_G00101;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	CDS	5653116	5653447	.	-	2	ID=Cattle_Y_C00166;Parent=Cattle_Y_T00167;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_29;gene_id=Cattle_Y_G00101;transcript_id=Cattle_Y_T00167;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	5653520	5653643	.	-	0	ID=Cattle_Y_C00167;Parent=Cattle_Y_T00167;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_29;gene_id=Cattle_Y_G00101;transcript_id=Cattle_Y_T00167;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	5657938	5668975	.	-	.	ID=Cattle_Y_G00102;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00102;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	5657938	5668975	.	-	.	ID=Cattle_Y_T00168;Parent=Cattle_Y_G00102;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00168;gene_id=Cattle_Y_G00102;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	5657938	5659745	.	-	.	ID=Cattle_Y_E00200;Parent=Cattle_Y_T00168;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00168;gene_id=Cattle_Y_G00102;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-2
haplotype2-0000357	CAT	exon	5668848	5668975	.	-	.	ID=Cattle_Y_E00201;Parent=Cattle_Y_T00168;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00168;gene_id=Cattle_Y_G00102;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	CDS	5658043	5659674	.	-	0	ID=Cattle_Y_C00168;Parent=Cattle_Y_T00168;Dbxref=GeneID:768254,GenBank:NP_001071588.1,BGD:BT17804;Name=NP_001071588.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ZNF280BY;inference=similar to AA sequence (same species):RefSeq:NP_001071588.1;product=zinc finger protein 280B;protein_id=NP_001071588.1_18;gene_id=Cattle_Y_G00102;transcript_id=Cattle_Y_T00168;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	5703588	5705717	.	+	.	ID=Cattle_Y_G00103;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00103;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	5703588	5705717	.	+	.	ID=Cattle_Y_T00169;Parent=Cattle_Y_G00103;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00169;gene_id=Cattle_Y_G00103;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	5703588	5703651	.	+	.	ID=Cattle_Y_E00202;Parent=Cattle_Y_T00169;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00169;gene_id=Cattle_Y_G00103;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	exon	5703734	5704128	.	+	.	ID=Cattle_Y_E00203;Parent=Cattle_Y_T00169;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00169;gene_id=Cattle_Y_G00103;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	5704910	5704985	.	+	.	ID=Cattle_Y_E00204;Parent=Cattle_Y_T00169;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00169;gene_id=Cattle_Y_G00103;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	5705169	5705282	.	+	.	ID=Cattle_Y_E00205;Parent=Cattle_Y_T00169;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00169;gene_id=Cattle_Y_G00103;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	5705378	5705523	.	+	.	ID=Cattle_Y_E00206;Parent=Cattle_Y_T00169;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00169;gene_id=Cattle_Y_G00103;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	5705640	5705717	.	+	.	ID=Cattle_Y_E00207;Parent=Cattle_Y_T00169;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00169;gene_id=Cattle_Y_G00103;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	CDS	5703856	5704128	.	+	0	ID=Cattle_Y_C00169;Parent=Cattle_Y_T00169;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_31;gene_id=Cattle_Y_G00103;transcript_id=Cattle_Y_T00169;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	5704910	5704985	.	+	0	ID=Cattle_Y_C00170;Parent=Cattle_Y_T00169;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_31;gene_id=Cattle_Y_G00103;transcript_id=Cattle_Y_T00169;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	5705169	5705282	.	+	2	ID=Cattle_Y_C00171;Parent=Cattle_Y_T00169;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_31;gene_id=Cattle_Y_G00103;transcript_id=Cattle_Y_T00169;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	5705378	5705523	.	+	2	ID=Cattle_Y_C00172;Parent=Cattle_Y_T00169;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_31;gene_id=Cattle_Y_G00103;transcript_id=Cattle_Y_T00169;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	5705640	5705717	.	+	0	ID=Cattle_Y_C00173;Parent=Cattle_Y_T00169;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_31;gene_id=Cattle_Y_G00103;transcript_id=Cattle_Y_T00169;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	5714805	5745851	.	-	.	ID=Cattle_Y_G00104;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00104;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	5714805	5745851	.	-	.	ID=Cattle_Y_T00170;Parent=Cattle_Y_G00104;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00170;gene_id=Cattle_Y_G00104;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	5714805	5716630	.	-	.	ID=Cattle_Y_E00208;Parent=Cattle_Y_T00170;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00170;gene_id=Cattle_Y_G00104;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	exon	5745712	5745851	.	-	.	ID=Cattle_Y_E00209;Parent=Cattle_Y_T00170;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00170;gene_id=Cattle_Y_G00104;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	CDS	5714805	5716403	.	-	0	ID=Cattle_Y_C00174;Parent=Cattle_Y_T00170;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_14;gene_id=Cattle_Y_G00104;transcript_id=Cattle_Y_T00170;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	5843096	5845246	.	-	.	ID=Cattle_Y_G00105;Dbxref=GeneID:132344655;Name=LOC132344655;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344655;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00105;source_id=gene-LOC132344655
haplotype2-0000357	CAT	exon	5843096	5843173	.	-	.	ID=Cattle_Y_T00171;Parent=Cattle_Y_G00105;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00105;transcript_id=Cattle_Y_T00171;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655
haplotype2-0000357	CAT	exon	5843290	5843435	.	-	.	ID=Cattle_Y_T00172;Parent=Cattle_Y_G00105;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00105;transcript_id=Cattle_Y_T00172;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-2
haplotype2-0000357	CAT	exon	5843531	5843642	.	-	.	ID=Cattle_Y_T00173;Parent=Cattle_Y_G00105;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00105;transcript_id=Cattle_Y_T00173;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-3
haplotype2-0000357	CAT	exon	5843826	5843903	.	-	.	ID=Cattle_Y_T00174;Parent=Cattle_Y_G00105;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00105;transcript_id=Cattle_Y_T00174;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-4
haplotype2-0000357	CAT	exon	5844697	5845091	.	-	.	ID=Cattle_Y_T00175;Parent=Cattle_Y_G00105;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00105;transcript_id=Cattle_Y_T00175;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-5
haplotype2-0000357	CAT	exon	5845174	5845246	.	-	.	ID=Cattle_Y_T00176;Parent=Cattle_Y_G00105;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00105;transcript_id=Cattle_Y_T00176;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-6
haplotype2-0000357	CAT	gene	5944834	5945556	.	+	.	ID=Cattle_Y_G00106;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00106;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	5988997	5989719	.	-	.	ID=Cattle_Y_G00107;Dbxref=GeneID:132344685;Name=LOC132344685;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344685;gene_biotype=protein_coding;partial=true;start_range=.,33040068;gene_id=Cattle_Y_G00107;source_id=gene-LOC132344685
haplotype2-0000357	CAT	mRNA	5988997	5989719	.	-	.	ID=Cattle_Y_T00177;Parent=Cattle_Y_G00107;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;Name=XM_059884326.1;gbkey=mRNA;gene=LOC132344685;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 42%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00177;gene_id=Cattle_Y_G00107;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884326.1
haplotype2-0000357	CAT	exon	5988997	5989719	.	-	.	ID=Cattle_Y_E00210;Parent=Cattle_Y_T00177;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;gbkey=mRNA;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00177;gene_id=Cattle_Y_G00107;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884326.1-1
haplotype2-0000357	CAT	CDS	5988997	5989599	.	-	0	ID=Cattle_Y_C00175;Parent=Cattle_Y_T00177;Dbxref=GeneID:132344685,GenBank:XP_059740309.1;Name=XP_059740309.1;gbkey=CDS;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740309.1;start_range=.,33040068;gene_id=Cattle_Y_G00107;transcript_id=Cattle_Y_T00177;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	5996241	5996963	.	+	.	ID=Cattle_Y_G00108;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00108;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	6040390	6041112	.	-	.	ID=Cattle_Y_G00109;Dbxref=GeneID:132344685;Name=LOC132344685;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344685;gene_biotype=protein_coding;partial=true;start_range=.,33040068;gene_id=Cattle_Y_G00109;source_id=gene-LOC132344685
haplotype2-0000357	CAT	mRNA	6040390	6041112	.	-	.	ID=Cattle_Y_T00178;Parent=Cattle_Y_G00109;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;Name=XM_059884326.1;gbkey=mRNA;gene=LOC132344685;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 42%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00178;gene_id=Cattle_Y_G00109;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884326.1
haplotype2-0000357	CAT	exon	6040390	6041112	.	-	.	ID=Cattle_Y_E00211;Parent=Cattle_Y_T00178;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;gbkey=mRNA;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00178;gene_id=Cattle_Y_G00109;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884326.1-1
haplotype2-0000357	CAT	CDS	6040390	6040992	.	-	0	ID=Cattle_Y_C00176;Parent=Cattle_Y_T00178;Dbxref=GeneID:132344685,GenBank:XP_059740309.1;Name=XP_059740309.1;gbkey=CDS;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740309.1_5;start_range=.,33040068;gene_id=Cattle_Y_G00109;transcript_id=Cattle_Y_T00178;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	6047637	6048361	.	+	.	ID=Cattle_Y_G00110;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00110;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	6132416	6133138	.	+	.	ID=Cattle_Y_G00111;Dbxref=GeneID:132344685;Name=LOC132344685;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344685;gene_biotype=protein_coding;partial=true;start_range=.,33040068;gene_id=Cattle_Y_G00111;source_id=gene-LOC132344685
haplotype2-0000357	CAT	mRNA	6132416	6133138	.	+	.	ID=Cattle_Y_T00179;Parent=Cattle_Y_G00111;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;Name=XM_059884326.1;gbkey=mRNA;gene=LOC132344685;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 42%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00179;gene_id=Cattle_Y_G00111;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884326.1
haplotype2-0000357	CAT	exon	6132416	6133138	.	+	.	ID=Cattle_Y_E00212;Parent=Cattle_Y_T00179;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;gbkey=mRNA;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00179;gene_id=Cattle_Y_G00111;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884326.1-1
haplotype2-0000357	CAT	CDS	6132536	6133138	.	+	0	ID=Cattle_Y_C00177;Parent=Cattle_Y_T00179;Dbxref=GeneID:132344685,GenBank:XP_059740309.1;Name=XP_059740309.1;gbkey=CDS;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740309.1_9;start_range=.,33040068;gene_id=Cattle_Y_G00111;transcript_id=Cattle_Y_T00179;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	6176541	6177263	.	-	.	ID=Cattle_Y_G00112;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00112;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	6276964	6279951	.	+	.	ID=Cattle_Y_G00113;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00113;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	6376187	6407223	.	+	.	ID=Cattle_Y_G00114;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00114;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	6376187	6407223	.	+	.	ID=Cattle_Y_T00180;Parent=Cattle_Y_G00114;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00180;gene_id=Cattle_Y_G00114;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	6376187	6376326	.	+	.	ID=Cattle_Y_E00213;Parent=Cattle_Y_T00180;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00180;gene_id=Cattle_Y_G00114;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	6405392	6407223	.	+	.	ID=Cattle_Y_E00214;Parent=Cattle_Y_T00180;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00180;gene_id=Cattle_Y_G00114;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	6406673	6407223	.	+	0	ID=Cattle_Y_C00178;Parent=Cattle_Y_T00180;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_15;gene_id=Cattle_Y_G00114;transcript_id=Cattle_Y_T00180;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	6416324	6475636	.	-	.	ID=Cattle_Y_G00115;Dbxref=GeneID:132344710;Name=LOC132344710;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344710;gene_biotype=protein_coding;gene_id=Cattle_Y_G00115;source_id=gene-LOC132344710
haplotype2-0000357	CAT	mRNA	6416324	6475636	.	-	.	ID=Cattle_Y_T00181;Parent=Cattle_Y_G00115;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;Name=XM_059884354.1;gbkey=mRNA;gene=LOC132344710;model_evidence=Supporting evidence includes similarity to: 3 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00181;gene_id=Cattle_Y_G00115;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884354.1
haplotype2-0000357	CAT	exon	6416324	6416401	.	-	.	ID=Cattle_Y_E00215;Parent=Cattle_Y_T00181;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;gbkey=mRNA;gene=LOC132344710;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00181;gene_id=Cattle_Y_G00115;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884354.1-6
haplotype2-0000357	CAT	exon	6416518	6416663	.	-	.	ID=Cattle_Y_E00216;Parent=Cattle_Y_T00181;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;gbkey=mRNA;gene=LOC132344710;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00181;gene_id=Cattle_Y_G00115;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884354.1-6
haplotype2-0000357	CAT	exon	6416759	6416872	.	-	.	ID=Cattle_Y_E00217;Parent=Cattle_Y_T00181;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;gbkey=mRNA;gene=LOC132344710;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00181;gene_id=Cattle_Y_G00115;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884354.1-6
haplotype2-0000357	CAT	exon	6417056	6417131	.	-	.	ID=Cattle_Y_E00218;Parent=Cattle_Y_T00181;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;gbkey=mRNA;gene=LOC132344710;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00181;gene_id=Cattle_Y_G00115;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884354.1-6
haplotype2-0000357	CAT	exon	6417905	6418299	.	-	.	ID=Cattle_Y_E00219;Parent=Cattle_Y_T00181;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;gbkey=mRNA;gene=LOC132344710;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00181;gene_id=Cattle_Y_G00115;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884354.1-6
haplotype2-0000357	CAT	exon	6475513	6475636	.	-	.	ID=Cattle_Y_E00220;Parent=Cattle_Y_T00181;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;gbkey=mRNA;gene=LOC132344710;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00181;gene_id=Cattle_Y_G00115;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884354.1-1
haplotype2-0000357	CAT	CDS	6416324	6416401	.	-	0	ID=Cattle_Y_C00179;Parent=Cattle_Y_T00181;gene_id=Cattle_Y_G00115;transcript_id=Cattle_Y_T00181;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	6416518	6416663	.	-	2	ID=Cattle_Y_C00180;Parent=Cattle_Y_T00181;gene_id=Cattle_Y_G00115;transcript_id=Cattle_Y_T00181;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	6416759	6416872	.	-	2	ID=Cattle_Y_C00181;Parent=Cattle_Y_T00181;gene_id=Cattle_Y_G00115;transcript_id=Cattle_Y_T00181;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	6417056	6417131	.	-	0	ID=Cattle_Y_C00182;Parent=Cattle_Y_T00181;gene_id=Cattle_Y_G00115;transcript_id=Cattle_Y_T00181;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	6417905	6418299	.	-	2	ID=Cattle_Y_C00183;Parent=Cattle_Y_T00181;gene_id=Cattle_Y_G00115;transcript_id=Cattle_Y_T00181;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	6475513	6475636	.	-	0	ID=Cattle_Y_C00184;Parent=Cattle_Y_T00181;gene_id=Cattle_Y_G00115;transcript_id=Cattle_Y_T00181;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	6446371	6447108	.	+	.	ID=Cattle_Y_G00116;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00116;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	6446371	6447108	.	+	.	ID=Cattle_Y_T00182;Parent=Cattle_Y_G00116;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00116;transcript_id=Cattle_Y_T00182;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	6462453	6464297	.	+	.	ID=Cattle_Y_G00117;Dbxref=GeneID:132344680;Name=LOC132344680;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344680;gene_biotype=protein_coding;gene_id=Cattle_Y_G00117;source_id=gene-LOC132344680
haplotype2-0000357	CAT	mRNA	6462453	6464297	.	+	.	ID=Cattle_Y_T00183;Parent=Cattle_Y_G00117;Dbxref=GeneID:132344680,GenBank:XM_059884320.1;Name=XM_059884320.1;gbkey=mRNA;gene=LOC132344680;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 99%25 coverage of the annotated genomic feature by RNAseq alignments;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00183;gene_id=Cattle_Y_G00117;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884320.1
haplotype2-0000357	CAT	exon	6462453	6464297	.	+	.	ID=Cattle_Y_E00221;Parent=Cattle_Y_T00183;Dbxref=GeneID:132344680,GenBank:XM_059884320.1;gbkey=mRNA;gene=LOC132344680;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00183;gene_id=Cattle_Y_G00117;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884320.1-1
haplotype2-0000357	CAT	CDS	6462520	6464151	.	+	0	ID=Cattle_Y_C00185;Parent=Cattle_Y_T00183;gene_id=Cattle_Y_G00117;transcript_id=Cattle_Y_T00183;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	6483658	6492838	.	+	.	ID=Cattle_Y_G00118;Dbxref=GeneID:132344543;Name=LOC132344543;description=uncharacterized LOC132344543;gbkey=Gene;gene=LOC132344543;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00118;source_id=gene-LOC132344543
haplotype2-0000357	CAT	exon	6483658	6484050	.	+	.	ID=Cattle_Y_T00184;Parent=Cattle_Y_G00118;Dbxref=GeneID:132344543;gbkey=exon;gene=LOC132344543;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00118;transcript_id=Cattle_Y_T00184;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344543-4
haplotype2-0000357	CAT	exon	6491379	6491517	.	+	.	ID=Cattle_Y_T00185;Parent=Cattle_Y_G00118;Dbxref=GeneID:132344543;gbkey=exon;gene=LOC132344543;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00118;transcript_id=Cattle_Y_T00185;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344543-3
haplotype2-0000357	CAT	exon	6492222	6492348	.	+	.	ID=Cattle_Y_T00186;Parent=Cattle_Y_G00118;Dbxref=GeneID:132344543;gbkey=exon;gene=LOC132344543;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00118;transcript_id=Cattle_Y_T00186;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344543-2
haplotype2-0000357	CAT	exon	6492791	6492838	.	+	.	ID=Cattle_Y_T00187;Parent=Cattle_Y_G00118;Dbxref=GeneID:132344543;gbkey=exon;gene=LOC132344543;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00118;transcript_id=Cattle_Y_T00187;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344543
haplotype2-0000357	CAT	gene	6618440	6621427	.	+	.	ID=Cattle_Y_G00119;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00119;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	6717635	6748645	.	+	.	ID=Cattle_Y_G00120;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00120;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	6717635	6748645	.	+	.	ID=Cattle_Y_T00188;Parent=Cattle_Y_G00120;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00188;gene_id=Cattle_Y_G00120;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	6717635	6717774	.	+	.	ID=Cattle_Y_E00222;Parent=Cattle_Y_T00188;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00188;gene_id=Cattle_Y_G00120;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	6746807	6748645	.	+	.	ID=Cattle_Y_E00223;Parent=Cattle_Y_T00188;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00188;gene_id=Cattle_Y_G00120;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	6747034	6748645	.	+	0	ID=Cattle_Y_C00186;Parent=Cattle_Y_T00188;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_46;gene_id=Cattle_Y_G00120;transcript_id=Cattle_Y_T00188;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	6757746	6759665	.	-	.	ID=Cattle_Y_G00121;Dbxref=GeneID:132344659;Name=LOC132344659;description=testis-specific Y-encoded protein 1-like;end_range=24663580,.;gbkey=Gene;gene=LOC132344659;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00121;source_id=gene-LOC132344659
haplotype2-0000357	CAT	mRNA	6757746	6759665	.	-	.	ID=Cattle_Y_T00189;Parent=Cattle_Y_G00121;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;Name=XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00189;gene_id=Cattle_Y_G00121;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884304.1
haplotype2-0000357	CAT	exon	6757746	6757823	.	-	.	ID=Cattle_Y_E00224;Parent=Cattle_Y_T00189;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00189;gene_id=Cattle_Y_G00121;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-5
haplotype2-0000357	CAT	exon	6757940	6758085	.	-	.	ID=Cattle_Y_E00225;Parent=Cattle_Y_T00189;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00189;gene_id=Cattle_Y_G00121;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-4
haplotype2-0000357	CAT	exon	6758181	6758294	.	-	.	ID=Cattle_Y_E00226;Parent=Cattle_Y_T00189;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00189;gene_id=Cattle_Y_G00121;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-3
haplotype2-0000357	CAT	exon	6758478	6758553	.	-	.	ID=Cattle_Y_E00227;Parent=Cattle_Y_T00189;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00189;gene_id=Cattle_Y_G00121;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-2
haplotype2-0000357	CAT	exon	6759327	6759665	.	-	.	ID=Cattle_Y_E00228;Parent=Cattle_Y_T00189;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00189;gene_id=Cattle_Y_G00121;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-1
haplotype2-0000357	CAT	CDS	6757746	6757823	.	-	0	ID=Cattle_Y_C00187;Parent=Cattle_Y_T00189;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_8;gene_id=Cattle_Y_G00121;transcript_id=Cattle_Y_T00189;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	6757940	6758085	.	-	2	ID=Cattle_Y_C00188;Parent=Cattle_Y_T00189;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_8;gene_id=Cattle_Y_G00121;transcript_id=Cattle_Y_T00189;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	6758181	6758294	.	-	2	ID=Cattle_Y_C00189;Parent=Cattle_Y_T00189;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_8;gene_id=Cattle_Y_G00121;transcript_id=Cattle_Y_T00189;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	6758478	6758553	.	-	0	ID=Cattle_Y_C00190;Parent=Cattle_Y_T00189;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_8;gene_id=Cattle_Y_G00121;transcript_id=Cattle_Y_T00189;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	6759327	6759665	.	-	0	ID=Cattle_Y_C00191;Parent=Cattle_Y_T00189;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;end_range=24663580,.;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_8;gene_id=Cattle_Y_G00121;transcript_id=Cattle_Y_T00189;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	6783245	6783982	.	+	.	ID=Cattle_Y_G00122;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00122;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	6783245	6783982	.	+	.	ID=Cattle_Y_T00190;Parent=Cattle_Y_G00122;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00122;transcript_id=Cattle_Y_T00190;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	6790053	6801123	.	+	.	ID=Cattle_Y_G00123;Dbxref=GeneID:132344717;Name=LOC132344717;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344717;gene_biotype=protein_coding;gene_id=Cattle_Y_G00123;source_id=gene-LOC132344717
haplotype2-0000357	CAT	mRNA	6790053	6801123	.	+	.	ID=Cattle_Y_T00191;Parent=Cattle_Y_G00123;Dbxref=GeneID:132344717,GenBank:XM_059884362.1;Name=XM_059884362.1;gbkey=mRNA;gene=LOC132344717;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00191;gene_id=Cattle_Y_G00123;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884362.1
haplotype2-0000357	CAT	exon	6790053	6790162	.	+	.	ID=Cattle_Y_E00229;Parent=Cattle_Y_T00191;Dbxref=GeneID:132344717,GenBank:XM_059884362.1;gbkey=mRNA;gene=LOC132344717;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00191;gene_id=Cattle_Y_G00123;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884362.1-1
haplotype2-0000357	CAT	exon	6799315	6801123	.	+	.	ID=Cattle_Y_E00230;Parent=Cattle_Y_T00191;Dbxref=GeneID:132344717,GenBank:XM_059884362.1;gbkey=mRNA;gene=LOC132344717;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00191;gene_id=Cattle_Y_G00123;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884362.1-2
haplotype2-0000357	CAT	CDS	6799386	6801017	.	+	0	ID=Cattle_Y_C00192;Parent=Cattle_Y_T00191;gene_id=Cattle_Y_G00123;transcript_id=Cattle_Y_T00191;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	6805442	6805969	.	+	.	ID=Cattle_Y_G00124;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00124;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	6805442	6805969	.	+	.	ID=Cattle_Y_T00192;Parent=Cattle_Y_G00124;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00192;gene_id=Cattle_Y_G00124;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	6805442	6805565	.	+	.	ID=Cattle_Y_E00231;Parent=Cattle_Y_T00192;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00192;gene_id=Cattle_Y_G00124;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	6805638	6805969	.	+	.	ID=Cattle_Y_E00232;Parent=Cattle_Y_T00192;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00192;gene_id=Cattle_Y_G00124;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	6805442	6805565	.	+	0	ID=Cattle_Y_C00193;Parent=Cattle_Y_T00192;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_2;gene_id=Cattle_Y_G00124;transcript_id=Cattle_Y_T00192;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	6805638	6805969	.	+	2	ID=Cattle_Y_C00194;Parent=Cattle_Y_T00192;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_2;gene_id=Cattle_Y_G00124;transcript_id=Cattle_Y_T00192;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	6831734	6832275	.	-	.	ID=Cattle_Y_G00125;Dbxref=GeneID:132344657;Name=LOC132344657;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344657;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00125;source_id=gene-LOC132344657
haplotype2-0000357	CAT	mRNA	6831734	6832275	.	-	.	ID=Cattle_Y_T00193;Parent=Cattle_Y_G00125;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;Name=XM_059884302.1;gbkey=mRNA;gene=LOC132344657;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00193;gene_id=Cattle_Y_G00125;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884302.1
haplotype2-0000357	CAT	exon	6831734	6832086	.	-	.	ID=Cattle_Y_E00233;Parent=Cattle_Y_T00193;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00193;gene_id=Cattle_Y_G00125;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-2
haplotype2-0000357	CAT	exon	6832150	6832275	.	-	.	ID=Cattle_Y_E00234;Parent=Cattle_Y_T00193;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00193;gene_id=Cattle_Y_G00125;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-1
haplotype2-0000357	CAT	CDS	6831734	6831957	.	-	0	ID=Cattle_Y_C00195;Parent=Cattle_Y_T00193;Dbxref=GeneID:132344657,GenBank:XP_059740285.1;Name=XP_059740285.1;gbkey=CDS;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740285.1_8;gene_id=Cattle_Y_G00125;transcript_id=Cattle_Y_T00193;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	6907003	6908840	.	+	.	ID=Cattle_Y_G00126;Dbxref=GeneID:132344719;Name=LOC132344719;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344719;gene_biotype=protein_coding;gene_id=Cattle_Y_G00126;source_id=gene-LOC132344719
haplotype2-0000357	CAT	mRNA	6907003	6908840	.	+	.	ID=Cattle_Y_T00194;Parent=Cattle_Y_G00126;Dbxref=GeneID:132344719,GenBank:XM_059884364.1;Name=XM_059884364.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344719;model_evidence=Supporting evidence includes similarity to: 4 Proteins%2C and 97%25 coverage of the annotated genomic feature by RNAseq alignments;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00194;gene_id=Cattle_Y_G00126;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884364.1
haplotype2-0000357	CAT	exon	6907003	6907599	.	+	.	ID=Cattle_Y_E00235;Parent=Cattle_Y_T00194;Dbxref=GeneID:132344719,GenBank:XM_059884364.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344719;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00194;gene_id=Cattle_Y_G00126;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884364.1-1
haplotype2-0000357	CAT	exon	6908030	6908840	.	+	.	ID=Cattle_Y_E00236;Parent=Cattle_Y_T00194;Dbxref=GeneID:132344719,GenBank:XM_059884364.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344719;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00194;gene_id=Cattle_Y_G00126;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884364.1-2
haplotype2-0000357	CAT	CDS	6907090	6907599	.	+	0	ID=Cattle_Y_C00196;Parent=Cattle_Y_T00194;gene_id=Cattle_Y_G00126;transcript_id=Cattle_Y_T00194;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	6908030	6908764	.	+	0	ID=Cattle_Y_C00197;Parent=Cattle_Y_T00194;gene_id=Cattle_Y_G00126;transcript_id=Cattle_Y_T00194;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	7073305	7104347	.	+	.	ID=Cattle_Y_G00127;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00127;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	7073305	7104347	.	+	.	ID=Cattle_Y_T00195;Parent=Cattle_Y_G00127;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00195;gene_id=Cattle_Y_G00127;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	7073305	7073444	.	+	.	ID=Cattle_Y_E00237;Parent=Cattle_Y_T00195;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00195;gene_id=Cattle_Y_G00127;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	7102514	7104347	.	+	.	ID=Cattle_Y_E00238;Parent=Cattle_Y_T00195;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00195;gene_id=Cattle_Y_G00127;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	7102740	7104347	.	+	0	ID=Cattle_Y_C00198;Parent=Cattle_Y_T00195;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_40;gene_id=Cattle_Y_G00127;transcript_id=Cattle_Y_T00195;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	7113540	7115441	.	-	.	ID=Cattle_Y_G00128;Dbxref=GeneID:132344659;Name=LOC132344659;description=testis-specific Y-encoded protein 1-like;end_range=24663580,.;gbkey=Gene;gene=LOC132344659;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00128;source_id=gene-LOC132344659
haplotype2-0000357	CAT	mRNA	7113540	7115441	.	-	.	ID=Cattle_Y_T00196;Parent=Cattle_Y_G00128;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;Name=XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00196;gene_id=Cattle_Y_G00128;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884304.1
haplotype2-0000357	CAT	exon	7113540	7113617	.	-	.	ID=Cattle_Y_E00239;Parent=Cattle_Y_T00196;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00196;gene_id=Cattle_Y_G00128;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-5
haplotype2-0000357	CAT	exon	7113734	7113879	.	-	.	ID=Cattle_Y_E00240;Parent=Cattle_Y_T00196;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00196;gene_id=Cattle_Y_G00128;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-4
haplotype2-0000357	CAT	exon	7113975	7114088	.	-	.	ID=Cattle_Y_E00241;Parent=Cattle_Y_T00196;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00196;gene_id=Cattle_Y_G00128;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-3
haplotype2-0000357	CAT	exon	7114272	7114347	.	-	.	ID=Cattle_Y_E00242;Parent=Cattle_Y_T00196;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00196;gene_id=Cattle_Y_G00128;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-2
haplotype2-0000357	CAT	exon	7115121	7115441	.	-	.	ID=Cattle_Y_E00243;Parent=Cattle_Y_T00196;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00196;gene_id=Cattle_Y_G00128;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-1
haplotype2-0000357	CAT	CDS	7113540	7113617	.	-	0	ID=Cattle_Y_C00199;Parent=Cattle_Y_T00196;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_10;gene_id=Cattle_Y_G00128;transcript_id=Cattle_Y_T00196;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	7113734	7113879	.	-	2	ID=Cattle_Y_C00200;Parent=Cattle_Y_T00196;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_10;gene_id=Cattle_Y_G00128;transcript_id=Cattle_Y_T00196;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	7113975	7114088	.	-	2	ID=Cattle_Y_C00201;Parent=Cattle_Y_T00196;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_10;gene_id=Cattle_Y_G00128;transcript_id=Cattle_Y_T00196;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	7114272	7114347	.	-	0	ID=Cattle_Y_C00202;Parent=Cattle_Y_T00196;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_10;gene_id=Cattle_Y_G00128;transcript_id=Cattle_Y_T00196;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	7115121	7115441	.	-	0	ID=Cattle_Y_C00203;Parent=Cattle_Y_T00196;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;end_range=24663580,.;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_10;gene_id=Cattle_Y_G00128;transcript_id=Cattle_Y_T00196;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	7152864	7163809	.	+	.	ID=Cattle_Y_G00129;Dbxref=GeneID:132344681;Name=LOC132344681;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344681;gene_biotype=protein_coding;gene_id=Cattle_Y_G00129;source_id=gene-LOC132344681
haplotype2-0000357	CAT	mRNA	7152864	7163809	.	+	.	ID=Cattle_Y_T00197;Parent=Cattle_Y_G00129;Dbxref=GeneID:132344681,GenBank:XM_059884321.1;Name=XM_059884321.1;gbkey=mRNA;gene=LOC132344681;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00197;gene_id=Cattle_Y_G00129;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884321.1
haplotype2-0000357	CAT	exon	7152864	7152989	.	+	.	ID=Cattle_Y_E00244;Parent=Cattle_Y_T00197;Dbxref=GeneID:132344681,GenBank:XM_059884321.1;gbkey=mRNA;gene=LOC132344681;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00197;gene_id=Cattle_Y_G00129;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884321.1-1
haplotype2-0000357	CAT	exon	7162002	7163809	.	+	.	ID=Cattle_Y_E00245;Parent=Cattle_Y_T00197;Dbxref=GeneID:132344681,GenBank:XM_059884321.1;gbkey=mRNA;gene=LOC132344681;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00197;gene_id=Cattle_Y_G00129;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884321.1-2
haplotype2-0000357	CAT	CDS	7162073	7163704	.	+	0	ID=Cattle_Y_C00204;Parent=Cattle_Y_T00197;Dbxref=GeneID:132344681,GenBank:XP_059740304.1;Name=XP_059740304.1;gbkey=CDS;gene=LOC132344681;product=zinc finger protein 280B-like;protein_id=XP_059740304.1_3;gene_id=Cattle_Y_G00129;transcript_id=Cattle_Y_T00197;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	7168098	7168625	.	+	.	ID=Cattle_Y_G00130;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00130;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	7168098	7168625	.	+	.	ID=Cattle_Y_T00198;Parent=Cattle_Y_G00130;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00198;gene_id=Cattle_Y_G00130;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	7168098	7168221	.	+	.	ID=Cattle_Y_E00246;Parent=Cattle_Y_T00198;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00198;gene_id=Cattle_Y_G00130;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	7168294	7168625	.	+	.	ID=Cattle_Y_E00247;Parent=Cattle_Y_T00198;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00198;gene_id=Cattle_Y_G00130;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	7168098	7168221	.	+	0	ID=Cattle_Y_C00205;Parent=Cattle_Y_T00198;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_5;gene_id=Cattle_Y_G00130;transcript_id=Cattle_Y_T00198;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	7168294	7168625	.	+	2	ID=Cattle_Y_C00206;Parent=Cattle_Y_T00198;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_5;gene_id=Cattle_Y_G00130;transcript_id=Cattle_Y_T00198;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	7194389	7194930	.	-	.	ID=Cattle_Y_G00131;Dbxref=GeneID:132344657;Name=LOC132344657;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344657;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00131;source_id=gene-LOC132344657
haplotype2-0000357	CAT	mRNA	7194389	7194930	.	-	.	ID=Cattle_Y_T00199;Parent=Cattle_Y_G00131;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;Name=XM_059884302.1;gbkey=mRNA;gene=LOC132344657;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00199;gene_id=Cattle_Y_G00131;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884302.1
haplotype2-0000357	CAT	exon	7194389	7194741	.	-	.	ID=Cattle_Y_E00248;Parent=Cattle_Y_T00199;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00199;gene_id=Cattle_Y_G00131;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-2
haplotype2-0000357	CAT	exon	7194805	7194930	.	-	.	ID=Cattle_Y_E00249;Parent=Cattle_Y_T00199;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00199;gene_id=Cattle_Y_G00131;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-1
haplotype2-0000357	CAT	CDS	7194389	7194612	.	-	0	ID=Cattle_Y_C00207;Parent=Cattle_Y_T00199;Dbxref=GeneID:132344657,GenBank:XP_059740285.1;Name=XP_059740285.1;gbkey=CDS;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740285.1_2;gene_id=Cattle_Y_G00131;transcript_id=Cattle_Y_T00199;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	7262184	7262912	.	-	.	ID=Cattle_Y_G00132;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00132;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	7269560	7272132	.	+	.	ID=Cattle_Y_G00133;Dbxref=GeneID:132344544;Name=LOC132344544;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344544;gene_biotype=protein_coding;gene_id=Cattle_Y_G00133;source_id=gene-LOC132344544
haplotype2-0000357	CAT	mRNA	7269560	7272132	.	+	.	ID=Cattle_Y_T00200;Parent=Cattle_Y_G00133;Dbxref=GeneID:132344544,GenBank:XM_059884230.1;Name=XM_059884230.1;gbkey=mRNA;gene=LOC132344544;model_evidence=Supporting evidence includes similarity to: 4 Proteins%2C and 87%25 coverage of the annotated genomic feature by RNAseq alignments;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00200;gene_id=Cattle_Y_G00133;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884230.1
haplotype2-0000357	CAT	exon	7269560	7270083	.	+	.	ID=Cattle_Y_E00250;Parent=Cattle_Y_T00200;Dbxref=GeneID:132344544,GenBank:XM_059884230.1;gbkey=mRNA;gene=LOC132344544;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00200;gene_id=Cattle_Y_G00133;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884230.1-1
haplotype2-0000357	CAT	exon	7270514	7271132	.	+	.	ID=Cattle_Y_E00251;Parent=Cattle_Y_T00200;Dbxref=GeneID:132344544,GenBank:XM_059884230.1;gbkey=mRNA;gene=LOC132344544;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00200;gene_id=Cattle_Y_G00133;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884230.1-1
haplotype2-0000357	CAT	exon	7272104	7272132	.	+	.	ID=Cattle_Y_E00252;Parent=Cattle_Y_T00200;Dbxref=GeneID:132344544,GenBank:XM_059884230.1;gbkey=mRNA;gene=LOC132344544;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00200;gene_id=Cattle_Y_G00133;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884230.1-3
haplotype2-0000357	CAT	CDS	7269574	7270083	.	+	0	ID=Cattle_Y_C00208;Parent=Cattle_Y_T00200;gene_id=Cattle_Y_G00133;transcript_id=Cattle_Y_T00200;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	7270514	7271132	.	+	0	ID=Cattle_Y_C00209;Parent=Cattle_Y_T00200;gene_id=Cattle_Y_G00133;transcript_id=Cattle_Y_T00200;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	7272104	7272132	.	+	2	ID=Cattle_Y_C00210;Parent=Cattle_Y_T00200;gene_id=Cattle_Y_G00133;transcript_id=Cattle_Y_T00200;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	7475834	7477994	.	-	.	ID=Cattle_Y_G00134;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00134;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	7475834	7475911	.	-	.	ID=Cattle_Y_T00201;Parent=Cattle_Y_G00134;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00134;transcript_id=Cattle_Y_T00201;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	exon	7476028	7476173	.	-	.	ID=Cattle_Y_T00202;Parent=Cattle_Y_G00134;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00134;transcript_id=Cattle_Y_T00202;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	7476269	7476380	.	-	.	ID=Cattle_Y_T00203;Parent=Cattle_Y_G00134;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00134;transcript_id=Cattle_Y_T00203;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	7476564	7476641	.	-	.	ID=Cattle_Y_T00204;Parent=Cattle_Y_G00134;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00134;transcript_id=Cattle_Y_T00204;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	7477445	7477839	.	-	.	ID=Cattle_Y_T00205;Parent=Cattle_Y_G00134;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00134;transcript_id=Cattle_Y_T00205;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	7477922	7477994	.	-	.	ID=Cattle_Y_T00206;Parent=Cattle_Y_G00134;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00134;transcript_id=Cattle_Y_T00206;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	gene	7569196	7569759	.	-	.	ID=Cattle_Y_G00135;Dbxref=GeneID:132344690;Name=LOC132344690;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344690;gene_biotype=protein_coding;partial=true;start_range=.,34773871;gene_id=Cattle_Y_G00135;source_id=gene-LOC132344690
haplotype2-0000357	CAT	mRNA	7569196	7569759	.	-	.	ID=Cattle_Y_T00207;Parent=Cattle_Y_G00135;Dbxref=GeneID:132344690,GenBank:XM_059884331.1;Name=XM_059884331.1;gbkey=mRNA;gene=LOC132344690;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 34%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,34773871;transcript_id=Cattle_Y_T00207;gene_id=Cattle_Y_G00135;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884331.1
haplotype2-0000357	CAT	exon	7569196	7569759	.	-	.	ID=Cattle_Y_E00253;Parent=Cattle_Y_T00207;Dbxref=GeneID:132344690,GenBank:XM_059884331.1;gbkey=mRNA;gene=LOC132344690;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,34773871;transcript_id=Cattle_Y_T00207;gene_id=Cattle_Y_G00135;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884331.1-1
haplotype2-0000357	CAT	CDS	7569196	7569759	.	-	0	ID=Cattle_Y_C00211;Parent=Cattle_Y_T00207;Dbxref=GeneID:132344690,GenBank:XP_059740314.1;Name=XP_059740314.1;gbkey=CDS;gene=LOC132344690;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740314.1_2;start_range=.,34773871;gene_id=Cattle_Y_G00135;transcript_id=Cattle_Y_T00207;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	7645902	7646476	.	+	.	ID=Cattle_Y_G00136;Dbxref=GeneID:132344660;Name=LOC132344660;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344660;gene_biotype=likely_pseudogene;partial=true;start_range=.,24728184;gene_id=Cattle_Y_G00136;source_id=gene-LOC132344660
haplotype2-0000357	CAT	mRNA	7645902	7646476	.	+	.	ID=Cattle_Y_T00208;Parent=Cattle_Y_G00136;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;Name=XM_059884305.1;gbkey=mRNA;gene=LOC132344660;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00208;gene_id=Cattle_Y_G00136;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884305.1
haplotype2-0000357	CAT	exon	7645902	7646027	.	+	.	ID=Cattle_Y_E00254;Parent=Cattle_Y_T00208;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00208;gene_id=Cattle_Y_G00136;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-1
haplotype2-0000357	CAT	exon	7646091	7646476	.	+	.	ID=Cattle_Y_E00255;Parent=Cattle_Y_T00208;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00208;gene_id=Cattle_Y_G00136;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-2
haplotype2-0000357	CAT	CDS	7646220	7646476	.	+	0	ID=Cattle_Y_C00212;Parent=Cattle_Y_T00208;Dbxref=GeneID:132344660,GenBank:XP_059740288.1;Name=XP_059740288.1;gbkey=CDS;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740288.1_1;start_range=.,24728184;gene_id=Cattle_Y_G00136;transcript_id=Cattle_Y_T00208;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	7679472	7679999	.	-	.	ID=Cattle_Y_G00137;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00137;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	7679472	7679999	.	-	.	ID=Cattle_Y_T00209;Parent=Cattle_Y_G00137;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00209;gene_id=Cattle_Y_G00137;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	7679472	7679803	.	-	.	ID=Cattle_Y_E00256;Parent=Cattle_Y_T00209;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00209;gene_id=Cattle_Y_G00137;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	exon	7679876	7679999	.	-	.	ID=Cattle_Y_E00257;Parent=Cattle_Y_T00209;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00209;gene_id=Cattle_Y_G00137;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	CDS	7679472	7679803	.	-	2	ID=Cattle_Y_C00213;Parent=Cattle_Y_T00209;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_18;gene_id=Cattle_Y_G00137;transcript_id=Cattle_Y_T00209;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	7679876	7679999	.	-	0	ID=Cattle_Y_C00214;Parent=Cattle_Y_T00209;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_18;gene_id=Cattle_Y_G00137;transcript_id=Cattle_Y_T00209;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	7684308	7695345	.	-	.	ID=Cattle_Y_G00138;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00138;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	7684308	7695345	.	-	.	ID=Cattle_Y_T00210;Parent=Cattle_Y_G00138;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00210;gene_id=Cattle_Y_G00138;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	7684308	7686115	.	-	.	ID=Cattle_Y_E00258;Parent=Cattle_Y_T00210;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00210;gene_id=Cattle_Y_G00138;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	exon	7695218	7695345	.	-	.	ID=Cattle_Y_E00259;Parent=Cattle_Y_T00210;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00210;gene_id=Cattle_Y_G00138;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	CDS	7684413	7686044	.	-	0	ID=Cattle_Y_C00215;Parent=Cattle_Y_T00210;gene_id=Cattle_Y_G00138;transcript_id=Cattle_Y_T00210;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	7701435	7702172	.	-	.	ID=Cattle_Y_G00139;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00139;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	7701435	7702172	.	-	.	ID=Cattle_Y_T00211;Parent=Cattle_Y_G00139;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00139;transcript_id=Cattle_Y_T00211;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	7732714	7734687	.	+	.	ID=Cattle_Y_G00140;Dbxref=GeneID:132344672;Name=LOC132344672;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344672;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00140;source_id=gene-LOC132344672
haplotype2-0000357	CAT	exon	7732714	7733096	.	+	.	ID=Cattle_Y_T00212;Parent=Cattle_Y_G00140;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00140;transcript_id=Cattle_Y_T00212;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-5
haplotype2-0000357	CAT	exon	7733880	7733955	.	+	.	ID=Cattle_Y_T00213;Parent=Cattle_Y_G00140;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00140;transcript_id=Cattle_Y_T00213;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-4
haplotype2-0000357	CAT	exon	7734139	7734252	.	+	.	ID=Cattle_Y_T00214;Parent=Cattle_Y_G00140;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00140;transcript_id=Cattle_Y_T00214;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-3
haplotype2-0000357	CAT	exon	7734348	7734493	.	+	.	ID=Cattle_Y_T00215;Parent=Cattle_Y_G00140;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00140;transcript_id=Cattle_Y_T00215;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-2
haplotype2-0000357	CAT	exon	7734610	7734687	.	+	.	ID=Cattle_Y_T00216;Parent=Cattle_Y_G00140;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00140;transcript_id=Cattle_Y_T00216;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672
haplotype2-0000357	CAT	gene	7743792	7774832	.	-	.	ID=Cattle_Y_G00141;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00141;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	7743792	7774832	.	-	.	ID=Cattle_Y_T00217;Parent=Cattle_Y_G00141;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00217;gene_id=Cattle_Y_G00141;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	7743792	7745613	.	-	.	ID=Cattle_Y_E00260;Parent=Cattle_Y_T00217;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00217;gene_id=Cattle_Y_G00141;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	exon	7774693	7774832	.	-	.	ID=Cattle_Y_E00261;Parent=Cattle_Y_T00217;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00217;gene_id=Cattle_Y_G00141;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	CDS	7743792	7745387	.	-	0	ID=Cattle_Y_C00216;Parent=Cattle_Y_T00217;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_4;gene_id=Cattle_Y_G00141;transcript_id=Cattle_Y_T00217;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	7876748	7878721	.	-	.	ID=Cattle_Y_G00142;Dbxref=GeneID:132344672;Name=LOC132344672;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344672;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00142;source_id=gene-LOC132344672
haplotype2-0000357	CAT	exon	7876748	7876825	.	-	.	ID=Cattle_Y_T00218;Parent=Cattle_Y_G00142;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00142;transcript_id=Cattle_Y_T00218;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672
haplotype2-0000357	CAT	exon	7876942	7877087	.	-	.	ID=Cattle_Y_T00219;Parent=Cattle_Y_G00142;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00142;transcript_id=Cattle_Y_T00219;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-2
haplotype2-0000357	CAT	exon	7877183	7877296	.	-	.	ID=Cattle_Y_T00220;Parent=Cattle_Y_G00142;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00142;transcript_id=Cattle_Y_T00220;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-3
haplotype2-0000357	CAT	exon	7877480	7877555	.	-	.	ID=Cattle_Y_T00221;Parent=Cattle_Y_G00142;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00142;transcript_id=Cattle_Y_T00221;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-4
haplotype2-0000357	CAT	exon	7878339	7878721	.	-	.	ID=Cattle_Y_T00222;Parent=Cattle_Y_G00142;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00142;transcript_id=Cattle_Y_T00222;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-5
haplotype2-0000357	CAT	gene	7909267	7910004	.	+	.	ID=Cattle_Y_G00143;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00143;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	7909267	7910004	.	+	.	ID=Cattle_Y_T00223;Parent=Cattle_Y_G00143;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00143;transcript_id=Cattle_Y_T00223;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	7916091	7927112	.	+	.	ID=Cattle_Y_G00144;Dbxref=GeneID:132344703;Name=LOC132344703;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344703;gene_biotype=protein_coding;gene_id=Cattle_Y_G00144;source_id=gene-LOC132344703
haplotype2-0000357	CAT	mRNA	7916091	7927112	.	+	.	ID=Cattle_Y_T00224;Parent=Cattle_Y_G00144;Dbxref=GeneID:132344703,GenBank:XM_059884345.1;Name=XM_059884345.1;gbkey=mRNA;gene=LOC132344703;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00224;gene_id=Cattle_Y_G00144;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884345.1
haplotype2-0000357	CAT	exon	7916091	7916241	.	+	.	ID=Cattle_Y_E00262;Parent=Cattle_Y_T00224;Dbxref=GeneID:132344703,GenBank:XM_059884345.1;gbkey=mRNA;gene=LOC132344703;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00224;gene_id=Cattle_Y_G00144;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884345.1-1
haplotype2-0000357	CAT	exon	7925314	7927112	.	+	.	ID=Cattle_Y_E00263;Parent=Cattle_Y_T00224;Dbxref=GeneID:132344703,GenBank:XM_059884345.1;gbkey=mRNA;gene=LOC132344703;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00224;gene_id=Cattle_Y_G00144;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884345.1-2
haplotype2-0000357	CAT	CDS	7925385	7927016	.	+	0	ID=Cattle_Y_C00217;Parent=Cattle_Y_T00224;gene_id=Cattle_Y_G00144;transcript_id=Cattle_Y_T00224;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	7946640	7957215	.	+	.	ID=Cattle_Y_G00145;Dbxref=GeneID:132344542;Name=LOC132344542;description=uncharacterized LOC132344542;gbkey=Gene;gene=LOC132344542;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00145;source_id=gene-LOC132344542
haplotype2-0000357	CAT	exon	7946640	7947032	.	+	.	ID=Cattle_Y_T00225;Parent=Cattle_Y_G00145;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00145;transcript_id=Cattle_Y_T00225;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542
haplotype2-0000357	CAT	exon	7954395	7954533	.	+	.	ID=Cattle_Y_T00226;Parent=Cattle_Y_G00145;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00145;transcript_id=Cattle_Y_T00226;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542-2
haplotype2-0000357	CAT	exon	7955242	7955357	.	+	.	ID=Cattle_Y_T00227;Parent=Cattle_Y_G00145;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00145;transcript_id=Cattle_Y_T00227;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542-3
haplotype2-0000357	CAT	exon	7957076	7957215	.	+	.	ID=Cattle_Y_T00228;Parent=Cattle_Y_G00145;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00145;transcript_id=Cattle_Y_T00228;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542-4
haplotype2-0000357	CAT	gene	8082070	8085055	.	+	.	ID=Cattle_Y_G00146;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00146;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	8221933	8224054	.	-	.	ID=Cattle_Y_G00147;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00147;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	8221933	8224054	.	-	.	ID=Cattle_Y_T00229;Parent=Cattle_Y_G00147;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00229;gene_id=Cattle_Y_G00147;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	8221933	8222010	.	-	.	ID=Cattle_Y_E00264;Parent=Cattle_Y_T00229;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00229;gene_id=Cattle_Y_G00147;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	8222127	8222272	.	-	.	ID=Cattle_Y_E00265;Parent=Cattle_Y_T00229;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00229;gene_id=Cattle_Y_G00147;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	8222368	8222481	.	-	.	ID=Cattle_Y_E00266;Parent=Cattle_Y_T00229;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00229;gene_id=Cattle_Y_G00147;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	8222665	8222740	.	-	.	ID=Cattle_Y_E00267;Parent=Cattle_Y_T00229;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00229;gene_id=Cattle_Y_G00147;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	8223514	8223908	.	-	.	ID=Cattle_Y_E00268;Parent=Cattle_Y_T00229;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00229;gene_id=Cattle_Y_G00147;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	8223991	8224054	.	-	.	ID=Cattle_Y_E00269;Parent=Cattle_Y_T00229;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00229;gene_id=Cattle_Y_G00147;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	8221933	8222010	.	-	0	ID=Cattle_Y_C00218;Parent=Cattle_Y_T00229;gene_id=Cattle_Y_G00147;transcript_id=Cattle_Y_T00229;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	8222127	8222272	.	-	2	ID=Cattle_Y_C00219;Parent=Cattle_Y_T00229;gene_id=Cattle_Y_G00147;transcript_id=Cattle_Y_T00229;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	8222368	8222481	.	-	2	ID=Cattle_Y_C00220;Parent=Cattle_Y_T00229;gene_id=Cattle_Y_G00147;transcript_id=Cattle_Y_T00229;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	8222665	8222740	.	-	0	ID=Cattle_Y_C00221;Parent=Cattle_Y_T00229;gene_id=Cattle_Y_G00147;transcript_id=Cattle_Y_T00229;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	8223514	8223908	.	-	2	ID=Cattle_Y_C00222;Parent=Cattle_Y_T00229;gene_id=Cattle_Y_G00147;transcript_id=Cattle_Y_T00229;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	8223991	8224054	.	-	0	ID=Cattle_Y_C00223;Parent=Cattle_Y_T00229;gene_id=Cattle_Y_G00147;transcript_id=Cattle_Y_T00229;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	8251963	8252700	.	+	.	ID=Cattle_Y_G00148;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00148;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	8251963	8252700	.	+	.	ID=Cattle_Y_T00230;Parent=Cattle_Y_G00148;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00148;transcript_id=Cattle_Y_T00230;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	8258803	8269849	.	+	.	ID=Cattle_Y_G00149;Dbxref=GeneID:132344704;Name=LOC132344704;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344704;gene_biotype=protein_coding;gene_id=Cattle_Y_G00149;source_id=gene-LOC132344704
haplotype2-0000357	CAT	mRNA	8258803	8269849	.	+	.	ID=Cattle_Y_T00231;Parent=Cattle_Y_G00149;Dbxref=GeneID:132344704,GenBank:XM_059884347.1;Name=XM_059884347.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344704;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=zinc finger protein 280B-like%2C transcript variant X1;transcript_id=Cattle_Y_T00231;gene_id=Cattle_Y_G00149;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884347.1
haplotype2-0000357	CAT	exon	8258803	8258937	.	+	.	ID=Cattle_Y_E00270;Parent=Cattle_Y_T00231;Dbxref=GeneID:132344704,GenBank:XM_059884347.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344704;product=zinc finger protein 280B-like, transcript variant X1;transcript_id=Cattle_Y_T00231;gene_id=Cattle_Y_G00149;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884347.1-1
haplotype2-0000357	CAT	exon	8268042	8269849	.	+	.	ID=Cattle_Y_E00271;Parent=Cattle_Y_T00231;Dbxref=GeneID:132344704,GenBank:XM_059884347.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344704;product=zinc finger protein 280B-like, transcript variant X1;transcript_id=Cattle_Y_T00231;gene_id=Cattle_Y_G00149;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884347.1-2
haplotype2-0000357	CAT	CDS	8268113	8269744	.	+	0	ID=Cattle_Y_C00224;Parent=Cattle_Y_T00231;gene_id=Cattle_Y_G00149;transcript_id=Cattle_Y_T00231;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	8258803	8269849	.	+	.	ID=Cattle_Y_T00232;Parent=Cattle_Y_G00149;Dbxref=GeneID:132344704,GenBank:XM_059884348.1;Name=XM_059884348.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344704;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=zinc finger protein 280B-like%2C transcript variant X2;transcript_id=Cattle_Y_T00232;gene_id=Cattle_Y_G00149;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884348.1
haplotype2-0000357	CAT	exon	8258803	8258895	.	+	.	ID=Cattle_Y_E00272;Parent=Cattle_Y_T00232;Dbxref=GeneID:132344704,GenBank:XM_059884348.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344704;product=zinc finger protein 280B-like, transcript variant X2;transcript_id=Cattle_Y_T00232;gene_id=Cattle_Y_G00149;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884348.1-1
haplotype2-0000357	CAT	exon	8268042	8269849	.	+	.	ID=Cattle_Y_E00273;Parent=Cattle_Y_T00232;Dbxref=GeneID:132344704,GenBank:XM_059884348.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344704;product=zinc finger protein 280B-like, transcript variant X2;transcript_id=Cattle_Y_T00232;gene_id=Cattle_Y_G00149;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884348.1-2
haplotype2-0000357	CAT	CDS	8268113	8269744	.	+	0	ID=Cattle_Y_C00225;Parent=Cattle_Y_T00232;gene_id=Cattle_Y_G00149;transcript_id=Cattle_Y_T00232;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	8274157	8274684	.	+	.	ID=Cattle_Y_G00150;Dbxref=GeneID:132344658;Name=LOC132344658;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344658;gene_biotype=protein_coding;gene_id=Cattle_Y_G00150;source_id=gene-LOC132344658
haplotype2-0000357	CAT	mRNA	8274157	8274684	.	+	.	ID=Cattle_Y_T00233;Parent=Cattle_Y_G00150;Dbxref=GeneID:132344658,GenBank:XM_059884303.1;Name=XM_059884303.1;gbkey=mRNA;gene=LOC132344658;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00233;gene_id=Cattle_Y_G00150;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884303.1
haplotype2-0000357	CAT	exon	8274157	8274280	.	+	.	ID=Cattle_Y_E00274;Parent=Cattle_Y_T00233;Dbxref=GeneID:132344658,GenBank:XM_059884303.1;gbkey=mRNA;gene=LOC132344658;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00233;gene_id=Cattle_Y_G00150;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884303.1-1
haplotype2-0000357	CAT	exon	8274353	8274684	.	+	.	ID=Cattle_Y_E00275;Parent=Cattle_Y_T00233;Dbxref=GeneID:132344658,GenBank:XM_059884303.1;gbkey=mRNA;gene=LOC132344658;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00233;gene_id=Cattle_Y_G00150;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884303.1-2
haplotype2-0000357	CAT	CDS	8274157	8274280	.	+	0	ID=Cattle_Y_C00226;Parent=Cattle_Y_T00233;Dbxref=GeneID:132344658,GenBank:XP_059740286.1;Name=XP_059740286.1;gbkey=CDS;gene=LOC132344658;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740286.1_1;gene_id=Cattle_Y_G00150;transcript_id=Cattle_Y_T00233;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	8274353	8274684	.	+	2	ID=Cattle_Y_C00227;Parent=Cattle_Y_T00233;Dbxref=GeneID:132344658,GenBank:XP_059740286.1;Name=XP_059740286.1;gbkey=CDS;gene=LOC132344658;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740286.1_1;gene_id=Cattle_Y_G00150;transcript_id=Cattle_Y_T00233;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	8384190	8386523	.	+	.	ID=Cattle_Y_G00151;Dbxref=GeneID:132344545;Name=LOC132344545;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344545;gene_biotype=protein_coding;gene_id=Cattle_Y_G00151;source_id=gene-LOC132344545
haplotype2-0000357	CAT	mRNA	8384190	8386523	.	+	.	ID=Cattle_Y_T00234;Parent=Cattle_Y_G00151;Dbxref=GeneID:132344545,GenBank:XM_059884231.1;Name=XM_059884231.1;gbkey=mRNA;gene=LOC132344545;model_evidence=Supporting evidence includes similarity to: 4 Proteins%2C and 48%25 coverage of the annotated genomic feature by RNAseq alignments;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00234;gene_id=Cattle_Y_G00151;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884231.1
haplotype2-0000357	CAT	exon	8384190	8384699	.	+	.	ID=Cattle_Y_E00276;Parent=Cattle_Y_T00234;Dbxref=GeneID:132344545,GenBank:XM_059884231.1;gbkey=mRNA;gene=LOC132344545;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00234;gene_id=Cattle_Y_G00151;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884231.1-1
haplotype2-0000357	CAT	exon	8385130	8385707	.	+	.	ID=Cattle_Y_E00277;Parent=Cattle_Y_T00234;Dbxref=GeneID:132344545,GenBank:XM_059884231.1;gbkey=mRNA;gene=LOC132344545;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00234;gene_id=Cattle_Y_G00151;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884231.1-1
haplotype2-0000357	CAT	exon	8386505	8386523	.	+	.	ID=Cattle_Y_E00278;Parent=Cattle_Y_T00234;Dbxref=GeneID:132344545,GenBank:XM_059884231.1;gbkey=mRNA;gene=LOC132344545;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00234;gene_id=Cattle_Y_G00151;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884231.1-3
haplotype2-0000357	CAT	CDS	8384190	8384699	.	+	0	ID=Cattle_Y_C00228;Parent=Cattle_Y_T00234;gene_id=Cattle_Y_G00151;transcript_id=Cattle_Y_T00234;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	8385130	8385707	.	+	0	ID=Cattle_Y_C00229;Parent=Cattle_Y_T00234;gene_id=Cattle_Y_G00151;transcript_id=Cattle_Y_T00234;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	8386505	8386523	.	+	1	ID=Cattle_Y_C00230;Parent=Cattle_Y_T00234;gene_id=Cattle_Y_G00151;transcript_id=Cattle_Y_T00234;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	8589698	8592693	.	-	.	ID=Cattle_Y_G00152;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00152;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	8684393	8684956	.	-	.	ID=Cattle_Y_G00153;Dbxref=GeneID:132344690;Name=LOC132344690;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344690;gene_biotype=protein_coding;partial=true;start_range=.,34773871;gene_id=Cattle_Y_G00153;source_id=gene-LOC132344690
haplotype2-0000357	CAT	mRNA	8684393	8684956	.	-	.	ID=Cattle_Y_T00235;Parent=Cattle_Y_G00153;Dbxref=GeneID:132344690,GenBank:XM_059884331.1;Name=XM_059884331.1;gbkey=mRNA;gene=LOC132344690;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 34%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,34773871;transcript_id=Cattle_Y_T00235;gene_id=Cattle_Y_G00153;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884331.1
haplotype2-0000357	CAT	exon	8684393	8684956	.	-	.	ID=Cattle_Y_E00279;Parent=Cattle_Y_T00235;Dbxref=GeneID:132344690,GenBank:XM_059884331.1;gbkey=mRNA;gene=LOC132344690;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,34773871;transcript_id=Cattle_Y_T00235;gene_id=Cattle_Y_G00153;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884331.1-1
haplotype2-0000357	CAT	CDS	8684393	8684956	.	-	0	ID=Cattle_Y_C00231;Parent=Cattle_Y_T00235;Dbxref=GeneID:132344690,GenBank:XP_059740314.1;Name=XP_059740314.1;gbkey=CDS;gene=LOC132344690;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740314.1_1;start_range=.,34773871;gene_id=Cattle_Y_G00153;transcript_id=Cattle_Y_T00235;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	8760703	8761277	.	+	.	ID=Cattle_Y_G00154;Dbxref=GeneID:132344660;Name=LOC132344660;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344660;gene_biotype=likely_pseudogene;partial=true;start_range=.,24728184;gene_id=Cattle_Y_G00154;source_id=gene-LOC132344660
haplotype2-0000357	CAT	mRNA	8760703	8761277	.	+	.	ID=Cattle_Y_T00236;Parent=Cattle_Y_G00154;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;Name=XM_059884305.1;gbkey=mRNA;gene=LOC132344660;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00236;gene_id=Cattle_Y_G00154;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884305.1
haplotype2-0000357	CAT	exon	8760703	8760828	.	+	.	ID=Cattle_Y_E00280;Parent=Cattle_Y_T00236;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00236;gene_id=Cattle_Y_G00154;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-1
haplotype2-0000357	CAT	exon	8760892	8761277	.	+	.	ID=Cattle_Y_E00281;Parent=Cattle_Y_T00236;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00236;gene_id=Cattle_Y_G00154;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-2
haplotype2-0000357	CAT	CDS	8761021	8761277	.	+	0	ID=Cattle_Y_C00232;Parent=Cattle_Y_T00236;Dbxref=GeneID:132344660,GenBank:XP_059740288.1;Name=XP_059740288.1;gbkey=CDS;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740288.1_12;start_range=.,24728184;gene_id=Cattle_Y_G00154;transcript_id=Cattle_Y_T00236;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	8794318	8794845	.	-	.	ID=Cattle_Y_G00155;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00155;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	8794318	8794845	.	-	.	ID=Cattle_Y_T00237;Parent=Cattle_Y_G00155;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00237;gene_id=Cattle_Y_G00155;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	8794318	8794649	.	-	.	ID=Cattle_Y_E00282;Parent=Cattle_Y_T00237;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00237;gene_id=Cattle_Y_G00155;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	exon	8794722	8794845	.	-	.	ID=Cattle_Y_E00283;Parent=Cattle_Y_T00237;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00237;gene_id=Cattle_Y_G00155;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	CDS	8794318	8794649	.	-	2	ID=Cattle_Y_C00233;Parent=Cattle_Y_T00237;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_35;gene_id=Cattle_Y_G00155;transcript_id=Cattle_Y_T00237;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	8794722	8794845	.	-	0	ID=Cattle_Y_C00234;Parent=Cattle_Y_T00237;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_35;gene_id=Cattle_Y_G00155;transcript_id=Cattle_Y_T00237;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	8799141	8810182	.	-	.	ID=Cattle_Y_G00156;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00156;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	8799141	8810182	.	-	.	ID=Cattle_Y_T00238;Parent=Cattle_Y_G00156;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00238;gene_id=Cattle_Y_G00156;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	8799141	8800948	.	-	.	ID=Cattle_Y_E00284;Parent=Cattle_Y_T00238;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00238;gene_id=Cattle_Y_G00156;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-2
haplotype2-0000357	CAT	exon	8810055	8810182	.	-	.	ID=Cattle_Y_E00285;Parent=Cattle_Y_T00238;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00238;gene_id=Cattle_Y_G00156;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	CDS	8799246	8800877	.	-	0	ID=Cattle_Y_C00235;Parent=Cattle_Y_T00238;Dbxref=GeneID:768254,GenBank:NP_001071588.1,BGD:BT17804;Name=NP_001071588.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ZNF280BY;inference=similar to AA sequence (same species):RefSeq:NP_001071588.1;product=zinc finger protein 280B;protein_id=NP_001071588.1_19;gene_id=Cattle_Y_G00156;transcript_id=Cattle_Y_T00238;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	8844803	8846930	.	+	.	ID=Cattle_Y_G00157;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00157;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	8844803	8846930	.	+	.	ID=Cattle_Y_T00239;Parent=Cattle_Y_G00157;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00239;gene_id=Cattle_Y_G00157;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	8844803	8844866	.	+	.	ID=Cattle_Y_E00286;Parent=Cattle_Y_T00239;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00239;gene_id=Cattle_Y_G00157;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	exon	8844949	8845343	.	+	.	ID=Cattle_Y_E00287;Parent=Cattle_Y_T00239;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00239;gene_id=Cattle_Y_G00157;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	8846123	8846198	.	+	.	ID=Cattle_Y_E00288;Parent=Cattle_Y_T00239;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00239;gene_id=Cattle_Y_G00157;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	8846382	8846495	.	+	.	ID=Cattle_Y_E00289;Parent=Cattle_Y_T00239;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00239;gene_id=Cattle_Y_G00157;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	8846591	8846736	.	+	.	ID=Cattle_Y_E00290;Parent=Cattle_Y_T00239;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00239;gene_id=Cattle_Y_G00157;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	8846853	8846930	.	+	.	ID=Cattle_Y_E00291;Parent=Cattle_Y_T00239;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00239;gene_id=Cattle_Y_G00157;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	CDS	8845071	8845343	.	+	0	ID=Cattle_Y_C00236;Parent=Cattle_Y_T00239;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_30;gene_id=Cattle_Y_G00157;transcript_id=Cattle_Y_T00239;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	8846123	8846198	.	+	0	ID=Cattle_Y_C00237;Parent=Cattle_Y_T00239;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_30;gene_id=Cattle_Y_G00157;transcript_id=Cattle_Y_T00239;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	8846382	8846495	.	+	2	ID=Cattle_Y_C00238;Parent=Cattle_Y_T00239;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_30;gene_id=Cattle_Y_G00157;transcript_id=Cattle_Y_T00239;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	8846591	8846736	.	+	2	ID=Cattle_Y_C00239;Parent=Cattle_Y_T00239;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_30;gene_id=Cattle_Y_G00157;transcript_id=Cattle_Y_T00239;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	8846853	8846930	.	+	0	ID=Cattle_Y_C00240;Parent=Cattle_Y_T00239;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_30;gene_id=Cattle_Y_G00157;transcript_id=Cattle_Y_T00239;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	8856017	8887055	.	-	.	ID=Cattle_Y_G00158;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00158;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	8856017	8887055	.	-	.	ID=Cattle_Y_T00240;Parent=Cattle_Y_G00158;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00240;gene_id=Cattle_Y_G00158;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	8856017	8857842	.	-	.	ID=Cattle_Y_E00292;Parent=Cattle_Y_T00240;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00240;gene_id=Cattle_Y_G00158;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	exon	8886916	8887055	.	-	.	ID=Cattle_Y_E00293;Parent=Cattle_Y_T00240;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00240;gene_id=Cattle_Y_G00158;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	CDS	8856017	8857615	.	-	0	ID=Cattle_Y_C00241;Parent=Cattle_Y_T00240;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_13;gene_id=Cattle_Y_G00158;transcript_id=Cattle_Y_T00240;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	8984324	8986474	.	-	.	ID=Cattle_Y_G00159;Dbxref=GeneID:132344655;Name=LOC132344655;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344655;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00159;source_id=gene-LOC132344655
haplotype2-0000357	CAT	exon	8984324	8984401	.	-	.	ID=Cattle_Y_T00241;Parent=Cattle_Y_G00159;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00159;transcript_id=Cattle_Y_T00241;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655
haplotype2-0000357	CAT	exon	8984518	8984663	.	-	.	ID=Cattle_Y_T00242;Parent=Cattle_Y_G00159;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00159;transcript_id=Cattle_Y_T00242;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-2
haplotype2-0000357	CAT	exon	8984759	8984870	.	-	.	ID=Cattle_Y_T00243;Parent=Cattle_Y_G00159;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00159;transcript_id=Cattle_Y_T00243;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-3
haplotype2-0000357	CAT	exon	8985054	8985131	.	-	.	ID=Cattle_Y_T00244;Parent=Cattle_Y_G00159;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00159;transcript_id=Cattle_Y_T00244;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-4
haplotype2-0000357	CAT	exon	8985925	8986319	.	-	.	ID=Cattle_Y_T00245;Parent=Cattle_Y_G00159;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00159;transcript_id=Cattle_Y_T00245;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-5
haplotype2-0000357	CAT	exon	8986402	8986474	.	-	.	ID=Cattle_Y_T00246;Parent=Cattle_Y_G00159;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00159;transcript_id=Cattle_Y_T00246;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-6
haplotype2-0000357	CAT	gene	9086033	9086755	.	+	.	ID=Cattle_Y_G00160;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00160;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	9130187	9130909	.	-	.	ID=Cattle_Y_G00161;Dbxref=GeneID:132344685;Name=LOC132344685;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344685;gene_biotype=protein_coding;partial=true;start_range=.,33040068;gene_id=Cattle_Y_G00161;source_id=gene-LOC132344685
haplotype2-0000357	CAT	mRNA	9130187	9130909	.	-	.	ID=Cattle_Y_T00247;Parent=Cattle_Y_G00161;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;Name=XM_059884326.1;gbkey=mRNA;gene=LOC132344685;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 42%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00247;gene_id=Cattle_Y_G00161;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884326.1
haplotype2-0000357	CAT	exon	9130187	9130909	.	-	.	ID=Cattle_Y_E00294;Parent=Cattle_Y_T00247;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;gbkey=mRNA;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00247;gene_id=Cattle_Y_G00161;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884326.1-1
haplotype2-0000357	CAT	CDS	9130187	9130789	.	-	0	ID=Cattle_Y_C00242;Parent=Cattle_Y_T00247;Dbxref=GeneID:132344685,GenBank:XP_059740309.1;Name=XP_059740309.1;gbkey=CDS;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740309.1_3;start_range=.,33040068;gene_id=Cattle_Y_G00161;transcript_id=Cattle_Y_T00247;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	9181588	9182310	.	-	.	ID=Cattle_Y_G00162;Dbxref=GeneID:132344685;Name=LOC132344685;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344685;gene_biotype=protein_coding;partial=true;start_range=.,33040068;gene_id=Cattle_Y_G00162;source_id=gene-LOC132344685
haplotype2-0000357	CAT	mRNA	9181588	9182310	.	-	.	ID=Cattle_Y_T00248;Parent=Cattle_Y_G00162;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;Name=XM_059884326.1;gbkey=mRNA;gene=LOC132344685;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 42%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00248;gene_id=Cattle_Y_G00162;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884326.1
haplotype2-0000357	CAT	exon	9181588	9182310	.	-	.	ID=Cattle_Y_E00295;Parent=Cattle_Y_T00248;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;gbkey=mRNA;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00248;gene_id=Cattle_Y_G00162;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884326.1-1
haplotype2-0000357	CAT	CDS	9181588	9182190	.	-	0	ID=Cattle_Y_C00243;Parent=Cattle_Y_T00248;Dbxref=GeneID:132344685,GenBank:XP_059740309.1;Name=XP_059740309.1;gbkey=CDS;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740309.1_7;start_range=.,33040068;gene_id=Cattle_Y_G00162;transcript_id=Cattle_Y_T00248;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	9188840	9189565	.	+	.	ID=Cattle_Y_G00163;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00163;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	9273618	9274340	.	+	.	ID=Cattle_Y_G00164;Dbxref=GeneID:132344685;Name=LOC132344685;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344685;gene_biotype=protein_coding;partial=true;start_range=.,33040068;gene_id=Cattle_Y_G00164;source_id=gene-LOC132344685
haplotype2-0000357	CAT	mRNA	9273618	9274340	.	+	.	ID=Cattle_Y_T00249;Parent=Cattle_Y_G00164;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;Name=XM_059884326.1;gbkey=mRNA;gene=LOC132344685;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 42%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00249;gene_id=Cattle_Y_G00164;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884326.1
haplotype2-0000357	CAT	exon	9273618	9274340	.	+	.	ID=Cattle_Y_E00296;Parent=Cattle_Y_T00249;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;gbkey=mRNA;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00249;gene_id=Cattle_Y_G00164;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884326.1-1
haplotype2-0000357	CAT	CDS	9273738	9274340	.	+	0	ID=Cattle_Y_C00244;Parent=Cattle_Y_T00249;Dbxref=GeneID:132344685,GenBank:XP_059740309.1;Name=XP_059740309.1;gbkey=CDS;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740309.1_10;start_range=.,33040068;gene_id=Cattle_Y_G00164;transcript_id=Cattle_Y_T00249;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	9317737	9318460	.	-	.	ID=Cattle_Y_G00165;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00165;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	9418168	9421155	.	+	.	ID=Cattle_Y_G00166;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00166;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	9517414	9548456	.	+	.	ID=Cattle_Y_G00167;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00167;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	9517414	9548456	.	+	.	ID=Cattle_Y_T00250;Parent=Cattle_Y_G00167;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00250;gene_id=Cattle_Y_G00167;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	9517414	9517553	.	+	.	ID=Cattle_Y_E00297;Parent=Cattle_Y_T00250;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00250;gene_id=Cattle_Y_G00167;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	9546626	9548456	.	+	.	ID=Cattle_Y_E00298;Parent=Cattle_Y_T00250;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00250;gene_id=Cattle_Y_G00167;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	9547907	9548456	.	+	0	ID=Cattle_Y_C00245;Parent=Cattle_Y_T00250;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_11;gene_id=Cattle_Y_G00167;transcript_id=Cattle_Y_T00250;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	9557557	9616874	.	-	.	ID=Cattle_Y_G00168;Dbxref=GeneID:132344710;Name=LOC132344710;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344710;gene_biotype=protein_coding;gene_id=Cattle_Y_G00168;source_id=gene-LOC132344710
haplotype2-0000357	CAT	mRNA	9557557	9616874	.	-	.	ID=Cattle_Y_T00251;Parent=Cattle_Y_G00168;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;Name=XM_059884354.1;gbkey=mRNA;gene=LOC132344710;model_evidence=Supporting evidence includes similarity to: 3 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00251;gene_id=Cattle_Y_G00168;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884354.1
haplotype2-0000357	CAT	exon	9557557	9557634	.	-	.	ID=Cattle_Y_E00299;Parent=Cattle_Y_T00251;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;gbkey=mRNA;gene=LOC132344710;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00251;gene_id=Cattle_Y_G00168;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884354.1-6
haplotype2-0000357	CAT	exon	9557751	9557896	.	-	.	ID=Cattle_Y_E00300;Parent=Cattle_Y_T00251;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;gbkey=mRNA;gene=LOC132344710;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00251;gene_id=Cattle_Y_G00168;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884354.1-6
haplotype2-0000357	CAT	exon	9557992	9558105	.	-	.	ID=Cattle_Y_E00301;Parent=Cattle_Y_T00251;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;gbkey=mRNA;gene=LOC132344710;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00251;gene_id=Cattle_Y_G00168;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884354.1-6
haplotype2-0000357	CAT	exon	9558289	9558364	.	-	.	ID=Cattle_Y_E00302;Parent=Cattle_Y_T00251;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;gbkey=mRNA;gene=LOC132344710;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00251;gene_id=Cattle_Y_G00168;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884354.1-6
haplotype2-0000357	CAT	exon	9559138	9559532	.	-	.	ID=Cattle_Y_E00303;Parent=Cattle_Y_T00251;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;gbkey=mRNA;gene=LOC132344710;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00251;gene_id=Cattle_Y_G00168;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884354.1-6
haplotype2-0000357	CAT	exon	9616751	9616874	.	-	.	ID=Cattle_Y_E00304;Parent=Cattle_Y_T00251;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;gbkey=mRNA;gene=LOC132344710;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00251;gene_id=Cattle_Y_G00168;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884354.1-1
haplotype2-0000357	CAT	CDS	9557557	9557634	.	-	0	ID=Cattle_Y_C00246;Parent=Cattle_Y_T00251;gene_id=Cattle_Y_G00168;transcript_id=Cattle_Y_T00251;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	9557751	9557896	.	-	2	ID=Cattle_Y_C00247;Parent=Cattle_Y_T00251;gene_id=Cattle_Y_G00168;transcript_id=Cattle_Y_T00251;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	9557992	9558105	.	-	2	ID=Cattle_Y_C00248;Parent=Cattle_Y_T00251;gene_id=Cattle_Y_G00168;transcript_id=Cattle_Y_T00251;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	9558289	9558364	.	-	0	ID=Cattle_Y_C00249;Parent=Cattle_Y_T00251;gene_id=Cattle_Y_G00168;transcript_id=Cattle_Y_T00251;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	9559138	9559532	.	-	2	ID=Cattle_Y_C00250;Parent=Cattle_Y_T00251;gene_id=Cattle_Y_G00168;transcript_id=Cattle_Y_T00251;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	9616751	9616874	.	-	0	ID=Cattle_Y_C00251;Parent=Cattle_Y_T00251;gene_id=Cattle_Y_G00168;transcript_id=Cattle_Y_T00251;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	9587603	9588340	.	+	.	ID=Cattle_Y_G00169;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00169;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	9587603	9588340	.	+	.	ID=Cattle_Y_T00252;Parent=Cattle_Y_G00169;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00169;transcript_id=Cattle_Y_T00252;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	9603687	9605531	.	+	.	ID=Cattle_Y_G00170;Dbxref=GeneID:132344680;Name=LOC132344680;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344680;gene_biotype=protein_coding;gene_id=Cattle_Y_G00170;source_id=gene-LOC132344680
haplotype2-0000357	CAT	mRNA	9603687	9605531	.	+	.	ID=Cattle_Y_T00253;Parent=Cattle_Y_G00170;Dbxref=GeneID:132344680,GenBank:XM_059884320.1;Name=XM_059884320.1;gbkey=mRNA;gene=LOC132344680;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 99%25 coverage of the annotated genomic feature by RNAseq alignments;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00253;gene_id=Cattle_Y_G00170;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884320.1
haplotype2-0000357	CAT	exon	9603687	9605531	.	+	.	ID=Cattle_Y_E00305;Parent=Cattle_Y_T00253;Dbxref=GeneID:132344680,GenBank:XM_059884320.1;gbkey=mRNA;gene=LOC132344680;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00253;gene_id=Cattle_Y_G00170;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884320.1-1
haplotype2-0000357	CAT	CDS	9603754	9605385	.	+	0	ID=Cattle_Y_C00252;Parent=Cattle_Y_T00253;gene_id=Cattle_Y_G00170;transcript_id=Cattle_Y_T00253;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	9624889	9634069	.	+	.	ID=Cattle_Y_G00171;Dbxref=GeneID:132344546;Name=LOC132344546;description=uncharacterized LOC132344546;gbkey=Gene;gene=LOC132344546;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00171;source_id=gene-LOC132344546
haplotype2-0000357	CAT	exon	9624889	9625281	.	+	.	ID=Cattle_Y_T00254;Parent=Cattle_Y_G00171;Dbxref=GeneID:132344546;gbkey=exon;gene=LOC132344546;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00171;transcript_id=Cattle_Y_T00254;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344546-4
haplotype2-0000357	CAT	exon	9632610	9632748	.	+	.	ID=Cattle_Y_T00255;Parent=Cattle_Y_G00171;Dbxref=GeneID:132344546;gbkey=exon;gene=LOC132344546;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00171;transcript_id=Cattle_Y_T00255;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344546-3
haplotype2-0000357	CAT	exon	9633453	9633579	.	+	.	ID=Cattle_Y_T00256;Parent=Cattle_Y_G00171;Dbxref=GeneID:132344546;gbkey=exon;gene=LOC132344546;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00171;transcript_id=Cattle_Y_T00256;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344546-2
haplotype2-0000357	CAT	exon	9634022	9634069	.	+	.	ID=Cattle_Y_T00257;Parent=Cattle_Y_G00171;Dbxref=GeneID:132344546;gbkey=exon;gene=LOC132344546;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00171;transcript_id=Cattle_Y_T00257;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344546
haplotype2-0000357	CAT	gene	9759671	9762658	.	+	.	ID=Cattle_Y_G00172;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00172;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	9858862	9889874	.	+	.	ID=Cattle_Y_G00173;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00173;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	9858862	9889874	.	+	.	ID=Cattle_Y_T00258;Parent=Cattle_Y_G00173;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00258;gene_id=Cattle_Y_G00173;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	9858862	9859001	.	+	.	ID=Cattle_Y_E00306;Parent=Cattle_Y_T00258;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00258;gene_id=Cattle_Y_G00173;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	9888037	9889874	.	+	.	ID=Cattle_Y_E00307;Parent=Cattle_Y_T00258;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00258;gene_id=Cattle_Y_G00173;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	9888264	9889874	.	+	0	ID=Cattle_Y_C00253;Parent=Cattle_Y_T00258;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_48;gene_id=Cattle_Y_G00173;transcript_id=Cattle_Y_T00258;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	9898975	9900896	.	-	.	ID=Cattle_Y_G00174;Dbxref=GeneID:132344659;Name=LOC132344659;description=testis-specific Y-encoded protein 1-like;end_range=24663580,.;gbkey=Gene;gene=LOC132344659;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00174;source_id=gene-LOC132344659
haplotype2-0000357	CAT	mRNA	9898975	9900896	.	-	.	ID=Cattle_Y_T00259;Parent=Cattle_Y_G00174;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;Name=XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00259;gene_id=Cattle_Y_G00174;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884304.1
haplotype2-0000357	CAT	exon	9898975	9899052	.	-	.	ID=Cattle_Y_E00308;Parent=Cattle_Y_T00259;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00259;gene_id=Cattle_Y_G00174;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-5
haplotype2-0000357	CAT	exon	9899169	9899314	.	-	.	ID=Cattle_Y_E00309;Parent=Cattle_Y_T00259;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00259;gene_id=Cattle_Y_G00174;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-4
haplotype2-0000357	CAT	exon	9899410	9899523	.	-	.	ID=Cattle_Y_E00310;Parent=Cattle_Y_T00259;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00259;gene_id=Cattle_Y_G00174;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-3
haplotype2-0000357	CAT	exon	9899707	9899782	.	-	.	ID=Cattle_Y_E00311;Parent=Cattle_Y_T00259;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00259;gene_id=Cattle_Y_G00174;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-2
haplotype2-0000357	CAT	exon	9900558	9900896	.	-	.	ID=Cattle_Y_E00312;Parent=Cattle_Y_T00259;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00259;gene_id=Cattle_Y_G00174;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-1
haplotype2-0000357	CAT	CDS	9898975	9899052	.	-	0	ID=Cattle_Y_C00254;Parent=Cattle_Y_T00259;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_3;gene_id=Cattle_Y_G00174;transcript_id=Cattle_Y_T00259;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	9899169	9899314	.	-	2	ID=Cattle_Y_C00255;Parent=Cattle_Y_T00259;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_3;gene_id=Cattle_Y_G00174;transcript_id=Cattle_Y_T00259;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	9899410	9899523	.	-	2	ID=Cattle_Y_C00256;Parent=Cattle_Y_T00259;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_3;gene_id=Cattle_Y_G00174;transcript_id=Cattle_Y_T00259;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	9899707	9899782	.	-	0	ID=Cattle_Y_C00257;Parent=Cattle_Y_T00259;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_3;gene_id=Cattle_Y_G00174;transcript_id=Cattle_Y_T00259;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	9900558	9900896	.	-	0	ID=Cattle_Y_C00258;Parent=Cattle_Y_T00259;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;end_range=24663580,.;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_3;gene_id=Cattle_Y_G00174;transcript_id=Cattle_Y_T00259;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	9931298	9942378	.	+	.	ID=Cattle_Y_G00175;Dbxref=GeneID:132344526;Name=LOC132344526;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344526;gene_biotype=protein_coding;gene_id=Cattle_Y_G00175;source_id=gene-LOC132344526
haplotype2-0000357	CAT	mRNA	9931298	9942378	.	+	.	ID=Cattle_Y_T00260;Parent=Cattle_Y_G00175;Dbxref=GeneID:132344526,GenBank:XM_059884212.1;Name=XM_059884212.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344526;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=zinc finger protein 280B-like%2C transcript variant X1;transcript_id=Cattle_Y_T00260;gene_id=Cattle_Y_G00175;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884212.1
haplotype2-0000357	CAT	exon	9931298	9931464	.	+	.	ID=Cattle_Y_E00313;Parent=Cattle_Y_T00260;Dbxref=GeneID:132344526,GenBank:XM_059884212.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344526;product=zinc finger protein 280B-like, transcript variant X1;transcript_id=Cattle_Y_T00260;gene_id=Cattle_Y_G00175;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884212.1-1
haplotype2-0000357	CAT	exon	9940571	9942378	.	+	.	ID=Cattle_Y_E00314;Parent=Cattle_Y_T00260;Dbxref=GeneID:132344526,GenBank:XM_059884212.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344526;product=zinc finger protein 280B-like, transcript variant X1;transcript_id=Cattle_Y_T00260;gene_id=Cattle_Y_G00175;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884212.1-2
haplotype2-0000357	CAT	CDS	9940642	9942273	.	+	0	ID=Cattle_Y_C00259;Parent=Cattle_Y_T00260;Dbxref=GeneID:132344526,GenBank:XP_059740195.1;Name=XP_059740195.1;gbkey=CDS;gene=LOC132344526;product=zinc finger protein 280B-like;protein_id=XP_059740195.1;gene_id=Cattle_Y_G00175;transcript_id=Cattle_Y_T00260;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	9931298	9942378	.	+	.	ID=Cattle_Y_T00261;Parent=Cattle_Y_G00175;Dbxref=GeneID:132344526,GenBank:XM_059884213.1;Name=XM_059884213.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344526;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=zinc finger protein 280B-like%2C transcript variant X2;transcript_id=Cattle_Y_T00261;gene_id=Cattle_Y_G00175;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884213.1
haplotype2-0000357	CAT	exon	9931298	9931422	.	+	.	ID=Cattle_Y_E00315;Parent=Cattle_Y_T00261;Dbxref=GeneID:132344526,GenBank:XM_059884213.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344526;product=zinc finger protein 280B-like, transcript variant X2;transcript_id=Cattle_Y_T00261;gene_id=Cattle_Y_G00175;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884213.1-1
haplotype2-0000357	CAT	exon	9940571	9942378	.	+	.	ID=Cattle_Y_E00316;Parent=Cattle_Y_T00261;Dbxref=GeneID:132344526,GenBank:XM_059884213.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344526;product=zinc finger protein 280B-like, transcript variant X2;transcript_id=Cattle_Y_T00261;gene_id=Cattle_Y_G00175;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884213.1-2
haplotype2-0000357	CAT	CDS	9940642	9942273	.	+	0	ID=Cattle_Y_C00260;Parent=Cattle_Y_T00261;Dbxref=GeneID:132344526,GenBank:XP_059740196.1;Name=XP_059740196.1;gbkey=CDS;gene=LOC132344526;product=zinc finger protein 280B-like;protein_id=XP_059740196.1;gene_id=Cattle_Y_G00175;transcript_id=Cattle_Y_T00261;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	9946691	9947218	.	+	.	ID=Cattle_Y_G00176;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00176;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	9946691	9947218	.	+	.	ID=Cattle_Y_T00262;Parent=Cattle_Y_G00176;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00262;gene_id=Cattle_Y_G00176;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	9946691	9946814	.	+	.	ID=Cattle_Y_E00317;Parent=Cattle_Y_T00262;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00262;gene_id=Cattle_Y_G00176;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	9946887	9947218	.	+	.	ID=Cattle_Y_E00318;Parent=Cattle_Y_T00262;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00262;gene_id=Cattle_Y_G00176;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	9946691	9946814	.	+	0	ID=Cattle_Y_C00261;Parent=Cattle_Y_T00262;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_24;gene_id=Cattle_Y_G00176;transcript_id=Cattle_Y_T00262;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	9946887	9947218	.	+	2	ID=Cattle_Y_C00262;Parent=Cattle_Y_T00262;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_24;gene_id=Cattle_Y_G00176;transcript_id=Cattle_Y_T00262;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	10009855	10011612	.	-	.	ID=Cattle_Y_G00177;Dbxref=GeneID:132344677;Name=LOC132344677;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344677;gene_biotype=protein_coding;gene_id=Cattle_Y_G00177;source_id=gene-LOC132344677
haplotype2-0000357	CAT	mRNA	10009855	10011612	.	-	.	ID=Cattle_Y_T00263;Parent=Cattle_Y_G00177;Dbxref=GeneID:132344677,GenBank:XM_059884317.1;Name=XM_059884317.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344677;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 68%25 coverage of the annotated genomic feature by RNAseq alignments;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00263;gene_id=Cattle_Y_G00177;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884317.1
haplotype2-0000357	CAT	exon	10009855	10010672	.	-	.	ID=Cattle_Y_E00319;Parent=Cattle_Y_T00263;Dbxref=GeneID:132344677,GenBank:XM_059884317.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344677;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00263;gene_id=Cattle_Y_G00177;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884317.1-2
haplotype2-0000357	CAT	exon	10011103	10011612	.	-	.	ID=Cattle_Y_E00320;Parent=Cattle_Y_T00263;Dbxref=GeneID:132344677,GenBank:XM_059884317.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344677;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00263;gene_id=Cattle_Y_G00177;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884317.1-1
haplotype2-0000357	CAT	CDS	10009929	10010672	.	-	0	ID=Cattle_Y_C00263;Parent=Cattle_Y_T00263;gene_id=Cattle_Y_G00177;transcript_id=Cattle_Y_T00263;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	10011103	10011612	.	-	0	ID=Cattle_Y_C00264;Parent=Cattle_Y_T00263;gene_id=Cattle_Y_G00177;transcript_id=Cattle_Y_T00263;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	10095812	10096534	.	-	.	ID=Cattle_Y_G00178;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00178;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	10194974	10197961	.	+	.	ID=Cattle_Y_G00179;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00179;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	10294164	10325170	.	+	.	ID=Cattle_Y_G00180;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00180;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	10294164	10325170	.	+	.	ID=Cattle_Y_T00264;Parent=Cattle_Y_G00180;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00264;gene_id=Cattle_Y_G00180;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	10294164	10294303	.	+	.	ID=Cattle_Y_E00321;Parent=Cattle_Y_T00264;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00264;gene_id=Cattle_Y_G00180;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	10323345	10325170	.	+	.	ID=Cattle_Y_E00322;Parent=Cattle_Y_T00264;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00264;gene_id=Cattle_Y_G00180;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	10323572	10325170	.	+	0	ID=Cattle_Y_C00265;Parent=Cattle_Y_T00264;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_18;gene_id=Cattle_Y_G00180;transcript_id=Cattle_Y_T00264;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	10334264	10336387	.	-	.	ID=Cattle_Y_G00181;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00181;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	10334264	10336387	.	-	.	ID=Cattle_Y_T00265;Parent=Cattle_Y_G00181;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00265;gene_id=Cattle_Y_G00181;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	10334264	10334341	.	-	.	ID=Cattle_Y_E00323;Parent=Cattle_Y_T00265;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00265;gene_id=Cattle_Y_G00181;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	10334458	10334603	.	-	.	ID=Cattle_Y_E00324;Parent=Cattle_Y_T00265;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00265;gene_id=Cattle_Y_G00181;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	10334699	10334812	.	-	.	ID=Cattle_Y_E00325;Parent=Cattle_Y_T00265;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00265;gene_id=Cattle_Y_G00181;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	10334996	10335071	.	-	.	ID=Cattle_Y_E00326;Parent=Cattle_Y_T00265;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00265;gene_id=Cattle_Y_G00181;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	10335847	10336241	.	-	.	ID=Cattle_Y_E00327;Parent=Cattle_Y_T00265;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00265;gene_id=Cattle_Y_G00181;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	10336324	10336387	.	-	.	ID=Cattle_Y_E00328;Parent=Cattle_Y_T00265;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00265;gene_id=Cattle_Y_G00181;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	10334264	10334341	.	-	0	ID=Cattle_Y_C00266;Parent=Cattle_Y_T00265;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_35;gene_id=Cattle_Y_G00181;transcript_id=Cattle_Y_T00265;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	10334458	10334603	.	-	2	ID=Cattle_Y_C00267;Parent=Cattle_Y_T00265;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_35;gene_id=Cattle_Y_G00181;transcript_id=Cattle_Y_T00265;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	10334699	10334812	.	-	2	ID=Cattle_Y_C00268;Parent=Cattle_Y_T00265;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_35;gene_id=Cattle_Y_G00181;transcript_id=Cattle_Y_T00265;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	10334996	10335071	.	-	0	ID=Cattle_Y_C00269;Parent=Cattle_Y_T00265;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_35;gene_id=Cattle_Y_G00181;transcript_id=Cattle_Y_T00265;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	10335847	10336236	.	-	0	ID=Cattle_Y_C00270;Parent=Cattle_Y_T00265;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_35;gene_id=Cattle_Y_G00181;transcript_id=Cattle_Y_T00265;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	10363871	10364608	.	+	.	ID=Cattle_Y_G00182;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00182;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	10363871	10364608	.	+	.	ID=Cattle_Y_T00266;Parent=Cattle_Y_G00182;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00182;transcript_id=Cattle_Y_T00266;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	10370698	10381746	.	+	.	ID=Cattle_Y_G00183;Dbxref=GeneID:132344712;Name=LOC132344712;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344712;gene_biotype=protein_coding;gene_id=Cattle_Y_G00183;source_id=gene-LOC132344712
haplotype2-0000357	CAT	mRNA	10370698	10381746	.	+	.	ID=Cattle_Y_T00267;Parent=Cattle_Y_G00183;Dbxref=GeneID:132344712,GenBank:XM_059884356.1;Name=XM_059884356.1;gbkey=mRNA;gene=LOC132344712;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00267;gene_id=Cattle_Y_G00183;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884356.1
haplotype2-0000357	CAT	exon	10370698	10370807	.	+	.	ID=Cattle_Y_E00329;Parent=Cattle_Y_T00267;Dbxref=GeneID:132344712,GenBank:XM_059884356.1;gbkey=mRNA;gene=LOC132344712;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00267;gene_id=Cattle_Y_G00183;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884356.1-1
haplotype2-0000357	CAT	exon	10379938	10381746	.	+	.	ID=Cattle_Y_E00330;Parent=Cattle_Y_T00267;Dbxref=GeneID:132344712,GenBank:XM_059884356.1;gbkey=mRNA;gene=LOC132344712;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00267;gene_id=Cattle_Y_G00183;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884356.1-2
haplotype2-0000357	CAT	CDS	10380009	10381640	.	+	0	ID=Cattle_Y_C00271;Parent=Cattle_Y_T00267;gene_id=Cattle_Y_G00183;transcript_id=Cattle_Y_T00267;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	10412346	10412887	.	-	.	ID=Cattle_Y_G00184;Dbxref=GeneID:132344657;Name=LOC132344657;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344657;gene_biotype=protein_coding;gene_id=Cattle_Y_G00184;source_id=gene-LOC132344657
haplotype2-0000357	CAT	mRNA	10412346	10412887	.	-	.	ID=Cattle_Y_T00268;Parent=Cattle_Y_G00184;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;Name=XM_059884302.1;gbkey=mRNA;gene=LOC132344657;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00268;gene_id=Cattle_Y_G00184;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884302.1
haplotype2-0000357	CAT	exon	10412346	10412698	.	-	.	ID=Cattle_Y_E00331;Parent=Cattle_Y_T00268;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00268;gene_id=Cattle_Y_G00184;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884302.1-2
haplotype2-0000357	CAT	exon	10412762	10412887	.	-	.	ID=Cattle_Y_E00332;Parent=Cattle_Y_T00268;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00268;gene_id=Cattle_Y_G00184;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884302.1-1
haplotype2-0000357	CAT	CDS	10412444	10412698	.	-	0	ID=Cattle_Y_C00272;Parent=Cattle_Y_T00268;Dbxref=GeneID:132344657,GenBank:XP_059740285.1;Name=XP_059740285.1;gbkey=CDS;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740285.1_6;gene_id=Cattle_Y_G00184;transcript_id=Cattle_Y_T00268;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	10412762	10412887	.	-	0	ID=Cattle_Y_C00273;Parent=Cattle_Y_T00268;Dbxref=GeneID:132344657,GenBank:XP_059740285.1;Name=XP_059740285.1;gbkey=CDS;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740285.1_6;gene_id=Cattle_Y_G00184;transcript_id=Cattle_Y_T00268;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	10488650	10490599	.	+	.	ID=Cattle_Y_G00185;Dbxref=GeneID:132344713;Name=LOC132344713;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344713;gene_biotype=protein_coding;gene_id=Cattle_Y_G00185;source_id=gene-LOC132344713
haplotype2-0000357	CAT	mRNA	10488650	10490599	.	+	.	ID=Cattle_Y_T00269;Parent=Cattle_Y_G00185;Dbxref=GeneID:132344713,GenBank:XM_059884357.1;Name=XM_059884357.1;gbkey=mRNA;gene=LOC132344713;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00269;gene_id=Cattle_Y_G00185;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884357.1
haplotype2-0000357	CAT	exon	10488650	10489194	.	+	.	ID=Cattle_Y_E00333;Parent=Cattle_Y_T00269;Dbxref=GeneID:132344713,GenBank:XM_059884357.1;gbkey=mRNA;gene=LOC132344713;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00269;gene_id=Cattle_Y_G00185;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884357.1-1
haplotype2-0000357	CAT	exon	10489625	10490599	.	+	.	ID=Cattle_Y_E00334;Parent=Cattle_Y_T00269;Dbxref=GeneID:132344713,GenBank:XM_059884357.1;gbkey=mRNA;gene=LOC132344713;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00269;gene_id=Cattle_Y_G00185;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884357.1-2
haplotype2-0000357	CAT	CDS	10488685	10489194	.	+	0	ID=Cattle_Y_C00274;Parent=Cattle_Y_T00269;Dbxref=GeneID:132344713,GenBank:XP_059740340.1;Name=XP_059740340.1;gbkey=CDS;gene=LOC132344713;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740340.1_1;gene_id=Cattle_Y_G00185;transcript_id=Cattle_Y_T00269;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	10489625	10490359	.	+	0	ID=Cattle_Y_C00275;Parent=Cattle_Y_T00269;Dbxref=GeneID:132344713,GenBank:XP_059740340.1;Name=XP_059740340.1;gbkey=CDS;gene=LOC132344713;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740340.1_1;gene_id=Cattle_Y_G00185;transcript_id=Cattle_Y_T00269;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	10695833	10697364	.	+	.	ID=Cattle_Y_G00186;Dbxref=GeneID:132344714;Name=LOC132344714;description=heat shock transcription factor%2C Y-linked-like;end_range=57053758,.;gbkey=Gene;gene=LOC132344714;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00186;source_id=gene-LOC132344714
haplotype2-0000357	CAT	mRNA	10695833	10697364	.	+	.	ID=Cattle_Y_T00270;Parent=Cattle_Y_G00186;Dbxref=GeneID:132344714,GenBank:XM_059884358.1;Name=XM_059884358.1;end_range=57053758,.;gbkey=mRNA;gene=LOC132344714;model_evidence=Supporting evidence includes similarity to: 5 Proteins%2C and 97%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;partial=true;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00270;gene_id=Cattle_Y_G00186;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884358.1
haplotype2-0000357	CAT	exon	10695833	10696409	.	+	.	ID=Cattle_Y_E00335;Parent=Cattle_Y_T00270;Dbxref=GeneID:132344714,GenBank:XM_059884358.1;gbkey=mRNA;gene=LOC132344714;partial=true;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00270;gene_id=Cattle_Y_G00186;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884358.1-1
haplotype2-0000357	CAT	exon	10696840	10697364	.	+	.	ID=Cattle_Y_E00336;Parent=Cattle_Y_T00270;Dbxref=GeneID:132344714,GenBank:XM_059884358.1;end_range=57053758,.;gbkey=mRNA;gene=LOC132344714;partial=true;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00270;gene_id=Cattle_Y_G00186;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884358.1-2
haplotype2-0000357	CAT	CDS	10695900	10696409	.	+	0	ID=Cattle_Y_C00276;Parent=Cattle_Y_T00270;Dbxref=GeneID:132344714,GenBank:XP_059740341.1;Name=XP_059740341.1;gbkey=CDS;gene=LOC132344714;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740341.1_1;gene_id=Cattle_Y_G00186;transcript_id=Cattle_Y_T00270;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	10696840	10697364	.	+	0	ID=Cattle_Y_C00277;Parent=Cattle_Y_T00270;Dbxref=GeneID:132344714,GenBank:XP_059740341.1;Name=XP_059740341.1;end_range=57053758,.;gbkey=CDS;gene=LOC132344714;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740341.1_1;gene_id=Cattle_Y_G00186;transcript_id=Cattle_Y_T00270;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	10779815	10781346	.	+	.	ID=Cattle_Y_G00187;Dbxref=GeneID:132344714;Name=LOC132344714;description=heat shock transcription factor%2C Y-linked-like;end_range=57053758,.;gbkey=Gene;gene=LOC132344714;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00187;source_id=gene-LOC132344714
haplotype2-0000357	CAT	mRNA	10779815	10781346	.	+	.	ID=Cattle_Y_T00271;Parent=Cattle_Y_G00187;Dbxref=GeneID:132344714,GenBank:XM_059884358.1;Name=XM_059884358.1;end_range=57053758,.;gbkey=mRNA;gene=LOC132344714;model_evidence=Supporting evidence includes similarity to: 5 Proteins%2C and 97%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;partial=true;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00271;gene_id=Cattle_Y_G00187;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884358.1
haplotype2-0000357	CAT	exon	10779815	10780391	.	+	.	ID=Cattle_Y_E00337;Parent=Cattle_Y_T00271;Dbxref=GeneID:132344714,GenBank:XM_059884358.1;gbkey=mRNA;gene=LOC132344714;partial=true;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00271;gene_id=Cattle_Y_G00187;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884358.1-1
haplotype2-0000357	CAT	exon	10780822	10781346	.	+	.	ID=Cattle_Y_E00338;Parent=Cattle_Y_T00271;Dbxref=GeneID:132344714,GenBank:XM_059884358.1;end_range=57053758,.;gbkey=mRNA;gene=LOC132344714;partial=true;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00271;gene_id=Cattle_Y_G00187;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884358.1-2
haplotype2-0000357	CAT	CDS	10779882	10780391	.	+	0	ID=Cattle_Y_C00278;Parent=Cattle_Y_T00271;Dbxref=GeneID:132344714,GenBank:XP_059740341.1;Name=XP_059740341.1;gbkey=CDS;gene=LOC132344714;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740341.1_2;gene_id=Cattle_Y_G00187;transcript_id=Cattle_Y_T00271;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	10780822	10781346	.	+	0	ID=Cattle_Y_C00279;Parent=Cattle_Y_T00271;Dbxref=GeneID:132344714,GenBank:XP_059740341.1;Name=XP_059740341.1;end_range=57053758,.;gbkey=CDS;gene=LOC132344714;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740341.1_2;gene_id=Cattle_Y_G00187;transcript_id=Cattle_Y_T00271;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	10878533	10881527	.	+	.	ID=Cattle_Y_G00188;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00188;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	10956019	10957767	.	-	.	ID=Cattle_Y_G00189;Dbxref=GeneID:132344670;Name=LOC132344670;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344670;gene_biotype=protein_coding;gene_id=Cattle_Y_G00189;source_id=gene-LOC132344670
haplotype2-0000357	CAT	mRNA	10956019	10957767	.	-	.	ID=Cattle_Y_T00272;Parent=Cattle_Y_G00189;Dbxref=GeneID:132344670,GenBank:XM_059884311.1;Name=XM_059884311.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344670;model_evidence=Supporting evidence includes similarity to: 4 Proteins%2C and 97%25 coverage of the annotated genomic feature by RNAseq alignments;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00272;gene_id=Cattle_Y_G00189;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884311.1
haplotype2-0000357	CAT	exon	10956019	10956827	.	-	.	ID=Cattle_Y_E00339;Parent=Cattle_Y_T00272;Dbxref=GeneID:132344670,GenBank:XM_059884311.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344670;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00272;gene_id=Cattle_Y_G00189;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884311.1-2
haplotype2-0000357	CAT	exon	10957258	10957767	.	-	.	ID=Cattle_Y_E00340;Parent=Cattle_Y_T00272;Dbxref=GeneID:132344670,GenBank:XM_059884311.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344670;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00272;gene_id=Cattle_Y_G00189;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884311.1-1
haplotype2-0000357	CAT	CDS	10956093	10956827	.	-	0	ID=Cattle_Y_C00280;Parent=Cattle_Y_T00272;gene_id=Cattle_Y_G00189;transcript_id=Cattle_Y_T00272;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	10957258	10957767	.	-	0	ID=Cattle_Y_C00281;Parent=Cattle_Y_T00272;gene_id=Cattle_Y_G00189;transcript_id=Cattle_Y_T00272;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	11033509	11034050	.	+	.	ID=Cattle_Y_G00190;Dbxref=GeneID:132344657;Name=LOC132344657;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344657;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00190;source_id=gene-LOC132344657
haplotype2-0000357	CAT	mRNA	11033509	11034050	.	+	.	ID=Cattle_Y_T00273;Parent=Cattle_Y_G00190;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;Name=XM_059884302.1;gbkey=mRNA;gene=LOC132344657;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00273;gene_id=Cattle_Y_G00190;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884302.1
haplotype2-0000357	CAT	exon	11033509	11033634	.	+	.	ID=Cattle_Y_E00341;Parent=Cattle_Y_T00273;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00273;gene_id=Cattle_Y_G00190;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-1
haplotype2-0000357	CAT	exon	11033698	11034050	.	+	.	ID=Cattle_Y_E00342;Parent=Cattle_Y_T00273;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00273;gene_id=Cattle_Y_G00190;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-2
haplotype2-0000357	CAT	CDS	11033827	11034050	.	+	0	ID=Cattle_Y_C00282;Parent=Cattle_Y_T00273;Dbxref=GeneID:132344657,GenBank:XP_059740285.1;Name=XP_059740285.1;gbkey=CDS;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740285.1_17;gene_id=Cattle_Y_G00190;transcript_id=Cattle_Y_T00273;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	11059815	11060342	.	-	.	ID=Cattle_Y_G00191;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00191;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	11059815	11060342	.	-	.	ID=Cattle_Y_T00274;Parent=Cattle_Y_G00191;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00274;gene_id=Cattle_Y_G00191;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	11059815	11060146	.	-	.	ID=Cattle_Y_E00343;Parent=Cattle_Y_T00274;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00274;gene_id=Cattle_Y_G00191;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	exon	11060219	11060342	.	-	.	ID=Cattle_Y_E00344;Parent=Cattle_Y_T00274;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00274;gene_id=Cattle_Y_G00191;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	CDS	11059815	11060146	.	-	2	ID=Cattle_Y_C00283;Parent=Cattle_Y_T00274;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_15;gene_id=Cattle_Y_G00191;transcript_id=Cattle_Y_T00274;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	11060219	11060342	.	-	0	ID=Cattle_Y_C00284;Parent=Cattle_Y_T00274;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_15;gene_id=Cattle_Y_G00191;transcript_id=Cattle_Y_T00274;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	11064654	11066447	.	-	.	ID=Cattle_Y_G00192;Dbxref=GeneID:132344679;Name=LOC132344679;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344679;gene_biotype=protein_coding;gene_id=Cattle_Y_G00192;source_id=gene-LOC132344679
haplotype2-0000357	CAT	mRNA	11064654	11066447	.	-	.	ID=Cattle_Y_T00275;Parent=Cattle_Y_G00192;Dbxref=GeneID:132344679,GenBank:XM_059884319.1;Name=XM_059884319.1;gbkey=mRNA;gene=LOC132344679;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C 1 long SRA read%2C and 98%25 coverage of the annotated genomic feature by RNAseq alignments;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00275;gene_id=Cattle_Y_G00192;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884319.1
haplotype2-0000357	CAT	exon	11064654	11066447	.	-	.	ID=Cattle_Y_E00345;Parent=Cattle_Y_T00275;Dbxref=GeneID:132344679,GenBank:XM_059884319.1;gbkey=mRNA;gene=LOC132344679;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00275;gene_id=Cattle_Y_G00192;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884319.1-1
haplotype2-0000357	CAT	CDS	11064753	11066384	.	-	0	ID=Cattle_Y_C00285;Parent=Cattle_Y_T00275;gene_id=Cattle_Y_G00192;transcript_id=Cattle_Y_T00275;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	11081800	11082537	.	-	.	ID=Cattle_Y_G00193;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00193;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	11081800	11082537	.	-	.	ID=Cattle_Y_T00276;Parent=Cattle_Y_G00193;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00193;transcript_id=Cattle_Y_T00276;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	11106694	11108597	.	+	.	ID=Cattle_Y_G00194;Dbxref=GeneID:132344659;Name=LOC132344659;description=testis-specific Y-encoded protein 1-like;end_range=24663580,.;gbkey=Gene;gene=LOC132344659;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00194;source_id=gene-LOC132344659
haplotype2-0000357	CAT	mRNA	11106694	11108597	.	+	.	ID=Cattle_Y_T00277;Parent=Cattle_Y_G00194;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;Name=XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00277;gene_id=Cattle_Y_G00194;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884304.1
haplotype2-0000357	CAT	exon	11106694	11107014	.	+	.	ID=Cattle_Y_E00346;Parent=Cattle_Y_T00277;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00277;gene_id=Cattle_Y_G00194;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-1
haplotype2-0000357	CAT	exon	11107792	11107867	.	+	.	ID=Cattle_Y_E00347;Parent=Cattle_Y_T00277;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00277;gene_id=Cattle_Y_G00194;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-2
haplotype2-0000357	CAT	exon	11108051	11108164	.	+	.	ID=Cattle_Y_E00348;Parent=Cattle_Y_T00277;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00277;gene_id=Cattle_Y_G00194;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-3
haplotype2-0000357	CAT	exon	11108258	11108403	.	+	.	ID=Cattle_Y_E00349;Parent=Cattle_Y_T00277;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00277;gene_id=Cattle_Y_G00194;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-4
haplotype2-0000357	CAT	exon	11108520	11108597	.	+	.	ID=Cattle_Y_E00350;Parent=Cattle_Y_T00277;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00277;gene_id=Cattle_Y_G00194;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-5
haplotype2-0000357	CAT	CDS	11106694	11107014	.	+	0	ID=Cattle_Y_C00286;Parent=Cattle_Y_T00277;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;end_range=24663580,.;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_2;gene_id=Cattle_Y_G00194;transcript_id=Cattle_Y_T00277;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	11107792	11107867	.	+	0	ID=Cattle_Y_C00287;Parent=Cattle_Y_T00277;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_2;gene_id=Cattle_Y_G00194;transcript_id=Cattle_Y_T00277;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	11108051	11108164	.	+	2	ID=Cattle_Y_C00288;Parent=Cattle_Y_T00277;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_2;gene_id=Cattle_Y_G00194;transcript_id=Cattle_Y_T00277;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	11108258	11108403	.	+	2	ID=Cattle_Y_C00289;Parent=Cattle_Y_T00277;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_2;gene_id=Cattle_Y_G00194;transcript_id=Cattle_Y_T00277;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	11108520	11108597	.	+	0	ID=Cattle_Y_C00290;Parent=Cattle_Y_T00277;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_2;gene_id=Cattle_Y_G00194;transcript_id=Cattle_Y_T00277;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	11252569	11254460	.	-	.	ID=Cattle_Y_G00195;Dbxref=GeneID:132344659;Name=LOC132344659;description=testis-specific Y-encoded protein 1-like;end_range=24663580,.;gbkey=Gene;gene=LOC132344659;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00195;source_id=gene-LOC132344659
haplotype2-0000357	CAT	mRNA	11252569	11254460	.	-	.	ID=Cattle_Y_T00278;Parent=Cattle_Y_G00195;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;Name=XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00278;gene_id=Cattle_Y_G00195;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884304.1
haplotype2-0000357	CAT	exon	11252569	11252646	.	-	.	ID=Cattle_Y_E00351;Parent=Cattle_Y_T00278;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00278;gene_id=Cattle_Y_G00195;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-5
haplotype2-0000357	CAT	exon	11252763	11252908	.	-	.	ID=Cattle_Y_E00352;Parent=Cattle_Y_T00278;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00278;gene_id=Cattle_Y_G00195;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-4
haplotype2-0000357	CAT	exon	11253004	11253117	.	-	.	ID=Cattle_Y_E00353;Parent=Cattle_Y_T00278;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00278;gene_id=Cattle_Y_G00195;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-3
haplotype2-0000357	CAT	exon	11253301	11253376	.	-	.	ID=Cattle_Y_E00354;Parent=Cattle_Y_T00278;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00278;gene_id=Cattle_Y_G00195;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-2
haplotype2-0000357	CAT	exon	11254140	11254460	.	-	.	ID=Cattle_Y_E00355;Parent=Cattle_Y_T00278;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00278;gene_id=Cattle_Y_G00195;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-1
haplotype2-0000357	CAT	CDS	11252569	11252646	.	-	0	ID=Cattle_Y_C00291;Parent=Cattle_Y_T00278;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_15;gene_id=Cattle_Y_G00195;transcript_id=Cattle_Y_T00278;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	11252763	11252908	.	-	2	ID=Cattle_Y_C00292;Parent=Cattle_Y_T00278;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_15;gene_id=Cattle_Y_G00195;transcript_id=Cattle_Y_T00278;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	11253004	11253117	.	-	2	ID=Cattle_Y_C00293;Parent=Cattle_Y_T00278;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_15;gene_id=Cattle_Y_G00195;transcript_id=Cattle_Y_T00278;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	11253301	11253376	.	-	0	ID=Cattle_Y_C00294;Parent=Cattle_Y_T00278;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_15;gene_id=Cattle_Y_G00195;transcript_id=Cattle_Y_T00278;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	11254140	11254460	.	-	0	ID=Cattle_Y_C00295;Parent=Cattle_Y_T00278;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;end_range=24663580,.;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_15;gene_id=Cattle_Y_G00195;transcript_id=Cattle_Y_T00278;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	11291884	11302853	.	+	.	ID=Cattle_Y_G00196;Dbxref=GeneID:132344681;Name=LOC132344681;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344681;gene_biotype=protein_coding;gene_id=Cattle_Y_G00196;source_id=gene-LOC132344681
haplotype2-0000357	CAT	mRNA	11291884	11302853	.	+	.	ID=Cattle_Y_T00279;Parent=Cattle_Y_G00196;Dbxref=GeneID:132344681,GenBank:XM_059884321.1;Name=XM_059884321.1;gbkey=mRNA;gene=LOC132344681;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00279;gene_id=Cattle_Y_G00196;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884321.1
haplotype2-0000357	CAT	exon	11291884	11292009	.	+	.	ID=Cattle_Y_E00356;Parent=Cattle_Y_T00279;Dbxref=GeneID:132344681,GenBank:XM_059884321.1;gbkey=mRNA;gene=LOC132344681;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00279;gene_id=Cattle_Y_G00196;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884321.1-1
haplotype2-0000357	CAT	exon	11301046	11302853	.	+	.	ID=Cattle_Y_E00357;Parent=Cattle_Y_T00279;Dbxref=GeneID:132344681,GenBank:XM_059884321.1;gbkey=mRNA;gene=LOC132344681;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00279;gene_id=Cattle_Y_G00196;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884321.1-2
haplotype2-0000357	CAT	CDS	11301117	11302748	.	+	0	ID=Cattle_Y_C00296;Parent=Cattle_Y_T00279;Dbxref=GeneID:132344681,GenBank:XP_059740304.1;Name=XP_059740304.1;gbkey=CDS;gene=LOC132344681;product=zinc finger protein 280B-like;protein_id=XP_059740304.1;gene_id=Cattle_Y_G00196;transcript_id=Cattle_Y_T00279;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	11307150	11307677	.	+	.	ID=Cattle_Y_G00197;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00197;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	11307150	11307677	.	+	.	ID=Cattle_Y_T00280;Parent=Cattle_Y_G00197;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00280;gene_id=Cattle_Y_G00197;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	11307150	11307273	.	+	.	ID=Cattle_Y_E00358;Parent=Cattle_Y_T00280;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00280;gene_id=Cattle_Y_G00197;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	11307346	11307677	.	+	.	ID=Cattle_Y_E00359;Parent=Cattle_Y_T00280;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00280;gene_id=Cattle_Y_G00197;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	11307150	11307273	.	+	0	ID=Cattle_Y_C00297;Parent=Cattle_Y_T00280;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_23;gene_id=Cattle_Y_G00197;transcript_id=Cattle_Y_T00280;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	11307346	11307677	.	+	2	ID=Cattle_Y_C00298;Parent=Cattle_Y_T00280;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_23;gene_id=Cattle_Y_G00197;transcript_id=Cattle_Y_T00280;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	11333451	11333992	.	-	.	ID=Cattle_Y_G00198;Dbxref=GeneID:132344657;Name=LOC132344657;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344657;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00198;source_id=gene-LOC132344657
haplotype2-0000357	CAT	mRNA	11333451	11333992	.	-	.	ID=Cattle_Y_T00281;Parent=Cattle_Y_G00198;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;Name=XM_059884302.1;gbkey=mRNA;gene=LOC132344657;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00281;gene_id=Cattle_Y_G00198;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884302.1
haplotype2-0000357	CAT	exon	11333451	11333803	.	-	.	ID=Cattle_Y_E00360;Parent=Cattle_Y_T00281;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00281;gene_id=Cattle_Y_G00198;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-2
haplotype2-0000357	CAT	exon	11333867	11333992	.	-	.	ID=Cattle_Y_E00361;Parent=Cattle_Y_T00281;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00281;gene_id=Cattle_Y_G00198;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-1
haplotype2-0000357	CAT	CDS	11333451	11333674	.	-	0	ID=Cattle_Y_C00299;Parent=Cattle_Y_T00281;Dbxref=GeneID:132344657,GenBank:XP_059740285.1;Name=XP_059740285.1;gbkey=CDS;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740285.1_7;gene_id=Cattle_Y_G00198;transcript_id=Cattle_Y_T00281;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	11401260	11401989	.	-	.	ID=Cattle_Y_G00199;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00199;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	11408628	11410392	.	+	.	ID=Cattle_Y_G00200;Dbxref=GeneID:132344671;Name=LOC132344671;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344671;gene_biotype=protein_coding;gene_id=Cattle_Y_G00200;source_id=gene-LOC132344671
haplotype2-0000357	CAT	mRNA	11408628	11410392	.	+	.	ID=Cattle_Y_T00282;Parent=Cattle_Y_G00200;Dbxref=GeneID:132344671,GenBank:XM_059884312.1;Name=XM_059884312.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344671;model_evidence=Supporting evidence includes similarity to: 4 Proteins%2C and 96%25 coverage of the annotated genomic feature by RNAseq alignments;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00282;gene_id=Cattle_Y_G00200;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884312.1
haplotype2-0000357	CAT	exon	11408628	11409151	.	+	.	ID=Cattle_Y_E00362;Parent=Cattle_Y_T00282;Dbxref=GeneID:132344671,GenBank:XM_059884312.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344671;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00282;gene_id=Cattle_Y_G00200;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884312.1-1
haplotype2-0000357	CAT	exon	11409582	11410392	.	+	.	ID=Cattle_Y_E00363;Parent=Cattle_Y_T00282;Dbxref=GeneID:132344671,GenBank:XM_059884312.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344671;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00282;gene_id=Cattle_Y_G00200;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884312.1-2
haplotype2-0000357	CAT	CDS	11408642	11409151	.	+	0	ID=Cattle_Y_C00300;Parent=Cattle_Y_T00282;gene_id=Cattle_Y_G00200;transcript_id=Cattle_Y_T00282;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	11409582	11410316	.	+	0	ID=Cattle_Y_C00301;Parent=Cattle_Y_T00282;gene_id=Cattle_Y_G00200;transcript_id=Cattle_Y_T00282;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	11614887	11617045	.	-	.	ID=Cattle_Y_G00201;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00201;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	11614887	11614964	.	-	.	ID=Cattle_Y_T00283;Parent=Cattle_Y_G00201;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00201;transcript_id=Cattle_Y_T00283;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	exon	11615081	11615226	.	-	.	ID=Cattle_Y_T00284;Parent=Cattle_Y_G00201;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00201;transcript_id=Cattle_Y_T00284;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	11615322	11615433	.	-	.	ID=Cattle_Y_T00285;Parent=Cattle_Y_G00201;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00201;transcript_id=Cattle_Y_T00285;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	11615617	11615694	.	-	.	ID=Cattle_Y_T00286;Parent=Cattle_Y_G00201;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00201;transcript_id=Cattle_Y_T00286;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	11616496	11616890	.	-	.	ID=Cattle_Y_T00287;Parent=Cattle_Y_G00201;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00201;transcript_id=Cattle_Y_T00287;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	11616973	11617045	.	-	.	ID=Cattle_Y_T00288;Parent=Cattle_Y_G00201;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00201;transcript_id=Cattle_Y_T00288;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	gene	11708058	11708780	.	-	.	ID=Cattle_Y_G00202;Dbxref=GeneID:132344675;Name=LOC132344675;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344675;gene_biotype=protein_coding;partial=true;start_range=.,28749542;gene_id=Cattle_Y_G00202;source_id=gene-LOC132344675
haplotype2-0000357	CAT	mRNA	11708058	11708780	.	-	.	ID=Cattle_Y_T00289;Parent=Cattle_Y_G00202;Dbxref=GeneID:132344675,GenBank:XM_059884315.1;Name=XM_059884315.1;gbkey=mRNA;gene=LOC132344675;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,28749542;transcript_id=Cattle_Y_T00289;gene_id=Cattle_Y_G00202;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884315.1
haplotype2-0000357	CAT	exon	11708058	11708780	.	-	.	ID=Cattle_Y_E00364;Parent=Cattle_Y_T00289;Dbxref=GeneID:132344675,GenBank:XM_059884315.1;gbkey=mRNA;gene=LOC132344675;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,28749542;transcript_id=Cattle_Y_T00289;gene_id=Cattle_Y_G00202;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884315.1-1
haplotype2-0000357	CAT	CDS	11708058	11708660	.	-	0	ID=Cattle_Y_C00302;Parent=Cattle_Y_T00289;Dbxref=GeneID:132344675,GenBank:XP_059740298.1;Name=XP_059740298.1;gbkey=CDS;gene=LOC132344675;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740298.1;start_range=.,28749542;gene_id=Cattle_Y_G00202;transcript_id=Cattle_Y_T00289;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	11784798	11785372	.	+	.	ID=Cattle_Y_G00203;Dbxref=GeneID:132344660;Name=LOC132344660;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344660;gene_biotype=likely_pseudogene;partial=true;start_range=.,24728184;gene_id=Cattle_Y_G00203;source_id=gene-LOC132344660
haplotype2-0000357	CAT	mRNA	11784798	11785372	.	+	.	ID=Cattle_Y_T00290;Parent=Cattle_Y_G00203;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;Name=XM_059884305.1;gbkey=mRNA;gene=LOC132344660;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00290;gene_id=Cattle_Y_G00203;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884305.1
haplotype2-0000357	CAT	exon	11784798	11784923	.	+	.	ID=Cattle_Y_E00365;Parent=Cattle_Y_T00290;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00290;gene_id=Cattle_Y_G00203;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-1
haplotype2-0000357	CAT	exon	11784987	11785372	.	+	.	ID=Cattle_Y_E00366;Parent=Cattle_Y_T00290;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00290;gene_id=Cattle_Y_G00203;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-2
haplotype2-0000357	CAT	CDS	11785116	11785372	.	+	0	ID=Cattle_Y_C00303;Parent=Cattle_Y_T00290;Dbxref=GeneID:132344660,GenBank:XP_059740288.1;Name=XP_059740288.1;gbkey=CDS;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740288.1_7;start_range=.,24728184;gene_id=Cattle_Y_G00203;transcript_id=Cattle_Y_T00290;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	11818379	11818906	.	-	.	ID=Cattle_Y_G00204;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00204;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	11818379	11818906	.	-	.	ID=Cattle_Y_T00291;Parent=Cattle_Y_G00204;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00291;gene_id=Cattle_Y_G00204;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	11818379	11818710	.	-	.	ID=Cattle_Y_E00367;Parent=Cattle_Y_T00291;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00291;gene_id=Cattle_Y_G00204;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	exon	11818783	11818906	.	-	.	ID=Cattle_Y_E00368;Parent=Cattle_Y_T00291;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00291;gene_id=Cattle_Y_G00204;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	CDS	11818379	11818710	.	-	2	ID=Cattle_Y_C00304;Parent=Cattle_Y_T00291;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_40;gene_id=Cattle_Y_G00204;transcript_id=Cattle_Y_T00291;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	11818783	11818906	.	-	0	ID=Cattle_Y_C00305;Parent=Cattle_Y_T00291;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_40;gene_id=Cattle_Y_G00204;transcript_id=Cattle_Y_T00291;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	11823223	11834268	.	-	.	ID=Cattle_Y_G00205;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00205;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	11823223	11834268	.	-	.	ID=Cattle_Y_T00292;Parent=Cattle_Y_G00205;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00292;gene_id=Cattle_Y_G00205;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	11823223	11825030	.	-	.	ID=Cattle_Y_E00369;Parent=Cattle_Y_T00292;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00292;gene_id=Cattle_Y_G00205;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	exon	11834141	11834268	.	-	.	ID=Cattle_Y_E00370;Parent=Cattle_Y_T00292;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00292;gene_id=Cattle_Y_G00205;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	CDS	11823328	11824959	.	-	0	ID=Cattle_Y_C00306;Parent=Cattle_Y_T00292;gene_id=Cattle_Y_G00205;transcript_id=Cattle_Y_T00292;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	11840358	11841095	.	-	.	ID=Cattle_Y_G00206;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00206;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	11840358	11841095	.	-	.	ID=Cattle_Y_T00293;Parent=Cattle_Y_G00206;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00206;transcript_id=Cattle_Y_T00293;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	11871616	11873556	.	+	.	ID=Cattle_Y_G00207;Dbxref=GeneID:132344672;Name=LOC132344672;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344672;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00207;source_id=gene-LOC132344672
haplotype2-0000357	CAT	exon	11871616	11871998	.	+	.	ID=Cattle_Y_T00294;Parent=Cattle_Y_G00207;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00207;transcript_id=Cattle_Y_T00294;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-5
haplotype2-0000357	CAT	exon	11872749	11872824	.	+	.	ID=Cattle_Y_T00295;Parent=Cattle_Y_G00207;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00207;transcript_id=Cattle_Y_T00295;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-4
haplotype2-0000357	CAT	exon	11873008	11873121	.	+	.	ID=Cattle_Y_T00296;Parent=Cattle_Y_G00207;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00207;transcript_id=Cattle_Y_T00296;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-3
haplotype2-0000357	CAT	exon	11873217	11873362	.	+	.	ID=Cattle_Y_T00297;Parent=Cattle_Y_G00207;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00207;transcript_id=Cattle_Y_T00297;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-2
haplotype2-0000357	CAT	exon	11873479	11873556	.	+	.	ID=Cattle_Y_T00298;Parent=Cattle_Y_G00207;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00207;transcript_id=Cattle_Y_T00298;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672
haplotype2-0000357	CAT	gene	11975552	12006562	.	+	.	ID=Cattle_Y_G00208;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00208;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	11975552	12006562	.	+	.	ID=Cattle_Y_T00299;Parent=Cattle_Y_G00208;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00299;gene_id=Cattle_Y_G00208;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	11975552	11975691	.	+	.	ID=Cattle_Y_E00371;Parent=Cattle_Y_T00299;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00299;gene_id=Cattle_Y_G00208;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	12004735	12006562	.	+	.	ID=Cattle_Y_E00372;Parent=Cattle_Y_T00299;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00299;gene_id=Cattle_Y_G00208;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	12004961	12006562	.	+	0	ID=Cattle_Y_C00307;Parent=Cattle_Y_T00299;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_6;gene_id=Cattle_Y_G00208;transcript_id=Cattle_Y_T00299;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	12015665	12017638	.	-	.	ID=Cattle_Y_G00209;Dbxref=GeneID:132344672;Name=LOC132344672;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344672;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00209;source_id=gene-LOC132344672
haplotype2-0000357	CAT	exon	12015665	12015742	.	-	.	ID=Cattle_Y_T00300;Parent=Cattle_Y_G00209;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00209;transcript_id=Cattle_Y_T00300;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672
haplotype2-0000357	CAT	exon	12015859	12016004	.	-	.	ID=Cattle_Y_T00301;Parent=Cattle_Y_G00209;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00209;transcript_id=Cattle_Y_T00301;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-2
haplotype2-0000357	CAT	exon	12016100	12016213	.	-	.	ID=Cattle_Y_T00302;Parent=Cattle_Y_G00209;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00209;transcript_id=Cattle_Y_T00302;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-3
haplotype2-0000357	CAT	exon	12016397	12016472	.	-	.	ID=Cattle_Y_T00303;Parent=Cattle_Y_G00209;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00209;transcript_id=Cattle_Y_T00303;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-4
haplotype2-0000357	CAT	exon	12017256	12017638	.	-	.	ID=Cattle_Y_T00304;Parent=Cattle_Y_G00209;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00209;transcript_id=Cattle_Y_T00304;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-5
haplotype2-0000357	CAT	gene	12048190	12048927	.	+	.	ID=Cattle_Y_G00210;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00210;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	12048190	12048927	.	+	.	ID=Cattle_Y_T00305;Parent=Cattle_Y_G00210;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00210;transcript_id=Cattle_Y_T00305;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	12055014	12066023	.	+	.	ID=Cattle_Y_G00211;Dbxref=GeneID:132344705;Name=LOC132344705;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344705;gene_biotype=protein_coding;gene_id=Cattle_Y_G00211;source_id=gene-LOC132344705
haplotype2-0000357	CAT	mRNA	12055014	12066023	.	+	.	ID=Cattle_Y_T00306;Parent=Cattle_Y_G00211;Dbxref=GeneID:132344705,GenBank:XM_059884349.1;Name=XM_059884349.1;gbkey=mRNA;gene=LOC132344705;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00306;gene_id=Cattle_Y_G00211;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884349.1
haplotype2-0000357	CAT	exon	12055014	12055164	.	+	.	ID=Cattle_Y_E00373;Parent=Cattle_Y_T00306;Dbxref=GeneID:132344705,GenBank:XM_059884349.1;gbkey=mRNA;gene=LOC132344705;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00306;gene_id=Cattle_Y_G00211;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884349.1-1
haplotype2-0000357	CAT	exon	12064224	12066023	.	+	.	ID=Cattle_Y_E00374;Parent=Cattle_Y_T00306;Dbxref=GeneID:132344705,GenBank:XM_059884349.1;gbkey=mRNA;gene=LOC132344705;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00306;gene_id=Cattle_Y_G00211;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884349.1-2
haplotype2-0000357	CAT	CDS	12064295	12066023	.	+	0	ID=Cattle_Y_C00308;Parent=Cattle_Y_T00306;gene_id=Cattle_Y_G00211;transcript_id=Cattle_Y_T00306;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	12085515	12096065	.	+	.	ID=Cattle_Y_G00212;Dbxref=GeneID:132344542;Name=LOC132344542;description=uncharacterized LOC132344542;gbkey=Gene;gene=LOC132344542;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00212;source_id=gene-LOC132344542
haplotype2-0000357	CAT	exon	12085515	12085907	.	+	.	ID=Cattle_Y_T00307;Parent=Cattle_Y_G00212;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00212;transcript_id=Cattle_Y_T00307;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542
haplotype2-0000357	CAT	exon	12093245	12093383	.	+	.	ID=Cattle_Y_T00308;Parent=Cattle_Y_G00212;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00212;transcript_id=Cattle_Y_T00308;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542-2
haplotype2-0000357	CAT	exon	12094092	12094207	.	+	.	ID=Cattle_Y_T00309;Parent=Cattle_Y_G00212;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00212;transcript_id=Cattle_Y_T00309;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542-3
haplotype2-0000357	CAT	exon	12095926	12096065	.	+	.	ID=Cattle_Y_T00310;Parent=Cattle_Y_G00212;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00212;transcript_id=Cattle_Y_T00310;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542-4
haplotype2-0000357	CAT	gene	12220736	12223733	.	+	.	ID=Cattle_Y_G00213;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00213;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	12276515	12307547	.	+	.	ID=Cattle_Y_G00214;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00214;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	12276515	12307547	.	+	.	ID=Cattle_Y_T00311;Parent=Cattle_Y_G00214;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00311;gene_id=Cattle_Y_G00214;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	12276515	12276654	.	+	.	ID=Cattle_Y_E00375;Parent=Cattle_Y_T00311;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00311;gene_id=Cattle_Y_G00214;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	12305712	12307547	.	+	.	ID=Cattle_Y_E00376;Parent=Cattle_Y_T00311;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00311;gene_id=Cattle_Y_G00214;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	12305939	12307547	.	+	0	ID=Cattle_Y_C00309;Parent=Cattle_Y_T00311;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_22;gene_id=Cattle_Y_G00214;transcript_id=Cattle_Y_T00311;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	12316656	12318777	.	-	.	ID=Cattle_Y_G00215;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00215;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	12316656	12318777	.	-	.	ID=Cattle_Y_T00312;Parent=Cattle_Y_G00215;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00312;gene_id=Cattle_Y_G00215;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	12316656	12316733	.	-	.	ID=Cattle_Y_E00377;Parent=Cattle_Y_T00312;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00312;gene_id=Cattle_Y_G00215;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	12316850	12316995	.	-	.	ID=Cattle_Y_E00378;Parent=Cattle_Y_T00312;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00312;gene_id=Cattle_Y_G00215;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	12317091	12317204	.	-	.	ID=Cattle_Y_E00379;Parent=Cattle_Y_T00312;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00312;gene_id=Cattle_Y_G00215;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	12317388	12317463	.	-	.	ID=Cattle_Y_E00380;Parent=Cattle_Y_T00312;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00312;gene_id=Cattle_Y_G00215;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	12318237	12318631	.	-	.	ID=Cattle_Y_E00381;Parent=Cattle_Y_T00312;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00312;gene_id=Cattle_Y_G00215;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	12318714	12318777	.	-	.	ID=Cattle_Y_E00382;Parent=Cattle_Y_T00312;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00312;gene_id=Cattle_Y_G00215;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	12316656	12316733	.	-	0	ID=Cattle_Y_C00310;Parent=Cattle_Y_T00312;gene_id=Cattle_Y_G00215;transcript_id=Cattle_Y_T00312;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	12316850	12316995	.	-	2	ID=Cattle_Y_C00311;Parent=Cattle_Y_T00312;gene_id=Cattle_Y_G00215;transcript_id=Cattle_Y_T00312;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	12317091	12317204	.	-	2	ID=Cattle_Y_C00312;Parent=Cattle_Y_T00312;gene_id=Cattle_Y_G00215;transcript_id=Cattle_Y_T00312;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	12317388	12317463	.	-	0	ID=Cattle_Y_C00313;Parent=Cattle_Y_T00312;gene_id=Cattle_Y_G00215;transcript_id=Cattle_Y_T00312;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	12318237	12318631	.	-	2	ID=Cattle_Y_C00314;Parent=Cattle_Y_T00312;gene_id=Cattle_Y_G00215;transcript_id=Cattle_Y_T00312;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	12318714	12318777	.	-	0	ID=Cattle_Y_C00315;Parent=Cattle_Y_T00312;gene_id=Cattle_Y_G00215;transcript_id=Cattle_Y_T00312;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	12346251	12346988	.	+	.	ID=Cattle_Y_G00216;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00216;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	12346251	12346988	.	+	.	ID=Cattle_Y_T00313;Parent=Cattle_Y_G00216;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00216;transcript_id=Cattle_Y_T00313;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	12353082	12364526	.	+	.	ID=Cattle_Y_G00217;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00217;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	12353082	12364526	.	+	.	ID=Cattle_Y_T00314;Parent=Cattle_Y_G00217;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00314;gene_id=Cattle_Y_G00217;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	12353082	12353209	.	+	.	ID=Cattle_Y_E00383;Parent=Cattle_Y_T00314;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00314;gene_id=Cattle_Y_G00217;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	exon	12362719	12364526	.	+	.	ID=Cattle_Y_E00384;Parent=Cattle_Y_T00314;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00314;gene_id=Cattle_Y_G00217;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-2
haplotype2-0000357	CAT	CDS	12362790	12364421	.	+	0	ID=Cattle_Y_C00316;Parent=Cattle_Y_T00314;Dbxref=GeneID:768254,GenBank:NP_001071588.1,BGD:BT17804;Name=NP_001071588.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ZNF280BY;inference=similar to AA sequence (same species):RefSeq:NP_001071588.1;product=zinc finger protein 280B;protein_id=NP_001071588.1_28;gene_id=Cattle_Y_G00217;transcript_id=Cattle_Y_T00314;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	12368855	12369382	.	+	.	ID=Cattle_Y_G00218;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00218;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	12368855	12369382	.	+	.	ID=Cattle_Y_T00315;Parent=Cattle_Y_G00218;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00315;gene_id=Cattle_Y_G00218;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	12368855	12368978	.	+	.	ID=Cattle_Y_E00385;Parent=Cattle_Y_T00315;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00315;gene_id=Cattle_Y_G00218;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	12369051	12369382	.	+	.	ID=Cattle_Y_E00386;Parent=Cattle_Y_T00315;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00315;gene_id=Cattle_Y_G00218;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	12368855	12368978	.	+	0	ID=Cattle_Y_C00317;Parent=Cattle_Y_T00315;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_48;gene_id=Cattle_Y_G00218;transcript_id=Cattle_Y_T00315;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	12369051	12369382	.	+	2	ID=Cattle_Y_C00318;Parent=Cattle_Y_T00315;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_48;gene_id=Cattle_Y_G00218;transcript_id=Cattle_Y_T00315;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	12395102	12395676	.	-	.	ID=Cattle_Y_G00219;Dbxref=GeneID:132344660;Name=LOC132344660;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344660;gene_biotype=likely_pseudogene;partial=true;start_range=.,24728184;gene_id=Cattle_Y_G00219;source_id=gene-LOC132344660
haplotype2-0000357	CAT	mRNA	12395102	12395676	.	-	.	ID=Cattle_Y_T00316;Parent=Cattle_Y_G00219;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;Name=XM_059884305.1;gbkey=mRNA;gene=LOC132344660;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00316;gene_id=Cattle_Y_G00219;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884305.1
haplotype2-0000357	CAT	exon	12395102	12395487	.	-	.	ID=Cattle_Y_E00387;Parent=Cattle_Y_T00316;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00316;gene_id=Cattle_Y_G00219;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-2
haplotype2-0000357	CAT	exon	12395551	12395676	.	-	.	ID=Cattle_Y_E00388;Parent=Cattle_Y_T00316;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00316;gene_id=Cattle_Y_G00219;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-1
haplotype2-0000357	CAT	CDS	12395102	12395358	.	-	0	ID=Cattle_Y_C00319;Parent=Cattle_Y_T00316;Dbxref=GeneID:132344660,GenBank:XP_059740288.1;Name=XP_059740288.1;gbkey=CDS;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740288.1_13;start_range=.,24728184;gene_id=Cattle_Y_G00219;transcript_id=Cattle_Y_T00316;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	12443419	12446416	.	-	.	ID=Cattle_Y_G00220;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00220;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	12546418	12546950	.	-	.	ID=Cattle_Y_G00221;Dbxref=GeneID:132344692;Name=LOC132344692;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344692;gene_biotype=protein_coding;partial=true;start_range=.,36344638;gene_id=Cattle_Y_G00221;source_id=gene-LOC132344692
haplotype2-0000357	CAT	mRNA	12546418	12546950	.	-	.	ID=Cattle_Y_T00317;Parent=Cattle_Y_G00221;Dbxref=GeneID:132344692,GenBank:XM_059884334.1;Name=XM_059884334.1;gbkey=mRNA;gene=LOC132344692;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 60%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,36344638;transcript_id=Cattle_Y_T00317;gene_id=Cattle_Y_G00221;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884334.1
haplotype2-0000357	CAT	exon	12546418	12546950	.	-	.	ID=Cattle_Y_E00389;Parent=Cattle_Y_T00317;Dbxref=GeneID:132344692,GenBank:XM_059884334.1;gbkey=mRNA;gene=LOC132344692;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,36344638;transcript_id=Cattle_Y_T00317;gene_id=Cattle_Y_G00221;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884334.1-1
haplotype2-0000357	CAT	CDS	12546418	12546924	.	-	0	ID=Cattle_Y_C00320;Parent=Cattle_Y_T00317;Dbxref=GeneID:132344692,GenBank:XP_059740317.1;Name=XP_059740317.1;gbkey=CDS;gene=LOC132344692;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740317.1_5;start_range=.,36344638;gene_id=Cattle_Y_G00221;transcript_id=Cattle_Y_T00317;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	12635461	12636188	.	-	.	ID=Cattle_Y_G00222;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00222;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	12735930	12738927	.	+	.	ID=Cattle_Y_G00223;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00223;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	12835188	12866179	.	+	.	ID=Cattle_Y_G00224;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00224;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	12835188	12866179	.	+	.	ID=Cattle_Y_T00318;Parent=Cattle_Y_G00224;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00318;gene_id=Cattle_Y_G00224;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	12835188	12835327	.	+	.	ID=Cattle_Y_E00390;Parent=Cattle_Y_T00318;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00318;gene_id=Cattle_Y_G00224;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	12864349	12866179	.	+	.	ID=Cattle_Y_E00391;Parent=Cattle_Y_T00318;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00318;gene_id=Cattle_Y_G00224;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	12864576	12866179	.	+	0	ID=Cattle_Y_C00321;Parent=Cattle_Y_T00318;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_37;gene_id=Cattle_Y_G00224;transcript_id=Cattle_Y_T00318;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	12875287	12877410	.	-	.	ID=Cattle_Y_G00225;Dbxref=GeneID:132344683;Name=LOC132344683;description=testis-specific Y-encoded protein 1-like;end_range=31857700,.;gbkey=Gene;gene=LOC132344683;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00225;source_id=gene-LOC132344683
haplotype2-0000357	CAT	mRNA	12875287	12877410	.	-	.	ID=Cattle_Y_T00319;Parent=Cattle_Y_G00225;Dbxref=GeneID:132344683,GenBank:XM_059884323.1;Name=XM_059884323.1;end_range=31857700,.;gbkey=mRNA;gene=LOC132344683;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00319;gene_id=Cattle_Y_G00225;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884323.1
haplotype2-0000357	CAT	exon	12875287	12875364	.	-	.	ID=Cattle_Y_E00392;Parent=Cattle_Y_T00319;Dbxref=GeneID:132344683,GenBank:XM_059884323.1;gbkey=mRNA;gene=LOC132344683;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00319;gene_id=Cattle_Y_G00225;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884323.1-6
haplotype2-0000357	CAT	exon	12875481	12875626	.	-	.	ID=Cattle_Y_E00393;Parent=Cattle_Y_T00319;Dbxref=GeneID:132344683,GenBank:XM_059884323.1;gbkey=mRNA;gene=LOC132344683;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00319;gene_id=Cattle_Y_G00225;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884323.1-6
haplotype2-0000357	CAT	exon	12875722	12875835	.	-	.	ID=Cattle_Y_E00394;Parent=Cattle_Y_T00319;Dbxref=GeneID:132344683,GenBank:XM_059884323.1;gbkey=mRNA;gene=LOC132344683;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00319;gene_id=Cattle_Y_G00225;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884323.1-6
haplotype2-0000357	CAT	exon	12876019	12876094	.	-	.	ID=Cattle_Y_E00395;Parent=Cattle_Y_T00319;Dbxref=GeneID:132344683,GenBank:XM_059884323.1;gbkey=mRNA;gene=LOC132344683;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00319;gene_id=Cattle_Y_G00225;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884323.1-6
haplotype2-0000357	CAT	exon	12876870	12877264	.	-	.	ID=Cattle_Y_E00396;Parent=Cattle_Y_T00319;Dbxref=GeneID:132344683,GenBank:XM_059884323.1;gbkey=mRNA;gene=LOC132344683;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00319;gene_id=Cattle_Y_G00225;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884323.1-6
haplotype2-0000357	CAT	exon	12877347	12877410	.	-	.	ID=Cattle_Y_E00397;Parent=Cattle_Y_T00319;Dbxref=GeneID:132344683,GenBank:XM_059884323.1;end_range=31857700,.;gbkey=mRNA;gene=LOC132344683;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00319;gene_id=Cattle_Y_G00225;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884323.1-1
haplotype2-0000357	CAT	CDS	12875287	12875364	.	-	0	ID=Cattle_Y_C00322;Parent=Cattle_Y_T00319;gene_id=Cattle_Y_G00225;transcript_id=Cattle_Y_T00319;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	12875481	12875626	.	-	2	ID=Cattle_Y_C00323;Parent=Cattle_Y_T00319;gene_id=Cattle_Y_G00225;transcript_id=Cattle_Y_T00319;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	12875722	12875835	.	-	2	ID=Cattle_Y_C00324;Parent=Cattle_Y_T00319;gene_id=Cattle_Y_G00225;transcript_id=Cattle_Y_T00319;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	12876019	12876094	.	-	0	ID=Cattle_Y_C00325;Parent=Cattle_Y_T00319;gene_id=Cattle_Y_G00225;transcript_id=Cattle_Y_T00319;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	12876870	12877264	.	-	2	ID=Cattle_Y_C00326;Parent=Cattle_Y_T00319;gene_id=Cattle_Y_G00225;transcript_id=Cattle_Y_T00319;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	12877347	12877410	.	-	0	ID=Cattle_Y_C00327;Parent=Cattle_Y_T00319;gene_id=Cattle_Y_G00225;transcript_id=Cattle_Y_T00319;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	12905321	12906058	.	+	.	ID=Cattle_Y_G00226;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00226;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	12905321	12906058	.	+	.	ID=Cattle_Y_T00320;Parent=Cattle_Y_G00226;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00226;transcript_id=Cattle_Y_T00320;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	12921400	12923243	.	+	.	ID=Cattle_Y_G00227;Dbxref=GeneID:132344680;Name=LOC132344680;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344680;gene_biotype=protein_coding;gene_id=Cattle_Y_G00227;source_id=gene-LOC132344680
haplotype2-0000357	CAT	mRNA	12921400	12923243	.	+	.	ID=Cattle_Y_T00321;Parent=Cattle_Y_G00227;Dbxref=GeneID:132344680,GenBank:XM_059884320.1;Name=XM_059884320.1;gbkey=mRNA;gene=LOC132344680;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 99%25 coverage of the annotated genomic feature by RNAseq alignments;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00321;gene_id=Cattle_Y_G00227;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884320.1
haplotype2-0000357	CAT	exon	12921400	12923243	.	+	.	ID=Cattle_Y_E00398;Parent=Cattle_Y_T00321;Dbxref=GeneID:132344680,GenBank:XM_059884320.1;gbkey=mRNA;gene=LOC132344680;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00321;gene_id=Cattle_Y_G00227;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884320.1-1
haplotype2-0000357	CAT	CDS	12921467	12923098	.	+	0	ID=Cattle_Y_C00328;Parent=Cattle_Y_T00321;gene_id=Cattle_Y_G00227;transcript_id=Cattle_Y_T00321;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	12942601	12951793	.	+	.	ID=Cattle_Y_G00228;Dbxref=GeneID:132344543;Name=LOC132344543;description=uncharacterized LOC132344543;gbkey=Gene;gene=LOC132344543;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00228;source_id=gene-LOC132344543
haplotype2-0000357	CAT	exon	12942601	12942993	.	+	.	ID=Cattle_Y_T00322;Parent=Cattle_Y_G00228;Dbxref=GeneID:132344543;gbkey=exon;gene=LOC132344543;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00228;transcript_id=Cattle_Y_T00322;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344543-4
haplotype2-0000357	CAT	exon	12950328	12950466	.	+	.	ID=Cattle_Y_T00323;Parent=Cattle_Y_G00228;Dbxref=GeneID:132344543;gbkey=exon;gene=LOC132344543;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00228;transcript_id=Cattle_Y_T00323;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344543-3
haplotype2-0000357	CAT	exon	12951177	12951303	.	+	.	ID=Cattle_Y_T00324;Parent=Cattle_Y_G00228;Dbxref=GeneID:132344543;gbkey=exon;gene=LOC132344543;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00228;transcript_id=Cattle_Y_T00324;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344543-2
haplotype2-0000357	CAT	exon	12951746	12951793	.	+	.	ID=Cattle_Y_T00325;Parent=Cattle_Y_G00228;Dbxref=GeneID:132344543;gbkey=exon;gene=LOC132344543;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00228;transcript_id=Cattle_Y_T00325;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344543
haplotype2-0000357	CAT	gene	13077538	13079682	.	+	.	ID=Cattle_Y_G00229;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00229;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	13077538	13077610	.	+	.	ID=Cattle_Y_T00326;Parent=Cattle_Y_G00229;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00229;transcript_id=Cattle_Y_T00326;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	exon	13077693	13078087	.	+	.	ID=Cattle_Y_T00327;Parent=Cattle_Y_G00229;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00229;transcript_id=Cattle_Y_T00327;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	13078875	13078952	.	+	.	ID=Cattle_Y_T00328;Parent=Cattle_Y_G00229;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00229;transcript_id=Cattle_Y_T00328;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	13079136	13079247	.	+	.	ID=Cattle_Y_T00329;Parent=Cattle_Y_G00229;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00229;transcript_id=Cattle_Y_T00329;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	13079343	13079488	.	+	.	ID=Cattle_Y_T00330;Parent=Cattle_Y_G00229;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00229;transcript_id=Cattle_Y_T00330;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	13079605	13079682	.	+	.	ID=Cattle_Y_T00331;Parent=Cattle_Y_G00229;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00229;transcript_id=Cattle_Y_T00331;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	gene	13110817	13141827	.	+	.	ID=Cattle_Y_G00230;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00230;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	13110817	13141827	.	+	.	ID=Cattle_Y_T00332;Parent=Cattle_Y_G00230;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00332;gene_id=Cattle_Y_G00230;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	13110817	13110956	.	+	.	ID=Cattle_Y_E00399;Parent=Cattle_Y_T00332;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00332;gene_id=Cattle_Y_G00230;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	13140001	13141827	.	+	.	ID=Cattle_Y_E00400;Parent=Cattle_Y_T00332;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00332;gene_id=Cattle_Y_G00230;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	13140228	13141827	.	+	0	ID=Cattle_Y_C00329;Parent=Cattle_Y_T00332;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_41;gene_id=Cattle_Y_G00230;transcript_id=Cattle_Y_T00332;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	13150917	13153038	.	-	.	ID=Cattle_Y_G00231;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00231;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	13150917	13153038	.	-	.	ID=Cattle_Y_T00333;Parent=Cattle_Y_G00231;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00333;gene_id=Cattle_Y_G00231;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	13150917	13150994	.	-	.	ID=Cattle_Y_E00401;Parent=Cattle_Y_T00333;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00333;gene_id=Cattle_Y_G00231;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	13151111	13151256	.	-	.	ID=Cattle_Y_E00402;Parent=Cattle_Y_T00333;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00333;gene_id=Cattle_Y_G00231;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	13151352	13151465	.	-	.	ID=Cattle_Y_E00403;Parent=Cattle_Y_T00333;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00333;gene_id=Cattle_Y_G00231;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	13151649	13151724	.	-	.	ID=Cattle_Y_E00404;Parent=Cattle_Y_T00333;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00333;gene_id=Cattle_Y_G00231;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	13152498	13152892	.	-	.	ID=Cattle_Y_E00405;Parent=Cattle_Y_T00333;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00333;gene_id=Cattle_Y_G00231;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	13152975	13153038	.	-	.	ID=Cattle_Y_E00406;Parent=Cattle_Y_T00333;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00333;gene_id=Cattle_Y_G00231;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	13150917	13150994	.	-	0	ID=Cattle_Y_C00330;Parent=Cattle_Y_T00333;gene_id=Cattle_Y_G00231;transcript_id=Cattle_Y_T00333;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	13151111	13151256	.	-	2	ID=Cattle_Y_C00331;Parent=Cattle_Y_T00333;gene_id=Cattle_Y_G00231;transcript_id=Cattle_Y_T00333;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	13151352	13151465	.	-	2	ID=Cattle_Y_C00332;Parent=Cattle_Y_T00333;gene_id=Cattle_Y_G00231;transcript_id=Cattle_Y_T00333;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	13151649	13151724	.	-	0	ID=Cattle_Y_C00333;Parent=Cattle_Y_T00333;gene_id=Cattle_Y_G00231;transcript_id=Cattle_Y_T00333;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	13152498	13152892	.	-	2	ID=Cattle_Y_C00334;Parent=Cattle_Y_T00333;gene_id=Cattle_Y_G00231;transcript_id=Cattle_Y_T00333;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	13152975	13153038	.	-	0	ID=Cattle_Y_C00335;Parent=Cattle_Y_T00333;gene_id=Cattle_Y_G00231;transcript_id=Cattle_Y_T00333;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	13180942	13181679	.	+	.	ID=Cattle_Y_G00232;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00232;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	13180942	13181679	.	+	.	ID=Cattle_Y_T00334;Parent=Cattle_Y_G00232;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00232;transcript_id=Cattle_Y_T00334;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	13187750	13198820	.	+	.	ID=Cattle_Y_G00233;Dbxref=GeneID:132344717;Name=LOC132344717;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344717;gene_biotype=protein_coding;gene_id=Cattle_Y_G00233;source_id=gene-LOC132344717
haplotype2-0000357	CAT	mRNA	13187750	13198820	.	+	.	ID=Cattle_Y_T00335;Parent=Cattle_Y_G00233;Dbxref=GeneID:132344717,GenBank:XM_059884362.1;Name=XM_059884362.1;gbkey=mRNA;gene=LOC132344717;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00335;gene_id=Cattle_Y_G00233;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884362.1
haplotype2-0000357	CAT	exon	13187750	13187859	.	+	.	ID=Cattle_Y_E00407;Parent=Cattle_Y_T00335;Dbxref=GeneID:132344717,GenBank:XM_059884362.1;gbkey=mRNA;gene=LOC132344717;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00335;gene_id=Cattle_Y_G00233;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884362.1-1
haplotype2-0000357	CAT	exon	13197012	13198820	.	+	.	ID=Cattle_Y_E00408;Parent=Cattle_Y_T00335;Dbxref=GeneID:132344717,GenBank:XM_059884362.1;gbkey=mRNA;gene=LOC132344717;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00335;gene_id=Cattle_Y_G00233;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884362.1-2
haplotype2-0000357	CAT	CDS	13197083	13198714	.	+	0	ID=Cattle_Y_C00336;Parent=Cattle_Y_T00335;Dbxref=GeneID:132344717,GenBank:XP_059740345.1;Name=XP_059740345.1;gbkey=CDS;gene=LOC132344717;product=zinc finger protein 280B-like;protein_id=XP_059740345.1;gene_id=Cattle_Y_G00233;transcript_id=Cattle_Y_T00335;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	13203139	13203666	.	+	.	ID=Cattle_Y_G00234;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00234;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	13203139	13203666	.	+	.	ID=Cattle_Y_T00336;Parent=Cattle_Y_G00234;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00336;gene_id=Cattle_Y_G00234;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	13203139	13203262	.	+	.	ID=Cattle_Y_E00409;Parent=Cattle_Y_T00336;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00336;gene_id=Cattle_Y_G00234;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	13203335	13203666	.	+	.	ID=Cattle_Y_E00410;Parent=Cattle_Y_T00336;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00336;gene_id=Cattle_Y_G00234;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	13203139	13203262	.	+	0	ID=Cattle_Y_C00337;Parent=Cattle_Y_T00336;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1;gene_id=Cattle_Y_G00234;transcript_id=Cattle_Y_T00336;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	13203335	13203666	.	+	2	ID=Cattle_Y_C00338;Parent=Cattle_Y_T00336;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1;gene_id=Cattle_Y_G00234;transcript_id=Cattle_Y_T00336;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	13229396	13229937	.	-	.	ID=Cattle_Y_G00235;Dbxref=GeneID:132344657;Name=LOC132344657;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344657;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00235;source_id=gene-LOC132344657
haplotype2-0000357	CAT	mRNA	13229396	13229937	.	-	.	ID=Cattle_Y_T00337;Parent=Cattle_Y_G00235;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;Name=XM_059884302.1;gbkey=mRNA;gene=LOC132344657;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00337;gene_id=Cattle_Y_G00235;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884302.1
haplotype2-0000357	CAT	exon	13229396	13229748	.	-	.	ID=Cattle_Y_E00411;Parent=Cattle_Y_T00337;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00337;gene_id=Cattle_Y_G00235;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-2
haplotype2-0000357	CAT	exon	13229812	13229937	.	-	.	ID=Cattle_Y_E00412;Parent=Cattle_Y_T00337;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00337;gene_id=Cattle_Y_G00235;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-1
haplotype2-0000357	CAT	CDS	13229396	13229619	.	-	0	ID=Cattle_Y_C00339;Parent=Cattle_Y_T00337;Dbxref=GeneID:132344657,GenBank:XP_059740285.1;Name=XP_059740285.1;gbkey=CDS;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740285.1_14;gene_id=Cattle_Y_G00235;transcript_id=Cattle_Y_T00337;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	13304651	13306488	.	+	.	ID=Cattle_Y_G00236;Dbxref=GeneID:132344719;Name=LOC132344719;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344719;gene_biotype=protein_coding;gene_id=Cattle_Y_G00236;source_id=gene-LOC132344719
haplotype2-0000357	CAT	mRNA	13304651	13306488	.	+	.	ID=Cattle_Y_T00338;Parent=Cattle_Y_G00236;Dbxref=GeneID:132344719,GenBank:XM_059884364.1;Name=XM_059884364.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344719;model_evidence=Supporting evidence includes similarity to: 4 Proteins%2C and 97%25 coverage of the annotated genomic feature by RNAseq alignments;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00338;gene_id=Cattle_Y_G00236;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884364.1
haplotype2-0000357	CAT	exon	13304651	13305247	.	+	.	ID=Cattle_Y_E00413;Parent=Cattle_Y_T00338;Dbxref=GeneID:132344719,GenBank:XM_059884364.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344719;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00338;gene_id=Cattle_Y_G00236;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884364.1-1
haplotype2-0000357	CAT	exon	13305678	13306488	.	+	.	ID=Cattle_Y_E00414;Parent=Cattle_Y_T00338;Dbxref=GeneID:132344719,GenBank:XM_059884364.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344719;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00338;gene_id=Cattle_Y_G00236;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884364.1-2
haplotype2-0000357	CAT	CDS	13304738	13305247	.	+	0	ID=Cattle_Y_C00340;Parent=Cattle_Y_T00338;gene_id=Cattle_Y_G00236;transcript_id=Cattle_Y_T00338;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	13305678	13306412	.	+	0	ID=Cattle_Y_C00341;Parent=Cattle_Y_T00338;gene_id=Cattle_Y_G00236;transcript_id=Cattle_Y_T00338;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	13470952	13502014	.	+	.	ID=Cattle_Y_G00237;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00237;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	13470952	13502014	.	+	.	ID=Cattle_Y_T00339;Parent=Cattle_Y_G00237;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00339;gene_id=Cattle_Y_G00237;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	13470952	13471091	.	+	.	ID=Cattle_Y_E00415;Parent=Cattle_Y_T00339;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00339;gene_id=Cattle_Y_G00237;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	13500181	13502014	.	+	.	ID=Cattle_Y_E00416;Parent=Cattle_Y_T00339;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00339;gene_id=Cattle_Y_G00237;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	13500407	13502014	.	+	0	ID=Cattle_Y_C00342;Parent=Cattle_Y_T00339;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_38;gene_id=Cattle_Y_G00237;transcript_id=Cattle_Y_T00339;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	13511209	13513100	.	-	.	ID=Cattle_Y_G00238;Dbxref=GeneID:132344659;Name=LOC132344659;description=testis-specific Y-encoded protein 1-like;end_range=24663580,.;gbkey=Gene;gene=LOC132344659;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00238;source_id=gene-LOC132344659
haplotype2-0000357	CAT	mRNA	13511209	13513100	.	-	.	ID=Cattle_Y_T00340;Parent=Cattle_Y_G00238;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;Name=XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00340;gene_id=Cattle_Y_G00238;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884304.1
haplotype2-0000357	CAT	exon	13511209	13511286	.	-	.	ID=Cattle_Y_E00417;Parent=Cattle_Y_T00340;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00340;gene_id=Cattle_Y_G00238;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-5
haplotype2-0000357	CAT	exon	13511403	13511548	.	-	.	ID=Cattle_Y_E00418;Parent=Cattle_Y_T00340;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00340;gene_id=Cattle_Y_G00238;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-4
haplotype2-0000357	CAT	exon	13511644	13511757	.	-	.	ID=Cattle_Y_E00419;Parent=Cattle_Y_T00340;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00340;gene_id=Cattle_Y_G00238;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-3
haplotype2-0000357	CAT	exon	13511941	13512016	.	-	.	ID=Cattle_Y_E00420;Parent=Cattle_Y_T00340;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00340;gene_id=Cattle_Y_G00238;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-2
haplotype2-0000357	CAT	exon	13512780	13513100	.	-	.	ID=Cattle_Y_E00421;Parent=Cattle_Y_T00340;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00340;gene_id=Cattle_Y_G00238;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-1
haplotype2-0000357	CAT	CDS	13511209	13511286	.	-	0	ID=Cattle_Y_C00343;Parent=Cattle_Y_T00340;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_14;gene_id=Cattle_Y_G00238;transcript_id=Cattle_Y_T00340;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	13511403	13511548	.	-	2	ID=Cattle_Y_C00344;Parent=Cattle_Y_T00340;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_14;gene_id=Cattle_Y_G00238;transcript_id=Cattle_Y_T00340;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	13511644	13511757	.	-	2	ID=Cattle_Y_C00345;Parent=Cattle_Y_T00340;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_14;gene_id=Cattle_Y_G00238;transcript_id=Cattle_Y_T00340;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	13511941	13512016	.	-	0	ID=Cattle_Y_C00346;Parent=Cattle_Y_T00340;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_14;gene_id=Cattle_Y_G00238;transcript_id=Cattle_Y_T00340;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	13512780	13513100	.	-	0	ID=Cattle_Y_C00347;Parent=Cattle_Y_T00340;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;end_range=24663580,.;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_14;gene_id=Cattle_Y_G00238;transcript_id=Cattle_Y_T00340;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	13550522	13561463	.	+	.	ID=Cattle_Y_G00239;Dbxref=GeneID:132344700;Name=LOC132344700;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344700;gene_biotype=protein_coding;gene_id=Cattle_Y_G00239;source_id=gene-LOC132344700
haplotype2-0000357	CAT	mRNA	13550522	13561463	.	+	.	ID=Cattle_Y_T00341;Parent=Cattle_Y_G00239;Dbxref=GeneID:132344700,GenBank:XM_059884342.1;Name=XM_059884342.1;gbkey=mRNA;gene=LOC132344700;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00341;gene_id=Cattle_Y_G00239;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884342.1
haplotype2-0000357	CAT	exon	13550522	13550647	.	+	.	ID=Cattle_Y_E00422;Parent=Cattle_Y_T00341;Dbxref=GeneID:132344700,GenBank:XM_059884342.1;gbkey=mRNA;gene=LOC132344700;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00341;gene_id=Cattle_Y_G00239;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884342.1-1
haplotype2-0000357	CAT	exon	13559656	13561463	.	+	.	ID=Cattle_Y_E00423;Parent=Cattle_Y_T00341;Dbxref=GeneID:132344700,GenBank:XM_059884342.1;gbkey=mRNA;gene=LOC132344700;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00341;gene_id=Cattle_Y_G00239;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884342.1-2
haplotype2-0000357	CAT	CDS	13559727	13561358	.	+	0	ID=Cattle_Y_C00348;Parent=Cattle_Y_T00341;Dbxref=GeneID:132344700,GenBank:XP_059740325.1;Name=XP_059740325.1;gbkey=CDS;gene=LOC132344700;product=zinc finger protein 280B-like;protein_id=XP_059740325.1;gene_id=Cattle_Y_G00239;transcript_id=Cattle_Y_T00341;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	13565758	13566285	.	+	.	ID=Cattle_Y_G00240;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00240;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	13565758	13566285	.	+	.	ID=Cattle_Y_T00342;Parent=Cattle_Y_G00240;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00342;gene_id=Cattle_Y_G00240;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	13565758	13565881	.	+	.	ID=Cattle_Y_E00424;Parent=Cattle_Y_T00342;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00342;gene_id=Cattle_Y_G00240;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	13565954	13566285	.	+	.	ID=Cattle_Y_E00425;Parent=Cattle_Y_T00342;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00342;gene_id=Cattle_Y_G00240;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	13565758	13565881	.	+	0	ID=Cattle_Y_C00349;Parent=Cattle_Y_T00342;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_3;gene_id=Cattle_Y_G00240;transcript_id=Cattle_Y_T00342;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	13565954	13566285	.	+	2	ID=Cattle_Y_C00350;Parent=Cattle_Y_T00342;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_3;gene_id=Cattle_Y_G00240;transcript_id=Cattle_Y_T00342;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	13592052	13592593	.	-	.	ID=Cattle_Y_G00241;Dbxref=GeneID:132344657;Name=LOC132344657;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344657;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00241;source_id=gene-LOC132344657
haplotype2-0000357	CAT	mRNA	13592052	13592593	.	-	.	ID=Cattle_Y_T00343;Parent=Cattle_Y_G00241;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;Name=XM_059884302.1;gbkey=mRNA;gene=LOC132344657;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00343;gene_id=Cattle_Y_G00241;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884302.1
haplotype2-0000357	CAT	exon	13592052	13592404	.	-	.	ID=Cattle_Y_E00426;Parent=Cattle_Y_T00343;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00343;gene_id=Cattle_Y_G00241;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-2
haplotype2-0000357	CAT	exon	13592468	13592593	.	-	.	ID=Cattle_Y_E00427;Parent=Cattle_Y_T00343;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00343;gene_id=Cattle_Y_G00241;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-1
haplotype2-0000357	CAT	CDS	13592052	13592275	.	-	0	ID=Cattle_Y_C00351;Parent=Cattle_Y_T00343;Dbxref=GeneID:132344657,GenBank:XP_059740285.1;Name=XP_059740285.1;gbkey=CDS;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740285.1_10;gene_id=Cattle_Y_G00241;transcript_id=Cattle_Y_T00343;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	13659853	13660577	.	-	.	ID=Cattle_Y_G00242;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00242;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	13667225	13669022	.	+	.	ID=Cattle_Y_G00243;Dbxref=GeneID:132344701;Name=LOC132344701;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344701;gene_biotype=protein_coding;gene_id=Cattle_Y_G00243;source_id=gene-LOC132344701
haplotype2-0000357	CAT	mRNA	13667225	13669022	.	+	.	ID=Cattle_Y_T00344;Parent=Cattle_Y_G00243;Dbxref=GeneID:132344701,GenBank:XM_059884343.1;Name=XM_059884343.1;gbkey=mRNA;gene=LOC132344701;model_evidence=Supporting evidence includes similarity to: 4 Proteins%2C 1 long SRA read%2C and 78%25 coverage of the annotated genomic feature by RNAseq alignments;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00344;gene_id=Cattle_Y_G00243;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884343.1
haplotype2-0000357	CAT	exon	13667225	13667748	.	+	.	ID=Cattle_Y_E00428;Parent=Cattle_Y_T00344;Dbxref=GeneID:132344701,GenBank:XM_059884343.1;gbkey=mRNA;gene=LOC132344701;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00344;gene_id=Cattle_Y_G00243;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884343.1-1
haplotype2-0000357	CAT	exon	13668179	13669022	.	+	.	ID=Cattle_Y_E00429;Parent=Cattle_Y_T00344;Dbxref=GeneID:132344701,GenBank:XM_059884343.1;gbkey=mRNA;gene=LOC132344701;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00344;gene_id=Cattle_Y_G00243;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884343.1-2
haplotype2-0000357	CAT	CDS	13667239	13667748	.	+	0	ID=Cattle_Y_C00352;Parent=Cattle_Y_T00344;Dbxref=GeneID:132344701,GenBank:XP_059740326.1;Name=XP_059740326.1;gbkey=CDS;gene=LOC132344701;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740326.1;gene_id=Cattle_Y_G00243;transcript_id=Cattle_Y_T00344;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	13668179	13668913	.	+	0	ID=Cattle_Y_C00353;Parent=Cattle_Y_T00344;Dbxref=GeneID:132344701,GenBank:XP_059740326.1;Name=XP_059740326.1;gbkey=CDS;gene=LOC132344701;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740326.1;gene_id=Cattle_Y_G00243;transcript_id=Cattle_Y_T00344;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	13873491	13875649	.	-	.	ID=Cattle_Y_G00244;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00244;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	13873491	13873568	.	-	.	ID=Cattle_Y_T00345;Parent=Cattle_Y_G00244;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00244;transcript_id=Cattle_Y_T00345;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	exon	13873685	13873830	.	-	.	ID=Cattle_Y_T00346;Parent=Cattle_Y_G00244;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00244;transcript_id=Cattle_Y_T00346;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	13873926	13874037	.	-	.	ID=Cattle_Y_T00347;Parent=Cattle_Y_G00244;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00244;transcript_id=Cattle_Y_T00347;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	13874221	13874298	.	-	.	ID=Cattle_Y_T00348;Parent=Cattle_Y_G00244;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00244;transcript_id=Cattle_Y_T00348;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	13875100	13875494	.	-	.	ID=Cattle_Y_T00349;Parent=Cattle_Y_G00244;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00244;transcript_id=Cattle_Y_T00349;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	13875577	13875649	.	-	.	ID=Cattle_Y_T00350;Parent=Cattle_Y_G00244;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00244;transcript_id=Cattle_Y_T00350;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	gene	13966698	13967261	.	-	.	ID=Cattle_Y_G00245;Dbxref=GeneID:132344690;Name=LOC132344690;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344690;gene_biotype=protein_coding;partial=true;start_range=.,34773871;gene_id=Cattle_Y_G00245;source_id=gene-LOC132344690
haplotype2-0000357	CAT	mRNA	13966698	13967261	.	-	.	ID=Cattle_Y_T00351;Parent=Cattle_Y_G00245;Dbxref=GeneID:132344690,GenBank:XM_059884331.1;Name=XM_059884331.1;gbkey=mRNA;gene=LOC132344690;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 34%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,34773871;transcript_id=Cattle_Y_T00351;gene_id=Cattle_Y_G00245;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884331.1
haplotype2-0000357	CAT	exon	13966698	13967261	.	-	.	ID=Cattle_Y_E00430;Parent=Cattle_Y_T00351;Dbxref=GeneID:132344690,GenBank:XM_059884331.1;gbkey=mRNA;gene=LOC132344690;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,34773871;transcript_id=Cattle_Y_T00351;gene_id=Cattle_Y_G00245;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884331.1-1
haplotype2-0000357	CAT	CDS	13966698	13967261	.	-	0	ID=Cattle_Y_C00354;Parent=Cattle_Y_T00351;Dbxref=GeneID:132344690,GenBank:XP_059740314.1;Name=XP_059740314.1;gbkey=CDS;gene=LOC132344690;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740314.1_3;start_range=.,34773871;gene_id=Cattle_Y_G00245;transcript_id=Cattle_Y_T00351;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	14043436	14044010	.	+	.	ID=Cattle_Y_G00246;Dbxref=GeneID:132344660;Name=LOC132344660;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344660;gene_biotype=likely_pseudogene;partial=true;start_range=.,24728184;gene_id=Cattle_Y_G00246;source_id=gene-LOC132344660
haplotype2-0000357	CAT	mRNA	14043436	14044010	.	+	.	ID=Cattle_Y_T00352;Parent=Cattle_Y_G00246;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;Name=XM_059884305.1;gbkey=mRNA;gene=LOC132344660;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00352;gene_id=Cattle_Y_G00246;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884305.1
haplotype2-0000357	CAT	exon	14043436	14043561	.	+	.	ID=Cattle_Y_E00431;Parent=Cattle_Y_T00352;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00352;gene_id=Cattle_Y_G00246;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-1
haplotype2-0000357	CAT	exon	14043625	14044010	.	+	.	ID=Cattle_Y_E00432;Parent=Cattle_Y_T00352;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00352;gene_id=Cattle_Y_G00246;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-2
haplotype2-0000357	CAT	CDS	14043754	14044010	.	+	0	ID=Cattle_Y_C00355;Parent=Cattle_Y_T00352;Dbxref=GeneID:132344660,GenBank:XP_059740288.1;Name=XP_059740288.1;gbkey=CDS;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740288.1_4;start_range=.,24728184;gene_id=Cattle_Y_G00246;transcript_id=Cattle_Y_T00352;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	14076990	14077517	.	-	.	ID=Cattle_Y_G00247;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00247;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	14076990	14077517	.	-	.	ID=Cattle_Y_T00353;Parent=Cattle_Y_G00247;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00353;gene_id=Cattle_Y_G00247;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	14076990	14077321	.	-	.	ID=Cattle_Y_E00433;Parent=Cattle_Y_T00353;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00353;gene_id=Cattle_Y_G00247;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	exon	14077394	14077517	.	-	.	ID=Cattle_Y_E00434;Parent=Cattle_Y_T00353;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00353;gene_id=Cattle_Y_G00247;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	CDS	14076990	14077321	.	-	2	ID=Cattle_Y_C00356;Parent=Cattle_Y_T00353;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_20;gene_id=Cattle_Y_G00247;transcript_id=Cattle_Y_T00353;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	14077394	14077517	.	-	0	ID=Cattle_Y_C00357;Parent=Cattle_Y_T00353;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_20;gene_id=Cattle_Y_G00247;transcript_id=Cattle_Y_T00353;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	14081685	14083647	.	-	.	ID=Cattle_Y_G00248;Dbxref=GeneID:132344702;Name=LOC132344702;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344702;gene_biotype=protein_coding;gene_id=Cattle_Y_G00248;source_id=gene-LOC132344702
haplotype2-0000357	CAT	mRNA	14081685	14083647	.	-	.	ID=Cattle_Y_T00354;Parent=Cattle_Y_G00248;Dbxref=GeneID:132344702,GenBank:XM_059884344.1;Name=XM_059884344.1;gbkey=mRNA;gene=LOC132344702;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 96%25 coverage of the annotated genomic feature by RNAseq alignments;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00354;gene_id=Cattle_Y_G00248;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884344.1
haplotype2-0000357	CAT	exon	14081685	14083647	.	-	.	ID=Cattle_Y_E00435;Parent=Cattle_Y_T00354;Dbxref=GeneID:132344702,GenBank:XM_059884344.1;gbkey=mRNA;gene=LOC132344702;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00354;gene_id=Cattle_Y_G00248;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884344.1-1
haplotype2-0000357	CAT	CDS	14081949	14083580	.	-	0	ID=Cattle_Y_C00358;Parent=Cattle_Y_T00354;Dbxref=GeneID:132344702,GenBank:XP_059740327.1;Name=XP_059740327.1;gbkey=CDS;gene=LOC132344702;product=zinc finger protein 280B-like;protein_id=XP_059740327.1;gene_id=Cattle_Y_G00248;transcript_id=Cattle_Y_T00354;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	14098982	14099719	.	-	.	ID=Cattle_Y_G00249;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00249;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	14098982	14099719	.	-	.	ID=Cattle_Y_T00355;Parent=Cattle_Y_G00249;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00249;transcript_id=Cattle_Y_T00355;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	14130259	14132234	.	+	.	ID=Cattle_Y_G00250;Dbxref=GeneID:132344672;Name=LOC132344672;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344672;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00250;source_id=gene-LOC132344672
haplotype2-0000357	CAT	exon	14130259	14130641	.	+	.	ID=Cattle_Y_T00356;Parent=Cattle_Y_G00250;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00250;transcript_id=Cattle_Y_T00356;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-5
haplotype2-0000357	CAT	exon	14131427	14131502	.	+	.	ID=Cattle_Y_T00357;Parent=Cattle_Y_G00250;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00250;transcript_id=Cattle_Y_T00357;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-4
haplotype2-0000357	CAT	exon	14131686	14131799	.	+	.	ID=Cattle_Y_T00358;Parent=Cattle_Y_G00250;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00250;transcript_id=Cattle_Y_T00358;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-3
haplotype2-0000357	CAT	exon	14131895	14132040	.	+	.	ID=Cattle_Y_T00359;Parent=Cattle_Y_G00250;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00250;transcript_id=Cattle_Y_T00359;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-2
haplotype2-0000357	CAT	exon	14132157	14132234	.	+	.	ID=Cattle_Y_T00360;Parent=Cattle_Y_G00250;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00250;transcript_id=Cattle_Y_T00360;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672
haplotype2-0000357	CAT	gene	14141339	14172380	.	-	.	ID=Cattle_Y_G00251;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00251;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	14141339	14172380	.	-	.	ID=Cattle_Y_T00361;Parent=Cattle_Y_G00251;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00361;gene_id=Cattle_Y_G00251;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	14141339	14143169	.	-	.	ID=Cattle_Y_E00436;Parent=Cattle_Y_T00361;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00361;gene_id=Cattle_Y_G00251;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	exon	14172241	14172380	.	-	.	ID=Cattle_Y_E00437;Parent=Cattle_Y_T00361;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00361;gene_id=Cattle_Y_G00251;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	CDS	14141339	14142943	.	-	0	ID=Cattle_Y_C00359;Parent=Cattle_Y_T00361;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_3;gene_id=Cattle_Y_G00251;transcript_id=Cattle_Y_T00361;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	14274349	14276324	.	-	.	ID=Cattle_Y_G00252;Dbxref=GeneID:132344672;Name=LOC132344672;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344672;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00252;source_id=gene-LOC132344672
haplotype2-0000357	CAT	exon	14274349	14274426	.	-	.	ID=Cattle_Y_T00362;Parent=Cattle_Y_G00252;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00252;transcript_id=Cattle_Y_T00362;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672
haplotype2-0000357	CAT	exon	14274543	14274688	.	-	.	ID=Cattle_Y_T00363;Parent=Cattle_Y_G00252;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00252;transcript_id=Cattle_Y_T00363;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-2
haplotype2-0000357	CAT	exon	14274784	14274897	.	-	.	ID=Cattle_Y_T00364;Parent=Cattle_Y_G00252;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00252;transcript_id=Cattle_Y_T00364;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-3
haplotype2-0000357	CAT	exon	14275081	14275156	.	-	.	ID=Cattle_Y_T00365;Parent=Cattle_Y_G00252;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00252;transcript_id=Cattle_Y_T00365;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-4
haplotype2-0000357	CAT	exon	14275942	14276324	.	-	.	ID=Cattle_Y_T00366;Parent=Cattle_Y_G00252;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00252;transcript_id=Cattle_Y_T00366;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-5
haplotype2-0000357	CAT	gene	14306864	14307601	.	+	.	ID=Cattle_Y_G00253;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00253;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	14306864	14307601	.	+	.	ID=Cattle_Y_T00367;Parent=Cattle_Y_G00253;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00253;transcript_id=Cattle_Y_T00367;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	14313687	14324716	.	+	.	ID=Cattle_Y_G00254;Dbxref=GeneID:132344705;Name=LOC132344705;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344705;gene_biotype=protein_coding;gene_id=Cattle_Y_G00254;source_id=gene-LOC132344705
haplotype2-0000357	CAT	mRNA	14313687	14324716	.	+	.	ID=Cattle_Y_T00368;Parent=Cattle_Y_G00254;Dbxref=GeneID:132344705,GenBank:XM_059884349.1;Name=XM_059884349.1;gbkey=mRNA;gene=LOC132344705;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00368;gene_id=Cattle_Y_G00254;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884349.1
haplotype2-0000357	CAT	exon	14313687	14313837	.	+	.	ID=Cattle_Y_E00438;Parent=Cattle_Y_T00368;Dbxref=GeneID:132344705,GenBank:XM_059884349.1;gbkey=mRNA;gene=LOC132344705;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00368;gene_id=Cattle_Y_G00254;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884349.1-1
haplotype2-0000357	CAT	exon	14322918	14324716	.	+	.	ID=Cattle_Y_E00439;Parent=Cattle_Y_T00368;Dbxref=GeneID:132344705,GenBank:XM_059884349.1;gbkey=mRNA;gene=LOC132344705;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00368;gene_id=Cattle_Y_G00254;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884349.1-2
haplotype2-0000357	CAT	CDS	14322989	14324620	.	+	0	ID=Cattle_Y_C00360;Parent=Cattle_Y_T00368;gene_id=Cattle_Y_G00254;transcript_id=Cattle_Y_T00368;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	14344240	14354811	.	+	.	ID=Cattle_Y_G00255;Dbxref=GeneID:132344542;Name=LOC132344542;description=uncharacterized LOC132344542;gbkey=Gene;gene=LOC132344542;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00255;source_id=gene-LOC132344542
haplotype2-0000357	CAT	exon	14344240	14344632	.	+	.	ID=Cattle_Y_T00369;Parent=Cattle_Y_G00255;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00255;transcript_id=Cattle_Y_T00369;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542
haplotype2-0000357	CAT	exon	14351995	14352133	.	+	.	ID=Cattle_Y_T00370;Parent=Cattle_Y_G00255;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00255;transcript_id=Cattle_Y_T00370;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542-2
haplotype2-0000357	CAT	exon	14352838	14352953	.	+	.	ID=Cattle_Y_T00371;Parent=Cattle_Y_G00255;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00255;transcript_id=Cattle_Y_T00371;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542-3
haplotype2-0000357	CAT	exon	14354672	14354811	.	+	.	ID=Cattle_Y_T00372;Parent=Cattle_Y_G00255;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00255;transcript_id=Cattle_Y_T00372;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542-4
haplotype2-0000357	CAT	gene	14479519	14481667	.	+	.	ID=Cattle_Y_G00256;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00256;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	14479519	14479591	.	+	.	ID=Cattle_Y_T00373;Parent=Cattle_Y_G00256;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00256;transcript_id=Cattle_Y_T00373;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	exon	14479674	14480068	.	+	.	ID=Cattle_Y_T00374;Parent=Cattle_Y_G00256;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00256;transcript_id=Cattle_Y_T00374;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	14480860	14480937	.	+	.	ID=Cattle_Y_T00375;Parent=Cattle_Y_G00256;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00256;transcript_id=Cattle_Y_T00375;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	14481121	14481232	.	+	.	ID=Cattle_Y_T00376;Parent=Cattle_Y_G00256;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00256;transcript_id=Cattle_Y_T00376;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	14481328	14481473	.	+	.	ID=Cattle_Y_T00377;Parent=Cattle_Y_G00256;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00256;transcript_id=Cattle_Y_T00377;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	14481590	14481667	.	+	.	ID=Cattle_Y_T00378;Parent=Cattle_Y_G00256;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00256;transcript_id=Cattle_Y_T00378;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	gene	14553419	14555540	.	-	.	ID=Cattle_Y_G00257;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00257;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	14553419	14555540	.	-	.	ID=Cattle_Y_T00379;Parent=Cattle_Y_G00257;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00379;gene_id=Cattle_Y_G00257;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	14553419	14553496	.	-	.	ID=Cattle_Y_E00440;Parent=Cattle_Y_T00379;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00379;gene_id=Cattle_Y_G00257;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	14553613	14553758	.	-	.	ID=Cattle_Y_E00441;Parent=Cattle_Y_T00379;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00379;gene_id=Cattle_Y_G00257;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	14553854	14553967	.	-	.	ID=Cattle_Y_E00442;Parent=Cattle_Y_T00379;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00379;gene_id=Cattle_Y_G00257;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	14554151	14554226	.	-	.	ID=Cattle_Y_E00443;Parent=Cattle_Y_T00379;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00379;gene_id=Cattle_Y_G00257;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	14555000	14555394	.	-	.	ID=Cattle_Y_E00444;Parent=Cattle_Y_T00379;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00379;gene_id=Cattle_Y_G00257;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	14555477	14555540	.	-	.	ID=Cattle_Y_E00445;Parent=Cattle_Y_T00379;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00379;gene_id=Cattle_Y_G00257;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	14553419	14553496	.	-	0	ID=Cattle_Y_C00361;Parent=Cattle_Y_T00379;gene_id=Cattle_Y_G00257;transcript_id=Cattle_Y_T00379;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	14553613	14553758	.	-	2	ID=Cattle_Y_C00362;Parent=Cattle_Y_T00379;gene_id=Cattle_Y_G00257;transcript_id=Cattle_Y_T00379;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	14553854	14553967	.	-	2	ID=Cattle_Y_C00363;Parent=Cattle_Y_T00379;gene_id=Cattle_Y_G00257;transcript_id=Cattle_Y_T00379;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	14554151	14554226	.	-	0	ID=Cattle_Y_C00364;Parent=Cattle_Y_T00379;gene_id=Cattle_Y_G00257;transcript_id=Cattle_Y_T00379;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	14555000	14555394	.	-	2	ID=Cattle_Y_C00365;Parent=Cattle_Y_T00379;gene_id=Cattle_Y_G00257;transcript_id=Cattle_Y_T00379;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	14555477	14555540	.	-	0	ID=Cattle_Y_C00366;Parent=Cattle_Y_T00379;gene_id=Cattle_Y_G00257;transcript_id=Cattle_Y_T00379;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	14583451	14584188	.	+	.	ID=Cattle_Y_G00258;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00258;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	14583451	14584188	.	+	.	ID=Cattle_Y_T00380;Parent=Cattle_Y_G00258;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00258;transcript_id=Cattle_Y_T00380;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	14590296	14601343	.	+	.	ID=Cattle_Y_G00259;Dbxref=GeneID:132344704;Name=LOC132344704;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344704;gene_biotype=protein_coding;gene_id=Cattle_Y_G00259;source_id=gene-LOC132344704
haplotype2-0000357	CAT	mRNA	14590296	14601343	.	+	.	ID=Cattle_Y_T00381;Parent=Cattle_Y_G00259;Dbxref=GeneID:132344704,GenBank:XM_059884347.1;Name=XM_059884347.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344704;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=zinc finger protein 280B-like%2C transcript variant X1;transcript_id=Cattle_Y_T00381;gene_id=Cattle_Y_G00259;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884347.1
haplotype2-0000357	CAT	exon	14590296	14590430	.	+	.	ID=Cattle_Y_E00446;Parent=Cattle_Y_T00381;Dbxref=GeneID:132344704,GenBank:XM_059884347.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344704;product=zinc finger protein 280B-like, transcript variant X1;transcript_id=Cattle_Y_T00381;gene_id=Cattle_Y_G00259;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884347.1-1
haplotype2-0000357	CAT	exon	14599536	14601343	.	+	.	ID=Cattle_Y_E00447;Parent=Cattle_Y_T00381;Dbxref=GeneID:132344704,GenBank:XM_059884347.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344704;product=zinc finger protein 280B-like, transcript variant X1;transcript_id=Cattle_Y_T00381;gene_id=Cattle_Y_G00259;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884347.1-2
haplotype2-0000357	CAT	CDS	14599607	14601238	.	+	0	ID=Cattle_Y_C00367;Parent=Cattle_Y_T00381;gene_id=Cattle_Y_G00259;transcript_id=Cattle_Y_T00381;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	14590296	14601343	.	+	.	ID=Cattle_Y_T00382;Parent=Cattle_Y_G00259;Dbxref=GeneID:132344704,GenBank:XM_059884348.1;Name=XM_059884348.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344704;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=zinc finger protein 280B-like%2C transcript variant X2;transcript_id=Cattle_Y_T00382;gene_id=Cattle_Y_G00259;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884348.1
haplotype2-0000357	CAT	exon	14590296	14590388	.	+	.	ID=Cattle_Y_E00448;Parent=Cattle_Y_T00382;Dbxref=GeneID:132344704,GenBank:XM_059884348.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344704;product=zinc finger protein 280B-like, transcript variant X2;transcript_id=Cattle_Y_T00382;gene_id=Cattle_Y_G00259;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884348.1-1
haplotype2-0000357	CAT	exon	14599536	14601343	.	+	.	ID=Cattle_Y_E00449;Parent=Cattle_Y_T00382;Dbxref=GeneID:132344704,GenBank:XM_059884348.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344704;product=zinc finger protein 280B-like, transcript variant X2;transcript_id=Cattle_Y_T00382;gene_id=Cattle_Y_G00259;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884348.1-2
haplotype2-0000357	CAT	CDS	14599607	14601238	.	+	0	ID=Cattle_Y_C00368;Parent=Cattle_Y_T00382;gene_id=Cattle_Y_G00259;transcript_id=Cattle_Y_T00382;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	14605642	14606169	.	+	.	ID=Cattle_Y_G00260;Dbxref=GeneID:132344658;Name=LOC132344658;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344658;gene_biotype=protein_coding;gene_id=Cattle_Y_G00260;source_id=gene-LOC132344658
haplotype2-0000357	CAT	mRNA	14605642	14606169	.	+	.	ID=Cattle_Y_T00383;Parent=Cattle_Y_G00260;Dbxref=GeneID:132344658,GenBank:XM_059884303.1;Name=XM_059884303.1;gbkey=mRNA;gene=LOC132344658;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00383;gene_id=Cattle_Y_G00260;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884303.1
haplotype2-0000357	CAT	exon	14605642	14605765	.	+	.	ID=Cattle_Y_E00450;Parent=Cattle_Y_T00383;Dbxref=GeneID:132344658,GenBank:XM_059884303.1;gbkey=mRNA;gene=LOC132344658;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00383;gene_id=Cattle_Y_G00260;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884303.1-1
haplotype2-0000357	CAT	exon	14605838	14606169	.	+	.	ID=Cattle_Y_E00451;Parent=Cattle_Y_T00383;Dbxref=GeneID:132344658,GenBank:XM_059884303.1;gbkey=mRNA;gene=LOC132344658;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00383;gene_id=Cattle_Y_G00260;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884303.1-2
haplotype2-0000357	CAT	CDS	14605642	14605765	.	+	0	ID=Cattle_Y_C00369;Parent=Cattle_Y_T00383;Dbxref=GeneID:132344658,GenBank:XP_059740286.1;Name=XP_059740286.1;gbkey=CDS;gene=LOC132344658;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740286.1_2;gene_id=Cattle_Y_G00260;transcript_id=Cattle_Y_T00383;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	14605838	14606169	.	+	2	ID=Cattle_Y_C00370;Parent=Cattle_Y_T00383;Dbxref=GeneID:132344658,GenBank:XP_059740286.1;Name=XP_059740286.1;gbkey=CDS;gene=LOC132344658;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740286.1_2;gene_id=Cattle_Y_G00260;transcript_id=Cattle_Y_T00383;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	14715675	14717142	.	+	.	ID=Cattle_Y_G00261;Dbxref=GeneID:132344708;Name=LOC132344708;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344708;gene_biotype=protein_coding;partial=true;start_range=.,51725598;gene_id=Cattle_Y_G00261;source_id=gene-LOC132344708
haplotype2-0000357	CAT	mRNA	14715675	14717142	.	+	.	ID=Cattle_Y_T00384;Parent=Cattle_Y_G00261;Dbxref=GeneID:132344708,GenBank:XM_059884353.1;Name=XM_059884353.1;gbkey=mRNA;gene=LOC132344708;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 11%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,51725598;transcript_id=Cattle_Y_T00384;gene_id=Cattle_Y_G00261;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884353.1
haplotype2-0000357	CAT	exon	14715675	14716184	.	+	.	ID=Cattle_Y_E00452;Parent=Cattle_Y_T00384;Dbxref=GeneID:132344708,GenBank:XM_059884353.1;gbkey=mRNA;gene=LOC132344708;partial=true;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00384;gene_id=Cattle_Y_G00261;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884353.1-1
haplotype2-0000357	CAT	exon	14716615	14717142	.	+	.	ID=Cattle_Y_E00453;Parent=Cattle_Y_T00384;Dbxref=GeneID:132344708,GenBank:XM_059884353.1;gbkey=mRNA;gene=LOC132344708;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,51725598;transcript_id=Cattle_Y_T00384;gene_id=Cattle_Y_G00261;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884353.1-2
haplotype2-0000357	CAT	CDS	14715675	14716184	.	+	0	ID=Cattle_Y_C00371;Parent=Cattle_Y_T00384;Dbxref=GeneID:132344708,GenBank:XP_059740336.1;Name=XP_059740336.1;gbkey=CDS;gene=LOC132344708;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740336.1;gene_id=Cattle_Y_G00261;transcript_id=Cattle_Y_T00384;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	14716615	14717142	.	+	0	ID=Cattle_Y_C00372;Parent=Cattle_Y_T00384;Dbxref=GeneID:132344708,GenBank:XP_059740336.1;Name=XP_059740336.1;gbkey=CDS;gene=LOC132344708;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740336.1;start_range=.,51725598;gene_id=Cattle_Y_G00261;transcript_id=Cattle_Y_T00384;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	14921168	14924163	.	-	.	ID=Cattle_Y_G00262;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00262;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	15015857	15016420	.	-	.	ID=Cattle_Y_G00263;Dbxref=GeneID:132344690;Name=LOC132344690;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344690;gene_biotype=protein_coding;partial=true;start_range=.,34773871;gene_id=Cattle_Y_G00263;source_id=gene-LOC132344690
haplotype2-0000357	CAT	mRNA	15015857	15016420	.	-	.	ID=Cattle_Y_T00385;Parent=Cattle_Y_G00263;Dbxref=GeneID:132344690,GenBank:XM_059884331.1;Name=XM_059884331.1;gbkey=mRNA;gene=LOC132344690;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 34%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,34773871;transcript_id=Cattle_Y_T00385;gene_id=Cattle_Y_G00263;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884331.1
haplotype2-0000357	CAT	exon	15015857	15016420	.	-	.	ID=Cattle_Y_E00454;Parent=Cattle_Y_T00385;Dbxref=GeneID:132344690,GenBank:XM_059884331.1;gbkey=mRNA;gene=LOC132344690;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,34773871;transcript_id=Cattle_Y_T00385;gene_id=Cattle_Y_G00263;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884331.1-1
haplotype2-0000357	CAT	CDS	15015857	15016420	.	-	0	ID=Cattle_Y_C00373;Parent=Cattle_Y_T00385;Dbxref=GeneID:132344690,GenBank:XP_059740314.1;Name=XP_059740314.1;gbkey=CDS;gene=LOC132344690;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740314.1_4;start_range=.,34773871;gene_id=Cattle_Y_G00263;transcript_id=Cattle_Y_T00385;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	15092193	15092767	.	+	.	ID=Cattle_Y_G00264;Dbxref=GeneID:132344660;Name=LOC132344660;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344660;gene_biotype=likely_pseudogene;partial=true;start_range=.,24728184;gene_id=Cattle_Y_G00264;source_id=gene-LOC132344660
haplotype2-0000357	CAT	mRNA	15092193	15092767	.	+	.	ID=Cattle_Y_T00386;Parent=Cattle_Y_G00264;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;Name=XM_059884305.1;gbkey=mRNA;gene=LOC132344660;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00386;gene_id=Cattle_Y_G00264;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884305.1
haplotype2-0000357	CAT	exon	15092193	15092318	.	+	.	ID=Cattle_Y_E00455;Parent=Cattle_Y_T00386;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00386;gene_id=Cattle_Y_G00264;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-1
haplotype2-0000357	CAT	exon	15092382	15092767	.	+	.	ID=Cattle_Y_E00456;Parent=Cattle_Y_T00386;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00386;gene_id=Cattle_Y_G00264;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-2
haplotype2-0000357	CAT	CDS	15092511	15092767	.	+	0	ID=Cattle_Y_C00374;Parent=Cattle_Y_T00386;Dbxref=GeneID:132344660,GenBank:XP_059740288.1;Name=XP_059740288.1;gbkey=CDS;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740288.1_14;start_range=.,24728184;gene_id=Cattle_Y_G00264;transcript_id=Cattle_Y_T00386;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	15125828	15126355	.	-	.	ID=Cattle_Y_G00265;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00265;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	15125828	15126355	.	-	.	ID=Cattle_Y_T00387;Parent=Cattle_Y_G00265;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00387;gene_id=Cattle_Y_G00265;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	15125828	15126159	.	-	.	ID=Cattle_Y_E00457;Parent=Cattle_Y_T00387;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00387;gene_id=Cattle_Y_G00265;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	exon	15126232	15126355	.	-	.	ID=Cattle_Y_E00458;Parent=Cattle_Y_T00387;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00387;gene_id=Cattle_Y_G00265;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	CDS	15125828	15126159	.	-	2	ID=Cattle_Y_C00375;Parent=Cattle_Y_T00387;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_30;gene_id=Cattle_Y_G00265;transcript_id=Cattle_Y_T00387;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	15126232	15126355	.	-	0	ID=Cattle_Y_C00376;Parent=Cattle_Y_T00387;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_30;gene_id=Cattle_Y_G00265;transcript_id=Cattle_Y_T00387;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	15130652	15141695	.	-	.	ID=Cattle_Y_G00266;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00266;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	15130652	15141695	.	-	.	ID=Cattle_Y_T00388;Parent=Cattle_Y_G00266;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00388;gene_id=Cattle_Y_G00266;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	15130652	15132459	.	-	.	ID=Cattle_Y_E00459;Parent=Cattle_Y_T00388;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00388;gene_id=Cattle_Y_G00266;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-2
haplotype2-0000357	CAT	exon	15141568	15141695	.	-	.	ID=Cattle_Y_E00460;Parent=Cattle_Y_T00388;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00388;gene_id=Cattle_Y_G00266;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	CDS	15130757	15132388	.	-	0	ID=Cattle_Y_C00377;Parent=Cattle_Y_T00388;Dbxref=GeneID:768254,GenBank:NP_001071588.1,BGD:BT17804;Name=NP_001071588.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ZNF280BY;inference=similar to AA sequence (same species):RefSeq:NP_001071588.1;product=zinc finger protein 280B;protein_id=NP_001071588.1_17;gene_id=Cattle_Y_G00266;transcript_id=Cattle_Y_T00388;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	15176315	15178438	.	+	.	ID=Cattle_Y_G00267;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00267;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	15176315	15178438	.	+	.	ID=Cattle_Y_T00389;Parent=Cattle_Y_G00267;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00389;gene_id=Cattle_Y_G00267;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	15176315	15176378	.	+	.	ID=Cattle_Y_E00461;Parent=Cattle_Y_T00389;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00389;gene_id=Cattle_Y_G00267;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	exon	15176461	15176855	.	+	.	ID=Cattle_Y_E00462;Parent=Cattle_Y_T00389;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00389;gene_id=Cattle_Y_G00267;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	15177631	15177706	.	+	.	ID=Cattle_Y_E00463;Parent=Cattle_Y_T00389;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00389;gene_id=Cattle_Y_G00267;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	15177890	15178003	.	+	.	ID=Cattle_Y_E00464;Parent=Cattle_Y_T00389;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00389;gene_id=Cattle_Y_G00267;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	15178099	15178244	.	+	.	ID=Cattle_Y_E00465;Parent=Cattle_Y_T00389;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00389;gene_id=Cattle_Y_G00267;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	15178361	15178438	.	+	.	ID=Cattle_Y_E00466;Parent=Cattle_Y_T00389;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00389;gene_id=Cattle_Y_G00267;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	CDS	15176583	15176855	.	+	0	ID=Cattle_Y_C00378;Parent=Cattle_Y_T00389;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_29;gene_id=Cattle_Y_G00267;transcript_id=Cattle_Y_T00389;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	15177631	15177706	.	+	0	ID=Cattle_Y_C00379;Parent=Cattle_Y_T00389;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_29;gene_id=Cattle_Y_G00267;transcript_id=Cattle_Y_T00389;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	15177890	15178003	.	+	2	ID=Cattle_Y_C00380;Parent=Cattle_Y_T00389;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_29;gene_id=Cattle_Y_G00267;transcript_id=Cattle_Y_T00389;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	15178099	15178244	.	+	2	ID=Cattle_Y_C00381;Parent=Cattle_Y_T00389;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_29;gene_id=Cattle_Y_G00267;transcript_id=Cattle_Y_T00389;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	15178361	15178438	.	+	0	ID=Cattle_Y_C00382;Parent=Cattle_Y_T00389;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_29;gene_id=Cattle_Y_G00267;transcript_id=Cattle_Y_T00389;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	15187526	15218577	.	-	.	ID=Cattle_Y_G00268;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00268;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	15187526	15218577	.	-	.	ID=Cattle_Y_T00390;Parent=Cattle_Y_G00268;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00390;gene_id=Cattle_Y_G00268;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	15187526	15189352	.	-	.	ID=Cattle_Y_E00467;Parent=Cattle_Y_T00390;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00390;gene_id=Cattle_Y_G00268;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	exon	15218438	15218577	.	-	.	ID=Cattle_Y_E00468;Parent=Cattle_Y_T00390;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00390;gene_id=Cattle_Y_G00268;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	CDS	15187526	15189125	.	-	0	ID=Cattle_Y_C00383;Parent=Cattle_Y_T00390;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_16;gene_id=Cattle_Y_G00268;transcript_id=Cattle_Y_T00390;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	15315857	15407156	.	-	.	ID=Cattle_Y_G00269;Dbxref=GeneID:132344457;Name=LOC132344457;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344457;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00269;source_id=gene-LOC132344457
haplotype2-0000357	CAT	exon	15315857	15315934	.	-	.	ID=Cattle_Y_T00391;Parent=Cattle_Y_G00269;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00269;transcript_id=Cattle_Y_T00391;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457-7
haplotype2-0000357	CAT	exon	15316051	15316196	.	-	.	ID=Cattle_Y_T00392;Parent=Cattle_Y_G00269;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00269;transcript_id=Cattle_Y_T00392;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457-6
haplotype2-0000357	CAT	exon	15316292	15316403	.	-	.	ID=Cattle_Y_T00393;Parent=Cattle_Y_G00269;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00269;transcript_id=Cattle_Y_T00393;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457-5
haplotype2-0000357	CAT	exon	15316587	15316664	.	-	.	ID=Cattle_Y_T00394;Parent=Cattle_Y_G00269;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00269;transcript_id=Cattle_Y_T00394;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457-4
haplotype2-0000357	CAT	exon	15317458	15317852	.	-	.	ID=Cattle_Y_T00395;Parent=Cattle_Y_G00269;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00269;transcript_id=Cattle_Y_T00395;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457-3
haplotype2-0000357	CAT	exon	15317935	15318017	.	-	.	ID=Cattle_Y_T00396;Parent=Cattle_Y_G00269;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00269;transcript_id=Cattle_Y_T00396;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457-2
haplotype2-0000357	CAT	exon	15407140	15407156	.	-	.	ID=Cattle_Y_T00397;Parent=Cattle_Y_G00269;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00269;transcript_id=Cattle_Y_T00397;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457
haplotype2-0000357	CAT	gene	15417586	15418308	.	+	.	ID=Cattle_Y_G00270;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00270;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	15470194	15470914	.	+	.	ID=Cattle_Y_G00271;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00271;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	15514298	15514937	.	-	.	ID=Cattle_Y_G00272;Dbxref=GeneID:132344682;Name=LOC132344682;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344682;gene_biotype=protein_coding;gene_id=Cattle_Y_G00272;source_id=gene-LOC132344682
haplotype2-0000357	CAT	mRNA	15514298	15514937	.	-	.	ID=Cattle_Y_T00398;Parent=Cattle_Y_G00272;Dbxref=GeneID:132344682,GenBank:XM_059884322.1;Name=XM_059884322.1;gbkey=mRNA;gene=LOC132344682;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 45%25 coverage of the annotated genomic feature by RNAseq alignments;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00398;gene_id=Cattle_Y_G00272;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884322.1
haplotype2-0000357	CAT	exon	15514298	15514937	.	-	.	ID=Cattle_Y_E00469;Parent=Cattle_Y_T00398;Dbxref=GeneID:132344682,GenBank:XM_059884322.1;gbkey=mRNA;gene=LOC132344682;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00398;gene_id=Cattle_Y_G00272;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884322.1-1
haplotype2-0000357	CAT	CDS	15514314	15514937	.	-	0	ID=Cattle_Y_C00384;Parent=Cattle_Y_T00398;Dbxref=GeneID:132344682,GenBank:XP_059740305.1;Name=XP_059740305.1;gbkey=CDS;gene=LOC132344682;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740305.1;gene_id=Cattle_Y_G00272;transcript_id=Cattle_Y_T00398;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	15606375	15607097	.	+	.	ID=Cattle_Y_G00273;Dbxref=GeneID:132344685;Name=LOC132344685;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344685;gene_biotype=protein_coding;partial=true;start_range=.,33040068;gene_id=Cattle_Y_G00273;source_id=gene-LOC132344685
haplotype2-0000357	CAT	mRNA	15606375	15607097	.	+	.	ID=Cattle_Y_T00399;Parent=Cattle_Y_G00273;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;Name=XM_059884326.1;gbkey=mRNA;gene=LOC132344685;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 42%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00399;gene_id=Cattle_Y_G00273;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884326.1
haplotype2-0000357	CAT	exon	15606375	15607097	.	+	.	ID=Cattle_Y_E00470;Parent=Cattle_Y_T00399;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;gbkey=mRNA;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00399;gene_id=Cattle_Y_G00273;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884326.1-1
haplotype2-0000357	CAT	CDS	15606495	15607097	.	+	0	ID=Cattle_Y_C00385;Parent=Cattle_Y_T00399;Dbxref=GeneID:132344685,GenBank:XP_059740309.1;Name=XP_059740309.1;gbkey=CDS;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740309.1_6;start_range=.,33040068;gene_id=Cattle_Y_G00273;transcript_id=Cattle_Y_T00399;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	15650496	15651219	.	-	.	ID=Cattle_Y_G00274;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00274;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	15750901	15753888	.	+	.	ID=Cattle_Y_G00275;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00275;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	15850134	15881184	.	+	.	ID=Cattle_Y_G00276;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00276;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	15850134	15881184	.	+	.	ID=Cattle_Y_T00400;Parent=Cattle_Y_G00276;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00400;gene_id=Cattle_Y_G00276;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	15850134	15850273	.	+	.	ID=Cattle_Y_E00471;Parent=Cattle_Y_T00400;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00400;gene_id=Cattle_Y_G00276;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	15879354	15881184	.	+	.	ID=Cattle_Y_E00472;Parent=Cattle_Y_T00400;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00400;gene_id=Cattle_Y_G00276;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	15880635	15881184	.	+	0	ID=Cattle_Y_C00386;Parent=Cattle_Y_T00400;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_12;gene_id=Cattle_Y_G00276;transcript_id=Cattle_Y_T00400;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	15890286	15949597	.	-	.	ID=Cattle_Y_G00277;Dbxref=GeneID:132344710;Name=LOC132344710;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344710;gene_biotype=protein_coding;gene_id=Cattle_Y_G00277;source_id=gene-LOC132344710
haplotype2-0000357	CAT	mRNA	15890286	15949597	.	-	.	ID=Cattle_Y_T00401;Parent=Cattle_Y_G00277;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;Name=XM_059884354.1;gbkey=mRNA;gene=LOC132344710;model_evidence=Supporting evidence includes similarity to: 3 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00401;gene_id=Cattle_Y_G00277;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884354.1
haplotype2-0000357	CAT	exon	15890286	15890363	.	-	.	ID=Cattle_Y_E00473;Parent=Cattle_Y_T00401;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;gbkey=mRNA;gene=LOC132344710;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00401;gene_id=Cattle_Y_G00277;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884354.1-6
haplotype2-0000357	CAT	exon	15890480	15890625	.	-	.	ID=Cattle_Y_E00474;Parent=Cattle_Y_T00401;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;gbkey=mRNA;gene=LOC132344710;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00401;gene_id=Cattle_Y_G00277;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884354.1-6
haplotype2-0000357	CAT	exon	15890721	15890834	.	-	.	ID=Cattle_Y_E00475;Parent=Cattle_Y_T00401;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;gbkey=mRNA;gene=LOC132344710;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00401;gene_id=Cattle_Y_G00277;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884354.1-6
haplotype2-0000357	CAT	exon	15891018	15891093	.	-	.	ID=Cattle_Y_E00476;Parent=Cattle_Y_T00401;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;gbkey=mRNA;gene=LOC132344710;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00401;gene_id=Cattle_Y_G00277;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884354.1-6
haplotype2-0000357	CAT	exon	15891867	15892261	.	-	.	ID=Cattle_Y_E00477;Parent=Cattle_Y_T00401;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;gbkey=mRNA;gene=LOC132344710;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00401;gene_id=Cattle_Y_G00277;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884354.1-6
haplotype2-0000357	CAT	exon	15949474	15949597	.	-	.	ID=Cattle_Y_E00478;Parent=Cattle_Y_T00401;Dbxref=GeneID:132344710,GenBank:XM_059884354.1;gbkey=mRNA;gene=LOC132344710;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00401;gene_id=Cattle_Y_G00277;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884354.1-1
haplotype2-0000357	CAT	CDS	15890286	15890363	.	-	0	ID=Cattle_Y_C00387;Parent=Cattle_Y_T00401;gene_id=Cattle_Y_G00277;transcript_id=Cattle_Y_T00401;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	15890480	15890625	.	-	2	ID=Cattle_Y_C00388;Parent=Cattle_Y_T00401;gene_id=Cattle_Y_G00277;transcript_id=Cattle_Y_T00401;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	15890721	15890834	.	-	2	ID=Cattle_Y_C00389;Parent=Cattle_Y_T00401;gene_id=Cattle_Y_G00277;transcript_id=Cattle_Y_T00401;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	15891018	15891093	.	-	0	ID=Cattle_Y_C00390;Parent=Cattle_Y_T00401;gene_id=Cattle_Y_G00277;transcript_id=Cattle_Y_T00401;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	15891867	15892261	.	-	2	ID=Cattle_Y_C00391;Parent=Cattle_Y_T00401;gene_id=Cattle_Y_G00277;transcript_id=Cattle_Y_T00401;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	15949474	15949597	.	-	0	ID=Cattle_Y_C00392;Parent=Cattle_Y_T00401;gene_id=Cattle_Y_G00277;transcript_id=Cattle_Y_T00401;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	15920333	15921070	.	+	.	ID=Cattle_Y_G00278;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00278;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	15920333	15921070	.	+	.	ID=Cattle_Y_T00402;Parent=Cattle_Y_G00278;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00278;transcript_id=Cattle_Y_T00402;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	15936410	15938254	.	+	.	ID=Cattle_Y_G00279;Dbxref=GeneID:132344680;Name=LOC132344680;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344680;gene_biotype=protein_coding;gene_id=Cattle_Y_G00279;source_id=gene-LOC132344680
haplotype2-0000357	CAT	mRNA	15936410	15938254	.	+	.	ID=Cattle_Y_T00403;Parent=Cattle_Y_G00279;Dbxref=GeneID:132344680,GenBank:XM_059884320.1;Name=XM_059884320.1;gbkey=mRNA;gene=LOC132344680;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 99%25 coverage of the annotated genomic feature by RNAseq alignments;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00403;gene_id=Cattle_Y_G00279;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884320.1
haplotype2-0000357	CAT	exon	15936410	15938254	.	+	.	ID=Cattle_Y_E00479;Parent=Cattle_Y_T00403;Dbxref=GeneID:132344680,GenBank:XM_059884320.1;gbkey=mRNA;gene=LOC132344680;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00403;gene_id=Cattle_Y_G00279;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884320.1-1
haplotype2-0000357	CAT	CDS	15936477	15938108	.	+	0	ID=Cattle_Y_C00393;Parent=Cattle_Y_T00403;gene_id=Cattle_Y_G00279;transcript_id=Cattle_Y_T00403;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	15957617	15966797	.	+	.	ID=Cattle_Y_G00280;Dbxref=GeneID:132344548;Name=LOC132344548;description=uncharacterized LOC132344548;gbkey=Gene;gene=LOC132344548;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00280;source_id=gene-LOC132344548
haplotype2-0000357	CAT	exon	15957617	15958009	.	+	.	ID=Cattle_Y_T00404;Parent=Cattle_Y_G00280;Dbxref=GeneID:132344548;gbkey=exon;gene=LOC132344548;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00280;transcript_id=Cattle_Y_T00404;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344548-4
haplotype2-0000357	CAT	exon	15965338	15965476	.	+	.	ID=Cattle_Y_T00405;Parent=Cattle_Y_G00280;Dbxref=GeneID:132344548;gbkey=exon;gene=LOC132344548;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00280;transcript_id=Cattle_Y_T00405;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344548-3
haplotype2-0000357	CAT	exon	15966181	15966307	.	+	.	ID=Cattle_Y_T00406;Parent=Cattle_Y_G00280;Dbxref=GeneID:132344548;gbkey=exon;gene=LOC132344548;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00280;transcript_id=Cattle_Y_T00406;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344548-2
haplotype2-0000357	CAT	exon	15966750	15966797	.	+	.	ID=Cattle_Y_T00407;Parent=Cattle_Y_G00280;Dbxref=GeneID:132344548;gbkey=exon;gene=LOC132344548;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00280;transcript_id=Cattle_Y_T00407;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344548
haplotype2-0000357	CAT	gene	16092389	16095376	.	+	.	ID=Cattle_Y_G00281;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00281;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	16191598	16222612	.	+	.	ID=Cattle_Y_G00282;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00282;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	16191598	16222612	.	+	.	ID=Cattle_Y_T00408;Parent=Cattle_Y_G00282;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00408;gene_id=Cattle_Y_G00282;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	16191598	16191737	.	+	.	ID=Cattle_Y_E00480;Parent=Cattle_Y_T00408;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00408;gene_id=Cattle_Y_G00282;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	16220774	16222612	.	+	.	ID=Cattle_Y_E00481;Parent=Cattle_Y_T00408;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00408;gene_id=Cattle_Y_G00282;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	16221001	16222612	.	+	0	ID=Cattle_Y_C00394;Parent=Cattle_Y_T00408;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_45;gene_id=Cattle_Y_G00282;transcript_id=Cattle_Y_T00408;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	16231713	16233632	.	-	.	ID=Cattle_Y_G00283;Dbxref=GeneID:132344659;Name=LOC132344659;description=testis-specific Y-encoded protein 1-like;end_range=24663580,.;gbkey=Gene;gene=LOC132344659;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00283;source_id=gene-LOC132344659
haplotype2-0000357	CAT	mRNA	16231713	16233632	.	-	.	ID=Cattle_Y_T00409;Parent=Cattle_Y_G00283;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;Name=XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00409;gene_id=Cattle_Y_G00283;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884304.1
haplotype2-0000357	CAT	exon	16231713	16231790	.	-	.	ID=Cattle_Y_E00482;Parent=Cattle_Y_T00409;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00409;gene_id=Cattle_Y_G00283;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-5
haplotype2-0000357	CAT	exon	16231907	16232052	.	-	.	ID=Cattle_Y_E00483;Parent=Cattle_Y_T00409;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00409;gene_id=Cattle_Y_G00283;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-4
haplotype2-0000357	CAT	exon	16232148	16232261	.	-	.	ID=Cattle_Y_E00484;Parent=Cattle_Y_T00409;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00409;gene_id=Cattle_Y_G00283;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-3
haplotype2-0000357	CAT	exon	16232445	16232520	.	-	.	ID=Cattle_Y_E00485;Parent=Cattle_Y_T00409;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00409;gene_id=Cattle_Y_G00283;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-2
haplotype2-0000357	CAT	exon	16233294	16233632	.	-	.	ID=Cattle_Y_E00486;Parent=Cattle_Y_T00409;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00409;gene_id=Cattle_Y_G00283;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-1
haplotype2-0000357	CAT	CDS	16231713	16231790	.	-	0	ID=Cattle_Y_C00395;Parent=Cattle_Y_T00409;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_6;gene_id=Cattle_Y_G00283;transcript_id=Cattle_Y_T00409;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	16231907	16232052	.	-	2	ID=Cattle_Y_C00396;Parent=Cattle_Y_T00409;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_6;gene_id=Cattle_Y_G00283;transcript_id=Cattle_Y_T00409;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	16232148	16232261	.	-	2	ID=Cattle_Y_C00397;Parent=Cattle_Y_T00409;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_6;gene_id=Cattle_Y_G00283;transcript_id=Cattle_Y_T00409;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	16232445	16232520	.	-	0	ID=Cattle_Y_C00398;Parent=Cattle_Y_T00409;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_6;gene_id=Cattle_Y_G00283;transcript_id=Cattle_Y_T00409;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	16233294	16233632	.	-	0	ID=Cattle_Y_C00399;Parent=Cattle_Y_T00409;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;end_range=24663580,.;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_6;gene_id=Cattle_Y_G00283;transcript_id=Cattle_Y_T00409;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	16264037	16275116	.	+	.	ID=Cattle_Y_G00284;Dbxref=GeneID:132344527;Name=LOC132344527;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344527;gene_biotype=protein_coding;gene_id=Cattle_Y_G00284;source_id=gene-LOC132344527
haplotype2-0000357	CAT	mRNA	16264037	16275116	.	+	.	ID=Cattle_Y_T00410;Parent=Cattle_Y_G00284;Dbxref=GeneID:132344527,GenBank:XM_059884214.1;Name=XM_059884214.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344527;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=zinc finger protein 280B-like%2C transcript variant X1;transcript_id=Cattle_Y_T00410;gene_id=Cattle_Y_G00284;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884214.1
haplotype2-0000357	CAT	exon	16264037	16264203	.	+	.	ID=Cattle_Y_E00487;Parent=Cattle_Y_T00410;Dbxref=GeneID:132344527,GenBank:XM_059884214.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344527;product=zinc finger protein 280B-like, transcript variant X1;transcript_id=Cattle_Y_T00410;gene_id=Cattle_Y_G00284;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884214.1-1
haplotype2-0000357	CAT	exon	16273309	16275116	.	+	.	ID=Cattle_Y_E00488;Parent=Cattle_Y_T00410;Dbxref=GeneID:132344527,GenBank:XM_059884214.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344527;product=zinc finger protein 280B-like, transcript variant X1;transcript_id=Cattle_Y_T00410;gene_id=Cattle_Y_G00284;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884214.1-2
haplotype2-0000357	CAT	CDS	16273380	16275011	.	+	0	ID=Cattle_Y_C00400;Parent=Cattle_Y_T00410;Dbxref=GeneID:132344527,GenBank:XP_059740197.1;Name=XP_059740197.1;gbkey=CDS;gene=LOC132344527;product=zinc finger protein 280B-like;protein_id=XP_059740197.1;gene_id=Cattle_Y_G00284;transcript_id=Cattle_Y_T00410;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	16264037	16275116	.	+	.	ID=Cattle_Y_T00411;Parent=Cattle_Y_G00284;Dbxref=GeneID:132344527,GenBank:XM_059884215.1;Name=XM_059884215.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344527;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=zinc finger protein 280B-like%2C transcript variant X2;transcript_id=Cattle_Y_T00411;gene_id=Cattle_Y_G00284;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884215.1
haplotype2-0000357	CAT	exon	16264037	16264161	.	+	.	ID=Cattle_Y_E00489;Parent=Cattle_Y_T00411;Dbxref=GeneID:132344527,GenBank:XM_059884215.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344527;product=zinc finger protein 280B-like, transcript variant X2;transcript_id=Cattle_Y_T00411;gene_id=Cattle_Y_G00284;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884215.1-1
haplotype2-0000357	CAT	exon	16273309	16275116	.	+	.	ID=Cattle_Y_E00490;Parent=Cattle_Y_T00411;Dbxref=GeneID:132344527,GenBank:XM_059884215.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344527;product=zinc finger protein 280B-like, transcript variant X2;transcript_id=Cattle_Y_T00411;gene_id=Cattle_Y_G00284;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884215.1-2
haplotype2-0000357	CAT	CDS	16273380	16275011	.	+	0	ID=Cattle_Y_C00401;Parent=Cattle_Y_T00411;Dbxref=GeneID:132344527,GenBank:XP_059740198.1;Name=XP_059740198.1;gbkey=CDS;gene=LOC132344527;product=zinc finger protein 280B-like;protein_id=XP_059740198.1;gene_id=Cattle_Y_G00284;transcript_id=Cattle_Y_T00411;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	16279427	16279954	.	+	.	ID=Cattle_Y_G00285;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00285;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	16279427	16279954	.	+	.	ID=Cattle_Y_T00412;Parent=Cattle_Y_G00285;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00412;gene_id=Cattle_Y_G00285;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	16279427	16279550	.	+	.	ID=Cattle_Y_E00491;Parent=Cattle_Y_T00412;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00412;gene_id=Cattle_Y_G00285;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	16279623	16279954	.	+	.	ID=Cattle_Y_E00492;Parent=Cattle_Y_T00412;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00412;gene_id=Cattle_Y_G00285;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	16279427	16279550	.	+	0	ID=Cattle_Y_C00402;Parent=Cattle_Y_T00412;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_42;gene_id=Cattle_Y_G00285;transcript_id=Cattle_Y_T00412;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	16279623	16279954	.	+	2	ID=Cattle_Y_C00403;Parent=Cattle_Y_T00412;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_42;gene_id=Cattle_Y_G00285;transcript_id=Cattle_Y_T00412;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	16350464	16351186	.	-	.	ID=Cattle_Y_G00286;Dbxref=GeneID:132344685;Name=LOC132344685;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344685;gene_biotype=protein_coding;partial=true;start_range=.,33040068;gene_id=Cattle_Y_G00286;source_id=gene-LOC132344685
haplotype2-0000357	CAT	mRNA	16350464	16351186	.	-	.	ID=Cattle_Y_T00413;Parent=Cattle_Y_G00286;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;Name=XM_059884326.1;gbkey=mRNA;gene=LOC132344685;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 42%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00413;gene_id=Cattle_Y_G00286;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884326.1
haplotype2-0000357	CAT	exon	16350464	16351186	.	-	.	ID=Cattle_Y_E00493;Parent=Cattle_Y_T00413;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;gbkey=mRNA;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00413;gene_id=Cattle_Y_G00286;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884326.1-1
haplotype2-0000357	CAT	CDS	16350464	16351066	.	-	0	ID=Cattle_Y_C00404;Parent=Cattle_Y_T00413;Dbxref=GeneID:132344685,GenBank:XP_059740309.1;Name=XP_059740309.1;gbkey=CDS;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740309.1_12;start_range=.,33040068;gene_id=Cattle_Y_G00286;transcript_id=Cattle_Y_T00413;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	16435264	16435986	.	-	.	ID=Cattle_Y_G00287;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00287;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	16534426	16537413	.	+	.	ID=Cattle_Y_G00288;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00288;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	16633620	16664634	.	+	.	ID=Cattle_Y_G00289;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00289;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	16633620	16664634	.	+	.	ID=Cattle_Y_T00414;Parent=Cattle_Y_G00289;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00414;gene_id=Cattle_Y_G00289;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	16633620	16633759	.	+	.	ID=Cattle_Y_E00494;Parent=Cattle_Y_T00414;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00414;gene_id=Cattle_Y_G00289;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	16662809	16664634	.	+	.	ID=Cattle_Y_E00495;Parent=Cattle_Y_T00414;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00414;gene_id=Cattle_Y_G00289;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	16663036	16664634	.	+	0	ID=Cattle_Y_C00405;Parent=Cattle_Y_T00414;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_21;gene_id=Cattle_Y_G00289;transcript_id=Cattle_Y_T00414;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	16673728	16675851	.	-	.	ID=Cattle_Y_G00290;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00290;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	16673728	16675851	.	-	.	ID=Cattle_Y_T00415;Parent=Cattle_Y_G00290;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00415;gene_id=Cattle_Y_G00290;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	16673728	16673805	.	-	.	ID=Cattle_Y_E00496;Parent=Cattle_Y_T00415;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00415;gene_id=Cattle_Y_G00290;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	16673922	16674067	.	-	.	ID=Cattle_Y_E00497;Parent=Cattle_Y_T00415;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00415;gene_id=Cattle_Y_G00290;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	16674163	16674276	.	-	.	ID=Cattle_Y_E00498;Parent=Cattle_Y_T00415;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00415;gene_id=Cattle_Y_G00290;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	16674460	16674535	.	-	.	ID=Cattle_Y_E00499;Parent=Cattle_Y_T00415;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00415;gene_id=Cattle_Y_G00290;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	16675311	16675705	.	-	.	ID=Cattle_Y_E00500;Parent=Cattle_Y_T00415;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00415;gene_id=Cattle_Y_G00290;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	16675788	16675851	.	-	.	ID=Cattle_Y_E00501;Parent=Cattle_Y_T00415;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00415;gene_id=Cattle_Y_G00290;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	16673728	16673805	.	-	0	ID=Cattle_Y_C00406;Parent=Cattle_Y_T00415;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_34;gene_id=Cattle_Y_G00290;transcript_id=Cattle_Y_T00415;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	16673922	16674067	.	-	2	ID=Cattle_Y_C00407;Parent=Cattle_Y_T00415;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_34;gene_id=Cattle_Y_G00290;transcript_id=Cattle_Y_T00415;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	16674163	16674276	.	-	2	ID=Cattle_Y_C00408;Parent=Cattle_Y_T00415;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_34;gene_id=Cattle_Y_G00290;transcript_id=Cattle_Y_T00415;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	16674460	16674535	.	-	0	ID=Cattle_Y_C00409;Parent=Cattle_Y_T00415;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_34;gene_id=Cattle_Y_G00290;transcript_id=Cattle_Y_T00415;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	16675311	16675700	.	-	0	ID=Cattle_Y_C00410;Parent=Cattle_Y_T00415;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_34;gene_id=Cattle_Y_G00290;transcript_id=Cattle_Y_T00415;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	16703339	16704076	.	+	.	ID=Cattle_Y_G00291;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00291;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	16703339	16704076	.	+	.	ID=Cattle_Y_T00416;Parent=Cattle_Y_G00291;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00291;transcript_id=Cattle_Y_T00416;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	16710167	16721209	.	+	.	ID=Cattle_Y_G00292;Dbxref=GeneID:132344712;Name=LOC132344712;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344712;gene_biotype=protein_coding;gene_id=Cattle_Y_G00292;source_id=gene-LOC132344712
haplotype2-0000357	CAT	mRNA	16710167	16721209	.	+	.	ID=Cattle_Y_T00417;Parent=Cattle_Y_G00292;Dbxref=GeneID:132344712,GenBank:XM_059884356.1;Name=XM_059884356.1;gbkey=mRNA;gene=LOC132344712;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00417;gene_id=Cattle_Y_G00292;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884356.1
haplotype2-0000357	CAT	exon	16710167	16710276	.	+	.	ID=Cattle_Y_E00502;Parent=Cattle_Y_T00417;Dbxref=GeneID:132344712,GenBank:XM_059884356.1;gbkey=mRNA;gene=LOC132344712;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00417;gene_id=Cattle_Y_G00292;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884356.1-1
haplotype2-0000357	CAT	exon	16719401	16721209	.	+	.	ID=Cattle_Y_E00503;Parent=Cattle_Y_T00417;Dbxref=GeneID:132344712,GenBank:XM_059884356.1;gbkey=mRNA;gene=LOC132344712;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00417;gene_id=Cattle_Y_G00292;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884356.1-2
haplotype2-0000357	CAT	CDS	16719472	16721103	.	+	0	ID=Cattle_Y_C00411;Parent=Cattle_Y_T00417;gene_id=Cattle_Y_G00292;transcript_id=Cattle_Y_T00417;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	16751808	16752349	.	-	.	ID=Cattle_Y_G00293;Dbxref=GeneID:132344657;Name=LOC132344657;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344657;gene_biotype=protein_coding;gene_id=Cattle_Y_G00293;source_id=gene-LOC132344657
haplotype2-0000357	CAT	mRNA	16751808	16752349	.	-	.	ID=Cattle_Y_T00418;Parent=Cattle_Y_G00293;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;Name=XM_059884302.1;gbkey=mRNA;gene=LOC132344657;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00418;gene_id=Cattle_Y_G00293;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884302.1
haplotype2-0000357	CAT	exon	16751808	16752160	.	-	.	ID=Cattle_Y_E00504;Parent=Cattle_Y_T00418;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00418;gene_id=Cattle_Y_G00293;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884302.1-2
haplotype2-0000357	CAT	exon	16752224	16752349	.	-	.	ID=Cattle_Y_E00505;Parent=Cattle_Y_T00418;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00418;gene_id=Cattle_Y_G00293;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884302.1-1
haplotype2-0000357	CAT	CDS	16751906	16752160	.	-	0	ID=Cattle_Y_C00412;Parent=Cattle_Y_T00418;Dbxref=GeneID:132344657,GenBank:XP_059740285.1;Name=XP_059740285.1;gbkey=CDS;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740285.1_3;gene_id=Cattle_Y_G00293;transcript_id=Cattle_Y_T00418;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	16752224	16752349	.	-	0	ID=Cattle_Y_C00413;Parent=Cattle_Y_T00418;Dbxref=GeneID:132344657,GenBank:XP_059740285.1;Name=XP_059740285.1;gbkey=CDS;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740285.1_3;gene_id=Cattle_Y_G00293;transcript_id=Cattle_Y_T00418;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	16828072	16830021	.	+	.	ID=Cattle_Y_G00294;Dbxref=GeneID:132344713;Name=LOC132344713;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344713;gene_biotype=protein_coding;gene_id=Cattle_Y_G00294;source_id=gene-LOC132344713
haplotype2-0000357	CAT	mRNA	16828072	16830021	.	+	.	ID=Cattle_Y_T00419;Parent=Cattle_Y_G00294;Dbxref=GeneID:132344713,GenBank:XM_059884357.1;Name=XM_059884357.1;gbkey=mRNA;gene=LOC132344713;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00419;gene_id=Cattle_Y_G00294;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884357.1
haplotype2-0000357	CAT	exon	16828072	16828616	.	+	.	ID=Cattle_Y_E00506;Parent=Cattle_Y_T00419;Dbxref=GeneID:132344713,GenBank:XM_059884357.1;gbkey=mRNA;gene=LOC132344713;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00419;gene_id=Cattle_Y_G00294;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884357.1-1
haplotype2-0000357	CAT	exon	16829047	16830021	.	+	.	ID=Cattle_Y_E00507;Parent=Cattle_Y_T00419;Dbxref=GeneID:132344713,GenBank:XM_059884357.1;gbkey=mRNA;gene=LOC132344713;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00419;gene_id=Cattle_Y_G00294;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884357.1-2
haplotype2-0000357	CAT	CDS	16828107	16828616	.	+	0	ID=Cattle_Y_C00414;Parent=Cattle_Y_T00419;Dbxref=GeneID:132344713,GenBank:XP_059740340.1;Name=XP_059740340.1;gbkey=CDS;gene=LOC132344713;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740340.1;gene_id=Cattle_Y_G00294;transcript_id=Cattle_Y_T00419;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	16829047	16829781	.	+	0	ID=Cattle_Y_C00415;Parent=Cattle_Y_T00419;Dbxref=GeneID:132344713,GenBank:XP_059740340.1;Name=XP_059740340.1;gbkey=CDS;gene=LOC132344713;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740340.1;gene_id=Cattle_Y_G00294;transcript_id=Cattle_Y_T00419;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	17035275	17036806	.	+	.	ID=Cattle_Y_G00295;Dbxref=GeneID:132344714;Name=LOC132344714;description=heat shock transcription factor%2C Y-linked-like;end_range=57053758,.;gbkey=Gene;gene=LOC132344714;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00295;source_id=gene-LOC132344714
haplotype2-0000357	CAT	mRNA	17035275	17036806	.	+	.	ID=Cattle_Y_T00420;Parent=Cattle_Y_G00295;Dbxref=GeneID:132344714,GenBank:XM_059884358.1;Name=XM_059884358.1;end_range=57053758,.;gbkey=mRNA;gene=LOC132344714;model_evidence=Supporting evidence includes similarity to: 5 Proteins%2C and 97%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;partial=true;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00420;gene_id=Cattle_Y_G00295;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884358.1
haplotype2-0000357	CAT	exon	17035275	17035851	.	+	.	ID=Cattle_Y_E00508;Parent=Cattle_Y_T00420;Dbxref=GeneID:132344714,GenBank:XM_059884358.1;gbkey=mRNA;gene=LOC132344714;partial=true;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00420;gene_id=Cattle_Y_G00295;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884358.1-1
haplotype2-0000357	CAT	exon	17036282	17036806	.	+	.	ID=Cattle_Y_E00509;Parent=Cattle_Y_T00420;Dbxref=GeneID:132344714,GenBank:XM_059884358.1;end_range=57053758,.;gbkey=mRNA;gene=LOC132344714;partial=true;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00420;gene_id=Cattle_Y_G00295;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884358.1-2
haplotype2-0000357	CAT	CDS	17035342	17035851	.	+	0	ID=Cattle_Y_C00416;Parent=Cattle_Y_T00420;Dbxref=GeneID:132344714,GenBank:XP_059740341.1;Name=XP_059740341.1;gbkey=CDS;gene=LOC132344714;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740341.1;gene_id=Cattle_Y_G00295;transcript_id=Cattle_Y_T00420;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	17036282	17036806	.	+	0	ID=Cattle_Y_C00417;Parent=Cattle_Y_T00420;Dbxref=GeneID:132344714,GenBank:XP_059740341.1;Name=XP_059740341.1;end_range=57053758,.;gbkey=CDS;gene=LOC132344714;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740341.1;gene_id=Cattle_Y_G00295;transcript_id=Cattle_Y_T00420;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	17133980	17136976	.	+	.	ID=Cattle_Y_G00296;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00296;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	17211475	17213339	.	-	.	ID=Cattle_Y_G00297;Dbxref=GeneID:132344715;Name=LOC132344715;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344715;gene_biotype=protein_coding;gene_id=Cattle_Y_G00297;source_id=gene-LOC132344715
haplotype2-0000357	CAT	mRNA	17211475	17213339	.	-	.	ID=Cattle_Y_T00421;Parent=Cattle_Y_G00297;Dbxref=GeneID:132344715,GenBank:XM_059884359.1;Name=XM_059884359.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344715;model_evidence=Supporting evidence includes similarity to: 4 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00421;gene_id=Cattle_Y_G00297;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884359.1
haplotype2-0000357	CAT	exon	17211475	17212283	.	-	.	ID=Cattle_Y_E00510;Parent=Cattle_Y_T00421;Dbxref=GeneID:132344715,GenBank:XM_059884359.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344715;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00421;gene_id=Cattle_Y_G00297;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884359.1-2
haplotype2-0000357	CAT	exon	17212714	17213339	.	-	.	ID=Cattle_Y_E00511;Parent=Cattle_Y_T00421;Dbxref=GeneID:132344715,GenBank:XM_059884359.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344715;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00421;gene_id=Cattle_Y_G00297;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884359.1-1
haplotype2-0000357	CAT	CDS	17211549	17212283	.	-	0	ID=Cattle_Y_C00418;Parent=Cattle_Y_T00421;Dbxref=GeneID:132344715,GenBank:XP_059740342.1;Name=XP_059740342.1;gbkey=CDS;gene=LOC132344715;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740342.1;gene_id=Cattle_Y_G00297;transcript_id=Cattle_Y_T00421;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	17212714	17213223	.	-	0	ID=Cattle_Y_C00419;Parent=Cattle_Y_T00421;Dbxref=GeneID:132344715,GenBank:XP_059740342.1;Name=XP_059740342.1;gbkey=CDS;gene=LOC132344715;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740342.1;gene_id=Cattle_Y_G00297;transcript_id=Cattle_Y_T00421;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	17288973	17289514	.	+	.	ID=Cattle_Y_G00298;Dbxref=GeneID:132344657;Name=LOC132344657;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344657;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00298;source_id=gene-LOC132344657
haplotype2-0000357	CAT	mRNA	17288973	17289514	.	+	.	ID=Cattle_Y_T00422;Parent=Cattle_Y_G00298;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;Name=XM_059884302.1;gbkey=mRNA;gene=LOC132344657;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00422;gene_id=Cattle_Y_G00298;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884302.1
haplotype2-0000357	CAT	exon	17288973	17289098	.	+	.	ID=Cattle_Y_E00512;Parent=Cattle_Y_T00422;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00422;gene_id=Cattle_Y_G00298;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-1
haplotype2-0000357	CAT	exon	17289162	17289514	.	+	.	ID=Cattle_Y_E00513;Parent=Cattle_Y_T00422;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00422;gene_id=Cattle_Y_G00298;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-2
haplotype2-0000357	CAT	CDS	17289291	17289514	.	+	0	ID=Cattle_Y_C00420;Parent=Cattle_Y_T00422;Dbxref=GeneID:132344657,GenBank:XP_059740285.1;Name=XP_059740285.1;gbkey=CDS;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740285.1_11;gene_id=Cattle_Y_G00298;transcript_id=Cattle_Y_T00422;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	17315284	17315811	.	-	.	ID=Cattle_Y_G00299;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00299;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	17315284	17315811	.	-	.	ID=Cattle_Y_T00423;Parent=Cattle_Y_G00299;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00423;gene_id=Cattle_Y_G00299;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	17315284	17315615	.	-	.	ID=Cattle_Y_E00514;Parent=Cattle_Y_T00423;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00423;gene_id=Cattle_Y_G00299;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	exon	17315688	17315811	.	-	.	ID=Cattle_Y_E00515;Parent=Cattle_Y_T00423;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00423;gene_id=Cattle_Y_G00299;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	CDS	17315284	17315615	.	-	2	ID=Cattle_Y_C00421;Parent=Cattle_Y_T00423;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_11;gene_id=Cattle_Y_G00299;transcript_id=Cattle_Y_T00423;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	17315688	17315811	.	-	0	ID=Cattle_Y_C00422;Parent=Cattle_Y_T00423;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_11;gene_id=Cattle_Y_G00299;transcript_id=Cattle_Y_T00423;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	17320127	17331215	.	-	.	ID=Cattle_Y_G00300;Dbxref=GeneID:132344716;Name=LOC132344716;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344716;gene_biotype=protein_coding;gene_id=Cattle_Y_G00300;source_id=gene-LOC132344716
haplotype2-0000357	CAT	mRNA	17320127	17331215	.	-	.	ID=Cattle_Y_T00424;Parent=Cattle_Y_G00300;Dbxref=GeneID:132344716,GenBank:XM_059884360.1;Name=XM_059884360.1;gbkey=mRNA;gene=LOC132344716;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 98%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=zinc finger protein 280B-like%2C transcript variant X1;transcript_id=Cattle_Y_T00424;gene_id=Cattle_Y_G00300;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884360.1
haplotype2-0000357	CAT	exon	17320127	17321922	.	-	.	ID=Cattle_Y_E00516;Parent=Cattle_Y_T00424;Dbxref=GeneID:132344716,GenBank:XM_059884360.1;gbkey=mRNA;gene=LOC132344716;product=zinc finger protein 280B-like, transcript variant X1;transcript_id=Cattle_Y_T00424;gene_id=Cattle_Y_G00300;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884360.1-2
haplotype2-0000357	CAT	exon	17331040	17331215	.	-	.	ID=Cattle_Y_E00517;Parent=Cattle_Y_T00424;Dbxref=GeneID:132344716,GenBank:XM_059884360.1;gbkey=mRNA;gene=LOC132344716;product=zinc finger protein 280B-like, transcript variant X1;transcript_id=Cattle_Y_T00424;gene_id=Cattle_Y_G00300;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884360.1-1
haplotype2-0000357	CAT	CDS	17320220	17321851	.	-	0	ID=Cattle_Y_C00423;Parent=Cattle_Y_T00424;Dbxref=GeneID:132344716,GenBank:XP_059740343.1;Name=XP_059740343.1;gbkey=CDS;gene=LOC132344716;product=zinc finger protein 280B-like;protein_id=XP_059740343.1;gene_id=Cattle_Y_G00300;transcript_id=Cattle_Y_T00424;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	17320127	17331215	.	-	.	ID=Cattle_Y_T00425;Parent=Cattle_Y_G00300;Dbxref=GeneID:132344716,GenBank:XM_059884361.1;Name=XM_059884361.1;gbkey=mRNA;gene=LOC132344716;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 98%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=zinc finger protein 280B-like%2C transcript variant X2;transcript_id=Cattle_Y_T00425;gene_id=Cattle_Y_G00300;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884361.1
haplotype2-0000357	CAT	exon	17320127	17321922	.	-	.	ID=Cattle_Y_E00518;Parent=Cattle_Y_T00425;Dbxref=GeneID:132344716,GenBank:XM_059884361.1;gbkey=mRNA;gene=LOC132344716;product=zinc finger protein 280B-like, transcript variant X2;transcript_id=Cattle_Y_T00425;gene_id=Cattle_Y_G00300;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884361.1-2
haplotype2-0000357	CAT	exon	17331082	17331215	.	-	.	ID=Cattle_Y_E00519;Parent=Cattle_Y_T00425;Dbxref=GeneID:132344716,GenBank:XM_059884361.1;gbkey=mRNA;gene=LOC132344716;product=zinc finger protein 280B-like, transcript variant X2;transcript_id=Cattle_Y_T00425;gene_id=Cattle_Y_G00300;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884361.1-1
haplotype2-0000357	CAT	CDS	17320220	17321851	.	-	0	ID=Cattle_Y_C00424;Parent=Cattle_Y_T00425;Dbxref=GeneID:132344716,GenBank:XP_059740344.1;Name=XP_059740344.1;gbkey=CDS;gene=LOC132344716;product=zinc finger protein 280B-like;protein_id=XP_059740344.1;gene_id=Cattle_Y_G00300;transcript_id=Cattle_Y_T00425;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	17337266	17338003	.	-	.	ID=Cattle_Y_G00301;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00301;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	17337266	17338003	.	-	.	ID=Cattle_Y_T00426;Parent=Cattle_Y_G00301;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00301;transcript_id=Cattle_Y_T00426;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	17368525	17370474	.	+	.	ID=Cattle_Y_G00302;Dbxref=GeneID:132344672;Name=LOC132344672;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344672;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00302;source_id=gene-LOC132344672
haplotype2-0000357	CAT	exon	17368525	17368907	.	+	.	ID=Cattle_Y_T00427;Parent=Cattle_Y_G00302;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00302;transcript_id=Cattle_Y_T00427;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-5
haplotype2-0000357	CAT	exon	17369667	17369742	.	+	.	ID=Cattle_Y_T00428;Parent=Cattle_Y_G00302;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00302;transcript_id=Cattle_Y_T00428;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-4
haplotype2-0000357	CAT	exon	17369926	17370039	.	+	.	ID=Cattle_Y_T00429;Parent=Cattle_Y_G00302;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00302;transcript_id=Cattle_Y_T00429;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-3
haplotype2-0000357	CAT	exon	17370135	17370280	.	+	.	ID=Cattle_Y_T00430;Parent=Cattle_Y_G00302;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00302;transcript_id=Cattle_Y_T00430;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-2
haplotype2-0000357	CAT	exon	17370397	17370474	.	+	.	ID=Cattle_Y_T00431;Parent=Cattle_Y_G00302;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00302;transcript_id=Cattle_Y_T00431;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672
haplotype2-0000357	CAT	gene	17379585	17410622	.	-	.	ID=Cattle_Y_G00303;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00303;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	17379585	17410622	.	-	.	ID=Cattle_Y_T00432;Parent=Cattle_Y_G00303;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00432;gene_id=Cattle_Y_G00303;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	17379585	17381412	.	-	.	ID=Cattle_Y_E00520;Parent=Cattle_Y_T00432;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00432;gene_id=Cattle_Y_G00303;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	exon	17410483	17410622	.	-	.	ID=Cattle_Y_E00521;Parent=Cattle_Y_T00432;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00432;gene_id=Cattle_Y_G00303;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	CDS	17379585	17381184	.	-	0	ID=Cattle_Y_C00425;Parent=Cattle_Y_T00432;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_49;gene_id=Cattle_Y_G00303;transcript_id=Cattle_Y_T00432;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	17514041	17515936	.	-	.	ID=Cattle_Y_G00304;Dbxref=GeneID:132344659;Name=LOC132344659;description=testis-specific Y-encoded protein 1-like;end_range=24663580,.;gbkey=Gene;gene=LOC132344659;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00304;source_id=gene-LOC132344659
haplotype2-0000357	CAT	mRNA	17514041	17515936	.	-	.	ID=Cattle_Y_T00433;Parent=Cattle_Y_G00304;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;Name=XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00433;gene_id=Cattle_Y_G00304;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884304.1
haplotype2-0000357	CAT	exon	17514041	17514118	.	-	.	ID=Cattle_Y_E00522;Parent=Cattle_Y_T00433;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00433;gene_id=Cattle_Y_G00304;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-5
haplotype2-0000357	CAT	exon	17514235	17514380	.	-	.	ID=Cattle_Y_E00523;Parent=Cattle_Y_T00433;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00433;gene_id=Cattle_Y_G00304;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-4
haplotype2-0000357	CAT	exon	17514474	17514587	.	-	.	ID=Cattle_Y_E00524;Parent=Cattle_Y_T00433;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00433;gene_id=Cattle_Y_G00304;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-3
haplotype2-0000357	CAT	exon	17514771	17514846	.	-	.	ID=Cattle_Y_E00525;Parent=Cattle_Y_T00433;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00433;gene_id=Cattle_Y_G00304;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-2
haplotype2-0000357	CAT	exon	17515616	17515936	.	-	.	ID=Cattle_Y_E00526;Parent=Cattle_Y_T00433;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00433;gene_id=Cattle_Y_G00304;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-1
haplotype2-0000357	CAT	CDS	17514041	17514118	.	-	0	ID=Cattle_Y_C00426;Parent=Cattle_Y_T00433;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_9;gene_id=Cattle_Y_G00304;transcript_id=Cattle_Y_T00433;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	17514235	17514380	.	-	2	ID=Cattle_Y_C00427;Parent=Cattle_Y_T00433;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_9;gene_id=Cattle_Y_G00304;transcript_id=Cattle_Y_T00433;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	17514474	17514587	.	-	2	ID=Cattle_Y_C00428;Parent=Cattle_Y_T00433;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_9;gene_id=Cattle_Y_G00304;transcript_id=Cattle_Y_T00433;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	17514771	17514846	.	-	0	ID=Cattle_Y_C00429;Parent=Cattle_Y_T00433;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_9;gene_id=Cattle_Y_G00304;transcript_id=Cattle_Y_T00433;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	17515616	17515936	.	-	0	ID=Cattle_Y_C00430;Parent=Cattle_Y_T00433;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;end_range=24663580,.;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_9;gene_id=Cattle_Y_G00304;transcript_id=Cattle_Y_T00433;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	17639881	17642009	.	-	.	ID=Cattle_Y_G00305;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00305;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	17639881	17642009	.	-	.	ID=Cattle_Y_T00434;Parent=Cattle_Y_G00305;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00434;gene_id=Cattle_Y_G00305;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	17639881	17639958	.	-	.	ID=Cattle_Y_E00527;Parent=Cattle_Y_T00434;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00434;gene_id=Cattle_Y_G00305;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	17640075	17640220	.	-	.	ID=Cattle_Y_E00528;Parent=Cattle_Y_T00434;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00434;gene_id=Cattle_Y_G00305;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	17640314	17640427	.	-	.	ID=Cattle_Y_E00529;Parent=Cattle_Y_T00434;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00434;gene_id=Cattle_Y_G00305;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	17640611	17640686	.	-	.	ID=Cattle_Y_E00530;Parent=Cattle_Y_T00434;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00434;gene_id=Cattle_Y_G00305;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	17641469	17641863	.	-	.	ID=Cattle_Y_E00531;Parent=Cattle_Y_T00434;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00434;gene_id=Cattle_Y_G00305;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	17641946	17642009	.	-	.	ID=Cattle_Y_E00532;Parent=Cattle_Y_T00434;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00434;gene_id=Cattle_Y_G00305;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	17639881	17639958	.	-	0	ID=Cattle_Y_C00431;Parent=Cattle_Y_T00434;gene_id=Cattle_Y_G00305;transcript_id=Cattle_Y_T00434;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	17640075	17640220	.	-	2	ID=Cattle_Y_C00432;Parent=Cattle_Y_T00434;gene_id=Cattle_Y_G00305;transcript_id=Cattle_Y_T00434;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	17640314	17640427	.	-	2	ID=Cattle_Y_C00433;Parent=Cattle_Y_T00434;gene_id=Cattle_Y_G00305;transcript_id=Cattle_Y_T00434;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	17640611	17640686	.	-	0	ID=Cattle_Y_C00434;Parent=Cattle_Y_T00434;gene_id=Cattle_Y_G00305;transcript_id=Cattle_Y_T00434;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	17641469	17641863	.	-	2	ID=Cattle_Y_C00435;Parent=Cattle_Y_T00434;gene_id=Cattle_Y_G00305;transcript_id=Cattle_Y_T00434;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	17641946	17642009	.	-	0	ID=Cattle_Y_C00436;Parent=Cattle_Y_T00434;gene_id=Cattle_Y_G00305;transcript_id=Cattle_Y_T00434;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	17669914	17670651	.	+	.	ID=Cattle_Y_G00306;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00306;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	17669914	17670651	.	+	.	ID=Cattle_Y_T00435;Parent=Cattle_Y_G00306;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00306;transcript_id=Cattle_Y_T00435;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	17676753	17687794	.	+	.	ID=Cattle_Y_G00307;Dbxref=GeneID:132344704;Name=LOC132344704;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344704;gene_biotype=protein_coding;gene_id=Cattle_Y_G00307;source_id=gene-LOC132344704
haplotype2-0000357	CAT	mRNA	17676753	17687794	.	+	.	ID=Cattle_Y_T00436;Parent=Cattle_Y_G00307;Dbxref=GeneID:132344704,GenBank:XM_059884347.1;Name=XM_059884347.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344704;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=zinc finger protein 280B-like%2C transcript variant X1;transcript_id=Cattle_Y_T00436;gene_id=Cattle_Y_G00307;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884347.1
haplotype2-0000357	CAT	exon	17676753	17676887	.	+	.	ID=Cattle_Y_E00533;Parent=Cattle_Y_T00436;Dbxref=GeneID:132344704,GenBank:XM_059884347.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344704;product=zinc finger protein 280B-like, transcript variant X1;transcript_id=Cattle_Y_T00436;gene_id=Cattle_Y_G00307;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884347.1-1
haplotype2-0000357	CAT	exon	17685988	17687794	.	+	.	ID=Cattle_Y_E00534;Parent=Cattle_Y_T00436;Dbxref=GeneID:132344704,GenBank:XM_059884347.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344704;product=zinc finger protein 280B-like, transcript variant X1;transcript_id=Cattle_Y_T00436;gene_id=Cattle_Y_G00307;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884347.1-2
haplotype2-0000357	CAT	CDS	17686059	17687689	.	+	0	ID=Cattle_Y_C00437;Parent=Cattle_Y_T00436;Dbxref=GeneID:132344704,GenBank:XP_059740330.1;Name=XP_059740330.1;gbkey=CDS;gene=LOC132344704;product=zinc finger protein 280B-like;protein_id=XP_059740330.1_3;gene_id=Cattle_Y_G00307;transcript_id=Cattle_Y_T00436;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	17676753	17687794	.	+	.	ID=Cattle_Y_T00437;Parent=Cattle_Y_G00307;Dbxref=GeneID:132344704,GenBank:XM_059884348.1;Name=XM_059884348.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344704;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=zinc finger protein 280B-like%2C transcript variant X2;transcript_id=Cattle_Y_T00437;gene_id=Cattle_Y_G00307;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884348.1
haplotype2-0000357	CAT	exon	17676753	17676845	.	+	.	ID=Cattle_Y_E00535;Parent=Cattle_Y_T00437;Dbxref=GeneID:132344704,GenBank:XM_059884348.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344704;product=zinc finger protein 280B-like, transcript variant X2;transcript_id=Cattle_Y_T00437;gene_id=Cattle_Y_G00307;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884348.1-1
haplotype2-0000357	CAT	exon	17685988	17687794	.	+	.	ID=Cattle_Y_E00536;Parent=Cattle_Y_T00437;Dbxref=GeneID:132344704,GenBank:XM_059884348.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344704;product=zinc finger protein 280B-like, transcript variant X2;transcript_id=Cattle_Y_T00437;gene_id=Cattle_Y_G00307;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884348.1-2
haplotype2-0000357	CAT	CDS	17686059	17687689	.	+	0	ID=Cattle_Y_C00438;Parent=Cattle_Y_T00437;Dbxref=GeneID:132344704,GenBank:XP_059740331.1;Name=XP_059740331.1;gbkey=CDS;gene=LOC132344704;product=zinc finger protein 280B-like;protein_id=XP_059740331.1_3;gene_id=Cattle_Y_G00307;transcript_id=Cattle_Y_T00437;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	17692069	17692596	.	+	.	ID=Cattle_Y_G00308;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00308;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	17692069	17692596	.	+	.	ID=Cattle_Y_T00438;Parent=Cattle_Y_G00308;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00438;gene_id=Cattle_Y_G00308;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	17692069	17692192	.	+	.	ID=Cattle_Y_E00537;Parent=Cattle_Y_T00438;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00438;gene_id=Cattle_Y_G00308;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	17692265	17692596	.	+	.	ID=Cattle_Y_E00538;Parent=Cattle_Y_T00438;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00438;gene_id=Cattle_Y_G00308;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	17692069	17692192	.	+	0	ID=Cattle_Y_C00439;Parent=Cattle_Y_T00438;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_25;gene_id=Cattle_Y_G00308;transcript_id=Cattle_Y_T00438;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	17692265	17692596	.	+	2	ID=Cattle_Y_C00440;Parent=Cattle_Y_T00438;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_25;gene_id=Cattle_Y_G00308;transcript_id=Cattle_Y_T00438;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	17718349	17718890	.	-	.	ID=Cattle_Y_G00309;Dbxref=GeneID:132344657;Name=LOC132344657;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344657;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00309;source_id=gene-LOC132344657
haplotype2-0000357	CAT	mRNA	17718349	17718890	.	-	.	ID=Cattle_Y_T00439;Parent=Cattle_Y_G00309;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;Name=XM_059884302.1;gbkey=mRNA;gene=LOC132344657;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00439;gene_id=Cattle_Y_G00309;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884302.1
haplotype2-0000357	CAT	exon	17718349	17718701	.	-	.	ID=Cattle_Y_E00539;Parent=Cattle_Y_T00439;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00439;gene_id=Cattle_Y_G00309;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-2
haplotype2-0000357	CAT	exon	17718765	17718890	.	-	.	ID=Cattle_Y_E00540;Parent=Cattle_Y_T00439;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00439;gene_id=Cattle_Y_G00309;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-1
haplotype2-0000357	CAT	CDS	17718349	17718572	.	-	0	ID=Cattle_Y_C00441;Parent=Cattle_Y_T00439;Dbxref=GeneID:132344657,GenBank:XP_059740285.1;Name=XP_059740285.1;gbkey=CDS;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740285.1_22;gene_id=Cattle_Y_G00309;transcript_id=Cattle_Y_T00439;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	17802071	17804524	.	+	.	ID=Cattle_Y_G00310;Dbxref=GeneID:132344551;Name=LOC132344551;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344551;gene_biotype=protein_coding;gene_id=Cattle_Y_G00310;source_id=gene-LOC132344551
haplotype2-0000357	CAT	mRNA	17802071	17804524	.	+	.	ID=Cattle_Y_T00440;Parent=Cattle_Y_G00310;Dbxref=GeneID:132344551,GenBank:XM_059884233.1;Name=XM_059884233.1;gbkey=mRNA;gene=LOC132344551;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 67%25 coverage of the annotated genomic feature by RNAseq alignments;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00440;gene_id=Cattle_Y_G00310;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884233.1
haplotype2-0000357	CAT	exon	17802071	17802700	.	+	.	ID=Cattle_Y_E00541;Parent=Cattle_Y_T00440;Dbxref=GeneID:132344551,GenBank:XM_059884233.1;gbkey=mRNA;gene=LOC132344551;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00440;gene_id=Cattle_Y_G00310;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884233.1-1
haplotype2-0000357	CAT	exon	17803131	17803705	.	+	.	ID=Cattle_Y_E00542;Parent=Cattle_Y_T00440;Dbxref=GeneID:132344551,GenBank:XM_059884233.1;gbkey=mRNA;gene=LOC132344551;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00440;gene_id=Cattle_Y_G00310;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884233.1-2
haplotype2-0000357	CAT	exon	17804506	17804524	.	+	.	ID=Cattle_Y_E00543;Parent=Cattle_Y_T00440;Dbxref=GeneID:132344551,GenBank:XM_059884233.1;gbkey=mRNA;gene=LOC132344551;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00440;gene_id=Cattle_Y_G00310;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884233.1-3
haplotype2-0000357	CAT	CDS	17802191	17802700	.	+	0	ID=Cattle_Y_C00442;Parent=Cattle_Y_T00440;Dbxref=GeneID:132344551,GenBank:XP_059740216.1;Name=XP_059740216.1;gbkey=CDS;gene=LOC132344551;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740216.1;gene_id=Cattle_Y_G00310;transcript_id=Cattle_Y_T00440;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	17803131	17803705	.	+	0	ID=Cattle_Y_C00443;Parent=Cattle_Y_T00440;Dbxref=GeneID:132344551,GenBank:XP_059740216.1;Name=XP_059740216.1;gbkey=CDS;gene=LOC132344551;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740216.1;gene_id=Cattle_Y_G00310;transcript_id=Cattle_Y_T00440;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	17804506	17804524	.	+	1	ID=Cattle_Y_C00444;Parent=Cattle_Y_T00440;Dbxref=GeneID:132344551,GenBank:XP_059740216.1;Name=XP_059740216.1;gbkey=CDS;gene=LOC132344551;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740216.1;gene_id=Cattle_Y_G00310;transcript_id=Cattle_Y_T00440;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	17916630	18102963	.	-	.	ID=Cattle_Y_G00311;Dbxref=GeneID:132344552;Name=LOC132344552;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344552;gene_biotype=protein_coding;gene_id=Cattle_Y_G00311;source_id=gene-LOC132344552
haplotype2-0000357	CAT	mRNA	17916630	18102963	.	-	.	ID=Cattle_Y_T00441;Parent=Cattle_Y_G00311;Dbxref=GeneID:132344552,GenBank:XM_059884234.1;Name=XM_059884234.1;gbkey=mRNA;gene=LOC132344552;model_evidence=Supporting evidence includes similarity to: 97%25 coverage of the annotated genomic feature by RNAseq alignments;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00441;gene_id=Cattle_Y_G00311;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884234.1
haplotype2-0000357	CAT	exon	17916630	17916647	.	-	.	ID=Cattle_Y_E00544;Parent=Cattle_Y_T00441;Dbxref=GeneID:132344552,GenBank:XM_059884234.1;gbkey=mRNA;gene=LOC132344552;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00441;gene_id=Cattle_Y_G00311;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884234.1-3
haplotype2-0000357	CAT	exon	18101391	18101903	.	-	.	ID=Cattle_Y_E00545;Parent=Cattle_Y_T00441;Dbxref=GeneID:132344552,GenBank:XM_059884234.1;gbkey=mRNA;gene=LOC132344552;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00441;gene_id=Cattle_Y_G00311;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884234.1-3
haplotype2-0000357	CAT	exon	18102334	18102963	.	-	.	ID=Cattle_Y_E00546;Parent=Cattle_Y_T00441;Dbxref=GeneID:132344552,GenBank:XM_059884234.1;gbkey=mRNA;gene=LOC132344552;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00441;gene_id=Cattle_Y_G00311;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884234.1-1
haplotype2-0000357	CAT	CDS	17916630	17916647	.	-	0	ID=Cattle_Y_C00445;Parent=Cattle_Y_T00441;gene_id=Cattle_Y_G00311;transcript_id=Cattle_Y_T00441;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	18101391	18101903	.	-	0	ID=Cattle_Y_C00446;Parent=Cattle_Y_T00441;gene_id=Cattle_Y_G00311;transcript_id=Cattle_Y_T00441;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	18102334	18102843	.	-	0	ID=Cattle_Y_C00447;Parent=Cattle_Y_T00441;gene_id=Cattle_Y_G00311;transcript_id=Cattle_Y_T00441;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	18178526	18179100	.	+	.	ID=Cattle_Y_G00312;Dbxref=GeneID:132344660;Name=LOC132344660;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344660;gene_biotype=likely_pseudogene;partial=true;start_range=.,24728184;gene_id=Cattle_Y_G00312;source_id=gene-LOC132344660
haplotype2-0000357	CAT	mRNA	18178526	18179100	.	+	.	ID=Cattle_Y_T00442;Parent=Cattle_Y_G00312;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;Name=XM_059884305.1;gbkey=mRNA;gene=LOC132344660;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00442;gene_id=Cattle_Y_G00312;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884305.1
haplotype2-0000357	CAT	exon	18178526	18178651	.	+	.	ID=Cattle_Y_E00547;Parent=Cattle_Y_T00442;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00442;gene_id=Cattle_Y_G00312;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-1
haplotype2-0000357	CAT	exon	18178715	18179100	.	+	.	ID=Cattle_Y_E00548;Parent=Cattle_Y_T00442;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00442;gene_id=Cattle_Y_G00312;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-2
haplotype2-0000357	CAT	CDS	18178844	18179100	.	+	0	ID=Cattle_Y_C00448;Parent=Cattle_Y_T00442;Dbxref=GeneID:132344660,GenBank:XP_059740288.1;Name=XP_059740288.1;gbkey=CDS;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740288.1_10;start_range=.,24728184;gene_id=Cattle_Y_G00312;transcript_id=Cattle_Y_T00442;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	18212147	18212674	.	-	.	ID=Cattle_Y_G00313;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00313;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	18212147	18212674	.	-	.	ID=Cattle_Y_T00443;Parent=Cattle_Y_G00313;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00443;gene_id=Cattle_Y_G00313;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	18212147	18212478	.	-	.	ID=Cattle_Y_E00549;Parent=Cattle_Y_T00443;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00443;gene_id=Cattle_Y_G00313;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	exon	18212551	18212674	.	-	.	ID=Cattle_Y_E00550;Parent=Cattle_Y_T00443;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00443;gene_id=Cattle_Y_G00313;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	CDS	18212147	18212478	.	-	2	ID=Cattle_Y_C00449;Parent=Cattle_Y_T00443;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_32;gene_id=Cattle_Y_G00313;transcript_id=Cattle_Y_T00443;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	18212551	18212674	.	-	0	ID=Cattle_Y_C00450;Parent=Cattle_Y_T00443;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_32;gene_id=Cattle_Y_G00313;transcript_id=Cattle_Y_T00443;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	18216955	18227985	.	-	.	ID=Cattle_Y_G00314;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00314;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	18216955	18227985	.	-	.	ID=Cattle_Y_T00444;Parent=Cattle_Y_G00314;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00444;gene_id=Cattle_Y_G00314;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	18216955	18218762	.	-	.	ID=Cattle_Y_E00551;Parent=Cattle_Y_T00444;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00444;gene_id=Cattle_Y_G00314;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	exon	18227858	18227985	.	-	.	ID=Cattle_Y_E00552;Parent=Cattle_Y_T00444;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00444;gene_id=Cattle_Y_G00314;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	CDS	18217060	18218691	.	-	0	ID=Cattle_Y_C00451;Parent=Cattle_Y_T00444;gene_id=Cattle_Y_G00314;transcript_id=Cattle_Y_T00444;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	18262752	18264875	.	+	.	ID=Cattle_Y_G00315;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00315;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	18262752	18264875	.	+	.	ID=Cattle_Y_T00445;Parent=Cattle_Y_G00315;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00445;gene_id=Cattle_Y_G00315;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	18262752	18262815	.	+	.	ID=Cattle_Y_E00553;Parent=Cattle_Y_T00445;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00445;gene_id=Cattle_Y_G00315;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	exon	18262898	18263292	.	+	.	ID=Cattle_Y_E00554;Parent=Cattle_Y_T00445;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00445;gene_id=Cattle_Y_G00315;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	18264068	18264143	.	+	.	ID=Cattle_Y_E00555;Parent=Cattle_Y_T00445;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00445;gene_id=Cattle_Y_G00315;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	18264327	18264440	.	+	.	ID=Cattle_Y_E00556;Parent=Cattle_Y_T00445;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00445;gene_id=Cattle_Y_G00315;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	18264536	18264681	.	+	.	ID=Cattle_Y_E00557;Parent=Cattle_Y_T00445;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00445;gene_id=Cattle_Y_G00315;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	18264798	18264875	.	+	.	ID=Cattle_Y_E00558;Parent=Cattle_Y_T00445;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00445;gene_id=Cattle_Y_G00315;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	CDS	18263020	18263292	.	+	0	ID=Cattle_Y_C00452;Parent=Cattle_Y_T00445;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_37;gene_id=Cattle_Y_G00315;transcript_id=Cattle_Y_T00445;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	18264068	18264143	.	+	0	ID=Cattle_Y_C00453;Parent=Cattle_Y_T00445;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_37;gene_id=Cattle_Y_G00315;transcript_id=Cattle_Y_T00445;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	18264327	18264440	.	+	2	ID=Cattle_Y_C00454;Parent=Cattle_Y_T00445;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_37;gene_id=Cattle_Y_G00315;transcript_id=Cattle_Y_T00445;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	18264536	18264681	.	+	2	ID=Cattle_Y_C00455;Parent=Cattle_Y_T00445;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_37;gene_id=Cattle_Y_G00315;transcript_id=Cattle_Y_T00445;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	18264798	18264875	.	+	0	ID=Cattle_Y_C00456;Parent=Cattle_Y_T00445;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_37;gene_id=Cattle_Y_G00315;transcript_id=Cattle_Y_T00445;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	18273977	18305038	.	-	.	ID=Cattle_Y_G00316;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00316;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	18273977	18305038	.	-	.	ID=Cattle_Y_T00446;Parent=Cattle_Y_G00316;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00446;gene_id=Cattle_Y_G00316;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	18273977	18275804	.	-	.	ID=Cattle_Y_E00559;Parent=Cattle_Y_T00446;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00446;gene_id=Cattle_Y_G00316;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	exon	18304899	18305038	.	-	.	ID=Cattle_Y_E00560;Parent=Cattle_Y_T00446;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00446;gene_id=Cattle_Y_G00316;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	CDS	18273977	18275577	.	-	0	ID=Cattle_Y_C00457;Parent=Cattle_Y_T00446;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_23;gene_id=Cattle_Y_G00316;transcript_id=Cattle_Y_T00446;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	18402272	18404432	.	-	.	ID=Cattle_Y_G00317;Dbxref=GeneID:132344655;Name=LOC132344655;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344655;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00317;source_id=gene-LOC132344655
haplotype2-0000357	CAT	exon	18402272	18402349	.	-	.	ID=Cattle_Y_T00447;Parent=Cattle_Y_G00317;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00317;transcript_id=Cattle_Y_T00447;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655
haplotype2-0000357	CAT	exon	18402466	18402611	.	-	.	ID=Cattle_Y_T00448;Parent=Cattle_Y_G00317;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00317;transcript_id=Cattle_Y_T00448;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-2
haplotype2-0000357	CAT	exon	18402707	18402818	.	-	.	ID=Cattle_Y_T00449;Parent=Cattle_Y_G00317;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00317;transcript_id=Cattle_Y_T00449;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-3
haplotype2-0000357	CAT	exon	18403002	18403079	.	-	.	ID=Cattle_Y_T00450;Parent=Cattle_Y_G00317;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00317;transcript_id=Cattle_Y_T00450;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-4
haplotype2-0000357	CAT	exon	18403883	18404277	.	-	.	ID=Cattle_Y_T00451;Parent=Cattle_Y_G00317;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00317;transcript_id=Cattle_Y_T00451;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-5
haplotype2-0000357	CAT	exon	18404360	18404432	.	-	.	ID=Cattle_Y_T00452;Parent=Cattle_Y_G00317;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00317;transcript_id=Cattle_Y_T00452;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-6
haplotype2-0000357	CAT	gene	18495600	18496322	.	-	.	ID=Cattle_Y_G00318;Dbxref=GeneID:132344685;Name=LOC132344685;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344685;gene_biotype=protein_coding;partial=true;start_range=.,33040068;gene_id=Cattle_Y_G00318;source_id=gene-LOC132344685
haplotype2-0000357	CAT	mRNA	18495600	18496322	.	-	.	ID=Cattle_Y_T00453;Parent=Cattle_Y_G00318;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;Name=XM_059884326.1;gbkey=mRNA;gene=LOC132344685;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 42%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00453;gene_id=Cattle_Y_G00318;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884326.1
haplotype2-0000357	CAT	exon	18495600	18496322	.	-	.	ID=Cattle_Y_E00561;Parent=Cattle_Y_T00453;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;gbkey=mRNA;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00453;gene_id=Cattle_Y_G00318;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884326.1-1
haplotype2-0000357	CAT	CDS	18495600	18496202	.	-	0	ID=Cattle_Y_C00458;Parent=Cattle_Y_T00453;Dbxref=GeneID:132344685,GenBank:XP_059740309.1;Name=XP_059740309.1;gbkey=CDS;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740309.1_2;start_range=.,33040068;gene_id=Cattle_Y_G00318;transcript_id=Cattle_Y_T00453;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	18587633	18588355	.	+	.	ID=Cattle_Y_G00319;Dbxref=GeneID:132344685;Name=LOC132344685;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344685;gene_biotype=protein_coding;partial=true;start_range=.,33040068;gene_id=Cattle_Y_G00319;source_id=gene-LOC132344685
haplotype2-0000357	CAT	mRNA	18587633	18588355	.	+	.	ID=Cattle_Y_T00454;Parent=Cattle_Y_G00319;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;Name=XM_059884326.1;gbkey=mRNA;gene=LOC132344685;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 42%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00454;gene_id=Cattle_Y_G00319;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884326.1
haplotype2-0000357	CAT	exon	18587633	18588355	.	+	.	ID=Cattle_Y_E00562;Parent=Cattle_Y_T00454;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;gbkey=mRNA;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00454;gene_id=Cattle_Y_G00319;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884326.1-1
haplotype2-0000357	CAT	CDS	18587753	18588355	.	+	0	ID=Cattle_Y_C00459;Parent=Cattle_Y_T00454;Dbxref=GeneID:132344685,GenBank:XP_059740309.1;Name=XP_059740309.1;gbkey=CDS;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740309.1_8;start_range=.,33040068;gene_id=Cattle_Y_G00319;transcript_id=Cattle_Y_T00454;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	18631726	18632451	.	-	.	ID=Cattle_Y_G00320;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00320;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	18638929	18639651	.	+	.	ID=Cattle_Y_G00321;Dbxref=GeneID:132344685;Name=LOC132344685;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344685;gene_biotype=protein_coding;partial=true;start_range=.,33040068;gene_id=Cattle_Y_G00321;source_id=gene-LOC132344685
haplotype2-0000357	CAT	mRNA	18638929	18639651	.	+	.	ID=Cattle_Y_T00455;Parent=Cattle_Y_G00321;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;Name=XM_059884326.1;gbkey=mRNA;gene=LOC132344685;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 42%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00455;gene_id=Cattle_Y_G00321;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884326.1
haplotype2-0000357	CAT	exon	18638929	18639651	.	+	.	ID=Cattle_Y_E00563;Parent=Cattle_Y_T00455;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;gbkey=mRNA;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00455;gene_id=Cattle_Y_G00321;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884326.1-1
haplotype2-0000357	CAT	CDS	18639049	18639651	.	+	0	ID=Cattle_Y_C00460;Parent=Cattle_Y_T00455;Dbxref=GeneID:132344685,GenBank:XP_059740309.1;Name=XP_059740309.1;gbkey=CDS;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740309.1_13;start_range=.,33040068;gene_id=Cattle_Y_G00321;transcript_id=Cattle_Y_T00455;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	18683160	18683885	.	-	.	ID=Cattle_Y_G00322;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00322;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	18783633	18786618	.	+	.	ID=Cattle_Y_G00323;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00323;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	18882847	18914001	.	+	.	ID=Cattle_Y_G00324;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00324;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	18882847	18914001	.	+	.	ID=Cattle_Y_T00456;Parent=Cattle_Y_G00324;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00456;gene_id=Cattle_Y_G00324;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	18882847	18882986	.	+	.	ID=Cattle_Y_E00564;Parent=Cattle_Y_T00456;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00456;gene_id=Cattle_Y_G00324;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	18912173	18914001	.	+	.	ID=Cattle_Y_E00565;Parent=Cattle_Y_T00456;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00456;gene_id=Cattle_Y_G00324;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	18913454	18914001	.	+	0	ID=Cattle_Y_C00461;Parent=Cattle_Y_T00456;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_19;gene_id=Cattle_Y_G00324;transcript_id=Cattle_Y_T00456;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	18923103	18925224	.	-	.	ID=Cattle_Y_G00325;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00325;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	18923103	18925224	.	-	.	ID=Cattle_Y_T00457;Parent=Cattle_Y_G00325;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00457;gene_id=Cattle_Y_G00325;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	18923103	18923180	.	-	.	ID=Cattle_Y_E00566;Parent=Cattle_Y_T00457;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00457;gene_id=Cattle_Y_G00325;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	18923297	18923442	.	-	.	ID=Cattle_Y_E00567;Parent=Cattle_Y_T00457;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00457;gene_id=Cattle_Y_G00325;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	18923538	18923651	.	-	.	ID=Cattle_Y_E00568;Parent=Cattle_Y_T00457;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00457;gene_id=Cattle_Y_G00325;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	18923835	18923910	.	-	.	ID=Cattle_Y_E00569;Parent=Cattle_Y_T00457;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00457;gene_id=Cattle_Y_G00325;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	18924684	18925078	.	-	.	ID=Cattle_Y_E00570;Parent=Cattle_Y_T00457;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00457;gene_id=Cattle_Y_G00325;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	18925161	18925224	.	-	.	ID=Cattle_Y_E00571;Parent=Cattle_Y_T00457;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00457;gene_id=Cattle_Y_G00325;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	18923103	18923180	.	-	0	ID=Cattle_Y_C00462;Parent=Cattle_Y_T00457;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_33;gene_id=Cattle_Y_G00325;transcript_id=Cattle_Y_T00457;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	18923297	18923442	.	-	2	ID=Cattle_Y_C00463;Parent=Cattle_Y_T00457;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_33;gene_id=Cattle_Y_G00325;transcript_id=Cattle_Y_T00457;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	18923538	18923651	.	-	2	ID=Cattle_Y_C00464;Parent=Cattle_Y_T00457;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_33;gene_id=Cattle_Y_G00325;transcript_id=Cattle_Y_T00457;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	18923835	18923910	.	-	0	ID=Cattle_Y_C00465;Parent=Cattle_Y_T00457;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_33;gene_id=Cattle_Y_G00325;transcript_id=Cattle_Y_T00457;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	18924684	18924956	.	-	0	ID=Cattle_Y_C00466;Parent=Cattle_Y_T00457;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_33;gene_id=Cattle_Y_G00325;transcript_id=Cattle_Y_T00457;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	18953143	18953880	.	+	.	ID=Cattle_Y_G00326;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00326;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	18953143	18953880	.	+	.	ID=Cattle_Y_T00458;Parent=Cattle_Y_G00326;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00326;transcript_id=Cattle_Y_T00458;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	18959990	18971024	.	+	.	ID=Cattle_Y_G00327;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00327;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	18959990	18971024	.	+	.	ID=Cattle_Y_T00459;Parent=Cattle_Y_G00327;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00459;gene_id=Cattle_Y_G00327;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	18959990	18960117	.	+	.	ID=Cattle_Y_E00572;Parent=Cattle_Y_T00459;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00459;gene_id=Cattle_Y_G00327;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	exon	18969217	18971024	.	+	.	ID=Cattle_Y_E00573;Parent=Cattle_Y_T00459;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00459;gene_id=Cattle_Y_G00327;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-2
haplotype2-0000357	CAT	CDS	18969288	18970919	.	+	0	ID=Cattle_Y_C00467;Parent=Cattle_Y_T00459;Dbxref=GeneID:768254,GenBank:NP_001071588.1,BGD:BT17804;Name=NP_001071588.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ZNF280BY;inference=similar to AA sequence (same species):RefSeq:NP_001071588.1;product=zinc finger protein 280B;protein_id=NP_001071588.1;gene_id=Cattle_Y_G00327;transcript_id=Cattle_Y_T00459;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	18975348	18975875	.	+	.	ID=Cattle_Y_G00328;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00328;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	18975348	18975875	.	+	.	ID=Cattle_Y_T00460;Parent=Cattle_Y_G00328;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00460;gene_id=Cattle_Y_G00328;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	18975348	18975471	.	+	.	ID=Cattle_Y_E00574;Parent=Cattle_Y_T00460;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00460;gene_id=Cattle_Y_G00328;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	18975544	18975875	.	+	.	ID=Cattle_Y_E00575;Parent=Cattle_Y_T00460;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00460;gene_id=Cattle_Y_G00328;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	18975348	18975471	.	+	0	ID=Cattle_Y_C00468;Parent=Cattle_Y_T00460;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_12;gene_id=Cattle_Y_G00328;transcript_id=Cattle_Y_T00460;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	18975544	18975875	.	+	2	ID=Cattle_Y_C00469;Parent=Cattle_Y_T00460;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_12;gene_id=Cattle_Y_G00328;transcript_id=Cattle_Y_T00460;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	19045283	19047133	.	-	.	ID=Cattle_Y_G00329;Dbxref=BGD:BT13513,GeneID:767933;Name=HSFY2;description=heat shock transcription factor%2C Y-linked 2;gbkey=Gene;gene=HSFY2;gene_biotype=protein_coding;gene_id=Cattle_Y_G00329;source_id=gene-HSFY2
haplotype2-0000357	CAT	mRNA	19045283	19047133	.	-	.	ID=Cattle_Y_T00461;Parent=Cattle_Y_G00329;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;Name=NM_001077006.1;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor%2C Y-linked 2;transcript_id=Cattle_Y_T00461;gene_id=Cattle_Y_G00329;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001077006.1
haplotype2-0000357	CAT	exon	19045283	19046096	.	-	.	ID=Cattle_Y_E00576;Parent=Cattle_Y_T00461;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;transcript_id=Cattle_Y_T00461;gene_id=Cattle_Y_G00329;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001077006.1-2
haplotype2-0000357	CAT	exon	19046527	19047133	.	-	.	ID=Cattle_Y_E00577;Parent=Cattle_Y_T00461;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;transcript_id=Cattle_Y_T00461;gene_id=Cattle_Y_G00329;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001077006.1-1
haplotype2-0000357	CAT	CDS	19045353	19046096	.	-	0	ID=Cattle_Y_C00470;Parent=Cattle_Y_T00461;Dbxref=GeneID:767933,GenBank:NP_001070474.1,BGD:BT13513;Name=NP_001070474.1;gbkey=CDS;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;protein_id=NP_001070474.1_3;gene_id=Cattle_Y_G00329;transcript_id=Cattle_Y_T00461;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	19046527	19047036	.	-	0	ID=Cattle_Y_C00471;Parent=Cattle_Y_T00461;Dbxref=GeneID:767933,GenBank:NP_001070474.1,BGD:BT13513;Name=NP_001070474.1;gbkey=CDS;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;protein_id=NP_001070474.1_3;gene_id=Cattle_Y_G00329;transcript_id=Cattle_Y_T00461;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	19131238	19131966	.	-	.	ID=Cattle_Y_G00330;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00330;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	19138498	19139220	.	+	.	ID=Cattle_Y_G00331;Dbxref=GeneID:132344685;Name=LOC132344685;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344685;gene_biotype=protein_coding;partial=true;start_range=.,33040068;gene_id=Cattle_Y_G00331;source_id=gene-LOC132344685
haplotype2-0000357	CAT	mRNA	19138498	19139220	.	+	.	ID=Cattle_Y_T00462;Parent=Cattle_Y_G00331;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;Name=XM_059884326.1;gbkey=mRNA;gene=LOC132344685;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 42%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00462;gene_id=Cattle_Y_G00331;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884326.1
haplotype2-0000357	CAT	exon	19138498	19139220	.	+	.	ID=Cattle_Y_E00578;Parent=Cattle_Y_T00462;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;gbkey=mRNA;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00462;gene_id=Cattle_Y_G00331;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884326.1-1
haplotype2-0000357	CAT	CDS	19138618	19139220	.	+	0	ID=Cattle_Y_C00472;Parent=Cattle_Y_T00462;Dbxref=GeneID:132344685,GenBank:XP_059740309.1;Name=XP_059740309.1;gbkey=CDS;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740309.1_1;start_range=.,33040068;gene_id=Cattle_Y_G00331;transcript_id=Cattle_Y_T00462;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	19209726	19210253	.	-	.	ID=Cattle_Y_G00332;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00332;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	19209726	19210253	.	-	.	ID=Cattle_Y_T00463;Parent=Cattle_Y_G00332;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00463;gene_id=Cattle_Y_G00332;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	19209726	19210057	.	-	.	ID=Cattle_Y_E00579;Parent=Cattle_Y_T00463;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00463;gene_id=Cattle_Y_G00332;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	exon	19210130	19210253	.	-	.	ID=Cattle_Y_E00580;Parent=Cattle_Y_T00463;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00463;gene_id=Cattle_Y_G00332;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	CDS	19209726	19210057	.	-	2	ID=Cattle_Y_C00473;Parent=Cattle_Y_T00463;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_39;gene_id=Cattle_Y_G00332;transcript_id=Cattle_Y_T00463;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	19210130	19210253	.	-	0	ID=Cattle_Y_C00474;Parent=Cattle_Y_T00463;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_39;gene_id=Cattle_Y_G00332;transcript_id=Cattle_Y_T00463;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	19214577	19225617	.	-	.	ID=Cattle_Y_G00333;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00333;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	19214577	19225617	.	-	.	ID=Cattle_Y_T00464;Parent=Cattle_Y_G00333;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00464;gene_id=Cattle_Y_G00333;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	19214577	19216384	.	-	.	ID=Cattle_Y_E00581;Parent=Cattle_Y_T00464;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00464;gene_id=Cattle_Y_G00333;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-2
haplotype2-0000357	CAT	exon	19225490	19225617	.	-	.	ID=Cattle_Y_E00582;Parent=Cattle_Y_T00464;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00464;gene_id=Cattle_Y_G00333;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	CDS	19214682	19216313	.	-	0	ID=Cattle_Y_C00475;Parent=Cattle_Y_T00464;Dbxref=GeneID:768254,GenBank:NP_001071588.1,BGD:BT17804;Name=NP_001071588.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ZNF280BY;inference=similar to AA sequence (same species):RefSeq:NP_001071588.1;product=zinc finger protein 280B;protein_id=NP_001071588.1_5;gene_id=Cattle_Y_G00333;transcript_id=Cattle_Y_T00464;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	19260378	19262501	.	+	.	ID=Cattle_Y_G00334;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00334;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	19260378	19262501	.	+	.	ID=Cattle_Y_T00465;Parent=Cattle_Y_G00334;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00465;gene_id=Cattle_Y_G00334;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	19260378	19260441	.	+	.	ID=Cattle_Y_E00583;Parent=Cattle_Y_T00465;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00465;gene_id=Cattle_Y_G00334;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	exon	19260524	19260918	.	+	.	ID=Cattle_Y_E00584;Parent=Cattle_Y_T00465;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00465;gene_id=Cattle_Y_G00334;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	19261694	19261769	.	+	.	ID=Cattle_Y_E00585;Parent=Cattle_Y_T00465;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00465;gene_id=Cattle_Y_G00334;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	19261953	19262066	.	+	.	ID=Cattle_Y_E00586;Parent=Cattle_Y_T00465;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00465;gene_id=Cattle_Y_G00334;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	19262162	19262307	.	+	.	ID=Cattle_Y_E00587;Parent=Cattle_Y_T00465;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00465;gene_id=Cattle_Y_G00334;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	19262424	19262501	.	+	.	ID=Cattle_Y_E00588;Parent=Cattle_Y_T00465;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00465;gene_id=Cattle_Y_G00334;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	CDS	19260646	19260918	.	+	0	ID=Cattle_Y_C00476;Parent=Cattle_Y_T00465;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_22;gene_id=Cattle_Y_G00334;transcript_id=Cattle_Y_T00465;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	19261694	19261769	.	+	0	ID=Cattle_Y_C00477;Parent=Cattle_Y_T00465;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_22;gene_id=Cattle_Y_G00334;transcript_id=Cattle_Y_T00465;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	19261953	19262066	.	+	2	ID=Cattle_Y_C00478;Parent=Cattle_Y_T00465;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_22;gene_id=Cattle_Y_G00334;transcript_id=Cattle_Y_T00465;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	19262162	19262307	.	+	2	ID=Cattle_Y_C00479;Parent=Cattle_Y_T00465;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_22;gene_id=Cattle_Y_G00334;transcript_id=Cattle_Y_T00465;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	19262424	19262501	.	+	0	ID=Cattle_Y_C00480;Parent=Cattle_Y_T00465;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_22;gene_id=Cattle_Y_G00334;transcript_id=Cattle_Y_T00465;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	19271598	19302612	.	-	.	ID=Cattle_Y_G00335;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00335;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	19271598	19302612	.	-	.	ID=Cattle_Y_T00466;Parent=Cattle_Y_G00335;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00466;gene_id=Cattle_Y_G00335;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	19271598	19273423	.	-	.	ID=Cattle_Y_E00589;Parent=Cattle_Y_T00466;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00466;gene_id=Cattle_Y_G00335;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	exon	19302473	19302612	.	-	.	ID=Cattle_Y_E00590;Parent=Cattle_Y_T00466;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00466;gene_id=Cattle_Y_G00335;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	CDS	19271598	19273196	.	-	0	ID=Cattle_Y_C00481;Parent=Cattle_Y_T00466;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_33;gene_id=Cattle_Y_G00335;transcript_id=Cattle_Y_T00466;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	19398948	19401941	.	-	.	ID=Cattle_Y_G00336;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00336;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	19503696	19504419	.	+	.	ID=Cattle_Y_G00337;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00337;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	19581020	19581743	.	-	.	ID=Cattle_Y_G00338;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00338;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	19682263	19684410	.	+	.	ID=Cattle_Y_G00339;Dbxref=GeneID:132344655;Name=LOC132344655;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344655;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00339;source_id=gene-LOC132344655
haplotype2-0000357	CAT	exon	19682263	19682335	.	+	.	ID=Cattle_Y_T00467;Parent=Cattle_Y_G00339;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00339;transcript_id=Cattle_Y_T00467;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-6
haplotype2-0000357	CAT	exon	19682418	19682812	.	+	.	ID=Cattle_Y_T00468;Parent=Cattle_Y_G00339;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00339;transcript_id=Cattle_Y_T00468;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-5
haplotype2-0000357	CAT	exon	19683604	19683680	.	+	.	ID=Cattle_Y_T00469;Parent=Cattle_Y_G00339;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00339;transcript_id=Cattle_Y_T00469;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-4
haplotype2-0000357	CAT	exon	19683864	19683975	.	+	.	ID=Cattle_Y_T00470;Parent=Cattle_Y_G00339;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00339;transcript_id=Cattle_Y_T00470;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-3
haplotype2-0000357	CAT	exon	19684071	19684216	.	+	.	ID=Cattle_Y_T00471;Parent=Cattle_Y_G00339;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00339;transcript_id=Cattle_Y_T00471;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-2
haplotype2-0000357	CAT	exon	19684333	19684410	.	+	.	ID=Cattle_Y_T00472;Parent=Cattle_Y_G00339;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00339;transcript_id=Cattle_Y_T00472;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655
haplotype2-0000357	CAT	gene	19821839	19823960	.	-	.	ID=Cattle_Y_G00340;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00340;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	19821839	19823960	.	-	.	ID=Cattle_Y_T00473;Parent=Cattle_Y_G00340;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00473;gene_id=Cattle_Y_G00340;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	19821839	19821916	.	-	.	ID=Cattle_Y_E00591;Parent=Cattle_Y_T00473;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00473;gene_id=Cattle_Y_G00340;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	19822033	19822178	.	-	.	ID=Cattle_Y_E00592;Parent=Cattle_Y_T00473;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00473;gene_id=Cattle_Y_G00340;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	19822274	19822387	.	-	.	ID=Cattle_Y_E00593;Parent=Cattle_Y_T00473;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00473;gene_id=Cattle_Y_G00340;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	19822571	19822646	.	-	.	ID=Cattle_Y_E00594;Parent=Cattle_Y_T00473;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00473;gene_id=Cattle_Y_G00340;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	19823420	19823814	.	-	.	ID=Cattle_Y_E00595;Parent=Cattle_Y_T00473;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00473;gene_id=Cattle_Y_G00340;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	19823897	19823960	.	-	.	ID=Cattle_Y_E00596;Parent=Cattle_Y_T00473;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00473;gene_id=Cattle_Y_G00340;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	19821839	19821916	.	-	0	ID=Cattle_Y_C00482;Parent=Cattle_Y_T00473;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_21;gene_id=Cattle_Y_G00340;transcript_id=Cattle_Y_T00473;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	19822033	19822178	.	-	2	ID=Cattle_Y_C00483;Parent=Cattle_Y_T00473;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_21;gene_id=Cattle_Y_G00340;transcript_id=Cattle_Y_T00473;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	19822274	19822387	.	-	2	ID=Cattle_Y_C00484;Parent=Cattle_Y_T00473;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_21;gene_id=Cattle_Y_G00340;transcript_id=Cattle_Y_T00473;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	19822571	19822646	.	-	0	ID=Cattle_Y_C00485;Parent=Cattle_Y_T00473;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_21;gene_id=Cattle_Y_G00340;transcript_id=Cattle_Y_T00473;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	19823420	19823692	.	-	0	ID=Cattle_Y_C00486;Parent=Cattle_Y_T00473;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_21;gene_id=Cattle_Y_G00340;transcript_id=Cattle_Y_T00473;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	19858732	19869765	.	+	.	ID=Cattle_Y_G00341;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00341;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	19858732	19869765	.	+	.	ID=Cattle_Y_T00474;Parent=Cattle_Y_G00341;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00474;gene_id=Cattle_Y_G00341;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	19858732	19858859	.	+	.	ID=Cattle_Y_E00597;Parent=Cattle_Y_T00474;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00474;gene_id=Cattle_Y_G00341;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	exon	19867958	19869765	.	+	.	ID=Cattle_Y_E00598;Parent=Cattle_Y_T00474;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00474;gene_id=Cattle_Y_G00341;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-2
haplotype2-0000357	CAT	CDS	19868029	19869660	.	+	0	ID=Cattle_Y_C00487;Parent=Cattle_Y_T00474;Dbxref=GeneID:768254,GenBank:NP_001071588.1,BGD:BT17804;Name=NP_001071588.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ZNF280BY;inference=similar to AA sequence (same species):RefSeq:NP_001071588.1;product=zinc finger protein 280B;protein_id=NP_001071588.1_15;gene_id=Cattle_Y_G00341;transcript_id=Cattle_Y_T00474;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	19874050	19874577	.	+	.	ID=Cattle_Y_G00342;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00342;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	19874050	19874577	.	+	.	ID=Cattle_Y_T00475;Parent=Cattle_Y_G00342;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00475;gene_id=Cattle_Y_G00342;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	19874050	19874173	.	+	.	ID=Cattle_Y_E00599;Parent=Cattle_Y_T00475;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00475;gene_id=Cattle_Y_G00342;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	19874246	19874577	.	+	.	ID=Cattle_Y_E00600;Parent=Cattle_Y_T00475;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00475;gene_id=Cattle_Y_G00342;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	19874050	19874173	.	+	0	ID=Cattle_Y_C00488;Parent=Cattle_Y_T00475;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_43;gene_id=Cattle_Y_G00342;transcript_id=Cattle_Y_T00475;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	19874246	19874577	.	+	2	ID=Cattle_Y_C00489;Parent=Cattle_Y_T00475;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_43;gene_id=Cattle_Y_G00342;transcript_id=Cattle_Y_T00475;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	19945158	19945690	.	-	.	ID=Cattle_Y_G00343;Dbxref=GeneID:132344692;Name=LOC132344692;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344692;gene_biotype=protein_coding;partial=true;start_range=.,36344638;gene_id=Cattle_Y_G00343;source_id=gene-LOC132344692
haplotype2-0000357	CAT	mRNA	19945158	19945690	.	-	.	ID=Cattle_Y_T00476;Parent=Cattle_Y_G00343;Dbxref=GeneID:132344692,GenBank:XM_059884334.1;Name=XM_059884334.1;gbkey=mRNA;gene=LOC132344692;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 60%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,36344638;transcript_id=Cattle_Y_T00476;gene_id=Cattle_Y_G00343;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884334.1
haplotype2-0000357	CAT	exon	19945158	19945690	.	-	.	ID=Cattle_Y_E00601;Parent=Cattle_Y_T00476;Dbxref=GeneID:132344692,GenBank:XM_059884334.1;gbkey=mRNA;gene=LOC132344692;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,36344638;transcript_id=Cattle_Y_T00476;gene_id=Cattle_Y_G00343;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884334.1-1
haplotype2-0000357	CAT	CDS	19945158	19945664	.	-	0	ID=Cattle_Y_C00490;Parent=Cattle_Y_T00476;Dbxref=GeneID:132344692,GenBank:XP_059740317.1;Name=XP_059740317.1;gbkey=CDS;gene=LOC132344692;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740317.1_1;start_range=.,36344638;gene_id=Cattle_Y_G00343;transcript_id=Cattle_Y_T00476;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	20029693	20030418	.	-	.	ID=Cattle_Y_G00344;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00344;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	20040842	20132114	.	+	.	ID=Cattle_Y_G00345;Dbxref=GeneID:132344457;Name=LOC132344457;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344457;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00345;source_id=gene-LOC132344457
haplotype2-0000357	CAT	exon	20040842	20040858	.	+	.	ID=Cattle_Y_T00477;Parent=Cattle_Y_G00345;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00345;transcript_id=Cattle_Y_T00477;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457
haplotype2-0000357	CAT	exon	20129952	20130034	.	+	.	ID=Cattle_Y_T00478;Parent=Cattle_Y_G00345;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00345;transcript_id=Cattle_Y_T00478;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457-2
haplotype2-0000357	CAT	exon	20130117	20130511	.	+	.	ID=Cattle_Y_T00479;Parent=Cattle_Y_G00345;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00345;transcript_id=Cattle_Y_T00479;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457-3
haplotype2-0000357	CAT	exon	20131307	20131384	.	+	.	ID=Cattle_Y_T00480;Parent=Cattle_Y_G00345;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00345;transcript_id=Cattle_Y_T00480;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457-4
haplotype2-0000357	CAT	exon	20131568	20131679	.	+	.	ID=Cattle_Y_T00481;Parent=Cattle_Y_G00345;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00345;transcript_id=Cattle_Y_T00481;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457-5
haplotype2-0000357	CAT	exon	20131775	20131920	.	+	.	ID=Cattle_Y_T00482;Parent=Cattle_Y_G00345;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00345;transcript_id=Cattle_Y_T00482;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457-6
haplotype2-0000357	CAT	exon	20132037	20132114	.	+	.	ID=Cattle_Y_T00483;Parent=Cattle_Y_G00345;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00345;transcript_id=Cattle_Y_T00483;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457-7
haplotype2-0000357	CAT	gene	20229299	20260318	.	+	.	ID=Cattle_Y_G00346;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00346;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	20229299	20260318	.	+	.	ID=Cattle_Y_T00484;Parent=Cattle_Y_G00346;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00484;gene_id=Cattle_Y_G00346;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	20229299	20229438	.	+	.	ID=Cattle_Y_E00602;Parent=Cattle_Y_T00484;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00484;gene_id=Cattle_Y_G00346;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	20258494	20260318	.	+	.	ID=Cattle_Y_E00603;Parent=Cattle_Y_T00484;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00484;gene_id=Cattle_Y_G00346;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	20258721	20260318	.	+	0	ID=Cattle_Y_C00491;Parent=Cattle_Y_T00484;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_32;gene_id=Cattle_Y_G00346;transcript_id=Cattle_Y_T00484;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	20269418	20271539	.	-	.	ID=Cattle_Y_G00347;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00347;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	20269418	20271539	.	-	.	ID=Cattle_Y_T00485;Parent=Cattle_Y_G00347;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00485;gene_id=Cattle_Y_G00347;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	20269418	20269495	.	-	.	ID=Cattle_Y_E00604;Parent=Cattle_Y_T00485;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00485;gene_id=Cattle_Y_G00347;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	20269612	20269757	.	-	.	ID=Cattle_Y_E00605;Parent=Cattle_Y_T00485;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00485;gene_id=Cattle_Y_G00347;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	20269853	20269966	.	-	.	ID=Cattle_Y_E00606;Parent=Cattle_Y_T00485;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00485;gene_id=Cattle_Y_G00347;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	20270150	20270225	.	-	.	ID=Cattle_Y_E00607;Parent=Cattle_Y_T00485;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00485;gene_id=Cattle_Y_G00347;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	20270999	20271393	.	-	.	ID=Cattle_Y_E00608;Parent=Cattle_Y_T00485;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00485;gene_id=Cattle_Y_G00347;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	20271476	20271539	.	-	.	ID=Cattle_Y_E00609;Parent=Cattle_Y_T00485;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00485;gene_id=Cattle_Y_G00347;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	20269418	20269495	.	-	0	ID=Cattle_Y_C00492;Parent=Cattle_Y_T00485;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_11;gene_id=Cattle_Y_G00347;transcript_id=Cattle_Y_T00485;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	20269612	20269757	.	-	2	ID=Cattle_Y_C00493;Parent=Cattle_Y_T00485;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_11;gene_id=Cattle_Y_G00347;transcript_id=Cattle_Y_T00485;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	20269853	20269966	.	-	2	ID=Cattle_Y_C00494;Parent=Cattle_Y_T00485;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_11;gene_id=Cattle_Y_G00347;transcript_id=Cattle_Y_T00485;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	20270150	20270225	.	-	0	ID=Cattle_Y_C00495;Parent=Cattle_Y_T00485;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_11;gene_id=Cattle_Y_G00347;transcript_id=Cattle_Y_T00485;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	20270999	20271271	.	-	0	ID=Cattle_Y_C00496;Parent=Cattle_Y_T00485;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_11;gene_id=Cattle_Y_G00347;transcript_id=Cattle_Y_T00485;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	20299463	20300200	.	+	.	ID=Cattle_Y_G00348;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00348;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	20299463	20300200	.	+	.	ID=Cattle_Y_T00486;Parent=Cattle_Y_G00348;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00348;transcript_id=Cattle_Y_T00486;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	20306274	20317328	.	+	.	ID=Cattle_Y_G00349;Dbxref=GeneID:132344698;Name=LOC132344698;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344698;gene_biotype=protein_coding;gene_id=Cattle_Y_G00349;source_id=gene-LOC132344698
haplotype2-0000357	CAT	mRNA	20306274	20317328	.	+	.	ID=Cattle_Y_T00487;Parent=Cattle_Y_G00349;Dbxref=GeneID:132344698,GenBank:XM_059884340.1;Name=XM_059884340.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344698;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00487;gene_id=Cattle_Y_G00349;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884340.1
haplotype2-0000357	CAT	exon	20306274	20306386	.	+	.	ID=Cattle_Y_E00610;Parent=Cattle_Y_T00487;Dbxref=GeneID:132344698,GenBank:XM_059884340.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344698;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00487;gene_id=Cattle_Y_G00349;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884340.1-1
haplotype2-0000357	CAT	exon	20315521	20317328	.	+	.	ID=Cattle_Y_E00611;Parent=Cattle_Y_T00487;Dbxref=GeneID:132344698,GenBank:XM_059884340.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344698;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00487;gene_id=Cattle_Y_G00349;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884340.1-2
haplotype2-0000357	CAT	CDS	20315592	20317223	.	+	0	ID=Cattle_Y_C00497;Parent=Cattle_Y_T00487;gene_id=Cattle_Y_G00349;transcript_id=Cattle_Y_T00487;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	20321630	20322157	.	+	.	ID=Cattle_Y_G00350;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00350;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	20321630	20322157	.	+	.	ID=Cattle_Y_T00488;Parent=Cattle_Y_G00350;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00488;gene_id=Cattle_Y_G00350;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	20321630	20321753	.	+	.	ID=Cattle_Y_E00612;Parent=Cattle_Y_T00488;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00488;gene_id=Cattle_Y_G00350;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	20321826	20322157	.	+	.	ID=Cattle_Y_E00613;Parent=Cattle_Y_T00488;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00488;gene_id=Cattle_Y_G00350;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	20321630	20321753	.	+	0	ID=Cattle_Y_C00498;Parent=Cattle_Y_T00488;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_38;gene_id=Cattle_Y_G00350;transcript_id=Cattle_Y_T00488;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	20321826	20322157	.	+	2	ID=Cattle_Y_C00499;Parent=Cattle_Y_T00488;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_38;gene_id=Cattle_Y_G00350;transcript_id=Cattle_Y_T00488;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	20347909	20348450	.	-	.	ID=Cattle_Y_G00351;Dbxref=GeneID:132344657;Name=LOC132344657;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344657;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00351;source_id=gene-LOC132344657
haplotype2-0000357	CAT	mRNA	20347909	20348450	.	-	.	ID=Cattle_Y_T00489;Parent=Cattle_Y_G00351;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;Name=XM_059884302.1;gbkey=mRNA;gene=LOC132344657;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00489;gene_id=Cattle_Y_G00351;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884302.1
haplotype2-0000357	CAT	exon	20347909	20348261	.	-	.	ID=Cattle_Y_E00614;Parent=Cattle_Y_T00489;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00489;gene_id=Cattle_Y_G00351;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-2
haplotype2-0000357	CAT	exon	20348325	20348450	.	-	.	ID=Cattle_Y_E00615;Parent=Cattle_Y_T00489;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00489;gene_id=Cattle_Y_G00351;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-1
haplotype2-0000357	CAT	CDS	20347909	20348132	.	-	0	ID=Cattle_Y_C00500;Parent=Cattle_Y_T00489;Dbxref=GeneID:132344657,GenBank:XP_059740285.1;Name=XP_059740285.1;gbkey=CDS;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740285.1_20;gene_id=Cattle_Y_G00351;transcript_id=Cattle_Y_T00489;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	20431650	20433342	.	+	.	ID=Cattle_Y_G00352;Dbxref=GeneID:132344699;Name=LOC132344699;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344699;gene_biotype=protein_coding;gene_id=Cattle_Y_G00352;source_id=gene-LOC132344699
haplotype2-0000357	CAT	mRNA	20431650	20433342	.	+	.	ID=Cattle_Y_T00490;Parent=Cattle_Y_G00352;Dbxref=GeneID:132344699,GenBank:XM_059884341.1;Name=XM_059884341.1;gbkey=mRNA;gene=LOC132344699;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 45%25 coverage of the annotated genomic feature by RNAseq alignments;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00490;gene_id=Cattle_Y_G00352;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884341.1
haplotype2-0000357	CAT	exon	20431650	20432159	.	+	.	ID=Cattle_Y_E00616;Parent=Cattle_Y_T00490;Dbxref=GeneID:132344699,GenBank:XM_059884341.1;gbkey=mRNA;gene=LOC132344699;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00490;gene_id=Cattle_Y_G00352;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884341.1-1
haplotype2-0000357	CAT	exon	20432590	20433342	.	+	.	ID=Cattle_Y_E00617;Parent=Cattle_Y_T00490;Dbxref=GeneID:132344699,GenBank:XM_059884341.1;gbkey=mRNA;gene=LOC132344699;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00490;gene_id=Cattle_Y_G00352;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884341.1-2
haplotype2-0000357	CAT	CDS	20431650	20432159	.	+	0	ID=Cattle_Y_C00501;Parent=Cattle_Y_T00490;gene_id=Cattle_Y_G00352;transcript_id=Cattle_Y_T00490;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	20432590	20433324	.	+	0	ID=Cattle_Y_C00502;Parent=Cattle_Y_T00490;gene_id=Cattle_Y_G00352;transcript_id=Cattle_Y_T00490;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	20637910	20640066	.	-	.	ID=Cattle_Y_G00353;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00353;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	20637910	20637987	.	-	.	ID=Cattle_Y_T00491;Parent=Cattle_Y_G00353;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00353;transcript_id=Cattle_Y_T00491;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	exon	20638104	20638249	.	-	.	ID=Cattle_Y_T00492;Parent=Cattle_Y_G00353;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00353;transcript_id=Cattle_Y_T00492;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	20638345	20638456	.	-	.	ID=Cattle_Y_T00493;Parent=Cattle_Y_G00353;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00353;transcript_id=Cattle_Y_T00493;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	20638640	20638717	.	-	.	ID=Cattle_Y_T00494;Parent=Cattle_Y_G00353;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00353;transcript_id=Cattle_Y_T00494;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	20639517	20639911	.	-	.	ID=Cattle_Y_T00495;Parent=Cattle_Y_G00353;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00353;transcript_id=Cattle_Y_T00495;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	20639994	20640066	.	-	.	ID=Cattle_Y_T00496;Parent=Cattle_Y_G00353;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00353;transcript_id=Cattle_Y_T00496;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	gene	20731082	20731804	.	-	.	ID=Cattle_Y_G00354;Dbxref=GeneID:132344675;Name=LOC132344675;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344675;gene_biotype=protein_coding;partial=true;start_range=.,28749542;gene_id=Cattle_Y_G00354;source_id=gene-LOC132344675
haplotype2-0000357	CAT	mRNA	20731082	20731804	.	-	.	ID=Cattle_Y_T00497;Parent=Cattle_Y_G00354;Dbxref=GeneID:132344675,GenBank:XM_059884315.1;Name=XM_059884315.1;gbkey=mRNA;gene=LOC132344675;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,28749542;transcript_id=Cattle_Y_T00497;gene_id=Cattle_Y_G00354;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884315.1
haplotype2-0000357	CAT	exon	20731082	20731804	.	-	.	ID=Cattle_Y_E00618;Parent=Cattle_Y_T00497;Dbxref=GeneID:132344675,GenBank:XM_059884315.1;gbkey=mRNA;gene=LOC132344675;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,28749542;transcript_id=Cattle_Y_T00497;gene_id=Cattle_Y_G00354;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884315.1-1
haplotype2-0000357	CAT	CDS	20731082	20731684	.	-	0	ID=Cattle_Y_C00503;Parent=Cattle_Y_T00497;gene_id=Cattle_Y_G00354;transcript_id=Cattle_Y_T00497;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	20807834	20808408	.	+	.	ID=Cattle_Y_G00355;Dbxref=GeneID:132344660;Name=LOC132344660;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344660;gene_biotype=likely_pseudogene;partial=true;start_range=.,24728184;gene_id=Cattle_Y_G00355;source_id=gene-LOC132344660
haplotype2-0000357	CAT	mRNA	20807834	20808408	.	+	.	ID=Cattle_Y_T00498;Parent=Cattle_Y_G00355;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;Name=XM_059884305.1;gbkey=mRNA;gene=LOC132344660;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00498;gene_id=Cattle_Y_G00355;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884305.1
haplotype2-0000357	CAT	exon	20807834	20807959	.	+	.	ID=Cattle_Y_E00619;Parent=Cattle_Y_T00498;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00498;gene_id=Cattle_Y_G00355;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-1
haplotype2-0000357	CAT	exon	20808023	20808408	.	+	.	ID=Cattle_Y_E00620;Parent=Cattle_Y_T00498;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00498;gene_id=Cattle_Y_G00355;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-2
haplotype2-0000357	CAT	CDS	20808152	20808408	.	+	0	ID=Cattle_Y_C00504;Parent=Cattle_Y_T00498;Dbxref=GeneID:132344660,GenBank:XP_059740288.1;Name=XP_059740288.1;gbkey=CDS;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740288.1_2;start_range=.,24728184;gene_id=Cattle_Y_G00355;transcript_id=Cattle_Y_T00498;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	20841406	20841933	.	-	.	ID=Cattle_Y_G00356;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00356;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	20841406	20841933	.	-	.	ID=Cattle_Y_T00499;Parent=Cattle_Y_G00356;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00499;gene_id=Cattle_Y_G00356;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	20841406	20841737	.	-	.	ID=Cattle_Y_E00621;Parent=Cattle_Y_T00499;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00499;gene_id=Cattle_Y_G00356;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	exon	20841810	20841933	.	-	.	ID=Cattle_Y_E00622;Parent=Cattle_Y_T00499;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00499;gene_id=Cattle_Y_G00356;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	CDS	20841406	20841737	.	-	2	ID=Cattle_Y_C00505;Parent=Cattle_Y_T00499;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_33;gene_id=Cattle_Y_G00356;transcript_id=Cattle_Y_T00499;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	20841810	20841933	.	-	0	ID=Cattle_Y_C00506;Parent=Cattle_Y_T00499;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_33;gene_id=Cattle_Y_G00356;transcript_id=Cattle_Y_T00499;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	20846251	20857292	.	-	.	ID=Cattle_Y_G00357;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00357;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	20846251	20857292	.	-	.	ID=Cattle_Y_T00500;Parent=Cattle_Y_G00357;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00500;gene_id=Cattle_Y_G00357;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	20846251	20848058	.	-	.	ID=Cattle_Y_E00623;Parent=Cattle_Y_T00500;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00500;gene_id=Cattle_Y_G00357;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-2
haplotype2-0000357	CAT	exon	20857165	20857292	.	-	.	ID=Cattle_Y_E00624;Parent=Cattle_Y_T00500;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00500;gene_id=Cattle_Y_G00357;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	CDS	20846356	20847987	.	-	0	ID=Cattle_Y_C00507;Parent=Cattle_Y_T00500;Dbxref=GeneID:768254,GenBank:NP_001071588.1,BGD:BT17804;Name=NP_001071588.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ZNF280BY;inference=similar to AA sequence (same species):RefSeq:NP_001071588.1;product=zinc finger protein 280B;protein_id=NP_001071588.1_20;gene_id=Cattle_Y_G00357;transcript_id=Cattle_Y_T00500;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	20887717	20889636	.	+	.	ID=Cattle_Y_G00358;Dbxref=GeneID:132344659;Name=LOC132344659;description=testis-specific Y-encoded protein 1-like;end_range=24663580,.;gbkey=Gene;gene=LOC132344659;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00358;source_id=gene-LOC132344659
haplotype2-0000357	CAT	mRNA	20887717	20889636	.	+	.	ID=Cattle_Y_T00501;Parent=Cattle_Y_G00358;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;Name=XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00501;gene_id=Cattle_Y_G00358;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884304.1
haplotype2-0000357	CAT	exon	20887717	20888055	.	+	.	ID=Cattle_Y_E00625;Parent=Cattle_Y_T00501;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00501;gene_id=Cattle_Y_G00358;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-1
haplotype2-0000357	CAT	exon	20888829	20888904	.	+	.	ID=Cattle_Y_E00626;Parent=Cattle_Y_T00501;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00501;gene_id=Cattle_Y_G00358;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-2
haplotype2-0000357	CAT	exon	20889088	20889201	.	+	.	ID=Cattle_Y_E00627;Parent=Cattle_Y_T00501;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00501;gene_id=Cattle_Y_G00358;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-3
haplotype2-0000357	CAT	exon	20889297	20889442	.	+	.	ID=Cattle_Y_E00628;Parent=Cattle_Y_T00501;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00501;gene_id=Cattle_Y_G00358;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-4
haplotype2-0000357	CAT	exon	20889559	20889636	.	+	.	ID=Cattle_Y_E00629;Parent=Cattle_Y_T00501;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00501;gene_id=Cattle_Y_G00358;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-5
haplotype2-0000357	CAT	CDS	20887717	20888055	.	+	0	ID=Cattle_Y_C00508;Parent=Cattle_Y_T00501;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;end_range=24663580,.;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_7;gene_id=Cattle_Y_G00358;transcript_id=Cattle_Y_T00501;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	20888829	20888904	.	+	0	ID=Cattle_Y_C00509;Parent=Cattle_Y_T00501;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_7;gene_id=Cattle_Y_G00358;transcript_id=Cattle_Y_T00501;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	20889088	20889201	.	+	2	ID=Cattle_Y_C00510;Parent=Cattle_Y_T00501;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_7;gene_id=Cattle_Y_G00358;transcript_id=Cattle_Y_T00501;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	20889297	20889442	.	+	2	ID=Cattle_Y_C00511;Parent=Cattle_Y_T00501;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_7;gene_id=Cattle_Y_G00358;transcript_id=Cattle_Y_T00501;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	20889559	20889636	.	+	0	ID=Cattle_Y_C00512;Parent=Cattle_Y_T00501;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_7;gene_id=Cattle_Y_G00358;transcript_id=Cattle_Y_T00501;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	20898743	20929713	.	-	.	ID=Cattle_Y_G00359;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00359;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	20898743	20929713	.	-	.	ID=Cattle_Y_T00502;Parent=Cattle_Y_G00359;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00502;gene_id=Cattle_Y_G00359;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	20898743	20900576	.	-	.	ID=Cattle_Y_E00630;Parent=Cattle_Y_T00502;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00502;gene_id=Cattle_Y_G00359;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	exon	20929574	20929713	.	-	.	ID=Cattle_Y_E00631;Parent=Cattle_Y_T00502;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00502;gene_id=Cattle_Y_G00359;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	CDS	20898743	20900349	.	-	0	ID=Cattle_Y_C00513;Parent=Cattle_Y_T00502;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_50;gene_id=Cattle_Y_G00359;transcript_id=Cattle_Y_T00502;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	21026929	21029079	.	-	.	ID=Cattle_Y_G00360;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00360;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	21026929	21027006	.	-	.	ID=Cattle_Y_T00503;Parent=Cattle_Y_G00360;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00360;transcript_id=Cattle_Y_T00503;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	exon	21027123	21027268	.	-	.	ID=Cattle_Y_T00504;Parent=Cattle_Y_G00360;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00360;transcript_id=Cattle_Y_T00504;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	21027364	21027475	.	-	.	ID=Cattle_Y_T00505;Parent=Cattle_Y_G00360;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00360;transcript_id=Cattle_Y_T00505;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	21027659	21027736	.	-	.	ID=Cattle_Y_T00506;Parent=Cattle_Y_G00360;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00360;transcript_id=Cattle_Y_T00506;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	21028530	21028924	.	-	.	ID=Cattle_Y_T00507;Parent=Cattle_Y_G00360;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00360;transcript_id=Cattle_Y_T00507;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	21029007	21029079	.	-	.	ID=Cattle_Y_T00508;Parent=Cattle_Y_G00360;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00360;transcript_id=Cattle_Y_T00508;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	gene	21163115	21172292	.	-	.	ID=Cattle_Y_G00361;Dbxref=GeneID:132344547;Name=LOC132344547;description=uncharacterized LOC132344547;gbkey=Gene;gene=LOC132344547;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00361;source_id=gene-LOC132344547
haplotype2-0000357	CAT	exon	21163115	21163162	.	-	.	ID=Cattle_Y_T00509;Parent=Cattle_Y_G00361;Dbxref=GeneID:132344547;gbkey=exon;gene=LOC132344547;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00361;transcript_id=Cattle_Y_T00509;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344547-4
haplotype2-0000357	CAT	exon	21163605	21163731	.	-	.	ID=Cattle_Y_T00510;Parent=Cattle_Y_G00361;Dbxref=GeneID:132344547;gbkey=exon;gene=LOC132344547;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00361;transcript_id=Cattle_Y_T00510;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344547-3
haplotype2-0000357	CAT	exon	21164426	21164564	.	-	.	ID=Cattle_Y_T00511;Parent=Cattle_Y_G00361;Dbxref=GeneID:132344547;gbkey=exon;gene=LOC132344547;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00361;transcript_id=Cattle_Y_T00511;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344547-2
haplotype2-0000357	CAT	exon	21171900	21172292	.	-	.	ID=Cattle_Y_T00512;Parent=Cattle_Y_G00361;Dbxref=GeneID:132344547;gbkey=exon;gene=LOC132344547;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00361;transcript_id=Cattle_Y_T00512;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344547
haplotype2-0000357	CAT	gene	21180311	21235631	.	+	.	ID=Cattle_Y_G00362;Dbxref=GeneID:132344706;Name=LOC132344706;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344706;gene_biotype=protein_coding;gene_id=Cattle_Y_G00362;source_id=gene-LOC132344706
haplotype2-0000357	CAT	mRNA	21180311	21235631	.	+	.	ID=Cattle_Y_T00513;Parent=Cattle_Y_G00362;Dbxref=GeneID:132344706,GenBank:XM_059884350.1;Name=XM_059884350.1;gbkey=mRNA;gene=LOC132344706;model_evidence=Supporting evidence includes similarity to: 4 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00513;gene_id=Cattle_Y_G00362;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884350.1
haplotype2-0000357	CAT	exon	21180311	21180434	.	+	.	ID=Cattle_Y_E00632;Parent=Cattle_Y_T00513;Dbxref=GeneID:132344706,GenBank:XM_059884350.1;gbkey=mRNA;gene=LOC132344706;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00513;gene_id=Cattle_Y_G00362;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884350.1-1
haplotype2-0000357	CAT	exon	21233654	21234048	.	+	.	ID=Cattle_Y_E00633;Parent=Cattle_Y_T00513;Dbxref=GeneID:132344706,GenBank:XM_059884350.1;gbkey=mRNA;gene=LOC132344706;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00513;gene_id=Cattle_Y_G00362;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884350.1-1
haplotype2-0000357	CAT	exon	21234826	21234901	.	+	.	ID=Cattle_Y_E00634;Parent=Cattle_Y_T00513;Dbxref=GeneID:132344706,GenBank:XM_059884350.1;gbkey=mRNA;gene=LOC132344706;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00513;gene_id=Cattle_Y_G00362;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884350.1-1
haplotype2-0000357	CAT	exon	21235085	21235198	.	+	.	ID=Cattle_Y_E00635;Parent=Cattle_Y_T00513;Dbxref=GeneID:132344706,GenBank:XM_059884350.1;gbkey=mRNA;gene=LOC132344706;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00513;gene_id=Cattle_Y_G00362;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884350.1-1
haplotype2-0000357	CAT	exon	21235292	21235437	.	+	.	ID=Cattle_Y_E00636;Parent=Cattle_Y_T00513;Dbxref=GeneID:132344706,GenBank:XM_059884350.1;gbkey=mRNA;gene=LOC132344706;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00513;gene_id=Cattle_Y_G00362;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884350.1-1
haplotype2-0000357	CAT	exon	21235554	21235631	.	+	.	ID=Cattle_Y_E00637;Parent=Cattle_Y_T00513;Dbxref=GeneID:132344706,GenBank:XM_059884350.1;gbkey=mRNA;gene=LOC132344706;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00513;gene_id=Cattle_Y_G00362;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884350.1-6
haplotype2-0000357	CAT	CDS	21180311	21180434	.	+	0	ID=Cattle_Y_C00514;Parent=Cattle_Y_T00513;gene_id=Cattle_Y_G00362;transcript_id=Cattle_Y_T00513;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	21233654	21234048	.	+	2	ID=Cattle_Y_C00515;Parent=Cattle_Y_T00513;gene_id=Cattle_Y_G00362;transcript_id=Cattle_Y_T00513;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	21234826	21234901	.	+	0	ID=Cattle_Y_C00516;Parent=Cattle_Y_T00513;gene_id=Cattle_Y_G00362;transcript_id=Cattle_Y_T00513;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	21235085	21235198	.	+	2	ID=Cattle_Y_C00517;Parent=Cattle_Y_T00513;gene_id=Cattle_Y_G00362;transcript_id=Cattle_Y_T00513;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	21235292	21235437	.	+	2	ID=Cattle_Y_C00518;Parent=Cattle_Y_T00513;gene_id=Cattle_Y_G00362;transcript_id=Cattle_Y_T00513;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	21235554	21235631	.	+	0	ID=Cattle_Y_C00519;Parent=Cattle_Y_T00513;gene_id=Cattle_Y_G00362;transcript_id=Cattle_Y_T00513;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	21191647	21193490	.	-	.	ID=Cattle_Y_G00363;Dbxref=GeneID:132344680;Name=LOC132344680;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344680;gene_biotype=protein_coding;gene_id=Cattle_Y_G00363;source_id=gene-LOC132344680
haplotype2-0000357	CAT	mRNA	21191647	21193490	.	-	.	ID=Cattle_Y_T00514;Parent=Cattle_Y_G00363;Dbxref=GeneID:132344680,GenBank:XM_059884320.1;Name=XM_059884320.1;gbkey=mRNA;gene=LOC132344680;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 99%25 coverage of the annotated genomic feature by RNAseq alignments;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00514;gene_id=Cattle_Y_G00363;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884320.1
haplotype2-0000357	CAT	exon	21191647	21193490	.	-	.	ID=Cattle_Y_E00638;Parent=Cattle_Y_T00514;Dbxref=GeneID:132344680,GenBank:XM_059884320.1;gbkey=mRNA;gene=LOC132344680;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00514;gene_id=Cattle_Y_G00363;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884320.1-1
haplotype2-0000357	CAT	CDS	21191792	21193423	.	-	0	ID=Cattle_Y_C00520;Parent=Cattle_Y_T00514;gene_id=Cattle_Y_G00363;transcript_id=Cattle_Y_T00514;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	21208823	21209560	.	-	.	ID=Cattle_Y_G00364;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00364;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	21208823	21209560	.	-	.	ID=Cattle_Y_T00515;Parent=Cattle_Y_G00364;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00364;transcript_id=Cattle_Y_T00515;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	21382599	21384514	.	-	.	ID=Cattle_Y_G00365;Dbxref=GeneID:132344659;Name=LOC132344659;description=testis-specific Y-encoded protein 1-like;end_range=24663580,.;gbkey=Gene;gene=LOC132344659;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00365;source_id=gene-LOC132344659
haplotype2-0000357	CAT	mRNA	21382599	21384514	.	-	.	ID=Cattle_Y_T00516;Parent=Cattle_Y_G00365;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;Name=XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00516;gene_id=Cattle_Y_G00365;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884304.1
haplotype2-0000357	CAT	exon	21382599	21382676	.	-	.	ID=Cattle_Y_E00639;Parent=Cattle_Y_T00516;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00516;gene_id=Cattle_Y_G00365;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-5
haplotype2-0000357	CAT	exon	21382793	21382938	.	-	.	ID=Cattle_Y_E00640;Parent=Cattle_Y_T00516;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00516;gene_id=Cattle_Y_G00365;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-4
haplotype2-0000357	CAT	exon	21383032	21383145	.	-	.	ID=Cattle_Y_E00641;Parent=Cattle_Y_T00516;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00516;gene_id=Cattle_Y_G00365;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-3
haplotype2-0000357	CAT	exon	21383329	21383404	.	-	.	ID=Cattle_Y_E00642;Parent=Cattle_Y_T00516;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00516;gene_id=Cattle_Y_G00365;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-2
haplotype2-0000357	CAT	exon	21384176	21384514	.	-	.	ID=Cattle_Y_E00643;Parent=Cattle_Y_T00516;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00516;gene_id=Cattle_Y_G00365;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-1
haplotype2-0000357	CAT	CDS	21382599	21382676	.	-	0	ID=Cattle_Y_C00521;Parent=Cattle_Y_T00516;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_4;gene_id=Cattle_Y_G00365;transcript_id=Cattle_Y_T00516;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	21382793	21382938	.	-	2	ID=Cattle_Y_C00522;Parent=Cattle_Y_T00516;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_4;gene_id=Cattle_Y_G00365;transcript_id=Cattle_Y_T00516;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	21383032	21383145	.	-	2	ID=Cattle_Y_C00523;Parent=Cattle_Y_T00516;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_4;gene_id=Cattle_Y_G00365;transcript_id=Cattle_Y_T00516;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	21383329	21383404	.	-	0	ID=Cattle_Y_C00524;Parent=Cattle_Y_T00516;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_4;gene_id=Cattle_Y_G00365;transcript_id=Cattle_Y_T00516;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	21384176	21384514	.	-	0	ID=Cattle_Y_C00525;Parent=Cattle_Y_T00516;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;end_range=24663580,.;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_4;gene_id=Cattle_Y_G00365;transcript_id=Cattle_Y_T00516;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	21408093	21408830	.	+	.	ID=Cattle_Y_G00366;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00366;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	21408093	21408830	.	+	.	ID=Cattle_Y_T00517;Parent=Cattle_Y_G00366;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00366;transcript_id=Cattle_Y_T00517;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	21414942	21425975	.	+	.	ID=Cattle_Y_G00367;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00367;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	21414942	21425975	.	+	.	ID=Cattle_Y_T00518;Parent=Cattle_Y_G00367;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00518;gene_id=Cattle_Y_G00367;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	21414942	21415069	.	+	.	ID=Cattle_Y_E00644;Parent=Cattle_Y_T00518;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00518;gene_id=Cattle_Y_G00367;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	exon	21424168	21425975	.	+	.	ID=Cattle_Y_E00645;Parent=Cattle_Y_T00518;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00518;gene_id=Cattle_Y_G00367;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-2
haplotype2-0000357	CAT	CDS	21424239	21425870	.	+	0	ID=Cattle_Y_C00526;Parent=Cattle_Y_T00518;gene_id=Cattle_Y_G00367;transcript_id=Cattle_Y_T00518;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	21430297	21430824	.	+	.	ID=Cattle_Y_G00368;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00368;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	21430297	21430824	.	+	.	ID=Cattle_Y_T00519;Parent=Cattle_Y_G00368;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00519;gene_id=Cattle_Y_G00368;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	21430297	21430420	.	+	.	ID=Cattle_Y_E00646;Parent=Cattle_Y_T00519;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00519;gene_id=Cattle_Y_G00368;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	21430493	21430824	.	+	.	ID=Cattle_Y_E00647;Parent=Cattle_Y_T00519;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00519;gene_id=Cattle_Y_G00368;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	21430297	21430420	.	+	0	ID=Cattle_Y_C00527;Parent=Cattle_Y_T00519;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_46;gene_id=Cattle_Y_G00368;transcript_id=Cattle_Y_T00519;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	21430493	21430824	.	+	2	ID=Cattle_Y_C00528;Parent=Cattle_Y_T00519;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_46;gene_id=Cattle_Y_G00368;transcript_id=Cattle_Y_T00519;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	21500155	21502005	.	-	.	ID=Cattle_Y_G00369;Dbxref=BGD:BT13513,GeneID:767933;Name=HSFY2;description=heat shock transcription factor%2C Y-linked 2;gbkey=Gene;gene=HSFY2;gene_biotype=protein_coding;gene_id=Cattle_Y_G00369;source_id=gene-HSFY2
haplotype2-0000357	CAT	mRNA	21500155	21502005	.	-	.	ID=Cattle_Y_T00520;Parent=Cattle_Y_G00369;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;Name=NM_001077006.1;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor%2C Y-linked 2;transcript_id=Cattle_Y_T00520;gene_id=Cattle_Y_G00369;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001077006.1
haplotype2-0000357	CAT	exon	21500155	21500968	.	-	.	ID=Cattle_Y_E00648;Parent=Cattle_Y_T00520;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;transcript_id=Cattle_Y_T00520;gene_id=Cattle_Y_G00369;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001077006.1-2
haplotype2-0000357	CAT	exon	21501399	21502005	.	-	.	ID=Cattle_Y_E00649;Parent=Cattle_Y_T00520;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;transcript_id=Cattle_Y_T00520;gene_id=Cattle_Y_G00369;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001077006.1-1
haplotype2-0000357	CAT	CDS	21500225	21500968	.	-	0	ID=Cattle_Y_C00529;Parent=Cattle_Y_T00520;Dbxref=GeneID:767933,GenBank:NP_001070474.1,BGD:BT13513;Name=NP_001070474.1;gbkey=CDS;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;protein_id=NP_001070474.1_7;gene_id=Cattle_Y_G00369;transcript_id=Cattle_Y_T00520;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	21501399	21501908	.	-	0	ID=Cattle_Y_C00530;Parent=Cattle_Y_T00520;Dbxref=GeneID:767933,GenBank:NP_001070474.1,BGD:BT13513;Name=NP_001070474.1;gbkey=CDS;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;protein_id=NP_001070474.1_7;gene_id=Cattle_Y_G00369;transcript_id=Cattle_Y_T00520;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	21508557	21509277	.	+	.	ID=Cattle_Y_G00370;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00370;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	21586021	21586741	.	-	.	ID=Cattle_Y_G00371;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00371;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	21593293	21595143	.	+	.	ID=Cattle_Y_G00372;Dbxref=BGD:BT13513,GeneID:767933;Name=HSFY2;description=heat shock transcription factor%2C Y-linked 2;gbkey=Gene;gene=HSFY2;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00372;source_id=gene-HSFY2
haplotype2-0000357	CAT	mRNA	21593293	21595143	.	+	.	ID=Cattle_Y_T00521;Parent=Cattle_Y_G00372;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;Name=NM_001077006.1;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor%2C Y-linked 2;transcript_id=Cattle_Y_T00521;gene_id=Cattle_Y_G00372;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001077006.1
haplotype2-0000357	CAT	exon	21593293	21593899	.	+	.	ID=Cattle_Y_E00650;Parent=Cattle_Y_T00521;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;transcript_id=Cattle_Y_T00521;gene_id=Cattle_Y_G00372;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001077006.1-1
haplotype2-0000357	CAT	exon	21594330	21595143	.	+	.	ID=Cattle_Y_E00651;Parent=Cattle_Y_T00521;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;transcript_id=Cattle_Y_T00521;gene_id=Cattle_Y_G00372;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001077006.1-2
haplotype2-0000357	CAT	CDS	21593390	21593899	.	+	0	ID=Cattle_Y_C00531;Parent=Cattle_Y_T00521;Dbxref=GeneID:767933,GenBank:NP_001070474.1,BGD:BT13513;Name=NP_001070474.1;gbkey=CDS;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;protein_id=NP_001070474.1_10;gene_id=Cattle_Y_G00372;transcript_id=Cattle_Y_T00521;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	CDS	21594330	21595073	.	+	0	ID=Cattle_Y_C00532;Parent=Cattle_Y_T00521;Dbxref=GeneID:767933,GenBank:NP_001070474.1,BGD:BT13513;Name=NP_001070474.1;gbkey=CDS;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;protein_id=NP_001070474.1_10;gene_id=Cattle_Y_G00372;transcript_id=Cattle_Y_T00521;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	21664472	21664999	.	-	.	ID=Cattle_Y_G00373;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00373;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	21664472	21664999	.	-	.	ID=Cattle_Y_T00522;Parent=Cattle_Y_G00373;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00522;gene_id=Cattle_Y_G00373;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	21664472	21664803	.	-	.	ID=Cattle_Y_E00652;Parent=Cattle_Y_T00522;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00522;gene_id=Cattle_Y_G00373;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	exon	21664876	21664999	.	-	.	ID=Cattle_Y_E00653;Parent=Cattle_Y_T00522;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00522;gene_id=Cattle_Y_G00373;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	CDS	21664472	21664803	.	-	2	ID=Cattle_Y_C00533;Parent=Cattle_Y_T00522;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_22;gene_id=Cattle_Y_G00373;transcript_id=Cattle_Y_T00522;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	21664876	21664999	.	-	0	ID=Cattle_Y_C00534;Parent=Cattle_Y_T00522;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_22;gene_id=Cattle_Y_G00373;transcript_id=Cattle_Y_T00522;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	21669323	21680364	.	-	.	ID=Cattle_Y_G00374;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00374;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	21669323	21680364	.	-	.	ID=Cattle_Y_T00523;Parent=Cattle_Y_G00374;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00523;gene_id=Cattle_Y_G00374;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	21669323	21671130	.	-	.	ID=Cattle_Y_E00654;Parent=Cattle_Y_T00523;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00523;gene_id=Cattle_Y_G00374;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-2
haplotype2-0000357	CAT	exon	21680237	21680364	.	-	.	ID=Cattle_Y_E00655;Parent=Cattle_Y_T00523;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00523;gene_id=Cattle_Y_G00374;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	CDS	21669428	21671059	.	-	0	ID=Cattle_Y_C00535;Parent=Cattle_Y_T00523;Dbxref=GeneID:768254,GenBank:NP_001071588.1,BGD:BT17804;Name=NP_001071588.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ZNF280BY;inference=similar to AA sequence (same species):RefSeq:NP_001071588.1;product=zinc finger protein 280B;protein_id=NP_001071588.1_8;gene_id=Cattle_Y_G00374;transcript_id=Cattle_Y_T00523;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	21715122	21717243	.	+	.	ID=Cattle_Y_G00375;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00375;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	21715122	21717243	.	+	.	ID=Cattle_Y_T00524;Parent=Cattle_Y_G00375;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00524;gene_id=Cattle_Y_G00375;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	21715122	21715185	.	+	.	ID=Cattle_Y_E00656;Parent=Cattle_Y_T00524;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00524;gene_id=Cattle_Y_G00375;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	exon	21715268	21715662	.	+	.	ID=Cattle_Y_E00657;Parent=Cattle_Y_T00524;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00524;gene_id=Cattle_Y_G00375;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	21716436	21716511	.	+	.	ID=Cattle_Y_E00658;Parent=Cattle_Y_T00524;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00524;gene_id=Cattle_Y_G00375;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	21716695	21716808	.	+	.	ID=Cattle_Y_E00659;Parent=Cattle_Y_T00524;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00524;gene_id=Cattle_Y_G00375;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	21716904	21717049	.	+	.	ID=Cattle_Y_E00660;Parent=Cattle_Y_T00524;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00524;gene_id=Cattle_Y_G00375;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	21717166	21717243	.	+	.	ID=Cattle_Y_E00661;Parent=Cattle_Y_T00524;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00524;gene_id=Cattle_Y_G00375;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	CDS	21715390	21715662	.	+	0	ID=Cattle_Y_C00536;Parent=Cattle_Y_T00524;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_18;gene_id=Cattle_Y_G00375;transcript_id=Cattle_Y_T00524;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	21716436	21716511	.	+	0	ID=Cattle_Y_C00537;Parent=Cattle_Y_T00524;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_18;gene_id=Cattle_Y_G00375;transcript_id=Cattle_Y_T00524;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	21716695	21716808	.	+	2	ID=Cattle_Y_C00538;Parent=Cattle_Y_T00524;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_18;gene_id=Cattle_Y_G00375;transcript_id=Cattle_Y_T00524;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	21716904	21717049	.	+	2	ID=Cattle_Y_C00539;Parent=Cattle_Y_T00524;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_18;gene_id=Cattle_Y_G00375;transcript_id=Cattle_Y_T00524;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	21717166	21717243	.	+	0	ID=Cattle_Y_C00540;Parent=Cattle_Y_T00524;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_18;gene_id=Cattle_Y_G00375;transcript_id=Cattle_Y_T00524;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	21726333	21757357	.	-	.	ID=Cattle_Y_G00376;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00376;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	21726333	21757357	.	-	.	ID=Cattle_Y_T00525;Parent=Cattle_Y_G00376;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00525;gene_id=Cattle_Y_G00376;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	21726333	21728157	.	-	.	ID=Cattle_Y_E00662;Parent=Cattle_Y_T00525;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00525;gene_id=Cattle_Y_G00376;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	exon	21757218	21757357	.	-	.	ID=Cattle_Y_E00663;Parent=Cattle_Y_T00525;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00525;gene_id=Cattle_Y_G00376;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	CDS	21726333	21727930	.	-	0	ID=Cattle_Y_C00541;Parent=Cattle_Y_T00525;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_30;gene_id=Cattle_Y_G00376;transcript_id=Cattle_Y_T00525;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	21854669	21945959	.	-	.	ID=Cattle_Y_G00377;Dbxref=GeneID:132344457;Name=LOC132344457;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344457;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00377;source_id=gene-LOC132344457
haplotype2-0000357	CAT	exon	21854669	21854746	.	-	.	ID=Cattle_Y_T00526;Parent=Cattle_Y_G00377;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00377;transcript_id=Cattle_Y_T00526;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457-7
haplotype2-0000357	CAT	exon	21854863	21855008	.	-	.	ID=Cattle_Y_T00527;Parent=Cattle_Y_G00377;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00377;transcript_id=Cattle_Y_T00527;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457-6
haplotype2-0000357	CAT	exon	21855104	21855215	.	-	.	ID=Cattle_Y_T00528;Parent=Cattle_Y_G00377;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00377;transcript_id=Cattle_Y_T00528;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457-5
haplotype2-0000357	CAT	exon	21855399	21855476	.	-	.	ID=Cattle_Y_T00529;Parent=Cattle_Y_G00377;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00377;transcript_id=Cattle_Y_T00529;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457-4
haplotype2-0000357	CAT	exon	21856262	21856656	.	-	.	ID=Cattle_Y_T00530;Parent=Cattle_Y_G00377;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00377;transcript_id=Cattle_Y_T00530;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457-3
haplotype2-0000357	CAT	exon	21856739	21856821	.	-	.	ID=Cattle_Y_T00531;Parent=Cattle_Y_G00377;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00377;transcript_id=Cattle_Y_T00531;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457-2
haplotype2-0000357	CAT	exon	21945943	21945959	.	-	.	ID=Cattle_Y_T00532;Parent=Cattle_Y_G00377;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00377;transcript_id=Cattle_Y_T00532;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457
haplotype2-0000357	CAT	gene	21956517	21957240	.	+	.	ID=Cattle_Y_G00378;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00378;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	22034687	22035413	.	-	.	ID=Cattle_Y_G00379;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00379;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	22137226	22140210	.	+	.	ID=Cattle_Y_G00380;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00380;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	22232467	22234588	.	-	.	ID=Cattle_Y_G00381;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00381;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	22232467	22234588	.	-	.	ID=Cattle_Y_T00533;Parent=Cattle_Y_G00381;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00533;gene_id=Cattle_Y_G00381;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	22232467	22232544	.	-	.	ID=Cattle_Y_E00664;Parent=Cattle_Y_T00533;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00533;gene_id=Cattle_Y_G00381;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	22232661	22232806	.	-	.	ID=Cattle_Y_E00665;Parent=Cattle_Y_T00533;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00533;gene_id=Cattle_Y_G00381;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	22232902	22233015	.	-	.	ID=Cattle_Y_E00666;Parent=Cattle_Y_T00533;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00533;gene_id=Cattle_Y_G00381;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	22233199	22233274	.	-	.	ID=Cattle_Y_E00667;Parent=Cattle_Y_T00533;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00533;gene_id=Cattle_Y_G00381;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	22234048	22234442	.	-	.	ID=Cattle_Y_E00668;Parent=Cattle_Y_T00533;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00533;gene_id=Cattle_Y_G00381;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	22234525	22234588	.	-	.	ID=Cattle_Y_E00669;Parent=Cattle_Y_T00533;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00533;gene_id=Cattle_Y_G00381;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	22232467	22232544	.	-	0	ID=Cattle_Y_C00542;Parent=Cattle_Y_T00533;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_9;gene_id=Cattle_Y_G00381;transcript_id=Cattle_Y_T00533;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	22232661	22232806	.	-	2	ID=Cattle_Y_C00543;Parent=Cattle_Y_T00533;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_9;gene_id=Cattle_Y_G00381;transcript_id=Cattle_Y_T00533;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	22232902	22233015	.	-	2	ID=Cattle_Y_C00544;Parent=Cattle_Y_T00533;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_9;gene_id=Cattle_Y_G00381;transcript_id=Cattle_Y_T00533;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	22233199	22233274	.	-	0	ID=Cattle_Y_C00545;Parent=Cattle_Y_T00533;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_9;gene_id=Cattle_Y_G00381;transcript_id=Cattle_Y_T00533;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	22234048	22234442	.	-	2	ID=Cattle_Y_C00546;Parent=Cattle_Y_T00533;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_9;gene_id=Cattle_Y_G00381;transcript_id=Cattle_Y_T00533;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	22234525	22234588	.	-	0	ID=Cattle_Y_C00547;Parent=Cattle_Y_T00533;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;end_range=36675566,.;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_9;gene_id=Cattle_Y_G00381;transcript_id=Cattle_Y_T00533;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	22269355	22280382	.	+	.	ID=Cattle_Y_G00382;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00382;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	22269355	22280382	.	+	.	ID=Cattle_Y_T00534;Parent=Cattle_Y_G00382;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00534;gene_id=Cattle_Y_G00382;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	22269355	22269482	.	+	.	ID=Cattle_Y_E00670;Parent=Cattle_Y_T00534;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00534;gene_id=Cattle_Y_G00382;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	exon	22278575	22280382	.	+	.	ID=Cattle_Y_E00671;Parent=Cattle_Y_T00534;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00534;gene_id=Cattle_Y_G00382;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-2
haplotype2-0000357	CAT	CDS	22278646	22280277	.	+	0	ID=Cattle_Y_C00548;Parent=Cattle_Y_T00534;gene_id=Cattle_Y_G00382;transcript_id=Cattle_Y_T00534;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	22355727	22356437	.	-	.	ID=Cattle_Y_G00383;Dbxref=GeneID:132344687;Name=LOC132344687;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344687;gene_biotype=protein_coding;partial=true;start_range=.,33987334;gene_id=Cattle_Y_G00383;source_id=gene-LOC132344687
haplotype2-0000357	CAT	mRNA	22355727	22356437	.	-	.	ID=Cattle_Y_T00535;Parent=Cattle_Y_G00383;Dbxref=GeneID:132344687,GenBank:XM_059884328.1;Name=XM_059884328.1;gbkey=mRNA;gene=LOC132344687;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 41%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,33987334;transcript_id=Cattle_Y_T00535;gene_id=Cattle_Y_G00383;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884328.1
haplotype2-0000357	CAT	exon	22355727	22356437	.	-	.	ID=Cattle_Y_E00672;Parent=Cattle_Y_T00535;Dbxref=GeneID:132344687,GenBank:XM_059884328.1;gbkey=mRNA;gene=LOC132344687;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,33987334;transcript_id=Cattle_Y_T00535;gene_id=Cattle_Y_G00383;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884328.1-1
haplotype2-0000357	CAT	CDS	22355727	22356317	.	-	0	ID=Cattle_Y_C00549;Parent=Cattle_Y_T00535;Dbxref=GeneID:132344687,GenBank:XP_059740311.1;Name=XP_059740311.1;gbkey=CDS;gene=LOC132344687;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740311.1_2;start_range=.,33987334;gene_id=Cattle_Y_G00383;transcript_id=Cattle_Y_T00535;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	22440388	22441112	.	-	.	ID=Cattle_Y_G00384;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00384;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	22542894	22545878	.	+	.	ID=Cattle_Y_G00385;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00385;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	22638112	22640233	.	-	.	ID=Cattle_Y_G00386;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00386;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	22638112	22640233	.	-	.	ID=Cattle_Y_T00536;Parent=Cattle_Y_G00386;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00536;gene_id=Cattle_Y_G00386;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	22638112	22638189	.	-	.	ID=Cattle_Y_E00673;Parent=Cattle_Y_T00536;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00536;gene_id=Cattle_Y_G00386;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	22638306	22638451	.	-	.	ID=Cattle_Y_E00674;Parent=Cattle_Y_T00536;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00536;gene_id=Cattle_Y_G00386;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	22638547	22638660	.	-	.	ID=Cattle_Y_E00675;Parent=Cattle_Y_T00536;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00536;gene_id=Cattle_Y_G00386;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	22638844	22638919	.	-	.	ID=Cattle_Y_E00676;Parent=Cattle_Y_T00536;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00536;gene_id=Cattle_Y_G00386;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	22639693	22640087	.	-	.	ID=Cattle_Y_E00677;Parent=Cattle_Y_T00536;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00536;gene_id=Cattle_Y_G00386;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	22640170	22640233	.	-	.	ID=Cattle_Y_E00678;Parent=Cattle_Y_T00536;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00536;gene_id=Cattle_Y_G00386;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	22638112	22638189	.	-	0	ID=Cattle_Y_C00550;Parent=Cattle_Y_T00536;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_14;gene_id=Cattle_Y_G00386;transcript_id=Cattle_Y_T00536;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	22638306	22638451	.	-	2	ID=Cattle_Y_C00551;Parent=Cattle_Y_T00536;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_14;gene_id=Cattle_Y_G00386;transcript_id=Cattle_Y_T00536;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	22638547	22638660	.	-	2	ID=Cattle_Y_C00552;Parent=Cattle_Y_T00536;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_14;gene_id=Cattle_Y_G00386;transcript_id=Cattle_Y_T00536;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	22638844	22638919	.	-	0	ID=Cattle_Y_C00553;Parent=Cattle_Y_T00536;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_14;gene_id=Cattle_Y_G00386;transcript_id=Cattle_Y_T00536;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	22639693	22639965	.	-	0	ID=Cattle_Y_C00554;Parent=Cattle_Y_T00536;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_14;gene_id=Cattle_Y_G00386;transcript_id=Cattle_Y_T00536;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	22675003	22686030	.	+	.	ID=Cattle_Y_G00387;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00387;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	22675003	22686030	.	+	.	ID=Cattle_Y_T00537;Parent=Cattle_Y_G00387;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00537;gene_id=Cattle_Y_G00387;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	22675003	22675130	.	+	.	ID=Cattle_Y_E00679;Parent=Cattle_Y_T00537;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00537;gene_id=Cattle_Y_G00387;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	exon	22684223	22686030	.	+	.	ID=Cattle_Y_E00680;Parent=Cattle_Y_T00537;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00537;gene_id=Cattle_Y_G00387;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-2
haplotype2-0000357	CAT	CDS	22684294	22685925	.	+	0	ID=Cattle_Y_C00555;Parent=Cattle_Y_T00537;gene_id=Cattle_Y_G00387;transcript_id=Cattle_Y_T00537;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	22761377	22762087	.	-	.	ID=Cattle_Y_G00388;Dbxref=GeneID:132344687;Name=LOC132344687;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344687;gene_biotype=protein_coding;partial=true;start_range=.,33987334;gene_id=Cattle_Y_G00388;source_id=gene-LOC132344687
haplotype2-0000357	CAT	mRNA	22761377	22762087	.	-	.	ID=Cattle_Y_T00538;Parent=Cattle_Y_G00388;Dbxref=GeneID:132344687,GenBank:XM_059884328.1;Name=XM_059884328.1;gbkey=mRNA;gene=LOC132344687;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 41%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,33987334;transcript_id=Cattle_Y_T00538;gene_id=Cattle_Y_G00388;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884328.1
haplotype2-0000357	CAT	exon	22761377	22762087	.	-	.	ID=Cattle_Y_E00681;Parent=Cattle_Y_T00538;Dbxref=GeneID:132344687,GenBank:XM_059884328.1;gbkey=mRNA;gene=LOC132344687;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,33987334;transcript_id=Cattle_Y_T00538;gene_id=Cattle_Y_G00388;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884328.1-1
haplotype2-0000357	CAT	CDS	22761377	22761967	.	-	0	ID=Cattle_Y_C00556;Parent=Cattle_Y_T00538;Dbxref=GeneID:132344687,GenBank:XP_059740311.1;Name=XP_059740311.1;gbkey=CDS;gene=LOC132344687;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740311.1_3;start_range=.,33987334;gene_id=Cattle_Y_G00388;transcript_id=Cattle_Y_T00538;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	22845989	22846713	.	-	.	ID=Cattle_Y_G00389;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00389;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	22946481	22949470	.	+	.	ID=Cattle_Y_G00390;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00390;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	23045652	23076666	.	+	.	ID=Cattle_Y_G00391;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00391;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	23045652	23076666	.	+	.	ID=Cattle_Y_T00539;Parent=Cattle_Y_G00391;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00539;gene_id=Cattle_Y_G00391;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	23045652	23045791	.	+	.	ID=Cattle_Y_E00682;Parent=Cattle_Y_T00539;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00539;gene_id=Cattle_Y_G00391;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	23074843	23076666	.	+	.	ID=Cattle_Y_E00683;Parent=Cattle_Y_T00539;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00539;gene_id=Cattle_Y_G00391;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	23075070	23076666	.	+	0	ID=Cattle_Y_C00557;Parent=Cattle_Y_T00539;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_29;gene_id=Cattle_Y_G00391;transcript_id=Cattle_Y_T00539;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	23085766	23087887	.	-	.	ID=Cattle_Y_G00392;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00392;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	23085766	23087887	.	-	.	ID=Cattle_Y_T00540;Parent=Cattle_Y_G00392;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00540;gene_id=Cattle_Y_G00392;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	23085766	23085843	.	-	.	ID=Cattle_Y_E00684;Parent=Cattle_Y_T00540;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00540;gene_id=Cattle_Y_G00392;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	23085960	23086105	.	-	.	ID=Cattle_Y_E00685;Parent=Cattle_Y_T00540;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00540;gene_id=Cattle_Y_G00392;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	23086201	23086314	.	-	.	ID=Cattle_Y_E00686;Parent=Cattle_Y_T00540;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00540;gene_id=Cattle_Y_G00392;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	23086498	23086573	.	-	.	ID=Cattle_Y_E00687;Parent=Cattle_Y_T00540;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00540;gene_id=Cattle_Y_G00392;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	23087347	23087741	.	-	.	ID=Cattle_Y_E00688;Parent=Cattle_Y_T00540;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00540;gene_id=Cattle_Y_G00392;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	23087824	23087887	.	-	.	ID=Cattle_Y_E00689;Parent=Cattle_Y_T00540;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00540;gene_id=Cattle_Y_G00392;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	23085766	23085843	.	-	0	ID=Cattle_Y_C00558;Parent=Cattle_Y_T00540;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_16;gene_id=Cattle_Y_G00392;transcript_id=Cattle_Y_T00540;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	23085960	23086105	.	-	2	ID=Cattle_Y_C00559;Parent=Cattle_Y_T00540;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_16;gene_id=Cattle_Y_G00392;transcript_id=Cattle_Y_T00540;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	23086201	23086314	.	-	2	ID=Cattle_Y_C00560;Parent=Cattle_Y_T00540;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_16;gene_id=Cattle_Y_G00392;transcript_id=Cattle_Y_T00540;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	23086498	23086573	.	-	0	ID=Cattle_Y_C00561;Parent=Cattle_Y_T00540;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_16;gene_id=Cattle_Y_G00392;transcript_id=Cattle_Y_T00540;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	23087347	23087619	.	-	0	ID=Cattle_Y_C00562;Parent=Cattle_Y_T00540;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_16;gene_id=Cattle_Y_G00392;transcript_id=Cattle_Y_T00540;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	23115808	23116545	.	+	.	ID=Cattle_Y_G00393;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00393;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	23115808	23116545	.	+	.	ID=Cattle_Y_T00541;Parent=Cattle_Y_G00393;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00393;transcript_id=Cattle_Y_T00541;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	23122637	23133700	.	+	.	ID=Cattle_Y_G00394;Dbxref=GeneID:132344709;Name=LOC132344709;description=uncharacterized LOC132344709;gbkey=Gene;gene=LOC132344709;gene_biotype=lncRNA;gene_id=Cattle_Y_G00394;source_id=gene-LOC132344709
haplotype2-0000357	CAT	lnc_RNA	23122637	23133700	.	+	.	ID=Cattle_Y_T00542;Parent=Cattle_Y_G00394;Dbxref=GeneID:132344709,GenBank:XR_009493662.1;Name=XR_009493662.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=ncRNA;gene=LOC132344709;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T00542;gene_id=Cattle_Y_G00394;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=rna-XR_009493662.1
haplotype2-0000357	CAT	exon	23122637	23122745	.	+	.	ID=Cattle_Y_E00690;Parent=Cattle_Y_T00542;Dbxref=GeneID:132344709,GenBank:XR_009493662.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=ncRNA;gene=LOC132344709;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T00542;gene_id=Cattle_Y_G00394;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493662.1-1
haplotype2-0000357	CAT	exon	23131893	23133700	.	+	.	ID=Cattle_Y_E00691;Parent=Cattle_Y_T00542;Dbxref=GeneID:132344709,GenBank:XR_009493662.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=ncRNA;gene=LOC132344709;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T00542;gene_id=Cattle_Y_G00394;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493662.1-2
haplotype2-0000357	CAT	gene	23137993	23138520	.	+	.	ID=Cattle_Y_G00395;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00395;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	23137993	23138520	.	+	.	ID=Cattle_Y_T00543;Parent=Cattle_Y_G00395;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00543;gene_id=Cattle_Y_G00395;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	23137993	23138116	.	+	.	ID=Cattle_Y_E00692;Parent=Cattle_Y_T00543;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00543;gene_id=Cattle_Y_G00395;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	23138189	23138520	.	+	.	ID=Cattle_Y_E00693;Parent=Cattle_Y_T00543;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00543;gene_id=Cattle_Y_G00395;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	23137993	23138116	.	+	0	ID=Cattle_Y_C00563;Parent=Cattle_Y_T00543;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_8;gene_id=Cattle_Y_G00395;transcript_id=Cattle_Y_T00543;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	23138189	23138520	.	+	2	ID=Cattle_Y_C00564;Parent=Cattle_Y_T00543;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_8;gene_id=Cattle_Y_G00395;transcript_id=Cattle_Y_T00543;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	23164279	23164820	.	-	.	ID=Cattle_Y_G00396;Dbxref=GeneID:132344657;Name=LOC132344657;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344657;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00396;source_id=gene-LOC132344657
haplotype2-0000357	CAT	mRNA	23164279	23164820	.	-	.	ID=Cattle_Y_T00544;Parent=Cattle_Y_G00396;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;Name=XM_059884302.1;gbkey=mRNA;gene=LOC132344657;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00544;gene_id=Cattle_Y_G00396;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884302.1
haplotype2-0000357	CAT	exon	23164279	23164631	.	-	.	ID=Cattle_Y_E00694;Parent=Cattle_Y_T00544;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00544;gene_id=Cattle_Y_G00396;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-2
haplotype2-0000357	CAT	exon	23164695	23164820	.	-	.	ID=Cattle_Y_E00695;Parent=Cattle_Y_T00544;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00544;gene_id=Cattle_Y_G00396;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-1
haplotype2-0000357	CAT	CDS	23164279	23164502	.	-	0	ID=Cattle_Y_C00565;Parent=Cattle_Y_T00544;Dbxref=GeneID:132344657,GenBank:XP_059740285.1;Name=XP_059740285.1;gbkey=CDS;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740285.1_16;gene_id=Cattle_Y_G00396;transcript_id=Cattle_Y_T00544;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	23248019	23249711	.	+	.	ID=Cattle_Y_G00397;Dbxref=GeneID:132344697;Name=LOC132344697;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344697;gene_biotype=protein_coding;gene_id=Cattle_Y_G00397;source_id=gene-LOC132344697
haplotype2-0000357	CAT	mRNA	23248019	23249711	.	+	.	ID=Cattle_Y_T00545;Parent=Cattle_Y_G00397;Dbxref=GeneID:132344697,GenBank:XM_059884339.1;Name=XM_059884339.1;gbkey=mRNA;gene=LOC132344697;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 52%25 coverage of the annotated genomic feature by RNAseq alignments;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00545;gene_id=Cattle_Y_G00397;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884339.1
haplotype2-0000357	CAT	exon	23248019	23248528	.	+	.	ID=Cattle_Y_E00696;Parent=Cattle_Y_T00545;Dbxref=GeneID:132344697,GenBank:XM_059884339.1;gbkey=mRNA;gene=LOC132344697;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00545;gene_id=Cattle_Y_G00397;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884339.1-1
haplotype2-0000357	CAT	exon	23248959	23249711	.	+	.	ID=Cattle_Y_E00697;Parent=Cattle_Y_T00545;Dbxref=GeneID:132344697,GenBank:XM_059884339.1;gbkey=mRNA;gene=LOC132344697;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00545;gene_id=Cattle_Y_G00397;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884339.1-2
haplotype2-0000357	CAT	CDS	23248019	23248528	.	+	0	ID=Cattle_Y_C00566;Parent=Cattle_Y_T00545;gene_id=Cattle_Y_G00397;transcript_id=Cattle_Y_T00545;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	23248959	23249693	.	+	0	ID=Cattle_Y_C00567;Parent=Cattle_Y_T00545;gene_id=Cattle_Y_G00397;transcript_id=Cattle_Y_T00545;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	23339543	23341693	.	+	.	ID=Cattle_Y_G00398;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00398;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	23339543	23339615	.	+	.	ID=Cattle_Y_T00546;Parent=Cattle_Y_G00398;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00398;transcript_id=Cattle_Y_T00546;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	exon	23339698	23340092	.	+	.	ID=Cattle_Y_T00547;Parent=Cattle_Y_G00398;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00398;transcript_id=Cattle_Y_T00547;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	23340886	23340963	.	+	.	ID=Cattle_Y_T00548;Parent=Cattle_Y_G00398;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00398;transcript_id=Cattle_Y_T00548;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	23341147	23341258	.	+	.	ID=Cattle_Y_T00549;Parent=Cattle_Y_G00398;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00398;transcript_id=Cattle_Y_T00549;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	23341354	23341499	.	+	.	ID=Cattle_Y_T00550;Parent=Cattle_Y_G00398;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00398;transcript_id=Cattle_Y_T00550;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	23341616	23341693	.	+	.	ID=Cattle_Y_T00551;Parent=Cattle_Y_G00398;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00398;transcript_id=Cattle_Y_T00551;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	gene	23463096	23465244	.	-	.	ID=Cattle_Y_G00399;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00399;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	23463096	23463173	.	-	.	ID=Cattle_Y_T00552;Parent=Cattle_Y_G00399;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00399;transcript_id=Cattle_Y_T00552;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	exon	23463290	23463435	.	-	.	ID=Cattle_Y_T00553;Parent=Cattle_Y_G00399;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00399;transcript_id=Cattle_Y_T00553;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	23463531	23463642	.	-	.	ID=Cattle_Y_T00554;Parent=Cattle_Y_G00399;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00399;transcript_id=Cattle_Y_T00554;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	23463826	23463903	.	-	.	ID=Cattle_Y_T00555;Parent=Cattle_Y_G00399;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00399;transcript_id=Cattle_Y_T00555;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	23464695	23465089	.	-	.	ID=Cattle_Y_T00556;Parent=Cattle_Y_G00399;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00399;transcript_id=Cattle_Y_T00556;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	23465172	23465244	.	-	.	ID=Cattle_Y_T00557;Parent=Cattle_Y_G00399;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00399;transcript_id=Cattle_Y_T00557;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	gene	23556779	23557501	.	-	.	ID=Cattle_Y_G00400;Dbxref=GeneID:132344685;Name=LOC132344685;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344685;gene_biotype=protein_coding;partial=true;start_range=.,33040068;gene_id=Cattle_Y_G00400;source_id=gene-LOC132344685
haplotype2-0000357	CAT	mRNA	23556779	23557501	.	-	.	ID=Cattle_Y_T00558;Parent=Cattle_Y_G00400;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;Name=XM_059884326.1;gbkey=mRNA;gene=LOC132344685;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 42%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00558;gene_id=Cattle_Y_G00400;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884326.1
haplotype2-0000357	CAT	exon	23556779	23557501	.	-	.	ID=Cattle_Y_E00698;Parent=Cattle_Y_T00558;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;gbkey=mRNA;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00558;gene_id=Cattle_Y_G00400;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884326.1-1
haplotype2-0000357	CAT	CDS	23556779	23557381	.	-	0	ID=Cattle_Y_C00568;Parent=Cattle_Y_T00558;Dbxref=GeneID:132344685,GenBank:XP_059740309.1;Name=XP_059740309.1;gbkey=CDS;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740309.1_14;start_range=.,33040068;gene_id=Cattle_Y_G00400;transcript_id=Cattle_Y_T00558;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	23648816	23649538	.	+	.	ID=Cattle_Y_G00401;Dbxref=GeneID:132344696;Name=LOC132344696;description=heat shock transcription factor%2C Y-linked-like;end_range=37868069,.;gbkey=Gene;gene=LOC132344696;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00401;source_id=gene-LOC132344696
haplotype2-0000357	CAT	mRNA	23648816	23649538	.	+	.	ID=Cattle_Y_T00559;Parent=Cattle_Y_G00401;Dbxref=GeneID:132344696,GenBank:XM_059884338.1;Name=XM_059884338.1;end_range=37868069,.;gbkey=mRNA;gene=LOC132344696;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 83%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00559;gene_id=Cattle_Y_G00401;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884338.1
haplotype2-0000357	CAT	exon	23648816	23649538	.	+	.	ID=Cattle_Y_E00699;Parent=Cattle_Y_T00559;Dbxref=GeneID:132344696,GenBank:XM_059884338.1;end_range=37868069,.;gbkey=mRNA;gene=LOC132344696;partial=true;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00559;gene_id=Cattle_Y_G00401;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884338.1-1
haplotype2-0000357	CAT	CDS	23648936	23649538	.	+	0	ID=Cattle_Y_C00569;Parent=Cattle_Y_T00559;Dbxref=GeneID:132344696,GenBank:XP_059740321.1;Name=XP_059740321.1;end_range=37868069,.;gbkey=CDS;gene=LOC132344696;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740321.1;gene_id=Cattle_Y_G00401;transcript_id=Cattle_Y_T00559;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	23740822	23743821	.	+	.	ID=Cattle_Y_G00402;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00402;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	23840090	23871122	.	+	.	ID=Cattle_Y_G00403;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00403;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	23840090	23871122	.	+	.	ID=Cattle_Y_T00560;Parent=Cattle_Y_G00403;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00560;gene_id=Cattle_Y_G00403;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	23840090	23840229	.	+	.	ID=Cattle_Y_E00700;Parent=Cattle_Y_T00560;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00560;gene_id=Cattle_Y_G00403;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	23869296	23871122	.	+	.	ID=Cattle_Y_E00701;Parent=Cattle_Y_T00560;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00560;gene_id=Cattle_Y_G00403;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	23869523	23871122	.	+	0	ID=Cattle_Y_C00570;Parent=Cattle_Y_T00560;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_8;gene_id=Cattle_Y_G00403;transcript_id=Cattle_Y_T00560;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	23880219	23882344	.	-	.	ID=Cattle_Y_G00404;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00404;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	23880219	23882344	.	-	.	ID=Cattle_Y_T00561;Parent=Cattle_Y_G00404;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00561;gene_id=Cattle_Y_G00404;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	23880219	23880296	.	-	.	ID=Cattle_Y_E00702;Parent=Cattle_Y_T00561;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00561;gene_id=Cattle_Y_G00404;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	23880413	23880558	.	-	.	ID=Cattle_Y_E00703;Parent=Cattle_Y_T00561;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00561;gene_id=Cattle_Y_G00404;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	23880654	23880767	.	-	.	ID=Cattle_Y_E00704;Parent=Cattle_Y_T00561;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00561;gene_id=Cattle_Y_G00404;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	23880951	23881026	.	-	.	ID=Cattle_Y_E00705;Parent=Cattle_Y_T00561;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00561;gene_id=Cattle_Y_G00404;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	23881804	23882198	.	-	.	ID=Cattle_Y_E00706;Parent=Cattle_Y_T00561;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00561;gene_id=Cattle_Y_G00404;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	23882281	23882344	.	-	.	ID=Cattle_Y_E00707;Parent=Cattle_Y_T00561;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00561;gene_id=Cattle_Y_G00404;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	23880219	23880296	.	-	0	ID=Cattle_Y_C00571;Parent=Cattle_Y_T00561;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_36;gene_id=Cattle_Y_G00404;transcript_id=Cattle_Y_T00561;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	23880413	23880558	.	-	2	ID=Cattle_Y_C00572;Parent=Cattle_Y_T00561;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_36;gene_id=Cattle_Y_G00404;transcript_id=Cattle_Y_T00561;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	23880654	23880767	.	-	2	ID=Cattle_Y_C00573;Parent=Cattle_Y_T00561;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_36;gene_id=Cattle_Y_G00404;transcript_id=Cattle_Y_T00561;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	23880951	23881026	.	-	0	ID=Cattle_Y_C00574;Parent=Cattle_Y_T00561;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_36;gene_id=Cattle_Y_G00404;transcript_id=Cattle_Y_T00561;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	23881804	23882076	.	-	0	ID=Cattle_Y_C00575;Parent=Cattle_Y_T00561;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_36;gene_id=Cattle_Y_G00404;transcript_id=Cattle_Y_T00561;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	23910269	23911006	.	+	.	ID=Cattle_Y_G00405;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00405;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	23910269	23911006	.	+	.	ID=Cattle_Y_T00562;Parent=Cattle_Y_G00405;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00405;transcript_id=Cattle_Y_T00562;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	23917097	23928154	.	+	.	ID=Cattle_Y_G00406;Dbxref=GeneID:132344709;Name=LOC132344709;description=uncharacterized LOC132344709;gbkey=Gene;gene=LOC132344709;gene_biotype=lncRNA;gene_id=Cattle_Y_G00406;source_id=gene-LOC132344709
haplotype2-0000357	CAT	lnc_RNA	23917097	23928154	.	+	.	ID=Cattle_Y_T00563;Parent=Cattle_Y_G00406;Dbxref=GeneID:132344709,GenBank:XR_009493662.1;Name=XR_009493662.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=ncRNA;gene=LOC132344709;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T00563;gene_id=Cattle_Y_G00406;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=rna-XR_009493662.1
haplotype2-0000357	CAT	exon	23917097	23917205	.	+	.	ID=Cattle_Y_E00708;Parent=Cattle_Y_T00563;Dbxref=GeneID:132344709,GenBank:XR_009493662.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=ncRNA;gene=LOC132344709;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T00563;gene_id=Cattle_Y_G00406;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493662.1-1
haplotype2-0000357	CAT	exon	23926347	23928154	.	+	.	ID=Cattle_Y_E00709;Parent=Cattle_Y_T00563;Dbxref=GeneID:132344709,GenBank:XR_009493662.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=ncRNA;gene=LOC132344709;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T00563;gene_id=Cattle_Y_G00406;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493662.1-2
haplotype2-0000357	CAT	gene	23932446	23932973	.	+	.	ID=Cattle_Y_G00407;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00407;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	23932446	23932973	.	+	.	ID=Cattle_Y_T00564;Parent=Cattle_Y_G00407;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00564;gene_id=Cattle_Y_G00407;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	23932446	23932569	.	+	.	ID=Cattle_Y_E00710;Parent=Cattle_Y_T00564;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00564;gene_id=Cattle_Y_G00407;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	23932642	23932973	.	+	.	ID=Cattle_Y_E00711;Parent=Cattle_Y_T00564;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00564;gene_id=Cattle_Y_G00407;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	23932446	23932569	.	+	0	ID=Cattle_Y_C00576;Parent=Cattle_Y_T00564;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_26;gene_id=Cattle_Y_G00407;transcript_id=Cattle_Y_T00564;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	23932642	23932973	.	+	2	ID=Cattle_Y_C00577;Parent=Cattle_Y_T00564;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_26;gene_id=Cattle_Y_G00407;transcript_id=Cattle_Y_T00564;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	23958732	23959273	.	-	.	ID=Cattle_Y_G00408;Dbxref=GeneID:132344657;Name=LOC132344657;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344657;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00408;source_id=gene-LOC132344657
haplotype2-0000357	CAT	mRNA	23958732	23959273	.	-	.	ID=Cattle_Y_T00565;Parent=Cattle_Y_G00408;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;Name=XM_059884302.1;gbkey=mRNA;gene=LOC132344657;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00565;gene_id=Cattle_Y_G00408;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884302.1
haplotype2-0000357	CAT	exon	23958732	23959084	.	-	.	ID=Cattle_Y_E00712;Parent=Cattle_Y_T00565;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00565;gene_id=Cattle_Y_G00408;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-2
haplotype2-0000357	CAT	exon	23959148	23959273	.	-	.	ID=Cattle_Y_E00713;Parent=Cattle_Y_T00565;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00565;gene_id=Cattle_Y_G00408;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-1
haplotype2-0000357	CAT	CDS	23958732	23958955	.	-	0	ID=Cattle_Y_C00578;Parent=Cattle_Y_T00565;Dbxref=GeneID:132344657,GenBank:XP_059740285.1;Name=XP_059740285.1;gbkey=CDS;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740285.1_19;gene_id=Cattle_Y_G00408;transcript_id=Cattle_Y_T00565;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	24042480	24044172	.	+	.	ID=Cattle_Y_G00409;Dbxref=GeneID:132344695;Name=LOC132344695;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344695;gene_biotype=protein_coding;gene_id=Cattle_Y_G00409;source_id=gene-LOC132344695
haplotype2-0000357	CAT	mRNA	24042480	24044172	.	+	.	ID=Cattle_Y_T00566;Parent=Cattle_Y_G00409;Dbxref=GeneID:132344695,GenBank:XM_059884337.1;Name=XM_059884337.1;gbkey=mRNA;gene=LOC132344695;model_evidence=Supporting evidence includes similarity to: 4 Proteins%2C and 53%25 coverage of the annotated genomic feature by RNAseq alignments;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00566;gene_id=Cattle_Y_G00409;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884337.1
haplotype2-0000357	CAT	exon	24042480	24042989	.	+	.	ID=Cattle_Y_E00714;Parent=Cattle_Y_T00566;Dbxref=GeneID:132344695,GenBank:XM_059884337.1;gbkey=mRNA;gene=LOC132344695;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00566;gene_id=Cattle_Y_G00409;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884337.1-1
haplotype2-0000357	CAT	exon	24043420	24044172	.	+	.	ID=Cattle_Y_E00715;Parent=Cattle_Y_T00566;Dbxref=GeneID:132344695,GenBank:XM_059884337.1;gbkey=mRNA;gene=LOC132344695;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00566;gene_id=Cattle_Y_G00409;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884337.1-2
haplotype2-0000357	CAT	CDS	24042480	24042989	.	+	0	ID=Cattle_Y_C00579;Parent=Cattle_Y_T00566;gene_id=Cattle_Y_G00409;transcript_id=Cattle_Y_T00566;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	24043420	24044154	.	+	0	ID=Cattle_Y_C00580;Parent=Cattle_Y_T00566;gene_id=Cattle_Y_G00409;transcript_id=Cattle_Y_T00566;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	24248747	24250891	.	-	.	ID=Cattle_Y_G00410;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00410;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	24248747	24248824	.	-	.	ID=Cattle_Y_T00567;Parent=Cattle_Y_G00410;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00410;transcript_id=Cattle_Y_T00567;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	exon	24248941	24249086	.	-	.	ID=Cattle_Y_T00568;Parent=Cattle_Y_G00410;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00410;transcript_id=Cattle_Y_T00568;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	24249182	24249293	.	-	.	ID=Cattle_Y_T00569;Parent=Cattle_Y_G00410;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00410;transcript_id=Cattle_Y_T00569;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	24249477	24249554	.	-	.	ID=Cattle_Y_T00570;Parent=Cattle_Y_G00410;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00410;transcript_id=Cattle_Y_T00570;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	24250342	24250736	.	-	.	ID=Cattle_Y_T00571;Parent=Cattle_Y_G00410;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00410;transcript_id=Cattle_Y_T00571;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	24250819	24250891	.	-	.	ID=Cattle_Y_T00572;Parent=Cattle_Y_G00410;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00410;transcript_id=Cattle_Y_T00572;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	gene	24342437	24343000	.	-	.	ID=Cattle_Y_G00411;Dbxref=GeneID:132344694;Name=LOC132344694;description=heat shock transcription factor%2C Y-linked-like;end_range=37111691,.;gbkey=Gene;gene=LOC132344694;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00411;source_id=gene-LOC132344694
haplotype2-0000357	CAT	mRNA	24342437	24343000	.	-	.	ID=Cattle_Y_T00573;Parent=Cattle_Y_G00411;Dbxref=GeneID:132344694,GenBank:XM_059884336.1;Name=XM_059884336.1;end_range=37111691,.;gbkey=mRNA;gene=LOC132344694;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 66%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00573;gene_id=Cattle_Y_G00411;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884336.1
haplotype2-0000357	CAT	exon	24342437	24343000	.	-	.	ID=Cattle_Y_E00716;Parent=Cattle_Y_T00573;Dbxref=GeneID:132344694,GenBank:XM_059884336.1;end_range=37111691,.;gbkey=mRNA;gene=LOC132344694;partial=true;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00573;gene_id=Cattle_Y_G00411;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884336.1-1
haplotype2-0000357	CAT	CDS	24342437	24343000	.	-	0	ID=Cattle_Y_C00581;Parent=Cattle_Y_T00573;Dbxref=GeneID:132344694,GenBank:XP_059740319.1;Name=XP_059740319.1;end_range=37111691,.;gbkey=CDS;gene=LOC132344694;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740319.1;gene_id=Cattle_Y_G00411;transcript_id=Cattle_Y_T00573;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	24418711	24419285	.	+	.	ID=Cattle_Y_G00412;Dbxref=GeneID:132344660;Name=LOC132344660;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344660;gene_biotype=likely_pseudogene;partial=true;start_range=.,24728184;gene_id=Cattle_Y_G00412;source_id=gene-LOC132344660
haplotype2-0000357	CAT	mRNA	24418711	24419285	.	+	.	ID=Cattle_Y_T00574;Parent=Cattle_Y_G00412;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;Name=XM_059884305.1;gbkey=mRNA;gene=LOC132344660;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00574;gene_id=Cattle_Y_G00412;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884305.1
haplotype2-0000357	CAT	exon	24418711	24418836	.	+	.	ID=Cattle_Y_E00717;Parent=Cattle_Y_T00574;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00574;gene_id=Cattle_Y_G00412;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-1
haplotype2-0000357	CAT	exon	24418900	24419285	.	+	.	ID=Cattle_Y_E00718;Parent=Cattle_Y_T00574;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00574;gene_id=Cattle_Y_G00412;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-2
haplotype2-0000357	CAT	CDS	24419029	24419285	.	+	0	ID=Cattle_Y_C00582;Parent=Cattle_Y_T00574;Dbxref=GeneID:132344660,GenBank:XP_059740288.1;Name=XP_059740288.1;gbkey=CDS;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740288.1_11;start_range=.,24728184;gene_id=Cattle_Y_G00412;transcript_id=Cattle_Y_T00574;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	24452362	24452889	.	-	.	ID=Cattle_Y_G00413;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00413;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	24452362	24452889	.	-	.	ID=Cattle_Y_T00575;Parent=Cattle_Y_G00413;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00575;gene_id=Cattle_Y_G00413;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	24452362	24452693	.	-	.	ID=Cattle_Y_E00719;Parent=Cattle_Y_T00575;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00575;gene_id=Cattle_Y_G00413;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	exon	24452766	24452889	.	-	.	ID=Cattle_Y_E00720;Parent=Cattle_Y_T00575;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00575;gene_id=Cattle_Y_G00413;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	CDS	24452362	24452693	.	-	2	ID=Cattle_Y_C00583;Parent=Cattle_Y_T00575;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_36;gene_id=Cattle_Y_G00413;transcript_id=Cattle_Y_T00575;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	24452766	24452889	.	-	0	ID=Cattle_Y_C00584;Parent=Cattle_Y_T00575;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_36;gene_id=Cattle_Y_G00413;transcript_id=Cattle_Y_T00575;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	24457188	24468213	.	-	.	ID=Cattle_Y_G00414;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00414;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	24457188	24468213	.	-	.	ID=Cattle_Y_T00576;Parent=Cattle_Y_G00414;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00576;gene_id=Cattle_Y_G00414;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	24457188	24458995	.	-	.	ID=Cattle_Y_E00721;Parent=Cattle_Y_T00576;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00576;gene_id=Cattle_Y_G00414;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-2
haplotype2-0000357	CAT	exon	24468086	24468213	.	-	.	ID=Cattle_Y_E00722;Parent=Cattle_Y_T00576;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00576;gene_id=Cattle_Y_G00414;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	CDS	24457293	24458924	.	-	0	ID=Cattle_Y_C00585;Parent=Cattle_Y_T00576;Dbxref=GeneID:768254,GenBank:NP_001071588.1,BGD:BT17804;Name=NP_001071588.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ZNF280BY;inference=similar to AA sequence (same species):RefSeq:NP_001071588.1;product=zinc finger protein 280B;protein_id=NP_001071588.1_16;gene_id=Cattle_Y_G00414;transcript_id=Cattle_Y_T00576;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	24502825	24504946	.	+	.	ID=Cattle_Y_G00415;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00415;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	24502825	24504946	.	+	.	ID=Cattle_Y_T00577;Parent=Cattle_Y_G00415;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00577;gene_id=Cattle_Y_G00415;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	24502825	24502888	.	+	.	ID=Cattle_Y_E00723;Parent=Cattle_Y_T00577;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00577;gene_id=Cattle_Y_G00415;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	exon	24502971	24503365	.	+	.	ID=Cattle_Y_E00724;Parent=Cattle_Y_T00577;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00577;gene_id=Cattle_Y_G00415;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	24504139	24504214	.	+	.	ID=Cattle_Y_E00725;Parent=Cattle_Y_T00577;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00577;gene_id=Cattle_Y_G00415;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	24504398	24504511	.	+	.	ID=Cattle_Y_E00726;Parent=Cattle_Y_T00577;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00577;gene_id=Cattle_Y_G00415;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	24504607	24504752	.	+	.	ID=Cattle_Y_E00727;Parent=Cattle_Y_T00577;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00577;gene_id=Cattle_Y_G00415;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	24504869	24504946	.	+	.	ID=Cattle_Y_E00728;Parent=Cattle_Y_T00577;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00577;gene_id=Cattle_Y_G00415;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	CDS	24503093	24503365	.	+	0	ID=Cattle_Y_C00586;Parent=Cattle_Y_T00577;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_6;gene_id=Cattle_Y_G00415;transcript_id=Cattle_Y_T00577;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	24504139	24504214	.	+	0	ID=Cattle_Y_C00587;Parent=Cattle_Y_T00577;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_6;gene_id=Cattle_Y_G00415;transcript_id=Cattle_Y_T00577;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	24504398	24504511	.	+	2	ID=Cattle_Y_C00588;Parent=Cattle_Y_T00577;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_6;gene_id=Cattle_Y_G00415;transcript_id=Cattle_Y_T00577;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	24504607	24504752	.	+	2	ID=Cattle_Y_C00589;Parent=Cattle_Y_T00577;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_6;gene_id=Cattle_Y_G00415;transcript_id=Cattle_Y_T00577;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	24504869	24504946	.	+	0	ID=Cattle_Y_C00590;Parent=Cattle_Y_T00577;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_6;gene_id=Cattle_Y_G00415;transcript_id=Cattle_Y_T00577;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	24514039	24545070	.	-	.	ID=Cattle_Y_G00416;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00416;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	24514039	24545070	.	-	.	ID=Cattle_Y_T00578;Parent=Cattle_Y_G00416;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00578;gene_id=Cattle_Y_G00416;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	24514039	24515862	.	-	.	ID=Cattle_Y_E00729;Parent=Cattle_Y_T00578;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00578;gene_id=Cattle_Y_G00416;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	exon	24544931	24545070	.	-	.	ID=Cattle_Y_E00730;Parent=Cattle_Y_T00578;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00578;gene_id=Cattle_Y_G00416;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	CDS	24514039	24515635	.	-	0	ID=Cattle_Y_C00591;Parent=Cattle_Y_T00578;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_20;gene_id=Cattle_Y_G00416;transcript_id=Cattle_Y_T00578;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	24642337	24644497	.	-	.	ID=Cattle_Y_G00417;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00417;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	24642337	24642414	.	-	.	ID=Cattle_Y_T00579;Parent=Cattle_Y_G00417;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00417;transcript_id=Cattle_Y_T00579;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	exon	24642531	24642676	.	-	.	ID=Cattle_Y_T00580;Parent=Cattle_Y_G00417;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00417;transcript_id=Cattle_Y_T00580;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	24642772	24642883	.	-	.	ID=Cattle_Y_T00581;Parent=Cattle_Y_G00417;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00417;transcript_id=Cattle_Y_T00581;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	24643067	24643144	.	-	.	ID=Cattle_Y_T00582;Parent=Cattle_Y_G00417;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00417;transcript_id=Cattle_Y_T00582;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	24643948	24644342	.	-	.	ID=Cattle_Y_T00583;Parent=Cattle_Y_G00417;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00417;transcript_id=Cattle_Y_T00583;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	24644425	24644497	.	-	.	ID=Cattle_Y_T00584;Parent=Cattle_Y_G00417;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00417;transcript_id=Cattle_Y_T00584;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	gene	24744045	24744764	.	+	.	ID=Cattle_Y_G00418;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00418;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	24787000	24788850	.	-	.	ID=Cattle_Y_G00419;Dbxref=BGD:BT13513,GeneID:767933;Name=HSFY2;description=heat shock transcription factor%2C Y-linked 2;gbkey=Gene;gene=HSFY2;gene_biotype=protein_coding;gene_id=Cattle_Y_G00419;source_id=gene-HSFY2
haplotype2-0000357	CAT	mRNA	24787000	24788850	.	-	.	ID=Cattle_Y_T00585;Parent=Cattle_Y_G00419;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;Name=NM_001077006.1;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor%2C Y-linked 2;transcript_id=Cattle_Y_T00585;gene_id=Cattle_Y_G00419;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001077006.1
haplotype2-0000357	CAT	exon	24787000	24787813	.	-	.	ID=Cattle_Y_E00731;Parent=Cattle_Y_T00585;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;transcript_id=Cattle_Y_T00585;gene_id=Cattle_Y_G00419;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001077006.1-2
haplotype2-0000357	CAT	exon	24788244	24788850	.	-	.	ID=Cattle_Y_E00732;Parent=Cattle_Y_T00585;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;transcript_id=Cattle_Y_T00585;gene_id=Cattle_Y_G00419;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001077006.1-1
haplotype2-0000357	CAT	CDS	24787070	24787813	.	-	0	ID=Cattle_Y_C00592;Parent=Cattle_Y_T00585;Dbxref=GeneID:767933,GenBank:NP_001070474.1,BGD:BT13513;Name=NP_001070474.1;gbkey=CDS;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;protein_id=NP_001070474.1_6;gene_id=Cattle_Y_G00419;transcript_id=Cattle_Y_T00585;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	24788244	24788753	.	-	0	ID=Cattle_Y_C00593;Parent=Cattle_Y_T00585;Dbxref=GeneID:767933,GenBank:NP_001070474.1,BGD:BT13513;Name=NP_001070474.1;gbkey=CDS;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;protein_id=NP_001070474.1_6;gene_id=Cattle_Y_G00419;transcript_id=Cattle_Y_T00585;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	24795396	24796119	.	+	.	ID=Cattle_Y_G00420;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00420;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	24838381	24840231	.	-	.	ID=Cattle_Y_G00421;Dbxref=BGD:BT13513,GeneID:767933;Name=HSFY2;description=heat shock transcription factor%2C Y-linked 2;gbkey=Gene;gene=HSFY2;gene_biotype=protein_coding;gene_id=Cattle_Y_G00421;source_id=gene-HSFY2
haplotype2-0000357	CAT	mRNA	24838381	24840231	.	-	.	ID=Cattle_Y_T00586;Parent=Cattle_Y_G00421;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;Name=NM_001077006.1;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor%2C Y-linked 2;transcript_id=Cattle_Y_T00586;gene_id=Cattle_Y_G00421;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001077006.1
haplotype2-0000357	CAT	exon	24838381	24839194	.	-	.	ID=Cattle_Y_E00733;Parent=Cattle_Y_T00586;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;transcript_id=Cattle_Y_T00586;gene_id=Cattle_Y_G00421;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001077006.1-2
haplotype2-0000357	CAT	exon	24839625	24840231	.	-	.	ID=Cattle_Y_E00734;Parent=Cattle_Y_T00586;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;transcript_id=Cattle_Y_T00586;gene_id=Cattle_Y_G00421;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001077006.1-1
haplotype2-0000357	CAT	CDS	24838451	24839194	.	-	0	ID=Cattle_Y_C00594;Parent=Cattle_Y_T00586;Dbxref=GeneID:767933,GenBank:NP_001070474.1,BGD:BT13513;Name=NP_001070474.1;gbkey=CDS;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;protein_id=NP_001070474.1_4;gene_id=Cattle_Y_G00421;transcript_id=Cattle_Y_T00586;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	24839625	24840134	.	-	0	ID=Cattle_Y_C00595;Parent=Cattle_Y_T00586;Dbxref=GeneID:767933,GenBank:NP_001070474.1,BGD:BT13513;Name=NP_001070474.1;gbkey=CDS;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;protein_id=NP_001070474.1_4;gene_id=Cattle_Y_G00421;transcript_id=Cattle_Y_T00586;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	24846779	24847503	.	+	.	ID=Cattle_Y_G00422;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00422;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	24889721	24891571	.	-	.	ID=Cattle_Y_G00423;Dbxref=BGD:BT13513,GeneID:767933;Name=HSFY2;description=heat shock transcription factor%2C Y-linked 2;gbkey=Gene;gene=HSFY2;gene_biotype=protein_coding;gene_id=Cattle_Y_G00423;source_id=gene-HSFY2
haplotype2-0000357	CAT	mRNA	24889721	24891571	.	-	.	ID=Cattle_Y_T00587;Parent=Cattle_Y_G00423;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;Name=NM_001077006.1;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor%2C Y-linked 2;transcript_id=Cattle_Y_T00587;gene_id=Cattle_Y_G00423;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001077006.1
haplotype2-0000357	CAT	exon	24889721	24890534	.	-	.	ID=Cattle_Y_E00735;Parent=Cattle_Y_T00587;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;transcript_id=Cattle_Y_T00587;gene_id=Cattle_Y_G00423;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001077006.1-2
haplotype2-0000357	CAT	exon	24890965	24891571	.	-	.	ID=Cattle_Y_E00736;Parent=Cattle_Y_T00587;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;transcript_id=Cattle_Y_T00587;gene_id=Cattle_Y_G00423;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001077006.1-1
haplotype2-0000357	CAT	CDS	24889791	24890534	.	-	0	ID=Cattle_Y_C00596;Parent=Cattle_Y_T00587;Dbxref=GeneID:767933,GenBank:NP_001070474.1,BGD:BT13513;Name=NP_001070474.1;gbkey=CDS;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;protein_id=NP_001070474.1_8;gene_id=Cattle_Y_G00423;transcript_id=Cattle_Y_T00587;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	24890965	24891474	.	-	0	ID=Cattle_Y_C00597;Parent=Cattle_Y_T00587;Dbxref=GeneID:767933,GenBank:NP_001070474.1,BGD:BT13513;Name=NP_001070474.1;gbkey=CDS;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;protein_id=NP_001070474.1_8;gene_id=Cattle_Y_G00423;transcript_id=Cattle_Y_T00587;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	24982912	24983634	.	+	.	ID=Cattle_Y_G00424;Dbxref=GeneID:132344686;Name=LOC132344686;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344686;gene_biotype=protein_coding;partial=true;start_range=.,33091412;gene_id=Cattle_Y_G00424;source_id=gene-LOC132344686
haplotype2-0000357	CAT	mRNA	24982912	24983634	.	+	.	ID=Cattle_Y_T00588;Parent=Cattle_Y_G00424;Dbxref=GeneID:132344686,GenBank:XM_059884327.1;Name=XM_059884327.1;gbkey=mRNA;gene=LOC132344686;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 42%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,33091412;transcript_id=Cattle_Y_T00588;gene_id=Cattle_Y_G00424;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884327.1
haplotype2-0000357	CAT	exon	24982912	24983634	.	+	.	ID=Cattle_Y_E00737;Parent=Cattle_Y_T00588;Dbxref=GeneID:132344686,GenBank:XM_059884327.1;gbkey=mRNA;gene=LOC132344686;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,33091412;transcript_id=Cattle_Y_T00588;gene_id=Cattle_Y_G00424;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884327.1-1
haplotype2-0000357	CAT	CDS	24983032	24983634	.	+	0	ID=Cattle_Y_C00598;Parent=Cattle_Y_T00588;Dbxref=GeneID:132344686,GenBank:XP_059740310.1;Name=XP_059740310.1;gbkey=CDS;gene=LOC132344686;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740310.1;start_range=.,33091412;gene_id=Cattle_Y_G00424;transcript_id=Cattle_Y_T00588;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	25074915	25077910	.	+	.	ID=Cattle_Y_G00425;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00425;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	25242160	25244281	.	-	.	ID=Cattle_Y_G00426;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00426;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	25242160	25244281	.	-	.	ID=Cattle_Y_T00589;Parent=Cattle_Y_G00426;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00589;gene_id=Cattle_Y_G00426;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	25242160	25242237	.	-	.	ID=Cattle_Y_E00738;Parent=Cattle_Y_T00589;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00589;gene_id=Cattle_Y_G00426;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	25242354	25242499	.	-	.	ID=Cattle_Y_E00739;Parent=Cattle_Y_T00589;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00589;gene_id=Cattle_Y_G00426;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	25242595	25242708	.	-	.	ID=Cattle_Y_E00740;Parent=Cattle_Y_T00589;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00589;gene_id=Cattle_Y_G00426;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	25242892	25242967	.	-	.	ID=Cattle_Y_E00741;Parent=Cattle_Y_T00589;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00589;gene_id=Cattle_Y_G00426;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	25243741	25244135	.	-	.	ID=Cattle_Y_E00742;Parent=Cattle_Y_T00589;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00589;gene_id=Cattle_Y_G00426;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	25244218	25244281	.	-	.	ID=Cattle_Y_E00743;Parent=Cattle_Y_T00589;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00589;gene_id=Cattle_Y_G00426;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	25242160	25242237	.	-	0	ID=Cattle_Y_C00599;Parent=Cattle_Y_T00589;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_26;gene_id=Cattle_Y_G00426;transcript_id=Cattle_Y_T00589;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	25242354	25242499	.	-	2	ID=Cattle_Y_C00600;Parent=Cattle_Y_T00589;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_26;gene_id=Cattle_Y_G00426;transcript_id=Cattle_Y_T00589;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	25242595	25242708	.	-	2	ID=Cattle_Y_C00601;Parent=Cattle_Y_T00589;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_26;gene_id=Cattle_Y_G00426;transcript_id=Cattle_Y_T00589;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	25242892	25242967	.	-	0	ID=Cattle_Y_C00602;Parent=Cattle_Y_T00589;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_26;gene_id=Cattle_Y_G00426;transcript_id=Cattle_Y_T00589;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	25243741	25244013	.	-	0	ID=Cattle_Y_C00603;Parent=Cattle_Y_T00589;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_26;gene_id=Cattle_Y_G00426;transcript_id=Cattle_Y_T00589;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	25272202	25272939	.	+	.	ID=Cattle_Y_G00427;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00427;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	25272202	25272939	.	+	.	ID=Cattle_Y_T00590;Parent=Cattle_Y_G00427;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00427;transcript_id=Cattle_Y_T00590;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	25279050	25290106	.	+	.	ID=Cattle_Y_G00428;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00428;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	25279050	25290106	.	+	.	ID=Cattle_Y_T00591;Parent=Cattle_Y_G00428;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00591;gene_id=Cattle_Y_G00428;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	25279050	25279177	.	+	.	ID=Cattle_Y_E00744;Parent=Cattle_Y_T00591;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00591;gene_id=Cattle_Y_G00428;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	exon	25288299	25290106	.	+	.	ID=Cattle_Y_E00745;Parent=Cattle_Y_T00591;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00591;gene_id=Cattle_Y_G00428;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-2
haplotype2-0000357	CAT	CDS	25288370	25290001	.	+	0	ID=Cattle_Y_C00604;Parent=Cattle_Y_T00591;Dbxref=GeneID:768254,GenBank:NP_001071588.1,BGD:BT17804;Name=NP_001071588.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ZNF280BY;inference=similar to AA sequence (same species):RefSeq:NP_001071588.1;product=zinc finger protein 280B;protein_id=NP_001071588.1_1;gene_id=Cattle_Y_G00428;transcript_id=Cattle_Y_T00591;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	25294430	25294957	.	+	.	ID=Cattle_Y_G00429;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00429;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	25294430	25294957	.	+	.	ID=Cattle_Y_T00592;Parent=Cattle_Y_G00429;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00592;gene_id=Cattle_Y_G00429;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	25294430	25294553	.	+	.	ID=Cattle_Y_E00746;Parent=Cattle_Y_T00592;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00592;gene_id=Cattle_Y_G00429;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	25294626	25294957	.	+	.	ID=Cattle_Y_E00747;Parent=Cattle_Y_T00592;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00592;gene_id=Cattle_Y_G00429;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	25294430	25294553	.	+	0	ID=Cattle_Y_C00605;Parent=Cattle_Y_T00592;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_45;gene_id=Cattle_Y_G00429;transcript_id=Cattle_Y_T00592;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	25294626	25294957	.	+	2	ID=Cattle_Y_C00606;Parent=Cattle_Y_T00592;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_45;gene_id=Cattle_Y_G00429;transcript_id=Cattle_Y_T00592;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	25364329	25366179	.	-	.	ID=Cattle_Y_G00430;Dbxref=BGD:BT13513,GeneID:767933;Name=HSFY2;description=heat shock transcription factor%2C Y-linked 2;gbkey=Gene;gene=HSFY2;gene_biotype=protein_coding;gene_id=Cattle_Y_G00430;source_id=gene-HSFY2
haplotype2-0000357	CAT	mRNA	25364329	25366179	.	-	.	ID=Cattle_Y_T00593;Parent=Cattle_Y_G00430;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;Name=NM_001077006.1;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor%2C Y-linked 2;transcript_id=Cattle_Y_T00593;gene_id=Cattle_Y_G00430;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001077006.1
haplotype2-0000357	CAT	exon	25364329	25365142	.	-	.	ID=Cattle_Y_E00748;Parent=Cattle_Y_T00593;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;transcript_id=Cattle_Y_T00593;gene_id=Cattle_Y_G00430;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001077006.1-2
haplotype2-0000357	CAT	exon	25365573	25366179	.	-	.	ID=Cattle_Y_E00749;Parent=Cattle_Y_T00593;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;transcript_id=Cattle_Y_T00593;gene_id=Cattle_Y_G00430;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001077006.1-1
haplotype2-0000357	CAT	CDS	25364399	25365142	.	-	0	ID=Cattle_Y_C00607;Parent=Cattle_Y_T00593;gene_id=Cattle_Y_G00430;transcript_id=Cattle_Y_T00593;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	25365573	25366082	.	-	0	ID=Cattle_Y_C00608;Parent=Cattle_Y_T00593;gene_id=Cattle_Y_G00430;transcript_id=Cattle_Y_T00593;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	25372735	25373455	.	+	.	ID=Cattle_Y_G00431;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00431;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	25450250	25450974	.	-	.	ID=Cattle_Y_G00432;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00432;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	25457533	25459383	.	+	.	ID=Cattle_Y_G00433;Dbxref=BGD:BT13513,GeneID:767933;Name=HSFY2;description=heat shock transcription factor%2C Y-linked 2;gbkey=Gene;gene=HSFY2;gene_biotype=protein_coding;gene_id=Cattle_Y_G00433;source_id=gene-HSFY2
haplotype2-0000357	CAT	mRNA	25457533	25459383	.	+	.	ID=Cattle_Y_T00594;Parent=Cattle_Y_G00433;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;Name=NM_001077006.1;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor%2C Y-linked 2;transcript_id=Cattle_Y_T00594;gene_id=Cattle_Y_G00433;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001077006.1
haplotype2-0000357	CAT	exon	25457533	25458139	.	+	.	ID=Cattle_Y_E00750;Parent=Cattle_Y_T00594;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;transcript_id=Cattle_Y_T00594;gene_id=Cattle_Y_G00433;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001077006.1-1
haplotype2-0000357	CAT	exon	25458570	25459383	.	+	.	ID=Cattle_Y_E00751;Parent=Cattle_Y_T00594;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;transcript_id=Cattle_Y_T00594;gene_id=Cattle_Y_G00433;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001077006.1-2
haplotype2-0000357	CAT	CDS	25457630	25458139	.	+	0	ID=Cattle_Y_C00609;Parent=Cattle_Y_T00594;Dbxref=GeneID:767933,GenBank:NP_001070474.1,BGD:BT13513;Name=NP_001070474.1;gbkey=CDS;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;protein_id=NP_001070474.1;gene_id=Cattle_Y_G00433;transcript_id=Cattle_Y_T00594;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	25458570	25459313	.	+	0	ID=Cattle_Y_C00610;Parent=Cattle_Y_T00594;Dbxref=GeneID:767933,GenBank:NP_001070474.1,BGD:BT13513;Name=NP_001070474.1;gbkey=CDS;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;protein_id=NP_001070474.1;gene_id=Cattle_Y_G00433;transcript_id=Cattle_Y_T00594;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	25528743	25529270	.	-	.	ID=Cattle_Y_G00434;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00434;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	25528743	25529270	.	-	.	ID=Cattle_Y_T00595;Parent=Cattle_Y_G00434;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00595;gene_id=Cattle_Y_G00434;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	25528743	25529074	.	-	.	ID=Cattle_Y_E00752;Parent=Cattle_Y_T00595;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00595;gene_id=Cattle_Y_G00434;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	exon	25529147	25529270	.	-	.	ID=Cattle_Y_E00753;Parent=Cattle_Y_T00595;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00595;gene_id=Cattle_Y_G00434;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	CDS	25528743	25529074	.	-	2	ID=Cattle_Y_C00611;Parent=Cattle_Y_T00595;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_44;gene_id=Cattle_Y_G00434;transcript_id=Cattle_Y_T00595;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	25529147	25529270	.	-	0	ID=Cattle_Y_C00612;Parent=Cattle_Y_T00595;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_44;gene_id=Cattle_Y_G00434;transcript_id=Cattle_Y_T00595;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	25533585	25544630	.	-	.	ID=Cattle_Y_G00435;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00435;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	25533585	25544630	.	-	.	ID=Cattle_Y_T00596;Parent=Cattle_Y_G00435;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00596;gene_id=Cattle_Y_G00435;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	25533585	25535392	.	-	.	ID=Cattle_Y_E00754;Parent=Cattle_Y_T00596;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00596;gene_id=Cattle_Y_G00435;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-2
haplotype2-0000357	CAT	exon	25544503	25544630	.	-	.	ID=Cattle_Y_E00755;Parent=Cattle_Y_T00596;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00596;gene_id=Cattle_Y_G00435;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	CDS	25533690	25535321	.	-	0	ID=Cattle_Y_C00613;Parent=Cattle_Y_T00596;Dbxref=GeneID:768254,GenBank:NP_001071588.1,BGD:BT17804;Name=NP_001071588.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ZNF280BY;inference=similar to AA sequence (same species):RefSeq:NP_001071588.1;product=zinc finger protein 280B;protein_id=NP_001071588.1_4;gene_id=Cattle_Y_G00435;transcript_id=Cattle_Y_T00596;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	25579398	25581519	.	+	.	ID=Cattle_Y_G00436;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00436;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	25579398	25581519	.	+	.	ID=Cattle_Y_T00597;Parent=Cattle_Y_G00436;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00597;gene_id=Cattle_Y_G00436;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	25579398	25579461	.	+	.	ID=Cattle_Y_E00756;Parent=Cattle_Y_T00597;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00597;gene_id=Cattle_Y_G00436;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	exon	25579544	25579938	.	+	.	ID=Cattle_Y_E00757;Parent=Cattle_Y_T00597;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00597;gene_id=Cattle_Y_G00436;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	25580712	25580787	.	+	.	ID=Cattle_Y_E00758;Parent=Cattle_Y_T00597;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00597;gene_id=Cattle_Y_G00436;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	25580971	25581084	.	+	.	ID=Cattle_Y_E00759;Parent=Cattle_Y_T00597;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00597;gene_id=Cattle_Y_G00436;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	25581180	25581325	.	+	.	ID=Cattle_Y_E00760;Parent=Cattle_Y_T00597;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00597;gene_id=Cattle_Y_G00436;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	25581442	25581519	.	+	.	ID=Cattle_Y_E00761;Parent=Cattle_Y_T00597;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00597;gene_id=Cattle_Y_G00436;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	CDS	25579666	25579938	.	+	0	ID=Cattle_Y_C00614;Parent=Cattle_Y_T00597;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_8;gene_id=Cattle_Y_G00436;transcript_id=Cattle_Y_T00597;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	25580712	25580787	.	+	0	ID=Cattle_Y_C00615;Parent=Cattle_Y_T00597;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_8;gene_id=Cattle_Y_G00436;transcript_id=Cattle_Y_T00597;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	25580971	25581084	.	+	2	ID=Cattle_Y_C00616;Parent=Cattle_Y_T00597;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_8;gene_id=Cattle_Y_G00436;transcript_id=Cattle_Y_T00597;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	25581180	25581325	.	+	2	ID=Cattle_Y_C00617;Parent=Cattle_Y_T00597;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_8;gene_id=Cattle_Y_G00436;transcript_id=Cattle_Y_T00597;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	25581442	25581519	.	+	0	ID=Cattle_Y_C00618;Parent=Cattle_Y_T00597;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_8;gene_id=Cattle_Y_G00436;transcript_id=Cattle_Y_T00597;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	25718894	25721051	.	-	.	ID=Cattle_Y_G00437;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00437;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	25718894	25718971	.	-	.	ID=Cattle_Y_T00598;Parent=Cattle_Y_G00437;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00437;transcript_id=Cattle_Y_T00598;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	exon	25719088	25719233	.	-	.	ID=Cattle_Y_T00599;Parent=Cattle_Y_G00437;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00437;transcript_id=Cattle_Y_T00599;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	25719329	25719440	.	-	.	ID=Cattle_Y_T00600;Parent=Cattle_Y_G00437;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00437;transcript_id=Cattle_Y_T00600;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	25719624	25719701	.	-	.	ID=Cattle_Y_T00601;Parent=Cattle_Y_G00437;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00437;transcript_id=Cattle_Y_T00601;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	25720502	25720896	.	-	.	ID=Cattle_Y_T00602;Parent=Cattle_Y_G00437;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00437;transcript_id=Cattle_Y_T00602;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	25720979	25721051	.	-	.	ID=Cattle_Y_T00603;Parent=Cattle_Y_G00437;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00437;transcript_id=Cattle_Y_T00603;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	gene	25821384	25822112	.	+	.	ID=Cattle_Y_G00438;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00438;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	25898726	25899454	.	-	.	ID=Cattle_Y_G00439;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00439;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	25999186	26002185	.	+	.	ID=Cattle_Y_G00440;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00440;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	26098432	26129472	.	+	.	ID=Cattle_Y_G00441;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00441;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	26098432	26129472	.	+	.	ID=Cattle_Y_T00604;Parent=Cattle_Y_G00441;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00604;gene_id=Cattle_Y_G00441;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	26098432	26098571	.	+	.	ID=Cattle_Y_E00762;Parent=Cattle_Y_T00604;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00604;gene_id=Cattle_Y_G00441;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	26127647	26129472	.	+	.	ID=Cattle_Y_E00763;Parent=Cattle_Y_T00604;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00604;gene_id=Cattle_Y_G00441;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	26127874	26129472	.	+	0	ID=Cattle_Y_C00619;Parent=Cattle_Y_T00604;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_17;gene_id=Cattle_Y_G00441;transcript_id=Cattle_Y_T00604;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	26138574	26140695	.	-	.	ID=Cattle_Y_G00442;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00442;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	26138574	26140695	.	-	.	ID=Cattle_Y_T00605;Parent=Cattle_Y_G00442;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00605;gene_id=Cattle_Y_G00442;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	26138574	26138651	.	-	.	ID=Cattle_Y_E00764;Parent=Cattle_Y_T00605;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00605;gene_id=Cattle_Y_G00442;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	26138768	26138913	.	-	.	ID=Cattle_Y_E00765;Parent=Cattle_Y_T00605;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00605;gene_id=Cattle_Y_G00442;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	26139009	26139122	.	-	.	ID=Cattle_Y_E00766;Parent=Cattle_Y_T00605;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00605;gene_id=Cattle_Y_G00442;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	26139306	26139381	.	-	.	ID=Cattle_Y_E00767;Parent=Cattle_Y_T00605;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00605;gene_id=Cattle_Y_G00442;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	26140155	26140549	.	-	.	ID=Cattle_Y_E00768;Parent=Cattle_Y_T00605;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00605;gene_id=Cattle_Y_G00442;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	26140632	26140695	.	-	.	ID=Cattle_Y_E00769;Parent=Cattle_Y_T00605;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00605;gene_id=Cattle_Y_G00442;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	26138574	26138651	.	-	0	ID=Cattle_Y_C00620;Parent=Cattle_Y_T00605;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_25;gene_id=Cattle_Y_G00442;transcript_id=Cattle_Y_T00605;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	26138768	26138913	.	-	2	ID=Cattle_Y_C00621;Parent=Cattle_Y_T00605;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_25;gene_id=Cattle_Y_G00442;transcript_id=Cattle_Y_T00605;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	26139009	26139122	.	-	2	ID=Cattle_Y_C00622;Parent=Cattle_Y_T00605;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_25;gene_id=Cattle_Y_G00442;transcript_id=Cattle_Y_T00605;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	26139306	26139381	.	-	0	ID=Cattle_Y_C00623;Parent=Cattle_Y_T00605;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_25;gene_id=Cattle_Y_G00442;transcript_id=Cattle_Y_T00605;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	26140155	26140427	.	-	0	ID=Cattle_Y_C00624;Parent=Cattle_Y_T00605;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_25;gene_id=Cattle_Y_G00442;transcript_id=Cattle_Y_T00605;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	26168611	26169348	.	+	.	ID=Cattle_Y_G00443;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00443;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	26168611	26169348	.	+	.	ID=Cattle_Y_T00606;Parent=Cattle_Y_G00443;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00443;transcript_id=Cattle_Y_T00606;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	26175457	26186499	.	+	.	ID=Cattle_Y_G00444;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00444;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	26175457	26186499	.	+	.	ID=Cattle_Y_T00607;Parent=Cattle_Y_G00444;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00607;gene_id=Cattle_Y_G00444;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	26175457	26175584	.	+	.	ID=Cattle_Y_E00770;Parent=Cattle_Y_T00607;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00607;gene_id=Cattle_Y_G00444;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	exon	26184692	26186499	.	+	.	ID=Cattle_Y_E00771;Parent=Cattle_Y_T00607;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00607;gene_id=Cattle_Y_G00444;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-2
haplotype2-0000357	CAT	CDS	26184763	26186394	.	+	0	ID=Cattle_Y_C00625;Parent=Cattle_Y_T00607;Dbxref=GeneID:768254,GenBank:NP_001071588.1,BGD:BT17804;Name=NP_001071588.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ZNF280BY;inference=similar to AA sequence (same species):RefSeq:NP_001071588.1;product=zinc finger protein 280B;protein_id=NP_001071588.1_10;gene_id=Cattle_Y_G00444;transcript_id=Cattle_Y_T00607;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	26190824	26191351	.	+	.	ID=Cattle_Y_G00445;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00445;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	26190824	26191351	.	+	.	ID=Cattle_Y_T00608;Parent=Cattle_Y_G00445;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00608;gene_id=Cattle_Y_G00445;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	26190824	26190947	.	+	.	ID=Cattle_Y_E00772;Parent=Cattle_Y_T00608;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00608;gene_id=Cattle_Y_G00445;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	26191020	26191351	.	+	.	ID=Cattle_Y_E00773;Parent=Cattle_Y_T00608;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00608;gene_id=Cattle_Y_G00445;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	26190824	26190947	.	+	0	ID=Cattle_Y_C00626;Parent=Cattle_Y_T00608;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_13;gene_id=Cattle_Y_G00445;transcript_id=Cattle_Y_T00608;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	26191020	26191351	.	+	2	ID=Cattle_Y_C00627;Parent=Cattle_Y_T00608;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_13;gene_id=Cattle_Y_G00445;transcript_id=Cattle_Y_T00608;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	26261905	26262615	.	-	.	ID=Cattle_Y_G00446;Dbxref=GeneID:132344687;Name=LOC132344687;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344687;gene_biotype=protein_coding;partial=true;start_range=.,33987334;gene_id=Cattle_Y_G00446;source_id=gene-LOC132344687
haplotype2-0000357	CAT	mRNA	26261905	26262615	.	-	.	ID=Cattle_Y_T00609;Parent=Cattle_Y_G00446;Dbxref=GeneID:132344687,GenBank:XM_059884328.1;Name=XM_059884328.1;gbkey=mRNA;gene=LOC132344687;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 41%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,33987334;transcript_id=Cattle_Y_T00609;gene_id=Cattle_Y_G00446;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884328.1
haplotype2-0000357	CAT	exon	26261905	26262615	.	-	.	ID=Cattle_Y_E00774;Parent=Cattle_Y_T00609;Dbxref=GeneID:132344687,GenBank:XM_059884328.1;gbkey=mRNA;gene=LOC132344687;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,33987334;transcript_id=Cattle_Y_T00609;gene_id=Cattle_Y_G00446;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884328.1-1
haplotype2-0000357	CAT	CDS	26261905	26262495	.	-	0	ID=Cattle_Y_C00628;Parent=Cattle_Y_T00609;Dbxref=GeneID:132344687,GenBank:XP_059740311.1;Name=XP_059740311.1;gbkey=CDS;gene=LOC132344687;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740311.1;start_range=.,33987334;gene_id=Cattle_Y_G00446;transcript_id=Cattle_Y_T00609;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	26269146	26269869	.	+	.	ID=Cattle_Y_G00447;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00447;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	26346727	26347450	.	-	.	ID=Cattle_Y_G00448;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00448;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	26354004	26355854	.	+	.	ID=Cattle_Y_G00449;Dbxref=BGD:BT13513,GeneID:767933;Name=HSFY2;description=heat shock transcription factor%2C Y-linked 2;gbkey=Gene;gene=HSFY2;gene_biotype=protein_coding;gene_id=Cattle_Y_G00449;source_id=gene-HSFY2
haplotype2-0000357	CAT	mRNA	26354004	26355854	.	+	.	ID=Cattle_Y_T00610;Parent=Cattle_Y_G00449;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;Name=NM_001077006.1;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor%2C Y-linked 2;transcript_id=Cattle_Y_T00610;gene_id=Cattle_Y_G00449;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001077006.1
haplotype2-0000357	CAT	exon	26354004	26354610	.	+	.	ID=Cattle_Y_E00775;Parent=Cattle_Y_T00610;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;transcript_id=Cattle_Y_T00610;gene_id=Cattle_Y_G00449;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001077006.1-1
haplotype2-0000357	CAT	exon	26355041	26355854	.	+	.	ID=Cattle_Y_E00776;Parent=Cattle_Y_T00610;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;transcript_id=Cattle_Y_T00610;gene_id=Cattle_Y_G00449;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001077006.1-2
haplotype2-0000357	CAT	CDS	26354101	26354610	.	+	0	ID=Cattle_Y_C00629;Parent=Cattle_Y_T00610;Dbxref=GeneID:767933,GenBank:NP_001070474.1,BGD:BT13513;Name=NP_001070474.1;gbkey=CDS;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;protein_id=NP_001070474.1_1;gene_id=Cattle_Y_G00449;transcript_id=Cattle_Y_T00610;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	26355041	26355784	.	+	0	ID=Cattle_Y_C00630;Parent=Cattle_Y_T00610;Dbxref=GeneID:767933,GenBank:NP_001070474.1,BGD:BT13513;Name=NP_001070474.1;gbkey=CDS;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;protein_id=NP_001070474.1_1;gene_id=Cattle_Y_G00449;transcript_id=Cattle_Y_T00610;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	26425197	26425724	.	-	.	ID=Cattle_Y_G00450;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00450;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	26425197	26425724	.	-	.	ID=Cattle_Y_T00611;Parent=Cattle_Y_G00450;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00611;gene_id=Cattle_Y_G00450;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	26425197	26425528	.	-	.	ID=Cattle_Y_E00777;Parent=Cattle_Y_T00611;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00611;gene_id=Cattle_Y_G00450;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	exon	26425601	26425724	.	-	.	ID=Cattle_Y_E00778;Parent=Cattle_Y_T00611;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00611;gene_id=Cattle_Y_G00450;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	CDS	26425197	26425528	.	-	2	ID=Cattle_Y_C00631;Parent=Cattle_Y_T00611;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_16;gene_id=Cattle_Y_G00450;transcript_id=Cattle_Y_T00611;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	26425601	26425724	.	-	0	ID=Cattle_Y_C00632;Parent=Cattle_Y_T00611;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_16;gene_id=Cattle_Y_G00450;transcript_id=Cattle_Y_T00611;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	26430036	26441091	.	-	.	ID=Cattle_Y_G00451;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00451;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	26430036	26441091	.	-	.	ID=Cattle_Y_T00612;Parent=Cattle_Y_G00451;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00612;gene_id=Cattle_Y_G00451;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	26430036	26431843	.	-	.	ID=Cattle_Y_E00779;Parent=Cattle_Y_T00612;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00612;gene_id=Cattle_Y_G00451;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-2
haplotype2-0000357	CAT	exon	26440964	26441091	.	-	.	ID=Cattle_Y_E00780;Parent=Cattle_Y_T00612;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00612;gene_id=Cattle_Y_G00451;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	CDS	26430141	26431772	.	-	0	ID=Cattle_Y_C00633;Parent=Cattle_Y_T00612;Dbxref=GeneID:768254,GenBank:NP_001071588.1,BGD:BT17804;Name=NP_001071588.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ZNF280BY;inference=similar to AA sequence (same species):RefSeq:NP_001071588.1;product=zinc finger protein 280B;protein_id=NP_001071588.1_6;gene_id=Cattle_Y_G00451;transcript_id=Cattle_Y_T00612;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	26482716	26484839	.	+	.	ID=Cattle_Y_G00452;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00452;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	26482716	26484839	.	+	.	ID=Cattle_Y_T00613;Parent=Cattle_Y_G00452;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00613;gene_id=Cattle_Y_G00452;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	26482716	26482779	.	+	.	ID=Cattle_Y_E00781;Parent=Cattle_Y_T00613;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00613;gene_id=Cattle_Y_G00452;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	exon	26482862	26483256	.	+	.	ID=Cattle_Y_E00782;Parent=Cattle_Y_T00613;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00613;gene_id=Cattle_Y_G00452;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	26484032	26484107	.	+	.	ID=Cattle_Y_E00783;Parent=Cattle_Y_T00613;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00613;gene_id=Cattle_Y_G00452;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	26484291	26484404	.	+	.	ID=Cattle_Y_E00784;Parent=Cattle_Y_T00613;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00613;gene_id=Cattle_Y_G00452;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	26484500	26484645	.	+	.	ID=Cattle_Y_E00785;Parent=Cattle_Y_T00613;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00613;gene_id=Cattle_Y_G00452;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	26484762	26484839	.	+	.	ID=Cattle_Y_E00786;Parent=Cattle_Y_T00613;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00613;gene_id=Cattle_Y_G00452;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	CDS	26482984	26483256	.	+	0	ID=Cattle_Y_C00634;Parent=Cattle_Y_T00613;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_28;gene_id=Cattle_Y_G00452;transcript_id=Cattle_Y_T00613;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	26484032	26484107	.	+	0	ID=Cattle_Y_C00635;Parent=Cattle_Y_T00613;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_28;gene_id=Cattle_Y_G00452;transcript_id=Cattle_Y_T00613;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	26484291	26484404	.	+	2	ID=Cattle_Y_C00636;Parent=Cattle_Y_T00613;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_28;gene_id=Cattle_Y_G00452;transcript_id=Cattle_Y_T00613;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	26484500	26484645	.	+	2	ID=Cattle_Y_C00637;Parent=Cattle_Y_T00613;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_28;gene_id=Cattle_Y_G00452;transcript_id=Cattle_Y_T00613;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	26484762	26484839	.	+	0	ID=Cattle_Y_C00638;Parent=Cattle_Y_T00613;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_28;gene_id=Cattle_Y_G00452;transcript_id=Cattle_Y_T00613;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	26622251	26624410	.	-	.	ID=Cattle_Y_G00453;Dbxref=GeneID:132344655;Name=LOC132344655;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344655;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00453;source_id=gene-LOC132344655
haplotype2-0000357	CAT	exon	26622251	26622328	.	-	.	ID=Cattle_Y_T00614;Parent=Cattle_Y_G00453;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00453;transcript_id=Cattle_Y_T00614;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655
haplotype2-0000357	CAT	exon	26622445	26622590	.	-	.	ID=Cattle_Y_T00615;Parent=Cattle_Y_G00453;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00453;transcript_id=Cattle_Y_T00615;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-2
haplotype2-0000357	CAT	exon	26622686	26622797	.	-	.	ID=Cattle_Y_T00616;Parent=Cattle_Y_G00453;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00453;transcript_id=Cattle_Y_T00616;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-3
haplotype2-0000357	CAT	exon	26622981	26623058	.	-	.	ID=Cattle_Y_T00617;Parent=Cattle_Y_G00453;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00453;transcript_id=Cattle_Y_T00617;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-4
haplotype2-0000357	CAT	exon	26623861	26624255	.	-	.	ID=Cattle_Y_T00618;Parent=Cattle_Y_G00453;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00453;transcript_id=Cattle_Y_T00618;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-5
haplotype2-0000357	CAT	exon	26624338	26624410	.	-	.	ID=Cattle_Y_T00619;Parent=Cattle_Y_G00453;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00453;transcript_id=Cattle_Y_T00619;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-6
haplotype2-0000357	CAT	gene	26724024	26724747	.	+	.	ID=Cattle_Y_G00454;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00454;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	26801362	26802084	.	-	.	ID=Cattle_Y_G00455;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00455;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	26901692	26904681	.	+	.	ID=Cattle_Y_G00456;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00456;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	27001116	27032125	.	+	.	ID=Cattle_Y_G00457;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00457;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	27001116	27032125	.	+	.	ID=Cattle_Y_T00620;Parent=Cattle_Y_G00457;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00620;gene_id=Cattle_Y_G00457;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	27001116	27001255	.	+	.	ID=Cattle_Y_E00787;Parent=Cattle_Y_T00620;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00620;gene_id=Cattle_Y_G00457;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	27030288	27032125	.	+	.	ID=Cattle_Y_E00788;Parent=Cattle_Y_T00620;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00620;gene_id=Cattle_Y_G00457;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	27030515	27032125	.	+	0	ID=Cattle_Y_C00639;Parent=Cattle_Y_T00620;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_24;gene_id=Cattle_Y_G00457;transcript_id=Cattle_Y_T00620;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	27041222	27043345	.	-	.	ID=Cattle_Y_G00458;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00458;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	27041222	27043345	.	-	.	ID=Cattle_Y_T00621;Parent=Cattle_Y_G00458;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00621;gene_id=Cattle_Y_G00458;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	27041222	27041299	.	-	.	ID=Cattle_Y_E00789;Parent=Cattle_Y_T00621;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00621;gene_id=Cattle_Y_G00458;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	27041416	27041561	.	-	.	ID=Cattle_Y_E00790;Parent=Cattle_Y_T00621;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00621;gene_id=Cattle_Y_G00458;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	27041657	27041770	.	-	.	ID=Cattle_Y_E00791;Parent=Cattle_Y_T00621;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00621;gene_id=Cattle_Y_G00458;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	27041954	27042029	.	-	.	ID=Cattle_Y_E00792;Parent=Cattle_Y_T00621;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00621;gene_id=Cattle_Y_G00458;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	27042805	27043199	.	-	.	ID=Cattle_Y_E00793;Parent=Cattle_Y_T00621;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00621;gene_id=Cattle_Y_G00458;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	27043282	27043345	.	-	.	ID=Cattle_Y_E00794;Parent=Cattle_Y_T00621;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00621;gene_id=Cattle_Y_G00458;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	27041222	27041299	.	-	0	ID=Cattle_Y_C00640;Parent=Cattle_Y_T00621;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_12;gene_id=Cattle_Y_G00458;transcript_id=Cattle_Y_T00621;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	27041416	27041561	.	-	2	ID=Cattle_Y_C00641;Parent=Cattle_Y_T00621;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_12;gene_id=Cattle_Y_G00458;transcript_id=Cattle_Y_T00621;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	27041657	27041770	.	-	2	ID=Cattle_Y_C00642;Parent=Cattle_Y_T00621;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_12;gene_id=Cattle_Y_G00458;transcript_id=Cattle_Y_T00621;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	27041954	27042029	.	-	0	ID=Cattle_Y_C00643;Parent=Cattle_Y_T00621;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_12;gene_id=Cattle_Y_G00458;transcript_id=Cattle_Y_T00621;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	27042805	27043077	.	-	0	ID=Cattle_Y_C00644;Parent=Cattle_Y_T00621;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_12;gene_id=Cattle_Y_G00458;transcript_id=Cattle_Y_T00621;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	27078116	27089134	.	+	.	ID=Cattle_Y_G00459;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00459;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	27078116	27089134	.	+	.	ID=Cattle_Y_T00622;Parent=Cattle_Y_G00459;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00622;gene_id=Cattle_Y_G00459;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	27078116	27078243	.	+	.	ID=Cattle_Y_E00795;Parent=Cattle_Y_T00622;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00622;gene_id=Cattle_Y_G00459;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	exon	27087327	27089134	.	+	.	ID=Cattle_Y_E00796;Parent=Cattle_Y_T00622;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00622;gene_id=Cattle_Y_G00459;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-2
haplotype2-0000357	CAT	CDS	27087398	27089029	.	+	0	ID=Cattle_Y_C00645;Parent=Cattle_Y_T00622;Dbxref=GeneID:768254,GenBank:NP_001071588.1,BGD:BT17804;Name=NP_001071588.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ZNF280BY;inference=similar to AA sequence (same species):RefSeq:NP_001071588.1;product=zinc finger protein 280B;protein_id=NP_001071588.1_13;gene_id=Cattle_Y_G00459;transcript_id=Cattle_Y_T00622;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	27093431	27093958	.	+	.	ID=Cattle_Y_G00460;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00460;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	27093431	27093958	.	+	.	ID=Cattle_Y_T00623;Parent=Cattle_Y_G00460;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00623;gene_id=Cattle_Y_G00460;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	27093431	27093554	.	+	.	ID=Cattle_Y_E00797;Parent=Cattle_Y_T00623;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00623;gene_id=Cattle_Y_G00460;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	27093627	27093958	.	+	.	ID=Cattle_Y_E00798;Parent=Cattle_Y_T00623;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00623;gene_id=Cattle_Y_G00460;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	27093431	27093554	.	+	0	ID=Cattle_Y_C00646;Parent=Cattle_Y_T00623;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_34;gene_id=Cattle_Y_G00460;transcript_id=Cattle_Y_T00623;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	27093627	27093958	.	+	2	ID=Cattle_Y_C00647;Parent=Cattle_Y_T00623;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_34;gene_id=Cattle_Y_G00460;transcript_id=Cattle_Y_T00623;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	27164533	27165065	.	-	.	ID=Cattle_Y_G00461;Dbxref=GeneID:132344692;Name=LOC132344692;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344692;gene_biotype=protein_coding;partial=true;start_range=.,36344638;gene_id=Cattle_Y_G00461;source_id=gene-LOC132344692
haplotype2-0000357	CAT	mRNA	27164533	27165065	.	-	.	ID=Cattle_Y_T00624;Parent=Cattle_Y_G00461;Dbxref=GeneID:132344692,GenBank:XM_059884334.1;Name=XM_059884334.1;gbkey=mRNA;gene=LOC132344692;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 60%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,36344638;transcript_id=Cattle_Y_T00624;gene_id=Cattle_Y_G00461;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884334.1
haplotype2-0000357	CAT	exon	27164533	27165065	.	-	.	ID=Cattle_Y_E00799;Parent=Cattle_Y_T00624;Dbxref=GeneID:132344692,GenBank:XM_059884334.1;gbkey=mRNA;gene=LOC132344692;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,36344638;transcript_id=Cattle_Y_T00624;gene_id=Cattle_Y_G00461;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884334.1-1
haplotype2-0000357	CAT	CDS	27164533	27165039	.	-	0	ID=Cattle_Y_C00648;Parent=Cattle_Y_T00624;Dbxref=GeneID:132344692,GenBank:XP_059740317.1;Name=XP_059740317.1;gbkey=CDS;gene=LOC132344692;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740317.1_2;start_range=.,36344638;gene_id=Cattle_Y_G00461;transcript_id=Cattle_Y_T00624;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	27249093	27249816	.	-	.	ID=Cattle_Y_G00462;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00462;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	27349462	27351618	.	+	.	ID=Cattle_Y_G00463;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00463;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	27349462	27349534	.	+	.	ID=Cattle_Y_T00625;Parent=Cattle_Y_G00463;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00463;transcript_id=Cattle_Y_T00625;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	exon	27349617	27350011	.	+	.	ID=Cattle_Y_T00626;Parent=Cattle_Y_G00463;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00463;transcript_id=Cattle_Y_T00626;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	27350811	27350888	.	+	.	ID=Cattle_Y_T00627;Parent=Cattle_Y_G00463;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00463;transcript_id=Cattle_Y_T00627;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	27351072	27351183	.	+	.	ID=Cattle_Y_T00628;Parent=Cattle_Y_G00463;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00463;transcript_id=Cattle_Y_T00628;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	27351279	27351424	.	+	.	ID=Cattle_Y_T00629;Parent=Cattle_Y_G00463;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00463;transcript_id=Cattle_Y_T00629;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	27351541	27351618	.	+	.	ID=Cattle_Y_T00630;Parent=Cattle_Y_G00463;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00463;transcript_id=Cattle_Y_T00630;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	gene	27488929	27491050	.	-	.	ID=Cattle_Y_G00464;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00464;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	27488929	27491050	.	-	.	ID=Cattle_Y_T00631;Parent=Cattle_Y_G00464;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00631;gene_id=Cattle_Y_G00464;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	27488929	27489006	.	-	.	ID=Cattle_Y_E00800;Parent=Cattle_Y_T00631;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00631;gene_id=Cattle_Y_G00464;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	27489123	27489268	.	-	.	ID=Cattle_Y_E00801;Parent=Cattle_Y_T00631;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00631;gene_id=Cattle_Y_G00464;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	27489364	27489477	.	-	.	ID=Cattle_Y_E00802;Parent=Cattle_Y_T00631;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00631;gene_id=Cattle_Y_G00464;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	27489661	27489736	.	-	.	ID=Cattle_Y_E00803;Parent=Cattle_Y_T00631;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00631;gene_id=Cattle_Y_G00464;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	27490510	27490904	.	-	.	ID=Cattle_Y_E00804;Parent=Cattle_Y_T00631;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00631;gene_id=Cattle_Y_G00464;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	27490987	27491050	.	-	.	ID=Cattle_Y_E00805;Parent=Cattle_Y_T00631;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00631;gene_id=Cattle_Y_G00464;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	27488929	27489006	.	-	0	ID=Cattle_Y_C00649;Parent=Cattle_Y_T00631;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_10;gene_id=Cattle_Y_G00464;transcript_id=Cattle_Y_T00631;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	27489123	27489268	.	-	2	ID=Cattle_Y_C00650;Parent=Cattle_Y_T00631;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_10;gene_id=Cattle_Y_G00464;transcript_id=Cattle_Y_T00631;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	27489364	27489477	.	-	2	ID=Cattle_Y_C00651;Parent=Cattle_Y_T00631;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_10;gene_id=Cattle_Y_G00464;transcript_id=Cattle_Y_T00631;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	27489661	27489736	.	-	0	ID=Cattle_Y_C00652;Parent=Cattle_Y_T00631;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_10;gene_id=Cattle_Y_G00464;transcript_id=Cattle_Y_T00631;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	27490510	27490782	.	-	0	ID=Cattle_Y_C00653;Parent=Cattle_Y_T00631;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_10;gene_id=Cattle_Y_G00464;transcript_id=Cattle_Y_T00631;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	27519030	27519767	.	+	.	ID=Cattle_Y_G00465;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00465;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	27519030	27519767	.	+	.	ID=Cattle_Y_T00632;Parent=Cattle_Y_G00465;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00465;transcript_id=Cattle_Y_T00632;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	27525850	27536899	.	+	.	ID=Cattle_Y_G00466;Dbxref=GeneID:132344709;Name=LOC132344709;description=uncharacterized LOC132344709;gbkey=Gene;gene=LOC132344709;gene_biotype=lncRNA;gene_id=Cattle_Y_G00466;source_id=gene-LOC132344709
haplotype2-0000357	CAT	lnc_RNA	27525850	27536899	.	+	.	ID=Cattle_Y_T00633;Parent=Cattle_Y_G00466;Dbxref=GeneID:132344709,GenBank:XR_009493662.1;Name=XR_009493662.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=ncRNA;gene=LOC132344709;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T00633;gene_id=Cattle_Y_G00466;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=rna-XR_009493662.1
haplotype2-0000357	CAT	exon	27525850	27525958	.	+	.	ID=Cattle_Y_E00806;Parent=Cattle_Y_T00633;Dbxref=GeneID:132344709,GenBank:XR_009493662.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=ncRNA;gene=LOC132344709;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T00633;gene_id=Cattle_Y_G00466;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493662.1-1
haplotype2-0000357	CAT	exon	27535092	27536899	.	+	.	ID=Cattle_Y_E00807;Parent=Cattle_Y_T00633;Dbxref=GeneID:132344709,GenBank:XR_009493662.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=ncRNA;gene=LOC132344709;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T00633;gene_id=Cattle_Y_G00466;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493662.1-2
haplotype2-0000357	CAT	gene	27541189	27541716	.	+	.	ID=Cattle_Y_G00467;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00467;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	27541189	27541716	.	+	.	ID=Cattle_Y_T00634;Parent=Cattle_Y_G00467;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00634;gene_id=Cattle_Y_G00467;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	27541189	27541312	.	+	.	ID=Cattle_Y_E00808;Parent=Cattle_Y_T00634;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00634;gene_id=Cattle_Y_G00467;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	27541385	27541716	.	+	.	ID=Cattle_Y_E00809;Parent=Cattle_Y_T00634;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00634;gene_id=Cattle_Y_G00467;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	27541189	27541312	.	+	0	ID=Cattle_Y_C00654;Parent=Cattle_Y_T00634;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_37;gene_id=Cattle_Y_G00467;transcript_id=Cattle_Y_T00634;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	27541385	27541716	.	+	2	ID=Cattle_Y_C00655;Parent=Cattle_Y_T00634;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_37;gene_id=Cattle_Y_G00467;transcript_id=Cattle_Y_T00634;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	27567480	27568021	.	-	.	ID=Cattle_Y_G00468;Dbxref=GeneID:132344657;Name=LOC132344657;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344657;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00468;source_id=gene-LOC132344657
haplotype2-0000357	CAT	mRNA	27567480	27568021	.	-	.	ID=Cattle_Y_T00635;Parent=Cattle_Y_G00468;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;Name=XM_059884302.1;gbkey=mRNA;gene=LOC132344657;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00635;gene_id=Cattle_Y_G00468;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884302.1
haplotype2-0000357	CAT	exon	27567480	27567832	.	-	.	ID=Cattle_Y_E00810;Parent=Cattle_Y_T00635;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00635;gene_id=Cattle_Y_G00468;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-2
haplotype2-0000357	CAT	exon	27567896	27568021	.	-	.	ID=Cattle_Y_E00811;Parent=Cattle_Y_T00635;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00635;gene_id=Cattle_Y_G00468;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-1
haplotype2-0000357	CAT	CDS	27567480	27567703	.	-	0	ID=Cattle_Y_C00656;Parent=Cattle_Y_T00635;Dbxref=GeneID:132344657,GenBank:XP_059740285.1;Name=XP_059740285.1;gbkey=CDS;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740285.1_15;gene_id=Cattle_Y_G00468;transcript_id=Cattle_Y_T00635;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	27651220	27651822	.	+	.	ID=Cattle_Y_G00469;Dbxref=GeneID:132344689;Name=LOC132344689;description=heat shock transcription factor%2C Y-linked-like;end_range=34474538,.;gbkey=Gene;gene=LOC132344689;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00469;source_id=gene-LOC132344689
haplotype2-0000357	CAT	mRNA	27651220	27651822	.	+	.	ID=Cattle_Y_T00636;Parent=Cattle_Y_G00469;Dbxref=GeneID:132344689,GenBank:XM_059884330.1;Name=XM_059884330.1;end_range=34474538,.;gbkey=mRNA;gene=LOC132344689;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 39%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00636;gene_id=Cattle_Y_G00469;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884330.1
haplotype2-0000357	CAT	exon	27651220	27651822	.	+	.	ID=Cattle_Y_E00812;Parent=Cattle_Y_T00636;Dbxref=GeneID:132344689,GenBank:XM_059884330.1;end_range=34474538,.;gbkey=mRNA;gene=LOC132344689;partial=true;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00636;gene_id=Cattle_Y_G00469;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884330.1-1
haplotype2-0000357	CAT	CDS	27651220	27651822	.	+	0	ID=Cattle_Y_C00657;Parent=Cattle_Y_T00636;Dbxref=GeneID:132344689,GenBank:XP_059740313.1;Name=XP_059740313.1;end_range=34474538,.;gbkey=CDS;gene=LOC132344689;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740313.1;gene_id=Cattle_Y_G00469;transcript_id=Cattle_Y_T00636;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	27858405	27860553	.	-	.	ID=Cattle_Y_G00470;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00470;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	27858405	27858482	.	-	.	ID=Cattle_Y_T00637;Parent=Cattle_Y_G00470;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00470;transcript_id=Cattle_Y_T00637;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	exon	27858599	27858744	.	-	.	ID=Cattle_Y_T00638;Parent=Cattle_Y_G00470;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00470;transcript_id=Cattle_Y_T00638;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	27858840	27858951	.	-	.	ID=Cattle_Y_T00639;Parent=Cattle_Y_G00470;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00470;transcript_id=Cattle_Y_T00639;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	27859135	27859212	.	-	.	ID=Cattle_Y_T00640;Parent=Cattle_Y_G00470;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00470;transcript_id=Cattle_Y_T00640;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	27860004	27860398	.	-	.	ID=Cattle_Y_T00641;Parent=Cattle_Y_G00470;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00470;transcript_id=Cattle_Y_T00641;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	27860481	27860553	.	-	.	ID=Cattle_Y_T00642;Parent=Cattle_Y_G00470;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00470;transcript_id=Cattle_Y_T00642;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	gene	27952104	27952667	.	-	.	ID=Cattle_Y_G00471;Dbxref=GeneID:132344690;Name=LOC132344690;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344690;gene_biotype=protein_coding;partial=true;start_range=.,34773871;gene_id=Cattle_Y_G00471;source_id=gene-LOC132344690
haplotype2-0000357	CAT	mRNA	27952104	27952667	.	-	.	ID=Cattle_Y_T00643;Parent=Cattle_Y_G00471;Dbxref=GeneID:132344690,GenBank:XM_059884331.1;Name=XM_059884331.1;gbkey=mRNA;gene=LOC132344690;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 34%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,34773871;transcript_id=Cattle_Y_T00643;gene_id=Cattle_Y_G00471;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884331.1
haplotype2-0000357	CAT	exon	27952104	27952667	.	-	.	ID=Cattle_Y_E00813;Parent=Cattle_Y_T00643;Dbxref=GeneID:132344690,GenBank:XM_059884331.1;gbkey=mRNA;gene=LOC132344690;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,34773871;transcript_id=Cattle_Y_T00643;gene_id=Cattle_Y_G00471;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884331.1-1
haplotype2-0000357	CAT	CDS	27952104	27952667	.	-	0	ID=Cattle_Y_C00658;Parent=Cattle_Y_T00643;Dbxref=GeneID:132344690,GenBank:XP_059740314.1;Name=XP_059740314.1;gbkey=CDS;gene=LOC132344690;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740314.1;start_range=.,34773871;gene_id=Cattle_Y_G00471;transcript_id=Cattle_Y_T00643;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	28028401	28028975	.	+	.	ID=Cattle_Y_G00472;Dbxref=GeneID:132344660;Name=LOC132344660;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344660;gene_biotype=likely_pseudogene;partial=true;start_range=.,24728184;gene_id=Cattle_Y_G00472;source_id=gene-LOC132344660
haplotype2-0000357	CAT	mRNA	28028401	28028975	.	+	.	ID=Cattle_Y_T00644;Parent=Cattle_Y_G00472;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;Name=XM_059884305.1;gbkey=mRNA;gene=LOC132344660;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00644;gene_id=Cattle_Y_G00472;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884305.1
haplotype2-0000357	CAT	exon	28028401	28028526	.	+	.	ID=Cattle_Y_E00814;Parent=Cattle_Y_T00644;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00644;gene_id=Cattle_Y_G00472;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-1
haplotype2-0000357	CAT	exon	28028590	28028975	.	+	.	ID=Cattle_Y_E00815;Parent=Cattle_Y_T00644;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00644;gene_id=Cattle_Y_G00472;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-2
haplotype2-0000357	CAT	CDS	28028719	28028975	.	+	0	ID=Cattle_Y_C00659;Parent=Cattle_Y_T00644;Dbxref=GeneID:132344660,GenBank:XP_059740288.1;Name=XP_059740288.1;gbkey=CDS;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740288.1_15;start_range=.,24728184;gene_id=Cattle_Y_G00472;transcript_id=Cattle_Y_T00644;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	28062013	28062540	.	-	.	ID=Cattle_Y_G00473;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00473;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	28062013	28062540	.	-	.	ID=Cattle_Y_T00645;Parent=Cattle_Y_G00473;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00645;gene_id=Cattle_Y_G00473;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	28062013	28062344	.	-	.	ID=Cattle_Y_E00816;Parent=Cattle_Y_T00645;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00645;gene_id=Cattle_Y_G00473;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	exon	28062417	28062540	.	-	.	ID=Cattle_Y_E00817;Parent=Cattle_Y_T00645;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00645;gene_id=Cattle_Y_G00473;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	CDS	28062013	28062344	.	-	2	ID=Cattle_Y_C00660;Parent=Cattle_Y_T00645;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_31;gene_id=Cattle_Y_G00473;transcript_id=Cattle_Y_T00645;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	28062417	28062540	.	-	0	ID=Cattle_Y_C00661;Parent=Cattle_Y_T00645;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_31;gene_id=Cattle_Y_G00473;transcript_id=Cattle_Y_T00645;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	28066841	28077896	.	-	.	ID=Cattle_Y_G00474;Dbxref=GeneID:132344707;Name=LOC132344707;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344707;gene_biotype=protein_coding;gene_id=Cattle_Y_G00474;source_id=gene-LOC132344707
haplotype2-0000357	CAT	mRNA	28066841	28077896	.	-	.	ID=Cattle_Y_T00646;Parent=Cattle_Y_G00474;Dbxref=GeneID:132344707,GenBank:XM_059884351.1;Name=XM_059884351.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344707;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=zinc finger protein 280B-like%2C transcript variant X1;transcript_id=Cattle_Y_T00646;gene_id=Cattle_Y_G00474;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884351.1
haplotype2-0000357	CAT	exon	28066841	28068648	.	-	.	ID=Cattle_Y_E00818;Parent=Cattle_Y_T00646;Dbxref=GeneID:132344707,GenBank:XM_059884351.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344707;product=zinc finger protein 280B-like, transcript variant X1;transcript_id=Cattle_Y_T00646;gene_id=Cattle_Y_G00474;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884351.1-2
haplotype2-0000357	CAT	exon	28077729	28077896	.	-	.	ID=Cattle_Y_E00819;Parent=Cattle_Y_T00646;Dbxref=GeneID:132344707,GenBank:XM_059884351.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344707;product=zinc finger protein 280B-like, transcript variant X1;transcript_id=Cattle_Y_T00646;gene_id=Cattle_Y_G00474;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884351.1-1
haplotype2-0000357	CAT	CDS	28066946	28068577	.	-	0	ID=Cattle_Y_C00662;Parent=Cattle_Y_T00646;Dbxref=GeneID:132344707,GenBank:XP_059740334.1;Name=XP_059740334.1;gbkey=CDS;gene=LOC132344707;product=zinc finger protein 280B-like;protein_id=XP_059740334.1;gene_id=Cattle_Y_G00474;transcript_id=Cattle_Y_T00646;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	28066841	28077896	.	-	.	ID=Cattle_Y_T00647;Parent=Cattle_Y_G00474;Dbxref=GeneID:132344707,GenBank:XM_059884352.1;Name=XM_059884352.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344707;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=zinc finger protein 280B-like%2C transcript variant X2;transcript_id=Cattle_Y_T00647;gene_id=Cattle_Y_G00474;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884352.1
haplotype2-0000357	CAT	exon	28066841	28068648	.	-	.	ID=Cattle_Y_E00820;Parent=Cattle_Y_T00647;Dbxref=GeneID:132344707,GenBank:XM_059884352.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344707;product=zinc finger protein 280B-like, transcript variant X2;transcript_id=Cattle_Y_T00647;gene_id=Cattle_Y_G00474;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884352.1-2
haplotype2-0000357	CAT	exon	28077771	28077896	.	-	.	ID=Cattle_Y_E00821;Parent=Cattle_Y_T00647;Dbxref=GeneID:132344707,GenBank:XM_059884352.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344707;product=zinc finger protein 280B-like, transcript variant X2;transcript_id=Cattle_Y_T00647;gene_id=Cattle_Y_G00474;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884352.1-1
haplotype2-0000357	CAT	CDS	28066946	28068577	.	-	0	ID=Cattle_Y_C00663;Parent=Cattle_Y_T00647;Dbxref=GeneID:132344707,GenBank:XP_059740335.1;Name=XP_059740335.1;gbkey=CDS;gene=LOC132344707;product=zinc finger protein 280B-like;protein_id=XP_059740335.1;gene_id=Cattle_Y_G00474;transcript_id=Cattle_Y_T00647;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	28112163	28114284	.	+	.	ID=Cattle_Y_G00475;Dbxref=GeneID:132344673;Name=LOC132344673;description=testis-specific Y-encoded protein 1-like;end_range=28290592,.;gbkey=Gene;gene=LOC132344673;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00475;source_id=gene-LOC132344673
haplotype2-0000357	CAT	mRNA	28112163	28114284	.	+	.	ID=Cattle_Y_T00648;Parent=Cattle_Y_G00475;Dbxref=GeneID:132344673,GenBank:XM_059884313.1;Name=XM_059884313.1;end_range=28290592,.;gbkey=mRNA;gene=LOC132344673;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00648;gene_id=Cattle_Y_G00475;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884313.1
haplotype2-0000357	CAT	exon	28112163	28112226	.	+	.	ID=Cattle_Y_E00822;Parent=Cattle_Y_T00648;Dbxref=GeneID:132344673,GenBank:XM_059884313.1;end_range=28290592,.;gbkey=mRNA;gene=LOC132344673;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00648;gene_id=Cattle_Y_G00475;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884313.1-1
haplotype2-0000357	CAT	exon	28112309	28112703	.	+	.	ID=Cattle_Y_E00823;Parent=Cattle_Y_T00648;Dbxref=GeneID:132344673,GenBank:XM_059884313.1;end_range=28290592,.;gbkey=mRNA;gene=LOC132344673;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00648;gene_id=Cattle_Y_G00475;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884313.1-1
haplotype2-0000357	CAT	exon	28113477	28113552	.	+	.	ID=Cattle_Y_E00824;Parent=Cattle_Y_T00648;Dbxref=GeneID:132344673,GenBank:XM_059884313.1;end_range=28290592,.;gbkey=mRNA;gene=LOC132344673;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00648;gene_id=Cattle_Y_G00475;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884313.1-1
haplotype2-0000357	CAT	exon	28113736	28113849	.	+	.	ID=Cattle_Y_E00825;Parent=Cattle_Y_T00648;Dbxref=GeneID:132344673,GenBank:XM_059884313.1;end_range=28290592,.;gbkey=mRNA;gene=LOC132344673;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00648;gene_id=Cattle_Y_G00475;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884313.1-1
haplotype2-0000357	CAT	exon	28113945	28114090	.	+	.	ID=Cattle_Y_E00826;Parent=Cattle_Y_T00648;Dbxref=GeneID:132344673,GenBank:XM_059884313.1;end_range=28290592,.;gbkey=mRNA;gene=LOC132344673;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00648;gene_id=Cattle_Y_G00475;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884313.1-1
haplotype2-0000357	CAT	exon	28114207	28114284	.	+	.	ID=Cattle_Y_E00827;Parent=Cattle_Y_T00648;Dbxref=GeneID:132344673,GenBank:XM_059884313.1;gbkey=mRNA;gene=LOC132344673;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00648;gene_id=Cattle_Y_G00475;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884313.1-6
haplotype2-0000357	CAT	CDS	28112163	28112226	.	+	0	ID=Cattle_Y_C00664;Parent=Cattle_Y_T00648;gene_id=Cattle_Y_G00475;transcript_id=Cattle_Y_T00648;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	28112309	28112703	.	+	2	ID=Cattle_Y_C00665;Parent=Cattle_Y_T00648;gene_id=Cattle_Y_G00475;transcript_id=Cattle_Y_T00648;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	28113477	28113552	.	+	0	ID=Cattle_Y_C00666;Parent=Cattle_Y_T00648;gene_id=Cattle_Y_G00475;transcript_id=Cattle_Y_T00648;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	28113736	28113849	.	+	2	ID=Cattle_Y_C00667;Parent=Cattle_Y_T00648;gene_id=Cattle_Y_G00475;transcript_id=Cattle_Y_T00648;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	28113945	28114090	.	+	2	ID=Cattle_Y_C00668;Parent=Cattle_Y_T00648;gene_id=Cattle_Y_G00475;transcript_id=Cattle_Y_T00648;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	28114207	28114284	.	+	0	ID=Cattle_Y_C00669;Parent=Cattle_Y_T00648;gene_id=Cattle_Y_G00475;transcript_id=Cattle_Y_T00648;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	28123958	28154933	.	-	.	ID=Cattle_Y_G00476;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00476;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	28123958	28154933	.	-	.	ID=Cattle_Y_T00649;Parent=Cattle_Y_G00476;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00649;gene_id=Cattle_Y_G00476;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	28123958	28125784	.	-	.	ID=Cattle_Y_E00828;Parent=Cattle_Y_T00649;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00649;gene_id=Cattle_Y_G00476;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	exon	28154794	28154933	.	-	.	ID=Cattle_Y_E00829;Parent=Cattle_Y_T00649;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00649;gene_id=Cattle_Y_G00476;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	CDS	28123958	28125557	.	-	0	ID=Cattle_Y_C00670;Parent=Cattle_Y_T00649;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_43;gene_id=Cattle_Y_G00476;transcript_id=Cattle_Y_T00649;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	28186062	28188214	.	-	.	ID=Cattle_Y_G00477;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00477;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	28186062	28186139	.	-	.	ID=Cattle_Y_T00650;Parent=Cattle_Y_G00477;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00477;transcript_id=Cattle_Y_T00650;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	exon	28186256	28186401	.	-	.	ID=Cattle_Y_T00651;Parent=Cattle_Y_G00477;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00477;transcript_id=Cattle_Y_T00651;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	28186497	28186608	.	-	.	ID=Cattle_Y_T00652;Parent=Cattle_Y_G00477;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00477;transcript_id=Cattle_Y_T00652;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	28186792	28186869	.	-	.	ID=Cattle_Y_T00653;Parent=Cattle_Y_G00477;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00477;transcript_id=Cattle_Y_T00653;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	28187665	28188059	.	-	.	ID=Cattle_Y_T00654;Parent=Cattle_Y_G00477;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00477;transcript_id=Cattle_Y_T00654;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	28188142	28188214	.	-	.	ID=Cattle_Y_T00655;Parent=Cattle_Y_G00477;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00477;transcript_id=Cattle_Y_T00655;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	gene	28313788	28322975	.	-	.	ID=Cattle_Y_G00478;Dbxref=GeneID:132344549;Name=LOC132344549;description=uncharacterized LOC132344549;gbkey=Gene;gene=LOC132344549;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00478;source_id=gene-LOC132344549
haplotype2-0000357	CAT	exon	28313788	28313835	.	-	.	ID=Cattle_Y_T00656;Parent=Cattle_Y_G00478;Dbxref=GeneID:132344549;gbkey=exon;gene=LOC132344549;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00478;transcript_id=Cattle_Y_T00656;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344549
haplotype2-0000357	CAT	exon	28314278	28314404	.	-	.	ID=Cattle_Y_T00657;Parent=Cattle_Y_G00478;Dbxref=GeneID:132344549;gbkey=exon;gene=LOC132344549;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00478;transcript_id=Cattle_Y_T00657;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344549-2
haplotype2-0000357	CAT	exon	28315117	28315255	.	-	.	ID=Cattle_Y_T00658;Parent=Cattle_Y_G00478;Dbxref=GeneID:132344549;gbkey=exon;gene=LOC132344549;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00478;transcript_id=Cattle_Y_T00658;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344549-3
haplotype2-0000357	CAT	exon	28322583	28322975	.	-	.	ID=Cattle_Y_T00659;Parent=Cattle_Y_G00478;Dbxref=GeneID:132344549;gbkey=exon;gene=LOC132344549;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00478;transcript_id=Cattle_Y_T00659;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344549-4
haplotype2-0000357	CAT	gene	28342371	28344214	.	-	.	ID=Cattle_Y_G00479;Dbxref=GeneID:132344680;Name=LOC132344680;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344680;gene_biotype=protein_coding;gene_id=Cattle_Y_G00479;source_id=gene-LOC132344680
haplotype2-0000357	CAT	mRNA	28342371	28344214	.	-	.	ID=Cattle_Y_T00660;Parent=Cattle_Y_G00479;Dbxref=GeneID:132344680,GenBank:XM_059884320.1;Name=XM_059884320.1;gbkey=mRNA;gene=LOC132344680;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 99%25 coverage of the annotated genomic feature by RNAseq alignments;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00660;gene_id=Cattle_Y_G00479;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884320.1
haplotype2-0000357	CAT	exon	28342371	28344214	.	-	.	ID=Cattle_Y_E00830;Parent=Cattle_Y_T00660;Dbxref=GeneID:132344680,GenBank:XM_059884320.1;gbkey=mRNA;gene=LOC132344680;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00660;gene_id=Cattle_Y_G00479;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884320.1-1
haplotype2-0000357	CAT	CDS	28342516	28344147	.	-	0	ID=Cattle_Y_C00671;Parent=Cattle_Y_T00660;gene_id=Cattle_Y_G00479;transcript_id=Cattle_Y_T00660;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	28359552	28360289	.	-	.	ID=Cattle_Y_G00480;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00480;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	28359552	28360289	.	-	.	ID=Cattle_Y_T00661;Parent=Cattle_Y_G00480;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00480;transcript_id=Cattle_Y_T00661;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	28388208	28390331	.	+	.	ID=Cattle_Y_G00481;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00481;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	28388208	28390331	.	+	.	ID=Cattle_Y_T00662;Parent=Cattle_Y_G00481;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00662;gene_id=Cattle_Y_G00481;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	28388208	28388271	.	+	.	ID=Cattle_Y_E00831;Parent=Cattle_Y_T00662;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00662;gene_id=Cattle_Y_G00481;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	exon	28388354	28388748	.	+	.	ID=Cattle_Y_E00832;Parent=Cattle_Y_T00662;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00662;gene_id=Cattle_Y_G00481;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	28389524	28389599	.	+	.	ID=Cattle_Y_E00833;Parent=Cattle_Y_T00662;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00662;gene_id=Cattle_Y_G00481;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	28389783	28389896	.	+	.	ID=Cattle_Y_E00834;Parent=Cattle_Y_T00662;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00662;gene_id=Cattle_Y_G00481;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	28389992	28390137	.	+	.	ID=Cattle_Y_E00835;Parent=Cattle_Y_T00662;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00662;gene_id=Cattle_Y_G00481;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	28390254	28390331	.	+	.	ID=Cattle_Y_E00836;Parent=Cattle_Y_T00662;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00662;gene_id=Cattle_Y_G00481;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	CDS	28388208	28388271	.	+	0	ID=Cattle_Y_C00672;Parent=Cattle_Y_T00662;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;end_range=36675566,.;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1;gene_id=Cattle_Y_G00481;transcript_id=Cattle_Y_T00662;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	28388354	28388748	.	+	2	ID=Cattle_Y_C00673;Parent=Cattle_Y_T00662;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1;gene_id=Cattle_Y_G00481;transcript_id=Cattle_Y_T00662;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	28389524	28389599	.	+	0	ID=Cattle_Y_C00674;Parent=Cattle_Y_T00662;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1;gene_id=Cattle_Y_G00481;transcript_id=Cattle_Y_T00662;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	28389783	28389896	.	+	2	ID=Cattle_Y_C00675;Parent=Cattle_Y_T00662;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1;gene_id=Cattle_Y_G00481;transcript_id=Cattle_Y_T00662;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	28389992	28390137	.	+	2	ID=Cattle_Y_C00676;Parent=Cattle_Y_T00662;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1;gene_id=Cattle_Y_G00481;transcript_id=Cattle_Y_T00662;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	28390254	28390331	.	+	0	ID=Cattle_Y_C00677;Parent=Cattle_Y_T00662;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1;gene_id=Cattle_Y_G00481;transcript_id=Cattle_Y_T00662;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	28399439	28430441	.	-	.	ID=Cattle_Y_G00482;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00482;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	28399439	28430441	.	-	.	ID=Cattle_Y_T00663;Parent=Cattle_Y_G00482;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00663;gene_id=Cattle_Y_G00482;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	28399439	28401269	.	-	.	ID=Cattle_Y_E00837;Parent=Cattle_Y_T00663;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00663;gene_id=Cattle_Y_G00482;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	exon	28430302	28430441	.	-	.	ID=Cattle_Y_E00838;Parent=Cattle_Y_T00663;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00663;gene_id=Cattle_Y_G00482;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	CDS	28399439	28401042	.	-	0	ID=Cattle_Y_C00678;Parent=Cattle_Y_T00663;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_34;gene_id=Cattle_Y_G00482;transcript_id=Cattle_Y_T00663;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	28526644	28529643	.	-	.	ID=Cattle_Y_G00483;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00483;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	28629377	28630106	.	+	.	ID=Cattle_Y_G00484;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00484;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	28718604	28719136	.	+	.	ID=Cattle_Y_G00485;Dbxref=GeneID:132344692;Name=LOC132344692;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344692;gene_biotype=protein_coding;partial=true;start_range=.,36344638;gene_id=Cattle_Y_G00485;source_id=gene-LOC132344692
haplotype2-0000357	CAT	mRNA	28718604	28719136	.	+	.	ID=Cattle_Y_T00664;Parent=Cattle_Y_G00485;Dbxref=GeneID:132344692,GenBank:XM_059884334.1;Name=XM_059884334.1;gbkey=mRNA;gene=LOC132344692;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 60%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,36344638;transcript_id=Cattle_Y_T00664;gene_id=Cattle_Y_G00485;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884334.1
haplotype2-0000357	CAT	exon	28718604	28719136	.	+	.	ID=Cattle_Y_E00839;Parent=Cattle_Y_T00664;Dbxref=GeneID:132344692,GenBank:XM_059884334.1;gbkey=mRNA;gene=LOC132344692;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,36344638;transcript_id=Cattle_Y_T00664;gene_id=Cattle_Y_G00485;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884334.1-1
haplotype2-0000357	CAT	CDS	28718630	28719136	.	+	0	ID=Cattle_Y_C00679;Parent=Cattle_Y_T00664;Dbxref=GeneID:132344692,GenBank:XP_059740317.1;Name=XP_059740317.1;gbkey=CDS;gene=LOC132344692;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740317.1_3;start_range=.,36344638;gene_id=Cattle_Y_G00485;transcript_id=Cattle_Y_T00664;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	28794551	28805616	.	-	.	ID=Cattle_Y_G00486;Dbxref=GeneID:132344707;Name=LOC132344707;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344707;gene_biotype=protein_coding;gene_id=Cattle_Y_G00486;source_id=gene-LOC132344707
haplotype2-0000357	CAT	mRNA	28794551	28805616	.	-	.	ID=Cattle_Y_T00665;Parent=Cattle_Y_G00486;Dbxref=GeneID:132344707,GenBank:XM_059884351.1;Name=XM_059884351.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344707;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=zinc finger protein 280B-like%2C transcript variant X1;transcript_id=Cattle_Y_T00665;gene_id=Cattle_Y_G00486;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884351.1
haplotype2-0000357	CAT	exon	28794551	28796358	.	-	.	ID=Cattle_Y_E00840;Parent=Cattle_Y_T00665;Dbxref=GeneID:132344707,GenBank:XM_059884351.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344707;product=zinc finger protein 280B-like, transcript variant X1;transcript_id=Cattle_Y_T00665;gene_id=Cattle_Y_G00486;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884351.1-2
haplotype2-0000357	CAT	exon	28805449	28805616	.	-	.	ID=Cattle_Y_E00841;Parent=Cattle_Y_T00665;Dbxref=GeneID:132344707,GenBank:XM_059884351.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344707;product=zinc finger protein 280B-like, transcript variant X1;transcript_id=Cattle_Y_T00665;gene_id=Cattle_Y_G00486;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884351.1-1
haplotype2-0000357	CAT	CDS	28794656	28796287	.	-	0	ID=Cattle_Y_C00680;Parent=Cattle_Y_T00665;Dbxref=GeneID:132344707,GenBank:XP_059740334.1;Name=XP_059740334.1;gbkey=CDS;gene=LOC132344707;product=zinc finger protein 280B-like;protein_id=XP_059740334.1_1;gene_id=Cattle_Y_G00486;transcript_id=Cattle_Y_T00665;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	28794551	28805616	.	-	.	ID=Cattle_Y_T00666;Parent=Cattle_Y_G00486;Dbxref=GeneID:132344707,GenBank:XM_059884352.1;Name=XM_059884352.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344707;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=zinc finger protein 280B-like%2C transcript variant X2;transcript_id=Cattle_Y_T00666;gene_id=Cattle_Y_G00486;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884352.1
haplotype2-0000357	CAT	exon	28794551	28796358	.	-	.	ID=Cattle_Y_E00842;Parent=Cattle_Y_T00666;Dbxref=GeneID:132344707,GenBank:XM_059884352.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344707;product=zinc finger protein 280B-like, transcript variant X2;transcript_id=Cattle_Y_T00666;gene_id=Cattle_Y_G00486;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884352.1-2
haplotype2-0000357	CAT	exon	28805491	28805616	.	-	.	ID=Cattle_Y_E00843;Parent=Cattle_Y_T00666;Dbxref=GeneID:132344707,GenBank:XM_059884352.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344707;product=zinc finger protein 280B-like, transcript variant X2;transcript_id=Cattle_Y_T00666;gene_id=Cattle_Y_G00486;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884352.1-1
haplotype2-0000357	CAT	CDS	28794656	28796287	.	-	0	ID=Cattle_Y_C00681;Parent=Cattle_Y_T00666;Dbxref=GeneID:132344707,GenBank:XP_059740335.1;Name=XP_059740335.1;gbkey=CDS;gene=LOC132344707;product=zinc finger protein 280B-like;protein_id=XP_059740335.1_1;gene_id=Cattle_Y_G00486;transcript_id=Cattle_Y_T00666;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	28840345	28842466	.	+	.	ID=Cattle_Y_G00487;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00487;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	28840345	28842466	.	+	.	ID=Cattle_Y_T00667;Parent=Cattle_Y_G00487;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00667;gene_id=Cattle_Y_G00487;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	28840345	28840408	.	+	.	ID=Cattle_Y_E00844;Parent=Cattle_Y_T00667;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00667;gene_id=Cattle_Y_G00487;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	exon	28840491	28840885	.	+	.	ID=Cattle_Y_E00845;Parent=Cattle_Y_T00667;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00667;gene_id=Cattle_Y_G00487;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	28841659	28841734	.	+	.	ID=Cattle_Y_E00846;Parent=Cattle_Y_T00667;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00667;gene_id=Cattle_Y_G00487;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	28841918	28842031	.	+	.	ID=Cattle_Y_E00847;Parent=Cattle_Y_T00667;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00667;gene_id=Cattle_Y_G00487;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	28842127	28842272	.	+	.	ID=Cattle_Y_E00848;Parent=Cattle_Y_T00667;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00667;gene_id=Cattle_Y_G00487;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	28842389	28842466	.	+	.	ID=Cattle_Y_E00849;Parent=Cattle_Y_T00667;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00667;gene_id=Cattle_Y_G00487;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	CDS	28840613	28840885	.	+	0	ID=Cattle_Y_C00682;Parent=Cattle_Y_T00667;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_13;gene_id=Cattle_Y_G00487;transcript_id=Cattle_Y_T00667;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	28841659	28841734	.	+	0	ID=Cattle_Y_C00683;Parent=Cattle_Y_T00667;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_13;gene_id=Cattle_Y_G00487;transcript_id=Cattle_Y_T00667;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	28841918	28842031	.	+	2	ID=Cattle_Y_C00684;Parent=Cattle_Y_T00667;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_13;gene_id=Cattle_Y_G00487;transcript_id=Cattle_Y_T00667;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	28842127	28842272	.	+	2	ID=Cattle_Y_C00685;Parent=Cattle_Y_T00667;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_13;gene_id=Cattle_Y_G00487;transcript_id=Cattle_Y_T00667;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	28842389	28842466	.	+	0	ID=Cattle_Y_C00686;Parent=Cattle_Y_T00667;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_13;gene_id=Cattle_Y_G00487;transcript_id=Cattle_Y_T00667;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	28851565	28882583	.	-	.	ID=Cattle_Y_G00488;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00488;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	28851565	28882583	.	-	.	ID=Cattle_Y_T00668;Parent=Cattle_Y_G00488;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00668;gene_id=Cattle_Y_G00488;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	28851565	28853399	.	-	.	ID=Cattle_Y_E00850;Parent=Cattle_Y_T00668;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00668;gene_id=Cattle_Y_G00488;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	exon	28882444	28882583	.	-	.	ID=Cattle_Y_E00851;Parent=Cattle_Y_T00668;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00668;gene_id=Cattle_Y_G00488;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	CDS	28851565	28853172	.	-	0	ID=Cattle_Y_C00687;Parent=Cattle_Y_T00668;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_27;gene_id=Cattle_Y_G00488;transcript_id=Cattle_Y_T00668;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	28934723	28937709	.	-	.	ID=Cattle_Y_G00489;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00489;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	29039491	29040215	.	+	.	ID=Cattle_Y_G00490;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00490;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	29124166	29124876	.	+	.	ID=Cattle_Y_G00491;Dbxref=GeneID:132344687;Name=LOC132344687;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344687;gene_biotype=protein_coding;partial=true;start_range=.,33987334;gene_id=Cattle_Y_G00491;source_id=gene-LOC132344687
haplotype2-0000357	CAT	mRNA	29124166	29124876	.	+	.	ID=Cattle_Y_T00669;Parent=Cattle_Y_G00491;Dbxref=GeneID:132344687,GenBank:XM_059884328.1;Name=XM_059884328.1;gbkey=mRNA;gene=LOC132344687;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 41%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,33987334;transcript_id=Cattle_Y_T00669;gene_id=Cattle_Y_G00491;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884328.1
haplotype2-0000357	CAT	exon	29124166	29124876	.	+	.	ID=Cattle_Y_E00852;Parent=Cattle_Y_T00669;Dbxref=GeneID:132344687,GenBank:XM_059884328.1;gbkey=mRNA;gene=LOC132344687;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,33987334;transcript_id=Cattle_Y_T00669;gene_id=Cattle_Y_G00491;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884328.1-1
haplotype2-0000357	CAT	CDS	29124286	29124876	.	+	0	ID=Cattle_Y_C00688;Parent=Cattle_Y_T00669;Dbxref=GeneID:132344687,GenBank:XP_059740311.1;Name=XP_059740311.1;gbkey=CDS;gene=LOC132344687;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740311.1_1;start_range=.,33987334;gene_id=Cattle_Y_G00491;transcript_id=Cattle_Y_T00669;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	29200235	29211255	.	-	.	ID=Cattle_Y_G00492;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00492;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	29200235	29211255	.	-	.	ID=Cattle_Y_T00670;Parent=Cattle_Y_G00492;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00670;gene_id=Cattle_Y_G00492;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	29200235	29202042	.	-	.	ID=Cattle_Y_E00853;Parent=Cattle_Y_T00670;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00670;gene_id=Cattle_Y_G00492;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	exon	29211128	29211255	.	-	.	ID=Cattle_Y_E00854;Parent=Cattle_Y_T00670;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00670;gene_id=Cattle_Y_G00492;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	CDS	29200340	29201971	.	-	0	ID=Cattle_Y_C00689;Parent=Cattle_Y_T00670;gene_id=Cattle_Y_G00492;transcript_id=Cattle_Y_T00670;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	29246027	29248148	.	+	.	ID=Cattle_Y_G00493;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00493;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	29246027	29248148	.	+	.	ID=Cattle_Y_T00671;Parent=Cattle_Y_G00493;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00671;gene_id=Cattle_Y_G00493;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	29246027	29246090	.	+	.	ID=Cattle_Y_E00855;Parent=Cattle_Y_T00671;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00671;gene_id=Cattle_Y_G00493;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	exon	29246173	29246567	.	+	.	ID=Cattle_Y_E00856;Parent=Cattle_Y_T00671;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00671;gene_id=Cattle_Y_G00493;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	29247341	29247416	.	+	.	ID=Cattle_Y_E00857;Parent=Cattle_Y_T00671;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00671;gene_id=Cattle_Y_G00493;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	29247600	29247713	.	+	.	ID=Cattle_Y_E00858;Parent=Cattle_Y_T00671;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00671;gene_id=Cattle_Y_G00493;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	29247809	29247954	.	+	.	ID=Cattle_Y_E00859;Parent=Cattle_Y_T00671;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00671;gene_id=Cattle_Y_G00493;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	29248071	29248148	.	+	.	ID=Cattle_Y_E00860;Parent=Cattle_Y_T00671;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00671;gene_id=Cattle_Y_G00493;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	CDS	29246295	29246567	.	+	0	ID=Cattle_Y_C00690;Parent=Cattle_Y_T00671;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_20;gene_id=Cattle_Y_G00493;transcript_id=Cattle_Y_T00671;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	29247341	29247416	.	+	0	ID=Cattle_Y_C00691;Parent=Cattle_Y_T00671;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_20;gene_id=Cattle_Y_G00493;transcript_id=Cattle_Y_T00671;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	29247600	29247713	.	+	2	ID=Cattle_Y_C00692;Parent=Cattle_Y_T00671;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_20;gene_id=Cattle_Y_G00493;transcript_id=Cattle_Y_T00671;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	29247809	29247954	.	+	2	ID=Cattle_Y_C00693;Parent=Cattle_Y_T00671;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_20;gene_id=Cattle_Y_G00493;transcript_id=Cattle_Y_T00671;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	29248071	29248148	.	+	0	ID=Cattle_Y_C00694;Parent=Cattle_Y_T00671;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_20;gene_id=Cattle_Y_G00493;transcript_id=Cattle_Y_T00671;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	29340409	29343395	.	-	.	ID=Cattle_Y_G00494;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00494;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	29445148	29445874	.	+	.	ID=Cattle_Y_G00495;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00495;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	29524162	29524885	.	-	.	ID=Cattle_Y_G00496;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00496;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	29624734	29627713	.	+	.	ID=Cattle_Y_G00497;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00497;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	29724025	29755049	.	+	.	ID=Cattle_Y_G00498;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00498;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	29724025	29755049	.	+	.	ID=Cattle_Y_T00672;Parent=Cattle_Y_G00498;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00672;gene_id=Cattle_Y_G00498;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	29724025	29724164	.	+	.	ID=Cattle_Y_E00861;Parent=Cattle_Y_T00672;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00672;gene_id=Cattle_Y_G00498;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	29753225	29755049	.	+	.	ID=Cattle_Y_E00862;Parent=Cattle_Y_T00672;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00672;gene_id=Cattle_Y_G00498;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	29753452	29755049	.	+	0	ID=Cattle_Y_C00695;Parent=Cattle_Y_T00672;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_35;gene_id=Cattle_Y_G00498;transcript_id=Cattle_Y_T00672;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	29764147	29766268	.	-	.	ID=Cattle_Y_G00499;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00499;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	29764147	29766268	.	-	.	ID=Cattle_Y_T00673;Parent=Cattle_Y_G00499;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00673;gene_id=Cattle_Y_G00499;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	29764147	29764224	.	-	.	ID=Cattle_Y_E00863;Parent=Cattle_Y_T00673;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00673;gene_id=Cattle_Y_G00499;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	29764341	29764486	.	-	.	ID=Cattle_Y_E00864;Parent=Cattle_Y_T00673;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00673;gene_id=Cattle_Y_G00499;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	29764582	29764695	.	-	.	ID=Cattle_Y_E00865;Parent=Cattle_Y_T00673;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00673;gene_id=Cattle_Y_G00499;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	29764879	29764954	.	-	.	ID=Cattle_Y_E00866;Parent=Cattle_Y_T00673;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00673;gene_id=Cattle_Y_G00499;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	29765728	29766122	.	-	.	ID=Cattle_Y_E00867;Parent=Cattle_Y_T00673;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00673;gene_id=Cattle_Y_G00499;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	29766205	29766268	.	-	.	ID=Cattle_Y_E00868;Parent=Cattle_Y_T00673;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00673;gene_id=Cattle_Y_G00499;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	29764147	29764224	.	-	0	ID=Cattle_Y_C00696;Parent=Cattle_Y_T00673;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_19;gene_id=Cattle_Y_G00499;transcript_id=Cattle_Y_T00673;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	29764341	29764486	.	-	2	ID=Cattle_Y_C00697;Parent=Cattle_Y_T00673;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_19;gene_id=Cattle_Y_G00499;transcript_id=Cattle_Y_T00673;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	29764582	29764695	.	-	2	ID=Cattle_Y_C00698;Parent=Cattle_Y_T00673;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_19;gene_id=Cattle_Y_G00499;transcript_id=Cattle_Y_T00673;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	29764879	29764954	.	-	0	ID=Cattle_Y_C00699;Parent=Cattle_Y_T00673;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_19;gene_id=Cattle_Y_G00499;transcript_id=Cattle_Y_T00673;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	29765728	29766000	.	-	0	ID=Cattle_Y_C00700;Parent=Cattle_Y_T00673;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_19;gene_id=Cattle_Y_G00499;transcript_id=Cattle_Y_T00673;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	29801030	29812066	.	+	.	ID=Cattle_Y_G00500;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00500;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	29801030	29812066	.	+	.	ID=Cattle_Y_T00674;Parent=Cattle_Y_G00500;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00674;gene_id=Cattle_Y_G00500;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	29801030	29801157	.	+	.	ID=Cattle_Y_E00869;Parent=Cattle_Y_T00674;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00674;gene_id=Cattle_Y_G00500;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	exon	29810259	29812066	.	+	.	ID=Cattle_Y_E00870;Parent=Cattle_Y_T00674;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00674;gene_id=Cattle_Y_G00500;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-2
haplotype2-0000357	CAT	CDS	29810330	29811961	.	+	0	ID=Cattle_Y_C00701;Parent=Cattle_Y_T00674;Dbxref=GeneID:768254,GenBank:NP_001071588.1,BGD:BT17804;Name=NP_001071588.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ZNF280BY;inference=similar to AA sequence (same species):RefSeq:NP_001071588.1;product=zinc finger protein 280B;protein_id=NP_001071588.1_14;gene_id=Cattle_Y_G00500;transcript_id=Cattle_Y_T00674;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	29816384	29816911	.	+	.	ID=Cattle_Y_G00501;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00501;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	29816384	29816911	.	+	.	ID=Cattle_Y_T00675;Parent=Cattle_Y_G00501;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00675;gene_id=Cattle_Y_G00501;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	29816384	29816507	.	+	.	ID=Cattle_Y_E00871;Parent=Cattle_Y_T00675;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00675;gene_id=Cattle_Y_G00501;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	29816580	29816911	.	+	.	ID=Cattle_Y_E00872;Parent=Cattle_Y_T00675;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00675;gene_id=Cattle_Y_G00501;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	29816384	29816507	.	+	0	ID=Cattle_Y_C00702;Parent=Cattle_Y_T00675;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_17;gene_id=Cattle_Y_G00501;transcript_id=Cattle_Y_T00675;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	29816580	29816911	.	+	2	ID=Cattle_Y_C00703;Parent=Cattle_Y_T00675;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_17;gene_id=Cattle_Y_G00501;transcript_id=Cattle_Y_T00675;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	29886067	29887917	.	-	.	ID=Cattle_Y_G00502;Dbxref=BGD:BT13513,GeneID:767933;Name=HSFY2;description=heat shock transcription factor%2C Y-linked 2;gbkey=Gene;gene=HSFY2;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00502;source_id=gene-HSFY2
haplotype2-0000357	CAT	mRNA	29886067	29887917	.	-	.	ID=Cattle_Y_T00676;Parent=Cattle_Y_G00502;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;Name=NM_001077006.1;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor%2C Y-linked 2;transcript_id=Cattle_Y_T00676;gene_id=Cattle_Y_G00502;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001077006.1
haplotype2-0000357	CAT	exon	29886067	29886880	.	-	.	ID=Cattle_Y_E00873;Parent=Cattle_Y_T00676;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;transcript_id=Cattle_Y_T00676;gene_id=Cattle_Y_G00502;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001077006.1-2
haplotype2-0000357	CAT	exon	29887311	29887917	.	-	.	ID=Cattle_Y_E00874;Parent=Cattle_Y_T00676;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;transcript_id=Cattle_Y_T00676;gene_id=Cattle_Y_G00502;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001077006.1-1
haplotype2-0000357	CAT	CDS	29886137	29886880	.	-	0	ID=Cattle_Y_C00704;Parent=Cattle_Y_T00676;Dbxref=GeneID:767933,GenBank:NP_001070474.1,BGD:BT13513;Name=NP_001070474.1;gbkey=CDS;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;protein_id=NP_001070474.1_9;gene_id=Cattle_Y_G00502;transcript_id=Cattle_Y_T00676;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	CDS	29887311	29887820	.	-	0	ID=Cattle_Y_C00705;Parent=Cattle_Y_T00676;Dbxref=GeneID:767933,GenBank:NP_001070474.1,BGD:BT13513;Name=NP_001070474.1;gbkey=CDS;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;protein_id=NP_001070474.1_9;gene_id=Cattle_Y_G00502;transcript_id=Cattle_Y_T00676;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	29894471	29895193	.	+	.	ID=Cattle_Y_G00503;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00503;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	29971957	29972678	.	-	.	ID=Cattle_Y_G00504;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00504;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	29979207	29979929	.	+	.	ID=Cattle_Y_G00505;Dbxref=GeneID:132344685;Name=LOC132344685;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344685;gene_biotype=protein_coding;partial=true;start_range=.,33040068;gene_id=Cattle_Y_G00505;source_id=gene-LOC132344685
haplotype2-0000357	CAT	mRNA	29979207	29979929	.	+	.	ID=Cattle_Y_T00677;Parent=Cattle_Y_G00505;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;Name=XM_059884326.1;gbkey=mRNA;gene=LOC132344685;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 42%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00677;gene_id=Cattle_Y_G00505;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884326.1
haplotype2-0000357	CAT	exon	29979207	29979929	.	+	.	ID=Cattle_Y_E00875;Parent=Cattle_Y_T00677;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;gbkey=mRNA;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00677;gene_id=Cattle_Y_G00505;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884326.1-1
haplotype2-0000357	CAT	CDS	29979327	29979929	.	+	0	ID=Cattle_Y_C00706;Parent=Cattle_Y_T00677;Dbxref=GeneID:132344685,GenBank:XP_059740309.1;Name=XP_059740309.1;gbkey=CDS;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740309.1_11;start_range=.,33040068;gene_id=Cattle_Y_G00505;transcript_id=Cattle_Y_T00677;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	30050411	30050938	.	-	.	ID=Cattle_Y_G00506;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00506;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	30050411	30050938	.	-	.	ID=Cattle_Y_T00678;Parent=Cattle_Y_G00506;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00678;gene_id=Cattle_Y_G00506;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	30050411	30050742	.	-	.	ID=Cattle_Y_E00876;Parent=Cattle_Y_T00678;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00678;gene_id=Cattle_Y_G00506;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	exon	30050815	30050938	.	-	.	ID=Cattle_Y_E00877;Parent=Cattle_Y_T00678;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00678;gene_id=Cattle_Y_G00506;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	CDS	30050411	30050742	.	-	2	ID=Cattle_Y_C00707;Parent=Cattle_Y_T00678;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_10;gene_id=Cattle_Y_G00506;transcript_id=Cattle_Y_T00678;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	30050815	30050938	.	-	0	ID=Cattle_Y_C00708;Parent=Cattle_Y_T00678;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_10;gene_id=Cattle_Y_G00506;transcript_id=Cattle_Y_T00678;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	30055240	30066286	.	-	.	ID=Cattle_Y_G00507;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00507;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	30055240	30066286	.	-	.	ID=Cattle_Y_T00679;Parent=Cattle_Y_G00507;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00679;gene_id=Cattle_Y_G00507;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	30055240	30057047	.	-	.	ID=Cattle_Y_E00878;Parent=Cattle_Y_T00679;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00679;gene_id=Cattle_Y_G00507;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-2
haplotype2-0000357	CAT	exon	30066159	30066286	.	-	.	ID=Cattle_Y_E00879;Parent=Cattle_Y_T00679;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00679;gene_id=Cattle_Y_G00507;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	CDS	30055345	30056976	.	-	0	ID=Cattle_Y_C00709;Parent=Cattle_Y_T00679;Dbxref=GeneID:768254,GenBank:NP_001071588.1,BGD:BT17804;Name=NP_001071588.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ZNF280BY;inference=similar to AA sequence (same species):RefSeq:NP_001071588.1;product=zinc finger protein 280B;protein_id=NP_001071588.1_11;gene_id=Cattle_Y_G00507;transcript_id=Cattle_Y_T00679;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	30072399	30073136	.	-	.	ID=Cattle_Y_G00508;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00508;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	30072399	30073136	.	-	.	ID=Cattle_Y_T00680;Parent=Cattle_Y_G00508;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00508;transcript_id=Cattle_Y_T00680;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	30097301	30099204	.	+	.	ID=Cattle_Y_G00509;Dbxref=GeneID:132344659;Name=LOC132344659;description=testis-specific Y-encoded protein 1-like;end_range=24663580,.;gbkey=Gene;gene=LOC132344659;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00509;source_id=gene-LOC132344659
haplotype2-0000357	CAT	mRNA	30097301	30099204	.	+	.	ID=Cattle_Y_T00681;Parent=Cattle_Y_G00509;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;Name=XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00681;gene_id=Cattle_Y_G00509;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884304.1
haplotype2-0000357	CAT	exon	30097301	30097621	.	+	.	ID=Cattle_Y_E00880;Parent=Cattle_Y_T00681;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00681;gene_id=Cattle_Y_G00509;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-1
haplotype2-0000357	CAT	exon	30098399	30098474	.	+	.	ID=Cattle_Y_E00881;Parent=Cattle_Y_T00681;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00681;gene_id=Cattle_Y_G00509;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-2
haplotype2-0000357	CAT	exon	30098658	30098771	.	+	.	ID=Cattle_Y_E00882;Parent=Cattle_Y_T00681;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00681;gene_id=Cattle_Y_G00509;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-3
haplotype2-0000357	CAT	exon	30098865	30099010	.	+	.	ID=Cattle_Y_E00883;Parent=Cattle_Y_T00681;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00681;gene_id=Cattle_Y_G00509;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-4
haplotype2-0000357	CAT	exon	30099127	30099204	.	+	.	ID=Cattle_Y_E00884;Parent=Cattle_Y_T00681;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00681;gene_id=Cattle_Y_G00509;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-5
haplotype2-0000357	CAT	CDS	30097301	30097621	.	+	0	ID=Cattle_Y_C00710;Parent=Cattle_Y_T00681;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;end_range=24663580,.;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_5;gene_id=Cattle_Y_G00509;transcript_id=Cattle_Y_T00681;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	30098399	30098474	.	+	0	ID=Cattle_Y_C00711;Parent=Cattle_Y_T00681;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_5;gene_id=Cattle_Y_G00509;transcript_id=Cattle_Y_T00681;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	30098658	30098771	.	+	2	ID=Cattle_Y_C00712;Parent=Cattle_Y_T00681;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_5;gene_id=Cattle_Y_G00509;transcript_id=Cattle_Y_T00681;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	30098865	30099010	.	+	2	ID=Cattle_Y_C00713;Parent=Cattle_Y_T00681;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_5;gene_id=Cattle_Y_G00509;transcript_id=Cattle_Y_T00681;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	30099127	30099204	.	+	0	ID=Cattle_Y_C00714;Parent=Cattle_Y_T00681;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_5;gene_id=Cattle_Y_G00509;transcript_id=Cattle_Y_T00681;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	30204593	30235628	.	+	.	ID=Cattle_Y_G00510;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00510;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	30204593	30235628	.	+	.	ID=Cattle_Y_T00682;Parent=Cattle_Y_G00510;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00682;gene_id=Cattle_Y_G00510;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	30204593	30204732	.	+	.	ID=Cattle_Y_E00885;Parent=Cattle_Y_T00682;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00682;gene_id=Cattle_Y_G00510;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	30233795	30235628	.	+	.	ID=Cattle_Y_E00886;Parent=Cattle_Y_T00682;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00682;gene_id=Cattle_Y_G00510;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	30234021	30235628	.	+	0	ID=Cattle_Y_C00715;Parent=Cattle_Y_T00682;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_36;gene_id=Cattle_Y_G00510;transcript_id=Cattle_Y_T00682;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	30244810	30246701	.	-	.	ID=Cattle_Y_G00511;Dbxref=GeneID:132344659;Name=LOC132344659;description=testis-specific Y-encoded protein 1-like;end_range=24663580,.;gbkey=Gene;gene=LOC132344659;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00511;source_id=gene-LOC132344659
haplotype2-0000357	CAT	mRNA	30244810	30246701	.	-	.	ID=Cattle_Y_T00683;Parent=Cattle_Y_G00511;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;Name=XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00683;gene_id=Cattle_Y_G00511;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884304.1
haplotype2-0000357	CAT	exon	30244810	30244887	.	-	.	ID=Cattle_Y_E00887;Parent=Cattle_Y_T00683;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00683;gene_id=Cattle_Y_G00511;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-5
haplotype2-0000357	CAT	exon	30245004	30245149	.	-	.	ID=Cattle_Y_E00888;Parent=Cattle_Y_T00683;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00683;gene_id=Cattle_Y_G00511;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-4
haplotype2-0000357	CAT	exon	30245245	30245358	.	-	.	ID=Cattle_Y_E00889;Parent=Cattle_Y_T00683;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00683;gene_id=Cattle_Y_G00511;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-3
haplotype2-0000357	CAT	exon	30245542	30245617	.	-	.	ID=Cattle_Y_E00890;Parent=Cattle_Y_T00683;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00683;gene_id=Cattle_Y_G00511;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-2
haplotype2-0000357	CAT	exon	30246381	30246701	.	-	.	ID=Cattle_Y_E00891;Parent=Cattle_Y_T00683;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00683;gene_id=Cattle_Y_G00511;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-1
haplotype2-0000357	CAT	CDS	30244810	30244887	.	-	0	ID=Cattle_Y_C00716;Parent=Cattle_Y_T00683;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_13;gene_id=Cattle_Y_G00511;transcript_id=Cattle_Y_T00683;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	30245004	30245149	.	-	2	ID=Cattle_Y_C00717;Parent=Cattle_Y_T00683;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_13;gene_id=Cattle_Y_G00511;transcript_id=Cattle_Y_T00683;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	30245245	30245358	.	-	2	ID=Cattle_Y_C00718;Parent=Cattle_Y_T00683;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_13;gene_id=Cattle_Y_G00511;transcript_id=Cattle_Y_T00683;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	30245542	30245617	.	-	0	ID=Cattle_Y_C00719;Parent=Cattle_Y_T00683;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_13;gene_id=Cattle_Y_G00511;transcript_id=Cattle_Y_T00683;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	30246381	30246701	.	-	0	ID=Cattle_Y_C00720;Parent=Cattle_Y_T00683;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;end_range=24663580,.;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1_13;gene_id=Cattle_Y_G00511;transcript_id=Cattle_Y_T00683;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	30284127	30295082	.	+	.	ID=Cattle_Y_G00512;Dbxref=GeneID:132344681;Name=LOC132344681;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344681;gene_biotype=protein_coding;gene_id=Cattle_Y_G00512;source_id=gene-LOC132344681
haplotype2-0000357	CAT	mRNA	30284127	30295082	.	+	.	ID=Cattle_Y_T00684;Parent=Cattle_Y_G00512;Dbxref=GeneID:132344681,GenBank:XM_059884321.1;Name=XM_059884321.1;gbkey=mRNA;gene=LOC132344681;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00684;gene_id=Cattle_Y_G00512;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884321.1
haplotype2-0000357	CAT	exon	30284127	30284252	.	+	.	ID=Cattle_Y_E00892;Parent=Cattle_Y_T00684;Dbxref=GeneID:132344681,GenBank:XM_059884321.1;gbkey=mRNA;gene=LOC132344681;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00684;gene_id=Cattle_Y_G00512;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884321.1-1
haplotype2-0000357	CAT	exon	30293275	30295082	.	+	.	ID=Cattle_Y_E00893;Parent=Cattle_Y_T00684;Dbxref=GeneID:132344681,GenBank:XM_059884321.1;gbkey=mRNA;gene=LOC132344681;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00684;gene_id=Cattle_Y_G00512;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884321.1-2
haplotype2-0000357	CAT	CDS	30293346	30294977	.	+	0	ID=Cattle_Y_C00721;Parent=Cattle_Y_T00684;gene_id=Cattle_Y_G00512;transcript_id=Cattle_Y_T00684;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	30299378	30299905	.	+	.	ID=Cattle_Y_G00513;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00513;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	30299378	30299905	.	+	.	ID=Cattle_Y_T00685;Parent=Cattle_Y_G00513;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00685;gene_id=Cattle_Y_G00513;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	30299378	30299501	.	+	.	ID=Cattle_Y_E00894;Parent=Cattle_Y_T00685;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00685;gene_id=Cattle_Y_G00513;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	30299574	30299905	.	+	.	ID=Cattle_Y_E00895;Parent=Cattle_Y_T00685;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00685;gene_id=Cattle_Y_G00513;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	30299378	30299501	.	+	0	ID=Cattle_Y_C00722;Parent=Cattle_Y_T00685;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_4;gene_id=Cattle_Y_G00513;transcript_id=Cattle_Y_T00685;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	30299574	30299905	.	+	2	ID=Cattle_Y_C00723;Parent=Cattle_Y_T00685;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_4;gene_id=Cattle_Y_G00513;transcript_id=Cattle_Y_T00685;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	30325663	30326204	.	-	.	ID=Cattle_Y_G00514;Dbxref=GeneID:132344657;Name=LOC132344657;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344657;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00514;source_id=gene-LOC132344657
haplotype2-0000357	CAT	mRNA	30325663	30326204	.	-	.	ID=Cattle_Y_T00686;Parent=Cattle_Y_G00514;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;Name=XM_059884302.1;gbkey=mRNA;gene=LOC132344657;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00686;gene_id=Cattle_Y_G00514;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884302.1
haplotype2-0000357	CAT	exon	30325663	30326015	.	-	.	ID=Cattle_Y_E00896;Parent=Cattle_Y_T00686;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00686;gene_id=Cattle_Y_G00514;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-2
haplotype2-0000357	CAT	exon	30326079	30326204	.	-	.	ID=Cattle_Y_E00897;Parent=Cattle_Y_T00686;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00686;gene_id=Cattle_Y_G00514;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-1
haplotype2-0000357	CAT	CDS	30325663	30325886	.	-	0	ID=Cattle_Y_C00724;Parent=Cattle_Y_T00686;Dbxref=GeneID:132344657,GenBank:XP_059740285.1;Name=XP_059740285.1;gbkey=CDS;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740285.1_5;gene_id=Cattle_Y_G00514;transcript_id=Cattle_Y_T00686;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	30393472	30394201	.	-	.	ID=Cattle_Y_G00515;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00515;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	30400768	30403188	.	+	.	ID=Cattle_Y_G00516;Dbxref=GeneID:132344550;Name=LOC132344550;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344550;gene_biotype=protein_coding;gene_id=Cattle_Y_G00516;source_id=gene-LOC132344550
haplotype2-0000357	CAT	mRNA	30400768	30403188	.	+	.	ID=Cattle_Y_T00687;Parent=Cattle_Y_G00516;Dbxref=GeneID:132344550,GenBank:XM_059884232.1;Name=XM_059884232.1;gbkey=mRNA;gene=LOC132344550;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 65%25 coverage of the annotated genomic feature by RNAseq alignments;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00687;gene_id=Cattle_Y_G00516;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884232.1
haplotype2-0000357	CAT	exon	30400768	30401364	.	+	.	ID=Cattle_Y_E00898;Parent=Cattle_Y_T00687;Dbxref=GeneID:132344550,GenBank:XM_059884232.1;gbkey=mRNA;gene=LOC132344550;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00687;gene_id=Cattle_Y_G00516;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884232.1-1
haplotype2-0000357	CAT	exon	30401795	30402369	.	+	.	ID=Cattle_Y_E00899;Parent=Cattle_Y_T00687;Dbxref=GeneID:132344550,GenBank:XM_059884232.1;gbkey=mRNA;gene=LOC132344550;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00687;gene_id=Cattle_Y_G00516;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884232.1-1
haplotype2-0000357	CAT	exon	30403170	30403188	.	+	.	ID=Cattle_Y_E00900;Parent=Cattle_Y_T00687;Dbxref=GeneID:132344550,GenBank:XM_059884232.1;gbkey=mRNA;gene=LOC132344550;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00687;gene_id=Cattle_Y_G00516;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884232.1-3
haplotype2-0000357	CAT	CDS	30400855	30401364	.	+	0	ID=Cattle_Y_C00725;Parent=Cattle_Y_T00687;gene_id=Cattle_Y_G00516;transcript_id=Cattle_Y_T00687;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	30401795	30402369	.	+	0	ID=Cattle_Y_C00726;Parent=Cattle_Y_T00687;gene_id=Cattle_Y_G00516;transcript_id=Cattle_Y_T00687;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	30403170	30403188	.	+	1	ID=Cattle_Y_C00727;Parent=Cattle_Y_T00687;gene_id=Cattle_Y_G00516;transcript_id=Cattle_Y_T00687;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	30607120	30609276	.	-	.	ID=Cattle_Y_G00517;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00517;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	30607120	30607197	.	-	.	ID=Cattle_Y_T00688;Parent=Cattle_Y_G00517;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00517;transcript_id=Cattle_Y_T00688;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	exon	30607314	30607459	.	-	.	ID=Cattle_Y_T00689;Parent=Cattle_Y_G00517;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00517;transcript_id=Cattle_Y_T00689;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	30607555	30607666	.	-	.	ID=Cattle_Y_T00690;Parent=Cattle_Y_G00517;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00517;transcript_id=Cattle_Y_T00690;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	30607850	30607927	.	-	.	ID=Cattle_Y_T00691;Parent=Cattle_Y_G00517;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00517;transcript_id=Cattle_Y_T00691;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	30608727	30609121	.	-	.	ID=Cattle_Y_T00692;Parent=Cattle_Y_G00517;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00517;transcript_id=Cattle_Y_T00692;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	30609204	30609276	.	-	.	ID=Cattle_Y_T00693;Parent=Cattle_Y_G00517;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00517;transcript_id=Cattle_Y_T00693;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	gene	30700294	30701016	.	-	.	ID=Cattle_Y_G00518;Dbxref=GeneID:132344691;Name=LOC132344691;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344691;gene_biotype=protein_coding;partial=true;start_range=.,35810020;gene_id=Cattle_Y_G00518;source_id=gene-LOC132344691
haplotype2-0000357	CAT	mRNA	30700294	30701016	.	-	.	ID=Cattle_Y_T00694;Parent=Cattle_Y_G00518;Dbxref=GeneID:132344691,GenBank:XM_059884333.1;Name=XM_059884333.1;gbkey=mRNA;gene=LOC132344691;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 71%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,35810020;transcript_id=Cattle_Y_T00694;gene_id=Cattle_Y_G00518;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884333.1
haplotype2-0000357	CAT	exon	30700294	30701016	.	-	.	ID=Cattle_Y_E00901;Parent=Cattle_Y_T00694;Dbxref=GeneID:132344691,GenBank:XM_059884333.1;gbkey=mRNA;gene=LOC132344691;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,35810020;transcript_id=Cattle_Y_T00694;gene_id=Cattle_Y_G00518;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884333.1-1
haplotype2-0000357	CAT	CDS	30700294	30700896	.	-	0	ID=Cattle_Y_C00728;Parent=Cattle_Y_T00694;Dbxref=GeneID:132344691,GenBank:XP_059740316.1;Name=XP_059740316.1;gbkey=CDS;gene=LOC132344691;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740316.1;start_range=.,35810020;gene_id=Cattle_Y_G00518;transcript_id=Cattle_Y_T00694;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	30776993	30777567	.	+	.	ID=Cattle_Y_G00519;Dbxref=GeneID:132344660;Name=LOC132344660;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344660;gene_biotype=likely_pseudogene;partial=true;start_range=.,24728184;gene_id=Cattle_Y_G00519;source_id=gene-LOC132344660
haplotype2-0000357	CAT	mRNA	30776993	30777567	.	+	.	ID=Cattle_Y_T00695;Parent=Cattle_Y_G00519;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;Name=XM_059884305.1;gbkey=mRNA;gene=LOC132344660;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00695;gene_id=Cattle_Y_G00519;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884305.1
haplotype2-0000357	CAT	exon	30776993	30777118	.	+	.	ID=Cattle_Y_E00902;Parent=Cattle_Y_T00695;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00695;gene_id=Cattle_Y_G00519;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-1
haplotype2-0000357	CAT	exon	30777182	30777567	.	+	.	ID=Cattle_Y_E00903;Parent=Cattle_Y_T00695;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00695;gene_id=Cattle_Y_G00519;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-2
haplotype2-0000357	CAT	CDS	30777311	30777567	.	+	0	ID=Cattle_Y_C00729;Parent=Cattle_Y_T00695;Dbxref=GeneID:132344660,GenBank:XP_059740288.1;Name=XP_059740288.1;gbkey=CDS;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740288.1_3;start_range=.,24728184;gene_id=Cattle_Y_G00519;transcript_id=Cattle_Y_T00695;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	30810587	30811114	.	-	.	ID=Cattle_Y_G00520;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00520;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	30810587	30811114	.	-	.	ID=Cattle_Y_T00696;Parent=Cattle_Y_G00520;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00696;gene_id=Cattle_Y_G00520;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	30810587	30810918	.	-	.	ID=Cattle_Y_E00904;Parent=Cattle_Y_T00696;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00696;gene_id=Cattle_Y_G00520;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	exon	30810991	30811114	.	-	.	ID=Cattle_Y_E00905;Parent=Cattle_Y_T00696;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00696;gene_id=Cattle_Y_G00520;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	CDS	30810587	30810918	.	-	2	ID=Cattle_Y_C00730;Parent=Cattle_Y_T00696;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_41;gene_id=Cattle_Y_G00520;transcript_id=Cattle_Y_T00696;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	30810991	30811114	.	-	0	ID=Cattle_Y_C00731;Parent=Cattle_Y_T00696;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_41;gene_id=Cattle_Y_G00520;transcript_id=Cattle_Y_T00696;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	30815434	30826481	.	-	.	ID=Cattle_Y_G00521;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00521;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	30815434	30826481	.	-	.	ID=Cattle_Y_T00697;Parent=Cattle_Y_G00521;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00697;gene_id=Cattle_Y_G00521;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	30815434	30817241	.	-	.	ID=Cattle_Y_E00906;Parent=Cattle_Y_T00697;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00697;gene_id=Cattle_Y_G00521;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	exon	30826354	30826481	.	-	.	ID=Cattle_Y_E00907;Parent=Cattle_Y_T00697;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00697;gene_id=Cattle_Y_G00521;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	CDS	30815539	30817170	.	-	0	ID=Cattle_Y_C00732;Parent=Cattle_Y_T00697;gene_id=Cattle_Y_G00521;transcript_id=Cattle_Y_T00697;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	30832577	30833314	.	-	.	ID=Cattle_Y_G00522;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00522;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	30832577	30833314	.	-	.	ID=Cattle_Y_T00698;Parent=Cattle_Y_G00522;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00522;transcript_id=Cattle_Y_T00698;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	30863840	30865778	.	+	.	ID=Cattle_Y_G00523;Dbxref=GeneID:132344672;Name=LOC132344672;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344672;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00523;source_id=gene-LOC132344672
haplotype2-0000357	CAT	exon	30863840	30864222	.	+	.	ID=Cattle_Y_T00699;Parent=Cattle_Y_G00523;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00523;transcript_id=Cattle_Y_T00699;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-5
haplotype2-0000357	CAT	exon	30864971	30865046	.	+	.	ID=Cattle_Y_T00700;Parent=Cattle_Y_G00523;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00523;transcript_id=Cattle_Y_T00700;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-4
haplotype2-0000357	CAT	exon	30865230	30865343	.	+	.	ID=Cattle_Y_T00701;Parent=Cattle_Y_G00523;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00523;transcript_id=Cattle_Y_T00701;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-3
haplotype2-0000357	CAT	exon	30865439	30865584	.	+	.	ID=Cattle_Y_T00702;Parent=Cattle_Y_G00523;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00523;transcript_id=Cattle_Y_T00702;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-2
haplotype2-0000357	CAT	exon	30865701	30865778	.	+	.	ID=Cattle_Y_T00703;Parent=Cattle_Y_G00523;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00523;transcript_id=Cattle_Y_T00703;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672
haplotype2-0000357	CAT	gene	30967632	30998646	.	+	.	ID=Cattle_Y_G00524;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00524;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	30967632	30998646	.	+	.	ID=Cattle_Y_T00704;Parent=Cattle_Y_G00524;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00704;gene_id=Cattle_Y_G00524;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	30967632	30967771	.	+	.	ID=Cattle_Y_E00908;Parent=Cattle_Y_T00704;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00704;gene_id=Cattle_Y_G00524;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	30996820	30998646	.	+	.	ID=Cattle_Y_E00909;Parent=Cattle_Y_T00704;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00704;gene_id=Cattle_Y_G00524;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	30997046	30998646	.	+	0	ID=Cattle_Y_C00733;Parent=Cattle_Y_T00704;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_9;gene_id=Cattle_Y_G00524;transcript_id=Cattle_Y_T00704;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	31007749	31009724	.	-	.	ID=Cattle_Y_G00525;Dbxref=GeneID:132344672;Name=LOC132344672;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344672;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00525;source_id=gene-LOC132344672
haplotype2-0000357	CAT	exon	31007749	31007826	.	-	.	ID=Cattle_Y_T00705;Parent=Cattle_Y_G00525;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00525;transcript_id=Cattle_Y_T00705;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672
haplotype2-0000357	CAT	exon	31007943	31008088	.	-	.	ID=Cattle_Y_T00706;Parent=Cattle_Y_G00525;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00525;transcript_id=Cattle_Y_T00706;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-2
haplotype2-0000357	CAT	exon	31008184	31008297	.	-	.	ID=Cattle_Y_T00707;Parent=Cattle_Y_G00525;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00525;transcript_id=Cattle_Y_T00707;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-3
haplotype2-0000357	CAT	exon	31008481	31008556	.	-	.	ID=Cattle_Y_T00708;Parent=Cattle_Y_G00525;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00525;transcript_id=Cattle_Y_T00708;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-4
haplotype2-0000357	CAT	exon	31009342	31009724	.	-	.	ID=Cattle_Y_T00709;Parent=Cattle_Y_G00525;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00525;transcript_id=Cattle_Y_T00709;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-5
haplotype2-0000357	CAT	gene	31040271	31041008	.	+	.	ID=Cattle_Y_G00526;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00526;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	31040271	31041008	.	+	.	ID=Cattle_Y_T00710;Parent=Cattle_Y_G00526;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00526;transcript_id=Cattle_Y_T00710;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	31047093	31058112	.	+	.	ID=Cattle_Y_G00527;Dbxref=GeneID:132344705;Name=LOC132344705;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344705;gene_biotype=protein_coding;gene_id=Cattle_Y_G00527;source_id=gene-LOC132344705
haplotype2-0000357	CAT	mRNA	31047093	31058112	.	+	.	ID=Cattle_Y_T00711;Parent=Cattle_Y_G00527;Dbxref=GeneID:132344705,GenBank:XM_059884349.1;Name=XM_059884349.1;gbkey=mRNA;gene=LOC132344705;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00711;gene_id=Cattle_Y_G00527;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884349.1
haplotype2-0000357	CAT	exon	31047093	31047243	.	+	.	ID=Cattle_Y_E00910;Parent=Cattle_Y_T00711;Dbxref=GeneID:132344705,GenBank:XM_059884349.1;gbkey=mRNA;gene=LOC132344705;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00711;gene_id=Cattle_Y_G00527;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884349.1-1
haplotype2-0000357	CAT	exon	31056313	31058112	.	+	.	ID=Cattle_Y_E00911;Parent=Cattle_Y_T00711;Dbxref=GeneID:132344705,GenBank:XM_059884349.1;gbkey=mRNA;gene=LOC132344705;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00711;gene_id=Cattle_Y_G00527;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884349.1-2
haplotype2-0000357	CAT	CDS	31056384	31058112	.	+	0	ID=Cattle_Y_C00734;Parent=Cattle_Y_T00711;gene_id=Cattle_Y_G00527;transcript_id=Cattle_Y_T00711;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	31077589	31088141	.	+	.	ID=Cattle_Y_G00528;Dbxref=GeneID:132344542;Name=LOC132344542;description=uncharacterized LOC132344542;gbkey=Gene;gene=LOC132344542;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00528;source_id=gene-LOC132344542
haplotype2-0000357	CAT	exon	31077589	31077981	.	+	.	ID=Cattle_Y_T00712;Parent=Cattle_Y_G00528;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00528;transcript_id=Cattle_Y_T00712;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542
haplotype2-0000357	CAT	exon	31085321	31085459	.	+	.	ID=Cattle_Y_T00713;Parent=Cattle_Y_G00528;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00528;transcript_id=Cattle_Y_T00713;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542-2
haplotype2-0000357	CAT	exon	31086168	31086283	.	+	.	ID=Cattle_Y_T00714;Parent=Cattle_Y_G00528;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00528;transcript_id=Cattle_Y_T00714;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542-3
haplotype2-0000357	CAT	exon	31088002	31088141	.	+	.	ID=Cattle_Y_T00715;Parent=Cattle_Y_G00528;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00528;transcript_id=Cattle_Y_T00715;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542-4
haplotype2-0000357	CAT	gene	31212633	31214795	.	+	.	ID=Cattle_Y_G00529;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00529;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	31212633	31212705	.	+	.	ID=Cattle_Y_T00716;Parent=Cattle_Y_G00529;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00529;transcript_id=Cattle_Y_T00716;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	exon	31212788	31213182	.	+	.	ID=Cattle_Y_T00717;Parent=Cattle_Y_G00529;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00529;transcript_id=Cattle_Y_T00717;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	31213988	31214065	.	+	.	ID=Cattle_Y_T00718;Parent=Cattle_Y_G00529;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00529;transcript_id=Cattle_Y_T00718;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	31214249	31214360	.	+	.	ID=Cattle_Y_T00719;Parent=Cattle_Y_G00529;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00529;transcript_id=Cattle_Y_T00719;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	31214456	31214601	.	+	.	ID=Cattle_Y_T00720;Parent=Cattle_Y_G00529;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00529;transcript_id=Cattle_Y_T00720;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	31214718	31214795	.	+	.	ID=Cattle_Y_T00721;Parent=Cattle_Y_G00529;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00529;transcript_id=Cattle_Y_T00721;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	gene	31268578	31299589	.	+	.	ID=Cattle_Y_G00530;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00530;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	31268578	31299589	.	+	.	ID=Cattle_Y_T00722;Parent=Cattle_Y_G00530;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00722;gene_id=Cattle_Y_G00530;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	31268578	31268717	.	+	.	ID=Cattle_Y_E00912;Parent=Cattle_Y_T00722;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00722;gene_id=Cattle_Y_G00530;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	31297755	31299589	.	+	.	ID=Cattle_Y_E00913;Parent=Cattle_Y_T00722;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00722;gene_id=Cattle_Y_G00530;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	31297982	31299589	.	+	0	ID=Cattle_Y_C00735;Parent=Cattle_Y_T00722;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_26;gene_id=Cattle_Y_G00530;transcript_id=Cattle_Y_T00722;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	31308699	31310820	.	-	.	ID=Cattle_Y_G00531;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00531;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	31308699	31310820	.	-	.	ID=Cattle_Y_T00723;Parent=Cattle_Y_G00531;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00723;gene_id=Cattle_Y_G00531;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	31308699	31308776	.	-	.	ID=Cattle_Y_E00914;Parent=Cattle_Y_T00723;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00723;gene_id=Cattle_Y_G00531;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	31308893	31309038	.	-	.	ID=Cattle_Y_E00915;Parent=Cattle_Y_T00723;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00723;gene_id=Cattle_Y_G00531;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	31309134	31309247	.	-	.	ID=Cattle_Y_E00916;Parent=Cattle_Y_T00723;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00723;gene_id=Cattle_Y_G00531;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	31309431	31309506	.	-	.	ID=Cattle_Y_E00917;Parent=Cattle_Y_T00723;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00723;gene_id=Cattle_Y_G00531;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	31310280	31310674	.	-	.	ID=Cattle_Y_E00918;Parent=Cattle_Y_T00723;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00723;gene_id=Cattle_Y_G00531;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	31310757	31310820	.	-	.	ID=Cattle_Y_E00919;Parent=Cattle_Y_T00723;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00723;gene_id=Cattle_Y_G00531;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	31308699	31308776	.	-	0	ID=Cattle_Y_C00736;Parent=Cattle_Y_T00723;gene_id=Cattle_Y_G00531;transcript_id=Cattle_Y_T00723;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	31308893	31309038	.	-	2	ID=Cattle_Y_C00737;Parent=Cattle_Y_T00723;gene_id=Cattle_Y_G00531;transcript_id=Cattle_Y_T00723;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	31309134	31309247	.	-	2	ID=Cattle_Y_C00738;Parent=Cattle_Y_T00723;gene_id=Cattle_Y_G00531;transcript_id=Cattle_Y_T00723;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	31309431	31309506	.	-	0	ID=Cattle_Y_C00739;Parent=Cattle_Y_T00723;gene_id=Cattle_Y_G00531;transcript_id=Cattle_Y_T00723;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	31310280	31310674	.	-	2	ID=Cattle_Y_C00740;Parent=Cattle_Y_T00723;gene_id=Cattle_Y_G00531;transcript_id=Cattle_Y_T00723;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	31310757	31310820	.	-	0	ID=Cattle_Y_C00741;Parent=Cattle_Y_T00723;gene_id=Cattle_Y_G00531;transcript_id=Cattle_Y_T00723;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	31338286	31339023	.	+	.	ID=Cattle_Y_G00532;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00532;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	31338286	31339023	.	+	.	ID=Cattle_Y_T00724;Parent=Cattle_Y_G00532;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00532;transcript_id=Cattle_Y_T00724;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	31345115	31356566	.	+	.	ID=Cattle_Y_G00533;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00533;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	31345115	31356566	.	+	.	ID=Cattle_Y_T00725;Parent=Cattle_Y_G00533;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00725;gene_id=Cattle_Y_G00533;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	31345115	31345242	.	+	.	ID=Cattle_Y_E00920;Parent=Cattle_Y_T00725;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00725;gene_id=Cattle_Y_G00533;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	exon	31354759	31356566	.	+	.	ID=Cattle_Y_E00921;Parent=Cattle_Y_T00725;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00725;gene_id=Cattle_Y_G00533;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-2
haplotype2-0000357	CAT	CDS	31354830	31356461	.	+	0	ID=Cattle_Y_C00742;Parent=Cattle_Y_T00725;Dbxref=GeneID:768254,GenBank:NP_001071588.1,BGD:BT17804;Name=NP_001071588.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ZNF280BY;inference=similar to AA sequence (same species):RefSeq:NP_001071588.1;product=zinc finger protein 280B;protein_id=NP_001071588.1_26;gene_id=Cattle_Y_G00533;transcript_id=Cattle_Y_T00725;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	31360875	31361402	.	+	.	ID=Cattle_Y_G00534;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00534;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	31360875	31361402	.	+	.	ID=Cattle_Y_T00726;Parent=Cattle_Y_G00534;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00726;gene_id=Cattle_Y_G00534;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	31360875	31360998	.	+	.	ID=Cattle_Y_E00922;Parent=Cattle_Y_T00726;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00726;gene_id=Cattle_Y_G00534;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	31361071	31361402	.	+	.	ID=Cattle_Y_E00923;Parent=Cattle_Y_T00726;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00726;gene_id=Cattle_Y_G00534;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	31360875	31360998	.	+	0	ID=Cattle_Y_C00743;Parent=Cattle_Y_T00726;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_47;gene_id=Cattle_Y_G00534;transcript_id=Cattle_Y_T00726;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	31361071	31361402	.	+	2	ID=Cattle_Y_C00744;Parent=Cattle_Y_T00726;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_47;gene_id=Cattle_Y_G00534;transcript_id=Cattle_Y_T00726;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	31387121	31387695	.	-	.	ID=Cattle_Y_G00535;Dbxref=GeneID:132344660;Name=LOC132344660;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344660;gene_biotype=likely_pseudogene;partial=true;start_range=.,24728184;gene_id=Cattle_Y_G00535;source_id=gene-LOC132344660
haplotype2-0000357	CAT	mRNA	31387121	31387695	.	-	.	ID=Cattle_Y_T00727;Parent=Cattle_Y_G00535;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;Name=XM_059884305.1;gbkey=mRNA;gene=LOC132344660;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00727;gene_id=Cattle_Y_G00535;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884305.1
haplotype2-0000357	CAT	exon	31387121	31387506	.	-	.	ID=Cattle_Y_E00924;Parent=Cattle_Y_T00727;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00727;gene_id=Cattle_Y_G00535;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-2
haplotype2-0000357	CAT	exon	31387570	31387695	.	-	.	ID=Cattle_Y_E00925;Parent=Cattle_Y_T00727;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00727;gene_id=Cattle_Y_G00535;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884305.1-1
haplotype2-0000357	CAT	CDS	31387121	31387377	.	-	0	ID=Cattle_Y_C00745;Parent=Cattle_Y_T00727;Dbxref=GeneID:132344660,GenBank:XP_059740288.1;Name=XP_059740288.1;gbkey=CDS;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740288.1_9;start_range=.,24728184;gene_id=Cattle_Y_G00535;transcript_id=Cattle_Y_T00727;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	31435454	31438447	.	-	.	ID=Cattle_Y_G00536;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00536;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	31538450	31538982	.	-	.	ID=Cattle_Y_G00537;Dbxref=GeneID:132344692;Name=LOC132344692;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344692;gene_biotype=protein_coding;partial=true;start_range=.,36344638;gene_id=Cattle_Y_G00537;source_id=gene-LOC132344692
haplotype2-0000357	CAT	mRNA	31538450	31538982	.	-	.	ID=Cattle_Y_T00728;Parent=Cattle_Y_G00537;Dbxref=GeneID:132344692,GenBank:XM_059884334.1;Name=XM_059884334.1;gbkey=mRNA;gene=LOC132344692;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 60%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,36344638;transcript_id=Cattle_Y_T00728;gene_id=Cattle_Y_G00537;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884334.1
haplotype2-0000357	CAT	exon	31538450	31538982	.	-	.	ID=Cattle_Y_E00926;Parent=Cattle_Y_T00728;Dbxref=GeneID:132344692,GenBank:XM_059884334.1;gbkey=mRNA;gene=LOC132344692;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,36344638;transcript_id=Cattle_Y_T00728;gene_id=Cattle_Y_G00537;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884334.1-1
haplotype2-0000357	CAT	CDS	31538450	31538956	.	-	0	ID=Cattle_Y_C00746;Parent=Cattle_Y_T00728;Dbxref=GeneID:132344692,GenBank:XP_059740317.1;Name=XP_059740317.1;gbkey=CDS;gene=LOC132344692;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740317.1;start_range=.,36344638;gene_id=Cattle_Y_G00537;transcript_id=Cattle_Y_T00728;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	31623002	31623726	.	-	.	ID=Cattle_Y_G00538;Dbxref=GeneID:100337481;Name=LOC100337481;description=ubiquitin conjugating enzyme E2 D3 pseudogene;gbkey=Gene;gene=LOC100337481;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00538;source_id=gene-LOC100337481
haplotype2-0000357	CAT	gene	31723436	31726421	.	+	.	ID=Cattle_Y_G00539;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00539;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	31822620	31853674	.	+	.	ID=Cattle_Y_G00540;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00540;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	31822620	31853674	.	+	.	ID=Cattle_Y_T00729;Parent=Cattle_Y_G00540;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00729;gene_id=Cattle_Y_G00540;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	31822620	31822759	.	+	.	ID=Cattle_Y_E00927;Parent=Cattle_Y_T00729;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00729;gene_id=Cattle_Y_G00540;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	31851848	31853674	.	+	.	ID=Cattle_Y_E00928;Parent=Cattle_Y_T00729;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00729;gene_id=Cattle_Y_G00540;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	31852075	31853674	.	+	0	ID=Cattle_Y_C00747;Parent=Cattle_Y_T00729;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_25;gene_id=Cattle_Y_G00540;transcript_id=Cattle_Y_T00729;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	31862771	31864892	.	-	.	ID=Cattle_Y_G00541;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00541;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	31862771	31864892	.	-	.	ID=Cattle_Y_T00730;Parent=Cattle_Y_G00541;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00730;gene_id=Cattle_Y_G00541;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	31862771	31862848	.	-	.	ID=Cattle_Y_E00929;Parent=Cattle_Y_T00730;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00730;gene_id=Cattle_Y_G00541;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	31862965	31863110	.	-	.	ID=Cattle_Y_E00930;Parent=Cattle_Y_T00730;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00730;gene_id=Cattle_Y_G00541;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	31863206	31863319	.	-	.	ID=Cattle_Y_E00931;Parent=Cattle_Y_T00730;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00730;gene_id=Cattle_Y_G00541;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	31863503	31863578	.	-	.	ID=Cattle_Y_E00932;Parent=Cattle_Y_T00730;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00730;gene_id=Cattle_Y_G00541;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	31864352	31864746	.	-	.	ID=Cattle_Y_E00933;Parent=Cattle_Y_T00730;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00730;gene_id=Cattle_Y_G00541;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	31864829	31864892	.	-	.	ID=Cattle_Y_E00934;Parent=Cattle_Y_T00730;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00730;gene_id=Cattle_Y_G00541;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	31862771	31862848	.	-	0	ID=Cattle_Y_C00748;Parent=Cattle_Y_T00730;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_15;gene_id=Cattle_Y_G00541;transcript_id=Cattle_Y_T00730;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	31862965	31863110	.	-	2	ID=Cattle_Y_C00749;Parent=Cattle_Y_T00730;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_15;gene_id=Cattle_Y_G00541;transcript_id=Cattle_Y_T00730;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	31863206	31863319	.	-	2	ID=Cattle_Y_C00750;Parent=Cattle_Y_T00730;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_15;gene_id=Cattle_Y_G00541;transcript_id=Cattle_Y_T00730;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	31863503	31863578	.	-	0	ID=Cattle_Y_C00751;Parent=Cattle_Y_T00730;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_15;gene_id=Cattle_Y_G00541;transcript_id=Cattle_Y_T00730;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	31864352	31864624	.	-	0	ID=Cattle_Y_C00752;Parent=Cattle_Y_T00730;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_15;gene_id=Cattle_Y_G00541;transcript_id=Cattle_Y_T00730;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	31892819	31893556	.	+	.	ID=Cattle_Y_G00542;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00542;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	31892819	31893556	.	+	.	ID=Cattle_Y_T00731;Parent=Cattle_Y_G00542;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00542;transcript_id=Cattle_Y_T00731;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	31899645	31910705	.	+	.	ID=Cattle_Y_G00543;Dbxref=GeneID:132344688;Name=LOC132344688;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344688;gene_biotype=protein_coding;gene_id=Cattle_Y_G00543;source_id=gene-LOC132344688
haplotype2-0000357	CAT	mRNA	31899645	31910705	.	+	.	ID=Cattle_Y_T00732;Parent=Cattle_Y_G00543;Dbxref=GeneID:132344688,GenBank:XM_059884329.1;Name=XM_059884329.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344688;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00732;gene_id=Cattle_Y_G00543;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884329.1
haplotype2-0000357	CAT	exon	31899645	31899757	.	+	.	ID=Cattle_Y_E00935;Parent=Cattle_Y_T00732;Dbxref=GeneID:132344688,GenBank:XM_059884329.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344688;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00732;gene_id=Cattle_Y_G00543;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884329.1-1
haplotype2-0000357	CAT	exon	31908898	31910705	.	+	.	ID=Cattle_Y_E00936;Parent=Cattle_Y_T00732;Dbxref=GeneID:132344688,GenBank:XM_059884329.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344688;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00732;gene_id=Cattle_Y_G00543;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884329.1-2
haplotype2-0000357	CAT	CDS	31908969	31910600	.	+	0	ID=Cattle_Y_C00753;Parent=Cattle_Y_T00732;gene_id=Cattle_Y_G00543;transcript_id=Cattle_Y_T00732;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	31915000	31915527	.	+	.	ID=Cattle_Y_G00544;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00544;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	31915000	31915527	.	+	.	ID=Cattle_Y_T00733;Parent=Cattle_Y_G00544;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00733;gene_id=Cattle_Y_G00544;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	31915000	31915123	.	+	.	ID=Cattle_Y_E00937;Parent=Cattle_Y_T00733;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00733;gene_id=Cattle_Y_G00544;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	31915196	31915527	.	+	.	ID=Cattle_Y_E00938;Parent=Cattle_Y_T00733;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00733;gene_id=Cattle_Y_G00544;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	31915000	31915123	.	+	0	ID=Cattle_Y_C00754;Parent=Cattle_Y_T00733;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_27;gene_id=Cattle_Y_G00544;transcript_id=Cattle_Y_T00733;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	31915196	31915527	.	+	2	ID=Cattle_Y_C00755;Parent=Cattle_Y_T00733;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_27;gene_id=Cattle_Y_G00544;transcript_id=Cattle_Y_T00733;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	31941297	31941838	.	-	.	ID=Cattle_Y_G00545;Dbxref=GeneID:132344657;Name=LOC132344657;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344657;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00545;source_id=gene-LOC132344657
haplotype2-0000357	CAT	mRNA	31941297	31941838	.	-	.	ID=Cattle_Y_T00734;Parent=Cattle_Y_G00545;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;Name=XM_059884302.1;gbkey=mRNA;gene=LOC132344657;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00734;gene_id=Cattle_Y_G00545;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884302.1
haplotype2-0000357	CAT	exon	31941297	31941649	.	-	.	ID=Cattle_Y_E00939;Parent=Cattle_Y_T00734;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00734;gene_id=Cattle_Y_G00545;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-2
haplotype2-0000357	CAT	exon	31941713	31941838	.	-	.	ID=Cattle_Y_E00940;Parent=Cattle_Y_T00734;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00734;gene_id=Cattle_Y_G00545;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-1
haplotype2-0000357	CAT	CDS	31941297	31941520	.	-	0	ID=Cattle_Y_C00756;Parent=Cattle_Y_T00734;Dbxref=GeneID:132344657,GenBank:XP_059740285.1;Name=XP_059740285.1;gbkey=CDS;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740285.1_21;gene_id=Cattle_Y_G00545;transcript_id=Cattle_Y_T00734;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	32025030	32026497	.	+	.	ID=Cattle_Y_G00546;Dbxref=GeneID:132344674;Name=LOC132344674;description=heat shock transcription factor%2C Y-linked-like;end_range=28451721,.;gbkey=Gene;gene=LOC132344674;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00546;source_id=gene-LOC132344674
haplotype2-0000357	CAT	mRNA	32025030	32026497	.	+	.	ID=Cattle_Y_T00735;Parent=Cattle_Y_G00546;Dbxref=GeneID:132344674,GenBank:XM_059884314.1;Name=XM_059884314.1;end_range=28451721,.;gbkey=mRNA;gene=LOC132344674;model_evidence=Supporting evidence includes similarity to: 4 Proteins%2C and 21%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00735;gene_id=Cattle_Y_G00546;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884314.1
haplotype2-0000357	CAT	exon	32025030	32025539	.	+	.	ID=Cattle_Y_E00941;Parent=Cattle_Y_T00735;Dbxref=GeneID:132344674,GenBank:XM_059884314.1;gbkey=mRNA;gene=LOC132344674;partial=true;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00735;gene_id=Cattle_Y_G00546;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884314.1-1
haplotype2-0000357	CAT	exon	32025970	32026497	.	+	.	ID=Cattle_Y_E00942;Parent=Cattle_Y_T00735;Dbxref=GeneID:132344674,GenBank:XM_059884314.1;end_range=28451721,.;gbkey=mRNA;gene=LOC132344674;partial=true;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00735;gene_id=Cattle_Y_G00546;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884314.1-2
haplotype2-0000357	CAT	CDS	32025030	32025539	.	+	0	ID=Cattle_Y_C00757;Parent=Cattle_Y_T00735;gene_id=Cattle_Y_G00546;transcript_id=Cattle_Y_T00735;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	32025970	32026497	.	+	0	ID=Cattle_Y_C00758;Parent=Cattle_Y_T00735;gene_id=Cattle_Y_G00546;transcript_id=Cattle_Y_T00735;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	32116552	32118700	.	+	.	ID=Cattle_Y_G00547;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00547;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	32116552	32116624	.	+	.	ID=Cattle_Y_T00736;Parent=Cattle_Y_G00547;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00547;transcript_id=Cattle_Y_T00736;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	exon	32116707	32117101	.	+	.	ID=Cattle_Y_T00737;Parent=Cattle_Y_G00547;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00547;transcript_id=Cattle_Y_T00737;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	32117893	32117970	.	+	.	ID=Cattle_Y_T00738;Parent=Cattle_Y_G00547;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00547;transcript_id=Cattle_Y_T00738;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	32118154	32118265	.	+	.	ID=Cattle_Y_T00739;Parent=Cattle_Y_G00547;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00547;transcript_id=Cattle_Y_T00739;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	32118361	32118506	.	+	.	ID=Cattle_Y_T00740;Parent=Cattle_Y_G00547;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00547;transcript_id=Cattle_Y_T00740;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	32118623	32118700	.	+	.	ID=Cattle_Y_T00741;Parent=Cattle_Y_G00547;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00547;transcript_id=Cattle_Y_T00741;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	gene	32240062	32242210	.	-	.	ID=Cattle_Y_G00548;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00548;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	32240062	32240139	.	-	.	ID=Cattle_Y_T00742;Parent=Cattle_Y_G00548;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00548;transcript_id=Cattle_Y_T00742;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	exon	32240256	32240401	.	-	.	ID=Cattle_Y_T00743;Parent=Cattle_Y_G00548;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00548;transcript_id=Cattle_Y_T00743;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	32240497	32240608	.	-	.	ID=Cattle_Y_T00744;Parent=Cattle_Y_G00548;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00548;transcript_id=Cattle_Y_T00744;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	32240792	32240869	.	-	.	ID=Cattle_Y_T00745;Parent=Cattle_Y_G00548;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00548;transcript_id=Cattle_Y_T00745;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	32241661	32242055	.	-	.	ID=Cattle_Y_T00746;Parent=Cattle_Y_G00548;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00548;transcript_id=Cattle_Y_T00746;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	32242138	32242210	.	-	.	ID=Cattle_Y_T00747;Parent=Cattle_Y_G00548;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00548;transcript_id=Cattle_Y_T00747;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	gene	32333737	32334459	.	-	.	ID=Cattle_Y_G00549;Dbxref=GeneID:132344685;Name=LOC132344685;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344685;gene_biotype=protein_coding;partial=true;start_range=.,33040068;gene_id=Cattle_Y_G00549;source_id=gene-LOC132344685
haplotype2-0000357	CAT	mRNA	32333737	32334459	.	-	.	ID=Cattle_Y_T00748;Parent=Cattle_Y_G00549;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;Name=XM_059884326.1;gbkey=mRNA;gene=LOC132344685;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C and 42%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00748;gene_id=Cattle_Y_G00549;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884326.1
haplotype2-0000357	CAT	exon	32333737	32334459	.	-	.	ID=Cattle_Y_E00943;Parent=Cattle_Y_T00748;Dbxref=GeneID:132344685,GenBank:XM_059884326.1;gbkey=mRNA;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;start_range=.,33040068;transcript_id=Cattle_Y_T00748;gene_id=Cattle_Y_G00549;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884326.1-1
haplotype2-0000357	CAT	CDS	32333737	32334339	.	-	0	ID=Cattle_Y_C00759;Parent=Cattle_Y_T00748;Dbxref=GeneID:132344685,GenBank:XP_059740309.1;Name=XP_059740309.1;gbkey=CDS;gene=LOC132344685;partial=true;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740309.1_4;start_range=.,33040068;gene_id=Cattle_Y_G00549;transcript_id=Cattle_Y_T00748;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	32425806	32427656	.	+	.	ID=Cattle_Y_G00550;Dbxref=BGD:BT13513,GeneID:767933;Name=HSFY2;description=heat shock transcription factor%2C Y-linked 2;gbkey=Gene;gene=HSFY2;gene_biotype=protein_coding;gene_id=Cattle_Y_G00550;source_id=gene-HSFY2
haplotype2-0000357	CAT	mRNA	32425806	32427656	.	+	.	ID=Cattle_Y_T00749;Parent=Cattle_Y_G00550;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;Name=NM_001077006.1;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor%2C Y-linked 2;transcript_id=Cattle_Y_T00749;gene_id=Cattle_Y_G00550;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001077006.1
haplotype2-0000357	CAT	exon	32425806	32426412	.	+	.	ID=Cattle_Y_E00944;Parent=Cattle_Y_T00749;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;transcript_id=Cattle_Y_T00749;gene_id=Cattle_Y_G00550;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001077006.1-1
haplotype2-0000357	CAT	exon	32426843	32427656	.	+	.	ID=Cattle_Y_E00945;Parent=Cattle_Y_T00749;Dbxref=GeneID:767933,GenBank:NM_001077006.1,BGD:BT13513;gbkey=mRNA;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;transcript_id=Cattle_Y_T00749;gene_id=Cattle_Y_G00550;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001077006.1-2
haplotype2-0000357	CAT	CDS	32425903	32426412	.	+	0	ID=Cattle_Y_C00760;Parent=Cattle_Y_T00749;Dbxref=GeneID:767933,GenBank:NP_001070474.1,BGD:BT13513;Name=NP_001070474.1;gbkey=CDS;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;protein_id=NP_001070474.1_2;gene_id=Cattle_Y_G00550;transcript_id=Cattle_Y_T00749;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	32426843	32427586	.	+	0	ID=Cattle_Y_C00761;Parent=Cattle_Y_T00749;Dbxref=GeneID:767933,GenBank:NP_001070474.1,BGD:BT13513;Name=NP_001070474.1;gbkey=CDS;gene=HSFY2;product=heat shock transcription factor, Y-linked 2;protein_id=NP_001070474.1_2;gene_id=Cattle_Y_G00550;transcript_id=Cattle_Y_T00749;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	32517802	32520799	.	+	.	ID=Cattle_Y_G00551;Dbxref=GeneID:497225;Name=TSPY-M2;description=TSPY-M2 pseudogene;gbkey=Gene;gene=TSPY-M2;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00551;source_id=gene-TSPY-M2
haplotype2-0000357	CAT	gene	32617118	32648148	.	+	.	ID=Cattle_Y_G00552;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00552;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	32617118	32648148	.	+	.	ID=Cattle_Y_T00750;Parent=Cattle_Y_G00552;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00750;gene_id=Cattle_Y_G00552;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	32617118	32617257	.	+	.	ID=Cattle_Y_E00946;Parent=Cattle_Y_T00750;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00750;gene_id=Cattle_Y_G00552;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	32646323	32648148	.	+	.	ID=Cattle_Y_E00947;Parent=Cattle_Y_T00750;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00750;gene_id=Cattle_Y_G00552;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	32646550	32648148	.	+	0	ID=Cattle_Y_C00762;Parent=Cattle_Y_T00750;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_10;gene_id=Cattle_Y_G00552;transcript_id=Cattle_Y_T00750;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	32657245	32659366	.	-	.	ID=Cattle_Y_G00553;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00553;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	32657245	32659366	.	-	.	ID=Cattle_Y_T00751;Parent=Cattle_Y_G00553;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00751;gene_id=Cattle_Y_G00553;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	32657245	32657322	.	-	.	ID=Cattle_Y_E00948;Parent=Cattle_Y_T00751;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00751;gene_id=Cattle_Y_G00553;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	32657439	32657584	.	-	.	ID=Cattle_Y_E00949;Parent=Cattle_Y_T00751;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00751;gene_id=Cattle_Y_G00553;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	32657680	32657793	.	-	.	ID=Cattle_Y_E00950;Parent=Cattle_Y_T00751;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00751;gene_id=Cattle_Y_G00553;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	32657977	32658052	.	-	.	ID=Cattle_Y_E00951;Parent=Cattle_Y_T00751;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00751;gene_id=Cattle_Y_G00553;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	32658826	32659220	.	-	.	ID=Cattle_Y_E00952;Parent=Cattle_Y_T00751;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00751;gene_id=Cattle_Y_G00553;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	32659303	32659366	.	-	.	ID=Cattle_Y_E00953;Parent=Cattle_Y_T00751;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00751;gene_id=Cattle_Y_G00553;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	32657245	32657322	.	-	0	ID=Cattle_Y_C00763;Parent=Cattle_Y_T00751;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_24;gene_id=Cattle_Y_G00553;transcript_id=Cattle_Y_T00751;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	32657439	32657584	.	-	2	ID=Cattle_Y_C00764;Parent=Cattle_Y_T00751;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_24;gene_id=Cattle_Y_G00553;transcript_id=Cattle_Y_T00751;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	32657680	32657793	.	-	2	ID=Cattle_Y_C00765;Parent=Cattle_Y_T00751;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_24;gene_id=Cattle_Y_G00553;transcript_id=Cattle_Y_T00751;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	32657977	32658052	.	-	0	ID=Cattle_Y_C00766;Parent=Cattle_Y_T00751;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_24;gene_id=Cattle_Y_G00553;transcript_id=Cattle_Y_T00751;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	32658826	32659098	.	-	0	ID=Cattle_Y_C00767;Parent=Cattle_Y_T00751;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_24;gene_id=Cattle_Y_G00553;transcript_id=Cattle_Y_T00751;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	32687288	32688025	.	+	.	ID=Cattle_Y_G00554;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00554;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	32687288	32688025	.	+	.	ID=Cattle_Y_T00752;Parent=Cattle_Y_G00554;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00554;transcript_id=Cattle_Y_T00752;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	32694111	32705161	.	+	.	ID=Cattle_Y_G00555;Dbxref=GeneID:132344709;Name=LOC132344709;description=uncharacterized LOC132344709;gbkey=Gene;gene=LOC132344709;gene_biotype=lncRNA;gene_id=Cattle_Y_G00555;source_id=gene-LOC132344709
haplotype2-0000357	CAT	lnc_RNA	32694111	32705161	.	+	.	ID=Cattle_Y_T00753;Parent=Cattle_Y_G00555;Dbxref=GeneID:132344709,GenBank:XR_009493662.1;Name=XR_009493662.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=ncRNA;gene=LOC132344709;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T00753;gene_id=Cattle_Y_G00555;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=rna-XR_009493662.1
haplotype2-0000357	CAT	exon	32694111	32694219	.	+	.	ID=Cattle_Y_E00954;Parent=Cattle_Y_T00753;Dbxref=GeneID:132344709,GenBank:XR_009493662.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=ncRNA;gene=LOC132344709;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T00753;gene_id=Cattle_Y_G00555;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493662.1-1
haplotype2-0000357	CAT	exon	32703354	32705161	.	+	.	ID=Cattle_Y_E00955;Parent=Cattle_Y_T00753;Dbxref=GeneID:132344709,GenBank:XR_009493662.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=ncRNA;gene=LOC132344709;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T00753;gene_id=Cattle_Y_G00555;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493662.1-2
haplotype2-0000357	CAT	gene	32709461	32709988	.	+	.	ID=Cattle_Y_G00556;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00556;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	32709461	32709988	.	+	.	ID=Cattle_Y_T00754;Parent=Cattle_Y_G00556;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00754;gene_id=Cattle_Y_G00556;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	32709461	32709584	.	+	.	ID=Cattle_Y_E00956;Parent=Cattle_Y_T00754;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00754;gene_id=Cattle_Y_G00556;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	32709657	32709988	.	+	.	ID=Cattle_Y_E00957;Parent=Cattle_Y_T00754;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00754;gene_id=Cattle_Y_G00556;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	32709461	32709584	.	+	0	ID=Cattle_Y_C00768;Parent=Cattle_Y_T00754;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_21;gene_id=Cattle_Y_G00556;transcript_id=Cattle_Y_T00754;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	32709657	32709988	.	+	2	ID=Cattle_Y_C00769;Parent=Cattle_Y_T00754;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_21;gene_id=Cattle_Y_G00556;transcript_id=Cattle_Y_T00754;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	32735752	32736293	.	-	.	ID=Cattle_Y_G00557;Dbxref=GeneID:132344657;Name=LOC132344657;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344657;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00557;source_id=gene-LOC132344657
haplotype2-0000357	CAT	mRNA	32735752	32736293	.	-	.	ID=Cattle_Y_T00755;Parent=Cattle_Y_G00557;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;Name=XM_059884302.1;gbkey=mRNA;gene=LOC132344657;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00755;gene_id=Cattle_Y_G00557;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884302.1
haplotype2-0000357	CAT	exon	32735752	32736104	.	-	.	ID=Cattle_Y_E00958;Parent=Cattle_Y_T00755;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00755;gene_id=Cattle_Y_G00557;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-2
haplotype2-0000357	CAT	exon	32736168	32736293	.	-	.	ID=Cattle_Y_E00959;Parent=Cattle_Y_T00755;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00755;gene_id=Cattle_Y_G00557;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-1
haplotype2-0000357	CAT	CDS	32735752	32735975	.	-	0	ID=Cattle_Y_C00770;Parent=Cattle_Y_T00755;Dbxref=GeneID:132344657,GenBank:XP_059740285.1;Name=XP_059740285.1;gbkey=CDS;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740285.1_18;gene_id=Cattle_Y_G00557;transcript_id=Cattle_Y_T00755;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	32811105	32812911	.	+	.	ID=Cattle_Y_G00558;Dbxref=GeneID:132344667;Name=LOC132344667;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344667;gene_biotype=protein_coding;gene_id=Cattle_Y_G00558;source_id=gene-LOC132344667
haplotype2-0000357	CAT	mRNA	32811105	32812911	.	+	.	ID=Cattle_Y_T00756;Parent=Cattle_Y_G00558;Dbxref=GeneID:132344667,GenBank:XM_059884309.1;Name=XM_059884309.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344667;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00756;gene_id=Cattle_Y_G00558;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884309.1
haplotype2-0000357	CAT	exon	32811105	32811667	.	+	.	ID=Cattle_Y_E00960;Parent=Cattle_Y_T00756;Dbxref=GeneID:132344667,GenBank:XM_059884309.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344667;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00756;gene_id=Cattle_Y_G00558;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884309.1-1
haplotype2-0000357	CAT	exon	32812098	32812911	.	+	.	ID=Cattle_Y_E00961;Parent=Cattle_Y_T00756;Dbxref=GeneID:132344667,GenBank:XM_059884309.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344667;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00756;gene_id=Cattle_Y_G00558;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884309.1-2
haplotype2-0000357	CAT	CDS	32811158	32811667	.	+	0	ID=Cattle_Y_C00771;Parent=Cattle_Y_T00756;gene_id=Cattle_Y_G00558;transcript_id=Cattle_Y_T00756;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	32812098	32812841	.	+	0	ID=Cattle_Y_C00772;Parent=Cattle_Y_T00756;gene_id=Cattle_Y_G00558;transcript_id=Cattle_Y_T00756;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	32903545	32905716	.	+	.	ID=Cattle_Y_G00559;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00559;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	32903545	32903617	.	+	.	ID=Cattle_Y_T00757;Parent=Cattle_Y_G00559;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00559;transcript_id=Cattle_Y_T00757;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	exon	32903700	32904094	.	+	.	ID=Cattle_Y_T00758;Parent=Cattle_Y_G00559;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00559;transcript_id=Cattle_Y_T00758;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	32904909	32904986	.	+	.	ID=Cattle_Y_T00759;Parent=Cattle_Y_G00559;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00559;transcript_id=Cattle_Y_T00759;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	32905170	32905281	.	+	.	ID=Cattle_Y_T00760;Parent=Cattle_Y_G00559;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00559;transcript_id=Cattle_Y_T00760;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	32905377	32905522	.	+	.	ID=Cattle_Y_T00761;Parent=Cattle_Y_G00559;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00559;transcript_id=Cattle_Y_T00761;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	32905639	32905716	.	+	.	ID=Cattle_Y_T00762;Parent=Cattle_Y_G00559;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00559;transcript_id=Cattle_Y_T00762;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	gene	32978963	32981134	.	-	.	ID=Cattle_Y_G00560;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00560;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	32978963	32979040	.	-	.	ID=Cattle_Y_T00763;Parent=Cattle_Y_G00560;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00560;transcript_id=Cattle_Y_T00763;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	exon	32979157	32979302	.	-	.	ID=Cattle_Y_T00764;Parent=Cattle_Y_G00560;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00560;transcript_id=Cattle_Y_T00764;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	32979398	32979509	.	-	.	ID=Cattle_Y_T00765;Parent=Cattle_Y_G00560;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00560;transcript_id=Cattle_Y_T00765;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	32979693	32979770	.	-	.	ID=Cattle_Y_T00766;Parent=Cattle_Y_G00560;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00560;transcript_id=Cattle_Y_T00766;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	32980585	32980979	.	-	.	ID=Cattle_Y_T00767;Parent=Cattle_Y_G00560;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00560;transcript_id=Cattle_Y_T00767;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	32981062	32981134	.	-	.	ID=Cattle_Y_T00768;Parent=Cattle_Y_G00560;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00560;transcript_id=Cattle_Y_T00768;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	gene	33070974	33072733	.	-	.	ID=Cattle_Y_G00561;Dbxref=GeneID:132344669;Name=LOC132344669;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344669;gene_biotype=protein_coding;gene_id=Cattle_Y_G00561;source_id=gene-LOC132344669
haplotype2-0000357	CAT	mRNA	33070974	33072733	.	-	.	ID=Cattle_Y_T00769;Parent=Cattle_Y_G00561;Dbxref=GeneID:132344669,GenBank:XM_059884310.1;Name=XM_059884310.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344669;model_evidence=Supporting evidence includes similarity to: 4 Proteins%2C and 97%25 coverage of the annotated genomic feature by RNAseq alignments;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00769;gene_id=Cattle_Y_G00561;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884310.1
haplotype2-0000357	CAT	exon	33070974	33071791	.	-	.	ID=Cattle_Y_E00962;Parent=Cattle_Y_T00769;Dbxref=GeneID:132344669,GenBank:XM_059884310.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344669;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00769;gene_id=Cattle_Y_G00561;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884310.1-2
haplotype2-0000357	CAT	exon	33072222	33072733	.	-	.	ID=Cattle_Y_E00963;Parent=Cattle_Y_T00769;Dbxref=GeneID:132344669,GenBank:XM_059884310.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344669;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00769;gene_id=Cattle_Y_G00561;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884310.1-1
haplotype2-0000357	CAT	CDS	33071048	33071791	.	-	0	ID=Cattle_Y_C00773;Parent=Cattle_Y_T00769;Dbxref=GeneID:132344669,GenBank:XP_059740293.1;Name=XP_059740293.1;gbkey=CDS;gene=LOC132344669;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740293.1;gene_id=Cattle_Y_G00561;transcript_id=Cattle_Y_T00769;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	33072222	33072731	.	-	0	ID=Cattle_Y_C00774;Parent=Cattle_Y_T00769;Dbxref=GeneID:132344669,GenBank:XP_059740293.1;Name=XP_059740293.1;gbkey=CDS;gene=LOC132344669;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740293.1;gene_id=Cattle_Y_G00561;transcript_id=Cattle_Y_T00769;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	33244732	33246850	.	-	.	ID=Cattle_Y_G00562;Dbxref=GeneID:132344693;Name=LOC132344693;description=testis-specific Y-encoded protein 1-like;end_range=36675566,.;gbkey=Gene;gene=LOC132344693;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00562;source_id=gene-LOC132344693
haplotype2-0000357	CAT	mRNA	33244732	33246850	.	-	.	ID=Cattle_Y_T00770;Parent=Cattle_Y_G00562;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;Name=XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;model_evidence=Supporting evidence includes similarity to: 3 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00770;gene_id=Cattle_Y_G00562;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884335.1
haplotype2-0000357	CAT	exon	33244732	33244809	.	-	.	ID=Cattle_Y_E00964;Parent=Cattle_Y_T00770;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00770;gene_id=Cattle_Y_G00562;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-6
haplotype2-0000357	CAT	exon	33244926	33245071	.	-	.	ID=Cattle_Y_E00965;Parent=Cattle_Y_T00770;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00770;gene_id=Cattle_Y_G00562;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-5
haplotype2-0000357	CAT	exon	33245167	33245280	.	-	.	ID=Cattle_Y_E00966;Parent=Cattle_Y_T00770;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00770;gene_id=Cattle_Y_G00562;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-4
haplotype2-0000357	CAT	exon	33245464	33245539	.	-	.	ID=Cattle_Y_E00967;Parent=Cattle_Y_T00770;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00770;gene_id=Cattle_Y_G00562;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-3
haplotype2-0000357	CAT	exon	33246310	33246704	.	-	.	ID=Cattle_Y_E00968;Parent=Cattle_Y_T00770;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00770;gene_id=Cattle_Y_G00562;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-2
haplotype2-0000357	CAT	exon	33246787	33246850	.	-	.	ID=Cattle_Y_E00969;Parent=Cattle_Y_T00770;Dbxref=GeneID:132344693,GenBank:XM_059884335.1;end_range=36675566,.;gbkey=mRNA;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00770;gene_id=Cattle_Y_G00562;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884335.1-1
haplotype2-0000357	CAT	CDS	33244732	33244809	.	-	0	ID=Cattle_Y_C00775;Parent=Cattle_Y_T00770;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_38;gene_id=Cattle_Y_G00562;transcript_id=Cattle_Y_T00770;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	33244926	33245071	.	-	2	ID=Cattle_Y_C00776;Parent=Cattle_Y_T00770;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_38;gene_id=Cattle_Y_G00562;transcript_id=Cattle_Y_T00770;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	33245167	33245280	.	-	2	ID=Cattle_Y_C00777;Parent=Cattle_Y_T00770;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_38;gene_id=Cattle_Y_G00562;transcript_id=Cattle_Y_T00770;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	33245464	33245539	.	-	0	ID=Cattle_Y_C00778;Parent=Cattle_Y_T00770;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_38;gene_id=Cattle_Y_G00562;transcript_id=Cattle_Y_T00770;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	33246310	33246704	.	-	2	ID=Cattle_Y_C00779;Parent=Cattle_Y_T00770;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_38;gene_id=Cattle_Y_G00562;transcript_id=Cattle_Y_T00770;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	33246787	33246850	.	-	0	ID=Cattle_Y_C00780;Parent=Cattle_Y_T00770;Dbxref=GeneID:132344693,GenBank:XP_059740318.1;Name=XP_059740318.1;end_range=36675566,.;gbkey=CDS;gene=LOC132344693;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740318.1_38;gene_id=Cattle_Y_G00562;transcript_id=Cattle_Y_T00770;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	33284075	33295102	.	+	.	ID=Cattle_Y_G00563;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00563;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	33284075	33295102	.	+	.	ID=Cattle_Y_T00771;Parent=Cattle_Y_G00563;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00771;gene_id=Cattle_Y_G00563;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	33284075	33284202	.	+	.	ID=Cattle_Y_E00970;Parent=Cattle_Y_T00771;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00771;gene_id=Cattle_Y_G00563;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	exon	33293295	33295102	.	+	.	ID=Cattle_Y_E00971;Parent=Cattle_Y_T00771;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00771;gene_id=Cattle_Y_G00563;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-2
haplotype2-0000357	CAT	CDS	33293366	33294997	.	+	0	ID=Cattle_Y_C00781;Parent=Cattle_Y_T00771;gene_id=Cattle_Y_G00563;transcript_id=Cattle_Y_T00771;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	33299386	33299913	.	+	.	ID=Cattle_Y_G00564;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00564;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	33299386	33299913	.	+	.	ID=Cattle_Y_T00772;Parent=Cattle_Y_G00564;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00772;gene_id=Cattle_Y_G00564;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	33299386	33299509	.	+	.	ID=Cattle_Y_E00972;Parent=Cattle_Y_T00772;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00772;gene_id=Cattle_Y_G00564;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	exon	33299582	33299913	.	+	.	ID=Cattle_Y_E00973;Parent=Cattle_Y_T00772;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00772;gene_id=Cattle_Y_G00564;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	CDS	33299386	33299509	.	+	0	ID=Cattle_Y_C00782;Parent=Cattle_Y_T00772;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_14;gene_id=Cattle_Y_G00564;transcript_id=Cattle_Y_T00772;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	33299582	33299913	.	+	2	ID=Cattle_Y_C00783;Parent=Cattle_Y_T00772;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_14;gene_id=Cattle_Y_G00564;transcript_id=Cattle_Y_T00772;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	33325639	33326180	.	-	.	ID=Cattle_Y_G00565;Dbxref=GeneID:132344657;Name=LOC132344657;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344657;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00565;source_id=gene-LOC132344657
haplotype2-0000357	CAT	mRNA	33325639	33326180	.	-	.	ID=Cattle_Y_T00773;Parent=Cattle_Y_G00565;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;Name=XM_059884302.1;gbkey=mRNA;gene=LOC132344657;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00773;gene_id=Cattle_Y_G00565;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884302.1
haplotype2-0000357	CAT	exon	33325639	33325991	.	-	.	ID=Cattle_Y_E00974;Parent=Cattle_Y_T00773;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00773;gene_id=Cattle_Y_G00565;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-2
haplotype2-0000357	CAT	exon	33326055	33326180	.	-	.	ID=Cattle_Y_E00975;Parent=Cattle_Y_T00773;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00773;gene_id=Cattle_Y_G00565;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-1
haplotype2-0000357	CAT	CDS	33325639	33325862	.	-	0	ID=Cattle_Y_C00784;Parent=Cattle_Y_T00773;Dbxref=GeneID:132344657,GenBank:XP_059740285.1;Name=XP_059740285.1;gbkey=CDS;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740285.1_12;gene_id=Cattle_Y_G00565;transcript_id=Cattle_Y_T00773;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	33401879	33403685	.	+	.	ID=Cattle_Y_G00566;Dbxref=GeneID:132344667;Name=LOC132344667;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344667;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00566;source_id=gene-LOC132344667
haplotype2-0000357	CAT	mRNA	33401879	33403685	.	+	.	ID=Cattle_Y_T00774;Parent=Cattle_Y_G00566;Dbxref=GeneID:132344667,GenBank:XM_059884309.1;Name=XM_059884309.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344667;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00774;gene_id=Cattle_Y_G00566;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884309.1
haplotype2-0000357	CAT	exon	33401879	33402441	.	+	.	ID=Cattle_Y_E00976;Parent=Cattle_Y_T00774;Dbxref=GeneID:132344667,GenBank:XM_059884309.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344667;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00774;gene_id=Cattle_Y_G00566;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884309.1-1
haplotype2-0000357	CAT	exon	33402872	33403685	.	+	.	ID=Cattle_Y_E00977;Parent=Cattle_Y_T00774;Dbxref=GeneID:132344667,GenBank:XM_059884309.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344667;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00774;gene_id=Cattle_Y_G00566;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884309.1-2
haplotype2-0000357	CAT	CDS	33401932	33402441	.	+	0	ID=Cattle_Y_C00785;Parent=Cattle_Y_T00774;Dbxref=GeneID:132344667,GenBank:XP_059740292.1;Name=XP_059740292.1;gbkey=CDS;gene=LOC132344667;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740292.1_2;gene_id=Cattle_Y_G00566;transcript_id=Cattle_Y_T00774;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	CDS	33402872	33403615	.	+	0	ID=Cattle_Y_C00786;Parent=Cattle_Y_T00774;Dbxref=GeneID:132344667,GenBank:XP_059740292.1;Name=XP_059740292.1;gbkey=CDS;gene=LOC132344667;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740292.1_2;gene_id=Cattle_Y_G00566;transcript_id=Cattle_Y_T00774;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	33576055	33578213	.	-	.	ID=Cattle_Y_G00567;Dbxref=GeneID:132344668;Name=LOC132344668;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344668;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00567;source_id=gene-LOC132344668
haplotype2-0000357	CAT	exon	33576055	33576132	.	-	.	ID=Cattle_Y_T00775;Parent=Cattle_Y_G00567;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00567;transcript_id=Cattle_Y_T00775;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-6
haplotype2-0000357	CAT	exon	33576249	33576394	.	-	.	ID=Cattle_Y_T00776;Parent=Cattle_Y_G00567;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00567;transcript_id=Cattle_Y_T00776;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-5
haplotype2-0000357	CAT	exon	33576490	33576601	.	-	.	ID=Cattle_Y_T00777;Parent=Cattle_Y_G00567;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00567;transcript_id=Cattle_Y_T00777;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-4
haplotype2-0000357	CAT	exon	33576785	33576862	.	-	.	ID=Cattle_Y_T00778;Parent=Cattle_Y_G00567;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00567;transcript_id=Cattle_Y_T00778;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-3
haplotype2-0000357	CAT	exon	33577664	33578058	.	-	.	ID=Cattle_Y_T00779;Parent=Cattle_Y_G00567;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00567;transcript_id=Cattle_Y_T00779;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668-2
haplotype2-0000357	CAT	exon	33578141	33578213	.	-	.	ID=Cattle_Y_T00780;Parent=Cattle_Y_G00567;Dbxref=GeneID:132344668;gbkey=exon;gene=LOC132344668;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00567;transcript_id=Cattle_Y_T00780;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344668
haplotype2-0000357	CAT	gene	33668151	33669957	.	-	.	ID=Cattle_Y_G00568;Dbxref=GeneID:132344667;Name=LOC132344667;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344667;gene_biotype=protein_coding;gene_id=Cattle_Y_G00568;source_id=gene-LOC132344667
haplotype2-0000357	CAT	mRNA	33668151	33669957	.	-	.	ID=Cattle_Y_T00781;Parent=Cattle_Y_G00568;Dbxref=GeneID:132344667,GenBank:XM_059884309.1;Name=XM_059884309.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344667;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00781;gene_id=Cattle_Y_G00568;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884309.1
haplotype2-0000357	CAT	exon	33668151	33668964	.	-	.	ID=Cattle_Y_E00978;Parent=Cattle_Y_T00781;Dbxref=GeneID:132344667,GenBank:XM_059884309.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344667;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00781;gene_id=Cattle_Y_G00568;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884309.1-2
haplotype2-0000357	CAT	exon	33669395	33669957	.	-	.	ID=Cattle_Y_E00979;Parent=Cattle_Y_T00781;Dbxref=GeneID:132344667,GenBank:XM_059884309.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344667;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00781;gene_id=Cattle_Y_G00568;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884309.1-1
haplotype2-0000357	CAT	CDS	33668221	33668964	.	-	0	ID=Cattle_Y_C00787;Parent=Cattle_Y_T00781;Dbxref=GeneID:132344667,GenBank:XP_059740292.1;Name=XP_059740292.1;gbkey=CDS;gene=LOC132344667;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740292.1;gene_id=Cattle_Y_G00568;transcript_id=Cattle_Y_T00781;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	33669395	33669904	.	-	0	ID=Cattle_Y_C00788;Parent=Cattle_Y_T00781;Dbxref=GeneID:132344667,GenBank:XP_059740292.1;Name=XP_059740292.1;gbkey=CDS;gene=LOC132344667;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740292.1;gene_id=Cattle_Y_G00568;transcript_id=Cattle_Y_T00781;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	33745555	33746096	.	+	.	ID=Cattle_Y_G00569;Dbxref=GeneID:132344657;Name=LOC132344657;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344657;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00569;source_id=gene-LOC132344657
haplotype2-0000357	CAT	mRNA	33745555	33746096	.	+	.	ID=Cattle_Y_T00782;Parent=Cattle_Y_G00569;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;Name=XM_059884302.1;gbkey=mRNA;gene=LOC132344657;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00782;gene_id=Cattle_Y_G00569;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884302.1
haplotype2-0000357	CAT	exon	33745555	33745680	.	+	.	ID=Cattle_Y_E00980;Parent=Cattle_Y_T00782;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00782;gene_id=Cattle_Y_G00569;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-1
haplotype2-0000357	CAT	exon	33745744	33746096	.	+	.	ID=Cattle_Y_E00981;Parent=Cattle_Y_T00782;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00782;gene_id=Cattle_Y_G00569;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884302.1-2
haplotype2-0000357	CAT	CDS	33745873	33746096	.	+	0	ID=Cattle_Y_C00789;Parent=Cattle_Y_T00782;Dbxref=GeneID:132344657,GenBank:XP_059740285.1;Name=XP_059740285.1;gbkey=CDS;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740285.1_9;gene_id=Cattle_Y_G00569;transcript_id=Cattle_Y_T00782;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	33771833	33772360	.	-	.	ID=Cattle_Y_G00570;Dbxref=GeneID:132344718;Name=LOC132344718;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344718;gene_biotype=protein_coding;gene_id=Cattle_Y_G00570;source_id=gene-LOC132344718
haplotype2-0000357	CAT	mRNA	33771833	33772360	.	-	.	ID=Cattle_Y_T00783;Parent=Cattle_Y_G00570;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;Name=XM_059884363.1;gbkey=mRNA;gene=LOC132344718;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00783;gene_id=Cattle_Y_G00570;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884363.1
haplotype2-0000357	CAT	exon	33771833	33772164	.	-	.	ID=Cattle_Y_E00982;Parent=Cattle_Y_T00783;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00783;gene_id=Cattle_Y_G00570;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-2
haplotype2-0000357	CAT	exon	33772237	33772360	.	-	.	ID=Cattle_Y_E00983;Parent=Cattle_Y_T00783;Dbxref=GeneID:132344718,GenBank:XM_059884363.1;gbkey=mRNA;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00783;gene_id=Cattle_Y_G00570;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884363.1-1
haplotype2-0000357	CAT	CDS	33771833	33772164	.	-	2	ID=Cattle_Y_C00790;Parent=Cattle_Y_T00783;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_9;gene_id=Cattle_Y_G00570;transcript_id=Cattle_Y_T00783;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	33772237	33772360	.	-	0	ID=Cattle_Y_C00791;Parent=Cattle_Y_T00783;Dbxref=GeneID:132344718,GenBank:XP_059740346.1;Name=XP_059740346.1;gbkey=CDS;gene=LOC132344718;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740346.1_9;gene_id=Cattle_Y_G00570;transcript_id=Cattle_Y_T00783;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	33776683	33787713	.	-	.	ID=Cattle_Y_G00571;Dbxref=BGD:BT17804,GeneID:768254;Name=ZNF280BY;description=zinc finger protein 280B-like;gbkey=Gene;gene=ZNF280BY;gene_biotype=protein_coding;gene_id=Cattle_Y_G00571;source_id=gene-ZNF280BY
haplotype2-0000357	CAT	mRNA	33776683	33787713	.	-	.	ID=Cattle_Y_T00784;Parent=Cattle_Y_G00571;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Name=NM_001078120.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00784;gene_id=Cattle_Y_G00571;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001078120.2
haplotype2-0000357	CAT	exon	33776683	33778503	.	-	.	ID=Cattle_Y_E00984;Parent=Cattle_Y_T00784;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00784;gene_id=Cattle_Y_G00571;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-2
haplotype2-0000357	CAT	exon	33787586	33787713	.	-	.	ID=Cattle_Y_E00985;Parent=Cattle_Y_T00784;Dbxref=GeneID:768254,GenBank:NM_001078120.2,BGD:BT17804;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZNF280BY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001078120.2;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00784;gene_id=Cattle_Y_G00571;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001078120.2-1
haplotype2-0000357	CAT	CDS	33776683	33778432	.	-	0	ID=Cattle_Y_C00792;Parent=Cattle_Y_T00784;Dbxref=GeneID:768254,GenBank:NP_001071588.1,BGD:BT17804;Name=NP_001071588.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ZNF280BY;inference=similar to AA sequence (same species):RefSeq:NP_001071588.1;product=zinc finger protein 280B;protein_id=NP_001071588.1_25;gene_id=Cattle_Y_G00571;transcript_id=Cattle_Y_T00784;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	33793809	33794546	.	-	.	ID=Cattle_Y_G00572;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00572;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	33793809	33794546	.	-	.	ID=Cattle_Y_T00785;Parent=Cattle_Y_G00572;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00572;transcript_id=Cattle_Y_T00785;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	33825080	33827045	.	+	.	ID=Cattle_Y_G00573;Dbxref=GeneID:132344672;Name=LOC132344672;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344672;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00573;source_id=gene-LOC132344672
haplotype2-0000357	CAT	exon	33825080	33825462	.	+	.	ID=Cattle_Y_T00786;Parent=Cattle_Y_G00573;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00573;transcript_id=Cattle_Y_T00786;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-5
haplotype2-0000357	CAT	exon	33826238	33826313	.	+	.	ID=Cattle_Y_T00787;Parent=Cattle_Y_G00573;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00573;transcript_id=Cattle_Y_T00787;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-4
haplotype2-0000357	CAT	exon	33826497	33826610	.	+	.	ID=Cattle_Y_T00788;Parent=Cattle_Y_G00573;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00573;transcript_id=Cattle_Y_T00788;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-3
haplotype2-0000357	CAT	exon	33826706	33826851	.	+	.	ID=Cattle_Y_T00789;Parent=Cattle_Y_G00573;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00573;transcript_id=Cattle_Y_T00789;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672-2
haplotype2-0000357	CAT	exon	33826968	33827045	.	+	.	ID=Cattle_Y_T00790;Parent=Cattle_Y_G00573;Dbxref=GeneID:132344672;gbkey=exon;gene=LOC132344672;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 9%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00573;transcript_id=Cattle_Y_T00790;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344672
haplotype2-0000357	CAT	gene	33946444	33948303	.	-	.	ID=Cattle_Y_G00574;Dbxref=GeneID:132344666;Name=LOC132344666;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344666;gene_biotype=protein_coding;gene_id=Cattle_Y_G00574;source_id=gene-LOC132344666
haplotype2-0000357	CAT	mRNA	33946444	33948303	.	-	.	ID=Cattle_Y_T00791;Parent=Cattle_Y_G00574;Dbxref=GeneID:132344666,GenBank:XM_059884308.1;Name=XM_059884308.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;exception=unclassified transcription discrepancy;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344666;model_evidence=Supporting evidence includes similarity to: 4 Proteins%2C and 99%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00791;gene_id=Cattle_Y_G00574;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884308.1
haplotype2-0000357	CAT	exon	33946444	33947248	.	-	.	ID=Cattle_Y_E00986;Parent=Cattle_Y_T00791;Dbxref=GeneID:132344666,GenBank:XM_059884308.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;exception=unclassified transcription discrepancy;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344666;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00791;gene_id=Cattle_Y_G00574;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884308.1-3
haplotype2-0000357	CAT	exon	33947678	33948303	.	-	.	ID=Cattle_Y_E00987;Parent=Cattle_Y_T00791;Dbxref=GeneID:132344666,GenBank:XM_059884308.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;exception=unclassified transcription discrepancy;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344666;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00791;gene_id=Cattle_Y_G00574;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884308.1-1
haplotype2-0000357	CAT	CDS	33946563	33947248	1146	-	0	ID=Cattle_Y_C00793;Parent=Cattle_Y_T00791;gene_id=Cattle_Y_G00574;transcript_id=Cattle_Y_T00791;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	33947678	33948187	869	-	0	ID=Cattle_Y_C00794;Parent=Cattle_Y_T00791;gene_id=Cattle_Y_G00574;transcript_id=Cattle_Y_T00791;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	34024838	34026200	.	+	.	ID=Cattle_Y_G00575;Dbxref=GeneID:132344541;Name=LOC132344541;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344541;gene_biotype=protein_coding;gene_id=Cattle_Y_G00575;source_id=gene-LOC132344541
haplotype2-0000357	CAT	mRNA	34024838	34026200	.	+	.	ID=Cattle_Y_T00792;Parent=Cattle_Y_G00575;Dbxref=GeneID:132344541,GenBank:XM_059884229.1;Name=XM_059884229.1;gbkey=mRNA;gene=LOC132344541;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00792;gene_id=Cattle_Y_G00575;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884229.1
haplotype2-0000357	CAT	exon	34024838	34024951	.	+	.	ID=Cattle_Y_E00988;Parent=Cattle_Y_T00792;Dbxref=GeneID:132344541,GenBank:XM_059884229.1;gbkey=mRNA;gene=LOC132344541;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00792;gene_id=Cattle_Y_G00575;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884229.1-1
haplotype2-0000357	CAT	exon	34025027	34025423	.	+	.	ID=Cattle_Y_E00989;Parent=Cattle_Y_T00792;Dbxref=GeneID:132344541,GenBank:XM_059884229.1;gbkey=mRNA;gene=LOC132344541;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00792;gene_id=Cattle_Y_G00575;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884229.1-2
haplotype2-0000357	CAT	exon	34026172	34026200	.	+	.	ID=Cattle_Y_E00990;Parent=Cattle_Y_T00792;Dbxref=GeneID:132344541,GenBank:XM_059884229.1;gbkey=mRNA;gene=LOC132344541;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00792;gene_id=Cattle_Y_G00575;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884229.1-3
haplotype2-0000357	CAT	CDS	34024838	34024951	.	+	0	ID=Cattle_Y_C00795;Parent=Cattle_Y_T00792;Dbxref=GeneID:132344541,GenBank:XP_059740212.1;Name=XP_059740212.1;gbkey=CDS;gene=LOC132344541;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740212.1;gene_id=Cattle_Y_G00575;transcript_id=Cattle_Y_T00792;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34025027	34025423	.	+	0	ID=Cattle_Y_C00796;Parent=Cattle_Y_T00792;Dbxref=GeneID:132344541,GenBank:XP_059740212.1;Name=XP_059740212.1;gbkey=CDS;gene=LOC132344541;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740212.1;gene_id=Cattle_Y_G00575;transcript_id=Cattle_Y_T00792;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34026172	34026200	.	+	2	ID=Cattle_Y_C00797;Parent=Cattle_Y_T00792;Dbxref=GeneID:132344541,GenBank:XP_059740212.1;Name=XP_059740212.1;gbkey=CDS;gene=LOC132344541;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740212.1;gene_id=Cattle_Y_G00575;transcript_id=Cattle_Y_T00792;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	34050913	34051440	.	-	.	ID=Cattle_Y_G00576;Dbxref=GeneID:132344665;Name=LOC132344665;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344665;gene_biotype=protein_coding;gene_id=Cattle_Y_G00576;source_id=gene-LOC132344665
haplotype2-0000357	CAT	mRNA	34050913	34051440	.	-	.	ID=Cattle_Y_T00793;Parent=Cattle_Y_G00576;Dbxref=GeneID:132344665,GenBank:XM_059884307.1;Name=XM_059884307.1;gbkey=mRNA;gene=LOC132344665;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00793;gene_id=Cattle_Y_G00576;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884307.1
haplotype2-0000357	CAT	exon	34050913	34051244	.	-	.	ID=Cattle_Y_E00991;Parent=Cattle_Y_T00793;Dbxref=GeneID:132344665,GenBank:XM_059884307.1;gbkey=mRNA;gene=LOC132344665;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00793;gene_id=Cattle_Y_G00576;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884307.1-2
haplotype2-0000357	CAT	exon	34051317	34051440	.	-	.	ID=Cattle_Y_E00992;Parent=Cattle_Y_T00793;Dbxref=GeneID:132344665,GenBank:XM_059884307.1;gbkey=mRNA;gene=LOC132344665;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00793;gene_id=Cattle_Y_G00576;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884307.1-1
haplotype2-0000357	CAT	CDS	34050913	34051244	.	-	2	ID=Cattle_Y_C00798;Parent=Cattle_Y_T00793;Dbxref=GeneID:132344665,GenBank:XP_059740290.1;Name=XP_059740290.1;gbkey=CDS;gene=LOC132344665;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740290.1;gene_id=Cattle_Y_G00576;transcript_id=Cattle_Y_T00793;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34051317	34051440	.	-	0	ID=Cattle_Y_C00799;Parent=Cattle_Y_T00793;Dbxref=GeneID:132344665,GenBank:XP_059740290.1;Name=XP_059740290.1;gbkey=CDS;gene=LOC132344665;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740290.1;gene_id=Cattle_Y_G00576;transcript_id=Cattle_Y_T00793;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	34076844	34087373	.	-	.	ID=Cattle_Y_G00577;Dbxref=GeneID:132344542;Name=LOC132344542;description=uncharacterized LOC132344542;gbkey=Gene;gene=LOC132344542;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00577;source_id=gene-LOC132344542
haplotype2-0000357	CAT	exon	34076844	34076983	.	-	.	ID=Cattle_Y_T00794;Parent=Cattle_Y_G00577;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00577;transcript_id=Cattle_Y_T00794;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542-4
haplotype2-0000357	CAT	exon	34078682	34078797	.	-	.	ID=Cattle_Y_T00795;Parent=Cattle_Y_G00577;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00577;transcript_id=Cattle_Y_T00795;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542-3
haplotype2-0000357	CAT	exon	34079506	34079644	.	-	.	ID=Cattle_Y_T00796;Parent=Cattle_Y_G00577;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00577;transcript_id=Cattle_Y_T00796;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542-2
haplotype2-0000357	CAT	exon	34086982	34087373	.	-	.	ID=Cattle_Y_T00797;Parent=Cattle_Y_G00577;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00577;transcript_id=Cattle_Y_T00797;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542
haplotype2-0000357	CAT	gene	34095356	34150404	.	+	.	ID=Cattle_Y_G00578;Dbxref=GeneID:132344664;Name=LOC132344664;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344664;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00578;source_id=gene-LOC132344664
haplotype2-0000357	CAT	exon	34095356	34095479	.	+	.	ID=Cattle_Y_T00798;Parent=Cattle_Y_G00578;Dbxref=GeneID:132344664;gbkey=exon;gene=LOC132344664;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00578;transcript_id=Cattle_Y_T00798;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344664-6
haplotype2-0000357	CAT	exon	34148439	34148833	.	+	.	ID=Cattle_Y_T00799;Parent=Cattle_Y_G00578;Dbxref=GeneID:132344664;gbkey=exon;gene=LOC132344664;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00578;transcript_id=Cattle_Y_T00799;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344664-5
haplotype2-0000357	CAT	exon	34149601	34149676	.	+	.	ID=Cattle_Y_T00800;Parent=Cattle_Y_G00578;Dbxref=GeneID:132344664;gbkey=exon;gene=LOC132344664;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00578;transcript_id=Cattle_Y_T00800;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344664-4
haplotype2-0000357	CAT	exon	34149860	34149973	.	+	.	ID=Cattle_Y_T00801;Parent=Cattle_Y_G00578;Dbxref=GeneID:132344664;gbkey=exon;gene=LOC132344664;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00578;transcript_id=Cattle_Y_T00801;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344664-3
haplotype2-0000357	CAT	exon	34150067	34150210	.	+	.	ID=Cattle_Y_T00802;Parent=Cattle_Y_G00578;Dbxref=GeneID:132344664;gbkey=exon;gene=LOC132344664;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00578;transcript_id=Cattle_Y_T00802;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344664-2
haplotype2-0000357	CAT	exon	34150327	34150404	.	+	.	ID=Cattle_Y_T00803;Parent=Cattle_Y_G00578;Dbxref=GeneID:132344664;gbkey=exon;gene=LOC132344664;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00578;transcript_id=Cattle_Y_T00803;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344664
haplotype2-0000357	CAT	gene	34106706	34117759	.	-	.	ID=Cattle_Y_G00579;Dbxref=GeneID:132344705;Name=LOC132344705;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344705;gene_biotype=protein_coding;gene_id=Cattle_Y_G00579;source_id=gene-LOC132344705
haplotype2-0000357	CAT	mRNA	34106706	34117759	.	-	.	ID=Cattle_Y_T00804;Parent=Cattle_Y_G00579;Dbxref=GeneID:132344705,GenBank:XM_059884349.1;Name=XM_059884349.1;gbkey=mRNA;gene=LOC132344705;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00804;gene_id=Cattle_Y_G00579;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884349.1
haplotype2-0000357	CAT	exon	34106706	34108513	.	-	.	ID=Cattle_Y_E00993;Parent=Cattle_Y_T00804;Dbxref=GeneID:132344705,GenBank:XM_059884349.1;gbkey=mRNA;gene=LOC132344705;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00804;gene_id=Cattle_Y_G00579;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884349.1-1
haplotype2-0000357	CAT	exon	34117609	34117759	.	-	.	ID=Cattle_Y_E00994;Parent=Cattle_Y_T00804;Dbxref=GeneID:132344705,GenBank:XM_059884349.1;gbkey=mRNA;gene=LOC132344705;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00804;gene_id=Cattle_Y_G00579;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884349.1-1
haplotype2-0000357	CAT	CDS	34106811	34108442	.	-	0	ID=Cattle_Y_C00800;Parent=Cattle_Y_T00804;gene_id=Cattle_Y_G00579;transcript_id=Cattle_Y_T00804;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	34123834	34124571	.	-	.	ID=Cattle_Y_G00580;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00580;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	34123834	34124571	.	-	.	ID=Cattle_Y_T00805;Parent=Cattle_Y_G00580;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00580;transcript_id=Cattle_Y_T00805;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	34316861	34317599	.	+	.	ID=Cattle_Y_G00581;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00581;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	34316861	34317599	.	+	.	ID=Cattle_Y_T00806;Parent=Cattle_Y_G00581;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00581;transcript_id=Cattle_Y_T00806;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	34357704	34359871	.	-	.	ID=Cattle_Y_G00582;Dbxref=GeneID:132344663;Name=LOC132344663;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344663;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00582;source_id=gene-LOC132344663
haplotype2-0000357	CAT	exon	34357704	34357781	.	-	.	ID=Cattle_Y_T00807;Parent=Cattle_Y_G00582;Dbxref=GeneID:132344663;gbkey=exon;gene=LOC132344663;model_evidence=Supporting evidence includes similarity to: 6 Proteins;pseudo=true;gene_id=Cattle_Y_G00582;transcript_id=Cattle_Y_T00807;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344663-6
haplotype2-0000357	CAT	exon	34357898	34358042	.	-	.	ID=Cattle_Y_T00808;Parent=Cattle_Y_G00582;Dbxref=GeneID:132344663;gbkey=exon;gene=LOC132344663;model_evidence=Supporting evidence includes similarity to: 6 Proteins;pseudo=true;gene_id=Cattle_Y_G00582;transcript_id=Cattle_Y_T00808;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344663-5
haplotype2-0000357	CAT	exon	34358138	34358242	.	-	.	ID=Cattle_Y_T00809;Parent=Cattle_Y_G00582;Dbxref=GeneID:132344663;gbkey=exon;gene=LOC132344663;model_evidence=Supporting evidence includes similarity to: 6 Proteins;pseudo=true;gene_id=Cattle_Y_G00582;transcript_id=Cattle_Y_T00809;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344663-4
haplotype2-0000357	CAT	exon	34358419	34358500	.	-	.	ID=Cattle_Y_T00810;Parent=Cattle_Y_G00582;Dbxref=GeneID:132344663;gbkey=exon;gene=LOC132344663;model_evidence=Supporting evidence includes similarity to: 6 Proteins;pseudo=true;gene_id=Cattle_Y_G00582;transcript_id=Cattle_Y_T00810;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344663-3
haplotype2-0000357	CAT	exon	34359260	34359682	.	-	.	ID=Cattle_Y_T00811;Parent=Cattle_Y_G00582;Dbxref=GeneID:132344663;gbkey=exon;gene=LOC132344663;model_evidence=Supporting evidence includes similarity to: 6 Proteins;pseudo=true;gene_id=Cattle_Y_G00582;transcript_id=Cattle_Y_T00811;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344663-2
haplotype2-0000357	CAT	exon	34359749	34359871	.	-	.	ID=Cattle_Y_T00812;Parent=Cattle_Y_G00582;Dbxref=GeneID:132344663;gbkey=exon;gene=LOC132344663;model_evidence=Supporting evidence includes similarity to: 6 Proteins;pseudo=true;gene_id=Cattle_Y_G00582;transcript_id=Cattle_Y_T00812;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344663
haplotype2-0000357	CAT	gene	34429503	34431927	.	+	.	ID=Cattle_Y_G00583;Dbxref=GeneID:132344540;Name=LOC132344540;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344540;gene_biotype=protein_coding;gene_id=Cattle_Y_G00583;source_id=gene-LOC132344540
haplotype2-0000357	CAT	mRNA	34429503	34431927	.	+	.	ID=Cattle_Y_T00813;Parent=Cattle_Y_G00583;Dbxref=GeneID:132344540,GenBank:XM_059884228.1;Name=XM_059884228.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon;exception=unclassified transcription discrepancy;gbkey=mRNA;gene=LOC132344540;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 74%25 coverage of the annotated genomic feature by RNAseq alignments;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00813;gene_id=Cattle_Y_G00583;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884228.1
haplotype2-0000357	CAT	exon	34429503	34430020	.	+	.	ID=Cattle_Y_E00995;Parent=Cattle_Y_T00813;Dbxref=GeneID:132344540,GenBank:XM_059884228.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon;exception=unclassified transcription discrepancy;gbkey=mRNA;gene=LOC132344540;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00813;gene_id=Cattle_Y_G00583;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884228.1-1
haplotype2-0000357	CAT	exon	34430534	34430764	.	+	.	ID=Cattle_Y_E00996;Parent=Cattle_Y_T00813;Dbxref=GeneID:132344540,GenBank:XM_059884228.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon;exception=unclassified transcription discrepancy;gbkey=mRNA;gene=LOC132344540;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00813;gene_id=Cattle_Y_G00583;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884228.1-2
haplotype2-0000357	CAT	exon	34430766	34431193	.	+	.	ID=Cattle_Y_E00997;Parent=Cattle_Y_T00813;Dbxref=GeneID:132344540,GenBank:XM_059884228.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon;exception=unclassified transcription discrepancy;gbkey=mRNA;gene=LOC132344540;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00813;gene_id=Cattle_Y_G00583;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884228.1-3
haplotype2-0000357	CAT	exon	34431909	34431927	.	+	.	ID=Cattle_Y_E00998;Parent=Cattle_Y_T00813;Dbxref=GeneID:132344540,GenBank:XM_059884228.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon;exception=unclassified transcription discrepancy;gbkey=mRNA;gene=LOC132344540;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00813;gene_id=Cattle_Y_G00583;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884228.1-4
haplotype2-0000357	CAT	CDS	34429508	34430020	.	+	0	ID=Cattle_Y_C00801;Parent=Cattle_Y_T00813;Dbxref=GeneID:132344540,GenBank:XP_059740211.1;Name=XP_059740211.1;Note=The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon;exception=unclassified translation discrepancy;gbkey=CDS;gene=LOC132344540;product=LOW QUALITY PROTEIN: heat shock transcription factor, Y-linked-like;protein_id=XP_059740211.1;gene_id=Cattle_Y_G00583;transcript_id=Cattle_Y_T00813;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34430534	34430764	.	+	0	ID=Cattle_Y_C00802;Parent=Cattle_Y_T00813;Dbxref=GeneID:132344540,GenBank:XP_059740211.1;Name=XP_059740211.1;Note=The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon;exception=unclassified translation discrepancy;gbkey=CDS;gene=LOC132344540;product=LOW QUALITY PROTEIN: heat shock transcription factor, Y-linked-like;protein_id=XP_059740211.1;gene_id=Cattle_Y_G00583;transcript_id=Cattle_Y_T00813;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34430766	34431193	.	+	0	ID=Cattle_Y_C00803;Parent=Cattle_Y_T00813;Dbxref=GeneID:132344540,GenBank:XP_059740211.1;Name=XP_059740211.1;Note=The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon;exception=unclassified translation discrepancy;gbkey=CDS;gene=LOC132344540;product=LOW QUALITY PROTEIN: heat shock transcription factor, Y-linked-like;protein_id=XP_059740211.1;gene_id=Cattle_Y_G00583;transcript_id=Cattle_Y_T00813;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34431909	34431927	.	+	1	ID=Cattle_Y_C00804;Parent=Cattle_Y_T00813;Dbxref=GeneID:132344540,GenBank:XP_059740211.1;Name=XP_059740211.1;Note=The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon;exception=unclassified translation discrepancy;gbkey=CDS;gene=LOC132344540;product=LOW QUALITY PROTEIN: heat shock transcription factor, Y-linked-like;protein_id=XP_059740211.1;gene_id=Cattle_Y_G00583;transcript_id=Cattle_Y_T00813;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	34448597	34462346	.	-	.	ID=Cattle_Y_G00584;Dbxref=GeneID:132344525;Name=LOC132344525;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC132344525;gene_biotype=protein_coding;gene_id=Cattle_Y_G00584;source_id=gene-LOC132344525
haplotype2-0000357	CAT	mRNA	34448597	34453517	.	-	.	ID=Cattle_Y_T00814;Parent=Cattle_Y_G00584;Dbxref=GeneID:132344525,GenBank:XM_059884206.1;Name=XM_059884206.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;model_evidence=Supporting evidence includes similarity to: 12 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X1;transcript_id=Cattle_Y_T00814;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884206.1
haplotype2-0000357	CAT	exon	34448597	34449477	.	-	.	ID=Cattle_Y_E00999;Parent=Cattle_Y_T00814;Dbxref=GeneID:132344525,GenBank:XM_059884206.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00814;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884206.1-4
haplotype2-0000357	CAT	exon	34450639	34451244	.	-	.	ID=Cattle_Y_E01000;Parent=Cattle_Y_T00814;Dbxref=GeneID:132344525,GenBank:XM_059884206.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00814;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884206.1-3
haplotype2-0000357	CAT	exon	34451519	34451841	.	-	.	ID=Cattle_Y_E01001;Parent=Cattle_Y_T00814;Dbxref=GeneID:132344525,GenBank:XM_059884206.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00814;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884206.1-2
haplotype2-0000357	CAT	exon	34453164	34453517	.	-	.	ID=Cattle_Y_E01002;Parent=Cattle_Y_T00814;Dbxref=GeneID:132344525,GenBank:XM_059884206.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00814;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884206.1-1
haplotype2-0000357	CAT	CDS	34448901	34449477	.	-	1	ID=Cattle_Y_C00805;Parent=Cattle_Y_T00814;Dbxref=GeneID:132344525,GenBank:XP_059740189.1;Name=XP_059740189.1;gbkey=CDS;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740189.1;gene_id=Cattle_Y_G00584;transcript_id=Cattle_Y_T00814;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34450639	34451244	.	-	1	ID=Cattle_Y_C00806;Parent=Cattle_Y_T00814;Dbxref=GeneID:132344525,GenBank:XP_059740189.1;Name=XP_059740189.1;gbkey=CDS;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740189.1;gene_id=Cattle_Y_G00584;transcript_id=Cattle_Y_T00814;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34451519	34451841	.	-	0	ID=Cattle_Y_C00807;Parent=Cattle_Y_T00814;Dbxref=GeneID:132344525,GenBank:XP_059740189.1;Name=XP_059740189.1;gbkey=CDS;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740189.1;gene_id=Cattle_Y_G00584;transcript_id=Cattle_Y_T00814;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34453164	34453313	.	-	0	ID=Cattle_Y_C00808;Parent=Cattle_Y_T00814;Dbxref=GeneID:132344525,GenBank:XP_059740189.1;Name=XP_059740189.1;gbkey=CDS;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740189.1;gene_id=Cattle_Y_G00584;transcript_id=Cattle_Y_T00814;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34448597	34462346	.	-	.	ID=Cattle_Y_T00815;Parent=Cattle_Y_G00584;Dbxref=GeneID:132344525,GenBank:XM_059884208.1;Name=XM_059884208.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;model_evidence=Supporting evidence includes similarity to: 12 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X2;transcript_id=Cattle_Y_T00815;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884208.1
haplotype2-0000357	CAT	exon	34448597	34449477	.	-	.	ID=Cattle_Y_E01003;Parent=Cattle_Y_T00815;Dbxref=GeneID:132344525,GenBank:XM_059884208.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00815;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884208.1-6
haplotype2-0000357	CAT	exon	34450639	34451244	.	-	.	ID=Cattle_Y_E01004;Parent=Cattle_Y_T00815;Dbxref=GeneID:132344525,GenBank:XM_059884208.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00815;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884208.1-5
haplotype2-0000357	CAT	exon	34451519	34451841	.	-	.	ID=Cattle_Y_E01005;Parent=Cattle_Y_T00815;Dbxref=GeneID:132344525,GenBank:XM_059884208.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00815;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884208.1-4
haplotype2-0000357	CAT	exon	34453164	34453230	.	-	.	ID=Cattle_Y_E01006;Parent=Cattle_Y_T00815;Dbxref=GeneID:132344525,GenBank:XM_059884208.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00815;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884208.1-3
haplotype2-0000357	CAT	exon	34461484	34461591	.	-	.	ID=Cattle_Y_E01007;Parent=Cattle_Y_T00815;Dbxref=GeneID:132344525,GenBank:XM_059884208.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00815;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884208.1-2
haplotype2-0000357	CAT	exon	34462133	34462346	.	-	.	ID=Cattle_Y_E01008;Parent=Cattle_Y_T00815;Dbxref=GeneID:132344525,GenBank:XM_059884208.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00815;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884208.1-1
haplotype2-0000357	CAT	CDS	34448901	34449477	.	-	1	ID=Cattle_Y_C00809;Parent=Cattle_Y_T00815;Dbxref=GeneID:132344525,GenBank:XP_059740191.1;Name=XP_059740191.1;gbkey=CDS;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740191.1;gene_id=Cattle_Y_G00584;transcript_id=Cattle_Y_T00815;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34450639	34451244	.	-	1	ID=Cattle_Y_C00810;Parent=Cattle_Y_T00815;Dbxref=GeneID:132344525,GenBank:XP_059740191.1;Name=XP_059740191.1;gbkey=CDS;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740191.1;gene_id=Cattle_Y_G00584;transcript_id=Cattle_Y_T00815;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34451519	34451841	.	-	0	ID=Cattle_Y_C00811;Parent=Cattle_Y_T00815;Dbxref=GeneID:132344525,GenBank:XP_059740191.1;Name=XP_059740191.1;gbkey=CDS;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740191.1;gene_id=Cattle_Y_G00584;transcript_id=Cattle_Y_T00815;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34453164	34453199	.	-	0	ID=Cattle_Y_C00812;Parent=Cattle_Y_T00815;Dbxref=GeneID:132344525,GenBank:XP_059740191.1;Name=XP_059740191.1;gbkey=CDS;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740191.1;gene_id=Cattle_Y_G00584;transcript_id=Cattle_Y_T00815;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34448597	34462346	.	-	.	ID=Cattle_Y_T00816;Parent=Cattle_Y_G00584;Dbxref=GeneID:132344525,GenBank:XM_059884209.1;Name=XM_059884209.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;model_evidence=Supporting evidence includes similarity to: 12 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X3;transcript_id=Cattle_Y_T00816;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884209.1
haplotype2-0000357	CAT	exon	34448597	34449477	.	-	.	ID=Cattle_Y_E01009;Parent=Cattle_Y_T00816;Dbxref=GeneID:132344525,GenBank:XM_059884209.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00816;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884209.1-6
haplotype2-0000357	CAT	exon	34450639	34451244	.	-	.	ID=Cattle_Y_E01010;Parent=Cattle_Y_T00816;Dbxref=GeneID:132344525,GenBank:XM_059884209.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00816;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884209.1-5
haplotype2-0000357	CAT	exon	34451519	34451841	.	-	.	ID=Cattle_Y_E01011;Parent=Cattle_Y_T00816;Dbxref=GeneID:132344525,GenBank:XM_059884209.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00816;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884209.1-4
haplotype2-0000357	CAT	exon	34453164	34453230	.	-	.	ID=Cattle_Y_E01012;Parent=Cattle_Y_T00816;Dbxref=GeneID:132344525,GenBank:XM_059884209.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00816;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884209.1-3
haplotype2-0000357	CAT	exon	34461484	34461591	.	-	.	ID=Cattle_Y_E01013;Parent=Cattle_Y_T00816;Dbxref=GeneID:132344525,GenBank:XM_059884209.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00816;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884209.1-2
haplotype2-0000357	CAT	exon	34462096	34462346	.	-	.	ID=Cattle_Y_E01014;Parent=Cattle_Y_T00816;Dbxref=GeneID:132344525,GenBank:XM_059884209.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00816;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884209.1-1
haplotype2-0000357	CAT	CDS	34448901	34449477	.	-	1	ID=Cattle_Y_C00813;Parent=Cattle_Y_T00816;Dbxref=GeneID:132344525,GenBank:XP_059740192.1;Name=XP_059740192.1;gbkey=CDS;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740192.1;gene_id=Cattle_Y_G00584;transcript_id=Cattle_Y_T00816;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34450639	34451244	.	-	1	ID=Cattle_Y_C00814;Parent=Cattle_Y_T00816;Dbxref=GeneID:132344525,GenBank:XP_059740192.1;Name=XP_059740192.1;gbkey=CDS;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740192.1;gene_id=Cattle_Y_G00584;transcript_id=Cattle_Y_T00816;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34451519	34451841	.	-	0	ID=Cattle_Y_C00815;Parent=Cattle_Y_T00816;Dbxref=GeneID:132344525,GenBank:XP_059740192.1;Name=XP_059740192.1;gbkey=CDS;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740192.1;gene_id=Cattle_Y_G00584;transcript_id=Cattle_Y_T00816;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34453164	34453199	.	-	0	ID=Cattle_Y_C00816;Parent=Cattle_Y_T00816;Dbxref=GeneID:132344525,GenBank:XP_059740192.1;Name=XP_059740192.1;gbkey=CDS;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740192.1;gene_id=Cattle_Y_G00584;transcript_id=Cattle_Y_T00816;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34448597	34462066	.	-	.	ID=Cattle_Y_T00817;Parent=Cattle_Y_G00584;Dbxref=GeneID:132344525,GenBank:XM_059884210.1;Name=XM_059884210.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;model_evidence=Supporting evidence includes similarity to: 12 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X4;transcript_id=Cattle_Y_T00817;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884210.1
haplotype2-0000357	CAT	exon	34448597	34449477	.	-	.	ID=Cattle_Y_E01015;Parent=Cattle_Y_T00817;Dbxref=GeneID:132344525,GenBank:XM_059884210.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00817;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884210.1-6
haplotype2-0000357	CAT	exon	34450639	34451244	.	-	.	ID=Cattle_Y_E01016;Parent=Cattle_Y_T00817;Dbxref=GeneID:132344525,GenBank:XM_059884210.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00817;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884210.1-5
haplotype2-0000357	CAT	exon	34451519	34451841	.	-	.	ID=Cattle_Y_E01017;Parent=Cattle_Y_T00817;Dbxref=GeneID:132344525,GenBank:XM_059884210.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00817;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884210.1-4
haplotype2-0000357	CAT	exon	34453164	34453230	.	-	.	ID=Cattle_Y_E01018;Parent=Cattle_Y_T00817;Dbxref=GeneID:132344525,GenBank:XM_059884210.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00817;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884210.1-3
haplotype2-0000357	CAT	exon	34461484	34461591	.	-	.	ID=Cattle_Y_E01019;Parent=Cattle_Y_T00817;Dbxref=GeneID:132344525,GenBank:XM_059884210.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00817;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884210.1-2
haplotype2-0000357	CAT	exon	34461816	34462066	.	-	.	ID=Cattle_Y_E01020;Parent=Cattle_Y_T00817;Dbxref=GeneID:132344525,GenBank:XM_059884210.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00817;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884210.1-1
haplotype2-0000357	CAT	CDS	34448901	34449477	.	-	1	ID=Cattle_Y_C00817;Parent=Cattle_Y_T00817;Dbxref=GeneID:132344525,GenBank:XP_059740193.1;Name=XP_059740193.1;gbkey=CDS;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740193.1;gene_id=Cattle_Y_G00584;transcript_id=Cattle_Y_T00817;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34450639	34451244	.	-	1	ID=Cattle_Y_C00818;Parent=Cattle_Y_T00817;Dbxref=GeneID:132344525,GenBank:XP_059740193.1;Name=XP_059740193.1;gbkey=CDS;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740193.1;gene_id=Cattle_Y_G00584;transcript_id=Cattle_Y_T00817;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34451519	34451841	.	-	0	ID=Cattle_Y_C00819;Parent=Cattle_Y_T00817;Dbxref=GeneID:132344525,GenBank:XP_059740193.1;Name=XP_059740193.1;gbkey=CDS;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740193.1;gene_id=Cattle_Y_G00584;transcript_id=Cattle_Y_T00817;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34453164	34453199	.	-	0	ID=Cattle_Y_C00820;Parent=Cattle_Y_T00817;Dbxref=GeneID:132344525,GenBank:XP_059740193.1;Name=XP_059740193.1;gbkey=CDS;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740193.1;gene_id=Cattle_Y_G00584;transcript_id=Cattle_Y_T00817;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34448597	34462345	.	-	.	ID=Cattle_Y_T00818;Parent=Cattle_Y_G00584;Dbxref=GeneID:132344525,GenBank:XM_059884211.1;Name=XM_059884211.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;model_evidence=Supporting evidence includes similarity to: 10 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X5;transcript_id=Cattle_Y_T00818;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884211.1
haplotype2-0000357	CAT	exon	34448597	34449477	.	-	.	ID=Cattle_Y_E01021;Parent=Cattle_Y_T00818;Dbxref=GeneID:132344525,GenBank:XM_059884211.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00818;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884211.1-5
haplotype2-0000357	CAT	exon	34450639	34451244	.	-	.	ID=Cattle_Y_E01022;Parent=Cattle_Y_T00818;Dbxref=GeneID:132344525,GenBank:XM_059884211.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00818;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884211.1-4
haplotype2-0000357	CAT	exon	34451519	34451841	.	-	.	ID=Cattle_Y_E01023;Parent=Cattle_Y_T00818;Dbxref=GeneID:132344525,GenBank:XM_059884211.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00818;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884211.1-3
haplotype2-0000357	CAT	exon	34461484	34461591	.	-	.	ID=Cattle_Y_E01024;Parent=Cattle_Y_T00818;Dbxref=GeneID:132344525,GenBank:XM_059884211.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00818;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884211.1-2
haplotype2-0000357	CAT	exon	34462133	34462345	.	-	.	ID=Cattle_Y_E01025;Parent=Cattle_Y_T00818;Dbxref=GeneID:132344525,GenBank:XM_059884211.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00818;gene_id=Cattle_Y_G00584;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884211.1-1
haplotype2-0000357	CAT	CDS	34448901	34449477	.	-	1	ID=Cattle_Y_C00821;Parent=Cattle_Y_T00818;Dbxref=GeneID:132344525,GenBank:XP_059740194.1;Name=XP_059740194.1;gbkey=CDS;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like isoform X3;protein_id=XP_059740194.1;gene_id=Cattle_Y_G00584;transcript_id=Cattle_Y_T00818;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34450639	34451244	.	-	1	ID=Cattle_Y_C00822;Parent=Cattle_Y_T00818;Dbxref=GeneID:132344525,GenBank:XP_059740194.1;Name=XP_059740194.1;gbkey=CDS;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like isoform X3;protein_id=XP_059740194.1;gene_id=Cattle_Y_G00584;transcript_id=Cattle_Y_T00818;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34451519	34451814	.	-	0	ID=Cattle_Y_C00823;Parent=Cattle_Y_T00818;Dbxref=GeneID:132344525,GenBank:XP_059740194.1;Name=XP_059740194.1;gbkey=CDS;gene=LOC132344525;product=melanoma antigen preferentially expressed in tumors-like isoform X3;protein_id=XP_059740194.1;gene_id=Cattle_Y_G00584;transcript_id=Cattle_Y_T00818;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	34470452	34483669	.	-	.	ID=Cattle_Y_G00585;Dbxref=GeneID:132344524;Name=LOC132344524;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC132344524;gene_biotype=protein_coding;gene_id=Cattle_Y_G00585;source_id=gene-LOC132344524
haplotype2-0000357	CAT	mRNA	34470453	34483668	.	-	.	ID=Cattle_Y_T00819;Parent=Cattle_Y_G00585;Dbxref=GeneID:132344524,GenBank:XM_059884200.1;Name=XM_059884200.1;gbkey=mRNA;gene=LOC132344524;model_evidence=Supporting evidence includes similarity to: 2 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X1;transcript_id=Cattle_Y_T00819;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884200.1
haplotype2-0000357	CAT	exon	34470453	34472203	.	-	.	ID=Cattle_Y_E01026;Parent=Cattle_Y_T00819;Dbxref=GeneID:132344524,GenBank:XM_059884200.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00819;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884200.1-6
haplotype2-0000357	CAT	exon	34473365	34473970	.	-	.	ID=Cattle_Y_E01027;Parent=Cattle_Y_T00819;Dbxref=GeneID:132344524,GenBank:XM_059884200.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00819;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884200.1-6
haplotype2-0000357	CAT	exon	34474253	34474575	.	-	.	ID=Cattle_Y_E01028;Parent=Cattle_Y_T00819;Dbxref=GeneID:132344524,GenBank:XM_059884200.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00819;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884200.1-6
haplotype2-0000357	CAT	exon	34475898	34475964	.	-	.	ID=Cattle_Y_E01029;Parent=Cattle_Y_T00819;Dbxref=GeneID:132344524,GenBank:XM_059884200.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00819;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884200.1-3
haplotype2-0000357	CAT	exon	34482800	34482907	.	-	.	ID=Cattle_Y_E01030;Parent=Cattle_Y_T00819;Dbxref=GeneID:132344524,GenBank:XM_059884200.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00819;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884200.1-2
haplotype2-0000357	CAT	exon	34483449	34483668	.	-	.	ID=Cattle_Y_E01031;Parent=Cattle_Y_T00819;Dbxref=GeneID:132344524,GenBank:XM_059884200.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00819;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884200.1-1
haplotype2-0000357	CAT	CDS	34471627	34472203	.	-	1	ID=Cattle_Y_C00824;Parent=Cattle_Y_T00819;gene_id=Cattle_Y_G00585;transcript_id=Cattle_Y_T00819;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34473365	34473970	.	-	1	ID=Cattle_Y_C00825;Parent=Cattle_Y_T00819;gene_id=Cattle_Y_G00585;transcript_id=Cattle_Y_T00819;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34474253	34474575	.	-	0	ID=Cattle_Y_C00826;Parent=Cattle_Y_T00819;gene_id=Cattle_Y_G00585;transcript_id=Cattle_Y_T00819;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34475898	34475933	.	-	0	ID=Cattle_Y_C00827;Parent=Cattle_Y_T00819;gene_id=Cattle_Y_G00585;transcript_id=Cattle_Y_T00819;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34470453	34483668	.	-	.	ID=Cattle_Y_T00820;Parent=Cattle_Y_G00585;Dbxref=GeneID:132344524,GenBank:XM_059884201.1;Name=XM_059884201.1;gbkey=mRNA;gene=LOC132344524;model_evidence=Supporting evidence includes similarity to: 2 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X2;transcript_id=Cattle_Y_T00820;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884201.1
haplotype2-0000357	CAT	exon	34470453	34472203	.	-	.	ID=Cattle_Y_E01032;Parent=Cattle_Y_T00820;Dbxref=GeneID:132344524,GenBank:XM_059884201.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00820;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884201.1-6
haplotype2-0000357	CAT	exon	34473365	34473970	.	-	.	ID=Cattle_Y_E01033;Parent=Cattle_Y_T00820;Dbxref=GeneID:132344524,GenBank:XM_059884201.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00820;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884201.1-6
haplotype2-0000357	CAT	exon	34474253	34474575	.	-	.	ID=Cattle_Y_E01034;Parent=Cattle_Y_T00820;Dbxref=GeneID:132344524,GenBank:XM_059884201.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00820;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884201.1-6
haplotype2-0000357	CAT	exon	34475898	34475964	.	-	.	ID=Cattle_Y_E01035;Parent=Cattle_Y_T00820;Dbxref=GeneID:132344524,GenBank:XM_059884201.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00820;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884201.1-3
haplotype2-0000357	CAT	exon	34482800	34482907	.	-	.	ID=Cattle_Y_E01036;Parent=Cattle_Y_T00820;Dbxref=GeneID:132344524,GenBank:XM_059884201.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00820;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884201.1-2
haplotype2-0000357	CAT	exon	34483412	34483668	.	-	.	ID=Cattle_Y_E01037;Parent=Cattle_Y_T00820;Dbxref=GeneID:132344524,GenBank:XM_059884201.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00820;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884201.1-1
haplotype2-0000357	CAT	CDS	34471627	34472203	.	-	1	ID=Cattle_Y_C00828;Parent=Cattle_Y_T00820;gene_id=Cattle_Y_G00585;transcript_id=Cattle_Y_T00820;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34473365	34473970	.	-	1	ID=Cattle_Y_C00829;Parent=Cattle_Y_T00820;gene_id=Cattle_Y_G00585;transcript_id=Cattle_Y_T00820;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34474253	34474575	.	-	0	ID=Cattle_Y_C00830;Parent=Cattle_Y_T00820;gene_id=Cattle_Y_G00585;transcript_id=Cattle_Y_T00820;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34475898	34475933	.	-	0	ID=Cattle_Y_C00831;Parent=Cattle_Y_T00820;gene_id=Cattle_Y_G00585;transcript_id=Cattle_Y_T00820;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34470453	34483378	.	-	.	ID=Cattle_Y_T00821;Parent=Cattle_Y_G00585;Dbxref=GeneID:132344524,GenBank:XM_059884202.1;Name=XM_059884202.1;gbkey=mRNA;gene=LOC132344524;model_evidence=Supporting evidence includes similarity to: 2 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X3;transcript_id=Cattle_Y_T00821;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884202.1
haplotype2-0000357	CAT	exon	34470453	34472203	.	-	.	ID=Cattle_Y_E01038;Parent=Cattle_Y_T00821;Dbxref=GeneID:132344524,GenBank:XM_059884202.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00821;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884202.1-6
haplotype2-0000357	CAT	exon	34473365	34473970	.	-	.	ID=Cattle_Y_E01039;Parent=Cattle_Y_T00821;Dbxref=GeneID:132344524,GenBank:XM_059884202.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00821;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884202.1-6
haplotype2-0000357	CAT	exon	34474253	34474575	.	-	.	ID=Cattle_Y_E01040;Parent=Cattle_Y_T00821;Dbxref=GeneID:132344524,GenBank:XM_059884202.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00821;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884202.1-6
haplotype2-0000357	CAT	exon	34475898	34475964	.	-	.	ID=Cattle_Y_E01041;Parent=Cattle_Y_T00821;Dbxref=GeneID:132344524,GenBank:XM_059884202.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00821;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884202.1-3
haplotype2-0000357	CAT	exon	34482800	34482907	.	-	.	ID=Cattle_Y_E01042;Parent=Cattle_Y_T00821;Dbxref=GeneID:132344524,GenBank:XM_059884202.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00821;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884202.1-2
haplotype2-0000357	CAT	exon	34483132	34483378	.	-	.	ID=Cattle_Y_E01043;Parent=Cattle_Y_T00821;Dbxref=GeneID:132344524,GenBank:XM_059884202.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00821;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884202.1-1
haplotype2-0000357	CAT	CDS	34471627	34472203	.	-	1	ID=Cattle_Y_C00832;Parent=Cattle_Y_T00821;gene_id=Cattle_Y_G00585;transcript_id=Cattle_Y_T00821;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34473365	34473970	.	-	1	ID=Cattle_Y_C00833;Parent=Cattle_Y_T00821;gene_id=Cattle_Y_G00585;transcript_id=Cattle_Y_T00821;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34474253	34474575	.	-	0	ID=Cattle_Y_C00834;Parent=Cattle_Y_T00821;gene_id=Cattle_Y_G00585;transcript_id=Cattle_Y_T00821;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34475898	34475933	.	-	0	ID=Cattle_Y_C00835;Parent=Cattle_Y_T00821;gene_id=Cattle_Y_G00585;transcript_id=Cattle_Y_T00821;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34470453	34483669	.	-	.	ID=Cattle_Y_T00822;Parent=Cattle_Y_G00585;Dbxref=GeneID:132344524,GenBank:XM_059884203.1;Name=XM_059884203.1;gbkey=mRNA;gene=LOC132344524;model_evidence=Supporting evidence includes similarity to: 2 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X4;transcript_id=Cattle_Y_T00822;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884203.1
haplotype2-0000357	CAT	exon	34470453	34472203	.	-	.	ID=Cattle_Y_E01044;Parent=Cattle_Y_T00822;Dbxref=GeneID:132344524,GenBank:XM_059884203.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00822;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884203.1-7
haplotype2-0000357	CAT	exon	34473365	34473970	.	-	.	ID=Cattle_Y_E01045;Parent=Cattle_Y_T00822;Dbxref=GeneID:132344524,GenBank:XM_059884203.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00822;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884203.1-7
haplotype2-0000357	CAT	exon	34474253	34474575	.	-	.	ID=Cattle_Y_E01046;Parent=Cattle_Y_T00822;Dbxref=GeneID:132344524,GenBank:XM_059884203.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00822;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884203.1-7
haplotype2-0000357	CAT	exon	34475898	34475964	.	-	.	ID=Cattle_Y_E01047;Parent=Cattle_Y_T00822;Dbxref=GeneID:132344524,GenBank:XM_059884203.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00822;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884203.1-4
haplotype2-0000357	CAT	exon	34477354	34477584	.	-	.	ID=Cattle_Y_E01048;Parent=Cattle_Y_T00822;Dbxref=GeneID:132344524,GenBank:XM_059884203.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00822;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884203.1-3
haplotype2-0000357	CAT	exon	34482800	34482907	.	-	.	ID=Cattle_Y_E01049;Parent=Cattle_Y_T00822;Dbxref=GeneID:132344524,GenBank:XM_059884203.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00822;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884203.1-2
haplotype2-0000357	CAT	exon	34483449	34483669	.	-	.	ID=Cattle_Y_E01050;Parent=Cattle_Y_T00822;Dbxref=GeneID:132344524,GenBank:XM_059884203.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00822;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884203.1-1
haplotype2-0000357	CAT	CDS	34471627	34472203	.	-	1	ID=Cattle_Y_C00836;Parent=Cattle_Y_T00822;gene_id=Cattle_Y_G00585;transcript_id=Cattle_Y_T00822;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34473365	34473970	.	-	1	ID=Cattle_Y_C00837;Parent=Cattle_Y_T00822;gene_id=Cattle_Y_G00585;transcript_id=Cattle_Y_T00822;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34474253	34474575	.	-	0	ID=Cattle_Y_C00838;Parent=Cattle_Y_T00822;gene_id=Cattle_Y_G00585;transcript_id=Cattle_Y_T00822;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34475898	34475933	.	-	0	ID=Cattle_Y_C00839;Parent=Cattle_Y_T00822;gene_id=Cattle_Y_G00585;transcript_id=Cattle_Y_T00822;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34470453	34482793	.	-	.	ID=Cattle_Y_T00823;Parent=Cattle_Y_G00585;Dbxref=GeneID:132344524,GenBank:XM_059884204.1;Name=XM_059884204.1;gbkey=mRNA;gene=LOC132344524;model_evidence=Supporting evidence includes similarity to: 2 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X5;transcript_id=Cattle_Y_T00823;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884204.1
haplotype2-0000357	CAT	exon	34470453	34472203	.	-	.	ID=Cattle_Y_E01051;Parent=Cattle_Y_T00823;Dbxref=GeneID:132344524,GenBank:XM_059884204.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00823;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884204.1-5
haplotype2-0000357	CAT	exon	34473365	34473970	.	-	.	ID=Cattle_Y_E01052;Parent=Cattle_Y_T00823;Dbxref=GeneID:132344524,GenBank:XM_059884204.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00823;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884204.1-5
haplotype2-0000357	CAT	exon	34474253	34474575	.	-	.	ID=Cattle_Y_E01053;Parent=Cattle_Y_T00823;Dbxref=GeneID:132344524,GenBank:XM_059884204.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00823;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884204.1-5
haplotype2-0000357	CAT	exon	34475898	34475964	.	-	.	ID=Cattle_Y_E01054;Parent=Cattle_Y_T00823;Dbxref=GeneID:132344524,GenBank:XM_059884204.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00823;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884204.1-2
haplotype2-0000357	CAT	exon	34477354	34482793	.	-	.	ID=Cattle_Y_E01055;Parent=Cattle_Y_T00823;Dbxref=GeneID:132344524,GenBank:XM_059884204.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00823;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884204.1-1
haplotype2-0000357	CAT	CDS	34471627	34472203	.	-	1	ID=Cattle_Y_C00840;Parent=Cattle_Y_T00823;gene_id=Cattle_Y_G00585;transcript_id=Cattle_Y_T00823;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34473365	34473970	.	-	1	ID=Cattle_Y_C00841;Parent=Cattle_Y_T00823;gene_id=Cattle_Y_G00585;transcript_id=Cattle_Y_T00823;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34474253	34474575	.	-	0	ID=Cattle_Y_C00842;Parent=Cattle_Y_T00823;gene_id=Cattle_Y_G00585;transcript_id=Cattle_Y_T00823;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34475898	34475933	.	-	0	ID=Cattle_Y_C00843;Parent=Cattle_Y_T00823;gene_id=Cattle_Y_G00585;transcript_id=Cattle_Y_T00823;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34470452	34483669	.	-	.	ID=Cattle_Y_T00824;Parent=Cattle_Y_G00585;Dbxref=GeneID:132344524,GenBank:XM_059884205.1;Name=XM_059884205.1;gbkey=mRNA;gene=LOC132344524;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X6;transcript_id=Cattle_Y_T00824;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884205.1
haplotype2-0000357	CAT	exon	34470452	34472203	.	-	.	ID=Cattle_Y_E01056;Parent=Cattle_Y_T00824;Dbxref=GeneID:132344524,GenBank:XM_059884205.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X6;transcript_id=Cattle_Y_T00824;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884205.1-5
haplotype2-0000357	CAT	exon	34473365	34473970	.	-	.	ID=Cattle_Y_E01057;Parent=Cattle_Y_T00824;Dbxref=GeneID:132344524,GenBank:XM_059884205.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X6;transcript_id=Cattle_Y_T00824;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884205.1-5
haplotype2-0000357	CAT	exon	34474253	34474575	.	-	.	ID=Cattle_Y_E01058;Parent=Cattle_Y_T00824;Dbxref=GeneID:132344524,GenBank:XM_059884205.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X6;transcript_id=Cattle_Y_T00824;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884205.1-3
haplotype2-0000357	CAT	exon	34482800	34482907	.	-	.	ID=Cattle_Y_E01059;Parent=Cattle_Y_T00824;Dbxref=GeneID:132344524,GenBank:XM_059884205.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X6;transcript_id=Cattle_Y_T00824;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884205.1-2
haplotype2-0000357	CAT	exon	34483449	34483669	.	-	.	ID=Cattle_Y_E01060;Parent=Cattle_Y_T00824;Dbxref=GeneID:132344524,GenBank:XM_059884205.1;gbkey=mRNA;gene=LOC132344524;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X6;transcript_id=Cattle_Y_T00824;gene_id=Cattle_Y_G00585;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884205.1-1
haplotype2-0000357	CAT	CDS	34471627	34472203	.	-	1	ID=Cattle_Y_C00844;Parent=Cattle_Y_T00824;gene_id=Cattle_Y_G00585;transcript_id=Cattle_Y_T00824;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34473365	34473970	.	-	1	ID=Cattle_Y_C00845;Parent=Cattle_Y_T00824;gene_id=Cattle_Y_G00585;transcript_id=Cattle_Y_T00824;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34474253	34474548	.	-	0	ID=Cattle_Y_C00846;Parent=Cattle_Y_T00824;gene_id=Cattle_Y_G00585;transcript_id=Cattle_Y_T00824;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	34492633	34504943	.	-	.	ID=Cattle_Y_G00586;Dbxref=GeneID:112442075;Name=LOC112442075;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC112442075;gene_biotype=protein_coding;gene_id=Cattle_Y_G00586;source_id=gene-LOC112442075
haplotype2-0000357	CAT	mRNA	34492633	34504943	.	-	.	ID=Cattle_Y_T00825;Parent=Cattle_Y_G00586;Dbxref=GeneID:112442075,GenBank:XM_059884176.1;Name=XM_059884176.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 14 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X1;transcript_id=Cattle_Y_T00825;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884176.1
haplotype2-0000357	CAT	exon	34492633	34493513	.	-	.	ID=Cattle_Y_E01061;Parent=Cattle_Y_T00825;Dbxref=GeneID:112442075,GenBank:XM_059884176.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00825;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884176.1-6
haplotype2-0000357	CAT	exon	34494675	34495280	.	-	.	ID=Cattle_Y_E01062;Parent=Cattle_Y_T00825;Dbxref=GeneID:112442075,GenBank:XM_059884176.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00825;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884176.1-6
haplotype2-0000357	CAT	exon	34495560	34495882	.	-	.	ID=Cattle_Y_E01063;Parent=Cattle_Y_T00825;Dbxref=GeneID:112442075,GenBank:XM_059884176.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00825;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884176.1-6
haplotype2-0000357	CAT	exon	34497205	34497271	.	-	.	ID=Cattle_Y_E01064;Parent=Cattle_Y_T00825;Dbxref=GeneID:112442075,GenBank:XM_059884176.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00825;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884176.1-3
haplotype2-0000357	CAT	exon	34504108	34504215	.	-	.	ID=Cattle_Y_E01065;Parent=Cattle_Y_T00825;Dbxref=GeneID:112442075,GenBank:XM_059884176.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00825;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884176.1-2
haplotype2-0000357	CAT	exon	34504756	34504943	.	-	.	ID=Cattle_Y_E01066;Parent=Cattle_Y_T00825;Dbxref=GeneID:112442075,GenBank:XM_059884176.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00825;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884176.1-1
haplotype2-0000357	CAT	CDS	34492937	34493513	.	-	1	ID=Cattle_Y_C00847;Parent=Cattle_Y_T00825;gene_id=Cattle_Y_G00586;transcript_id=Cattle_Y_T00825;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34494675	34495280	.	-	1	ID=Cattle_Y_C00848;Parent=Cattle_Y_T00825;gene_id=Cattle_Y_G00586;transcript_id=Cattle_Y_T00825;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34495560	34495882	.	-	0	ID=Cattle_Y_C00849;Parent=Cattle_Y_T00825;gene_id=Cattle_Y_G00586;transcript_id=Cattle_Y_T00825;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34497205	34497240	.	-	0	ID=Cattle_Y_C00850;Parent=Cattle_Y_T00825;gene_id=Cattle_Y_G00586;transcript_id=Cattle_Y_T00825;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34492633	34504943	.	-	.	ID=Cattle_Y_T00826;Parent=Cattle_Y_G00586;Dbxref=GeneID:112442075,GenBank:XM_059884178.1;Name=XM_059884178.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 14 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X2;transcript_id=Cattle_Y_T00826;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884178.1
haplotype2-0000357	CAT	exon	34492633	34493513	.	-	.	ID=Cattle_Y_E01067;Parent=Cattle_Y_T00826;Dbxref=GeneID:112442075,GenBank:XM_059884178.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00826;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884178.1-6
haplotype2-0000357	CAT	exon	34494675	34495280	.	-	.	ID=Cattle_Y_E01068;Parent=Cattle_Y_T00826;Dbxref=GeneID:112442075,GenBank:XM_059884178.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00826;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884178.1-6
haplotype2-0000357	CAT	exon	34495560	34495882	.	-	.	ID=Cattle_Y_E01069;Parent=Cattle_Y_T00826;Dbxref=GeneID:112442075,GenBank:XM_059884178.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00826;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884178.1-6
haplotype2-0000357	CAT	exon	34497205	34497271	.	-	.	ID=Cattle_Y_E01070;Parent=Cattle_Y_T00826;Dbxref=GeneID:112442075,GenBank:XM_059884178.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00826;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884178.1-3
haplotype2-0000357	CAT	exon	34504108	34504215	.	-	.	ID=Cattle_Y_E01071;Parent=Cattle_Y_T00826;Dbxref=GeneID:112442075,GenBank:XM_059884178.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00826;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884178.1-2
haplotype2-0000357	CAT	exon	34504719	34504943	.	-	.	ID=Cattle_Y_E01072;Parent=Cattle_Y_T00826;Dbxref=GeneID:112442075,GenBank:XM_059884178.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00826;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884178.1-1
haplotype2-0000357	CAT	CDS	34492937	34493513	.	-	1	ID=Cattle_Y_C00851;Parent=Cattle_Y_T00826;gene_id=Cattle_Y_G00586;transcript_id=Cattle_Y_T00826;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34494675	34495280	.	-	1	ID=Cattle_Y_C00852;Parent=Cattle_Y_T00826;gene_id=Cattle_Y_G00586;transcript_id=Cattle_Y_T00826;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34495560	34495882	.	-	0	ID=Cattle_Y_C00853;Parent=Cattle_Y_T00826;gene_id=Cattle_Y_G00586;transcript_id=Cattle_Y_T00826;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34497205	34497240	.	-	0	ID=Cattle_Y_C00854;Parent=Cattle_Y_T00826;gene_id=Cattle_Y_G00586;transcript_id=Cattle_Y_T00826;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34492633	34504674	.	-	.	ID=Cattle_Y_T00827;Parent=Cattle_Y_G00586;Dbxref=GeneID:112442075,GenBank:XM_059884179.1;Name=XM_059884179.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 14 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X3;transcript_id=Cattle_Y_T00827;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884179.1
haplotype2-0000357	CAT	exon	34492633	34493513	.	-	.	ID=Cattle_Y_E01073;Parent=Cattle_Y_T00827;Dbxref=GeneID:112442075,GenBank:XM_059884179.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00827;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884179.1-6
haplotype2-0000357	CAT	exon	34494675	34495280	.	-	.	ID=Cattle_Y_E01074;Parent=Cattle_Y_T00827;Dbxref=GeneID:112442075,GenBank:XM_059884179.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00827;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884179.1-6
haplotype2-0000357	CAT	exon	34495560	34495882	.	-	.	ID=Cattle_Y_E01075;Parent=Cattle_Y_T00827;Dbxref=GeneID:112442075,GenBank:XM_059884179.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00827;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884179.1-6
haplotype2-0000357	CAT	exon	34497205	34497271	.	-	.	ID=Cattle_Y_E01076;Parent=Cattle_Y_T00827;Dbxref=GeneID:112442075,GenBank:XM_059884179.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00827;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884179.1-3
haplotype2-0000357	CAT	exon	34504108	34504215	.	-	.	ID=Cattle_Y_E01077;Parent=Cattle_Y_T00827;Dbxref=GeneID:112442075,GenBank:XM_059884179.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00827;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884179.1-2
haplotype2-0000357	CAT	exon	34504440	34504674	.	-	.	ID=Cattle_Y_E01078;Parent=Cattle_Y_T00827;Dbxref=GeneID:112442075,GenBank:XM_059884179.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00827;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884179.1-1
haplotype2-0000357	CAT	CDS	34492937	34493513	.	-	1	ID=Cattle_Y_C00855;Parent=Cattle_Y_T00827;gene_id=Cattle_Y_G00586;transcript_id=Cattle_Y_T00827;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34494675	34495280	.	-	1	ID=Cattle_Y_C00856;Parent=Cattle_Y_T00827;gene_id=Cattle_Y_G00586;transcript_id=Cattle_Y_T00827;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34495560	34495882	.	-	0	ID=Cattle_Y_C00857;Parent=Cattle_Y_T00827;gene_id=Cattle_Y_G00586;transcript_id=Cattle_Y_T00827;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34497205	34497240	.	-	0	ID=Cattle_Y_C00858;Parent=Cattle_Y_T00827;gene_id=Cattle_Y_G00586;transcript_id=Cattle_Y_T00827;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34492633	34504943	.	-	.	ID=Cattle_Y_T00828;Parent=Cattle_Y_G00586;Dbxref=GeneID:112442075,GenBank:XM_059884180.1;Name=XM_059884180.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 14 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X4;transcript_id=Cattle_Y_T00828;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884180.1
haplotype2-0000357	CAT	exon	34492633	34493513	.	-	.	ID=Cattle_Y_E01079;Parent=Cattle_Y_T00828;Dbxref=GeneID:112442075,GenBank:XM_059884180.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00828;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884180.1-7
haplotype2-0000357	CAT	exon	34494675	34495280	.	-	.	ID=Cattle_Y_E01080;Parent=Cattle_Y_T00828;Dbxref=GeneID:112442075,GenBank:XM_059884180.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00828;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884180.1-7
haplotype2-0000357	CAT	exon	34495560	34495882	.	-	.	ID=Cattle_Y_E01081;Parent=Cattle_Y_T00828;Dbxref=GeneID:112442075,GenBank:XM_059884180.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00828;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884180.1-7
haplotype2-0000357	CAT	exon	34497205	34497271	.	-	.	ID=Cattle_Y_E01082;Parent=Cattle_Y_T00828;Dbxref=GeneID:112442075,GenBank:XM_059884180.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00828;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884180.1-4
haplotype2-0000357	CAT	exon	34498661	34498891	.	-	.	ID=Cattle_Y_E01083;Parent=Cattle_Y_T00828;Dbxref=GeneID:112442075,GenBank:XM_059884180.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00828;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884180.1-3
haplotype2-0000357	CAT	exon	34504108	34504215	.	-	.	ID=Cattle_Y_E01084;Parent=Cattle_Y_T00828;Dbxref=GeneID:112442075,GenBank:XM_059884180.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00828;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884180.1-2
haplotype2-0000357	CAT	exon	34504756	34504943	.	-	.	ID=Cattle_Y_E01085;Parent=Cattle_Y_T00828;Dbxref=GeneID:112442075,GenBank:XM_059884180.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00828;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884180.1-1
haplotype2-0000357	CAT	CDS	34492937	34493513	.	-	1	ID=Cattle_Y_C00859;Parent=Cattle_Y_T00828;gene_id=Cattle_Y_G00586;transcript_id=Cattle_Y_T00828;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34494675	34495280	.	-	1	ID=Cattle_Y_C00860;Parent=Cattle_Y_T00828;gene_id=Cattle_Y_G00586;transcript_id=Cattle_Y_T00828;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34495560	34495882	.	-	0	ID=Cattle_Y_C00861;Parent=Cattle_Y_T00828;gene_id=Cattle_Y_G00586;transcript_id=Cattle_Y_T00828;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34497205	34497240	.	-	0	ID=Cattle_Y_C00862;Parent=Cattle_Y_T00828;gene_id=Cattle_Y_G00586;transcript_id=Cattle_Y_T00828;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34492633	34501647	.	-	.	ID=Cattle_Y_T00829;Parent=Cattle_Y_G00586;Dbxref=GeneID:112442075,GenBank:XM_059884181.1;Name=XM_059884181.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 14 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X5;transcript_id=Cattle_Y_T00829;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884181.1
haplotype2-0000357	CAT	exon	34492633	34493513	.	-	.	ID=Cattle_Y_E01086;Parent=Cattle_Y_T00829;Dbxref=GeneID:112442075,GenBank:XM_059884181.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00829;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884181.1-5
haplotype2-0000357	CAT	exon	34494675	34495280	.	-	.	ID=Cattle_Y_E01087;Parent=Cattle_Y_T00829;Dbxref=GeneID:112442075,GenBank:XM_059884181.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00829;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884181.1-5
haplotype2-0000357	CAT	exon	34495560	34495882	.	-	.	ID=Cattle_Y_E01088;Parent=Cattle_Y_T00829;Dbxref=GeneID:112442075,GenBank:XM_059884181.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00829;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884181.1-5
haplotype2-0000357	CAT	exon	34497205	34497271	.	-	.	ID=Cattle_Y_E01089;Parent=Cattle_Y_T00829;Dbxref=GeneID:112442075,GenBank:XM_059884181.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00829;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884181.1-2
haplotype2-0000357	CAT	exon	34498661	34501647	.	-	.	ID=Cattle_Y_E01090;Parent=Cattle_Y_T00829;Dbxref=GeneID:112442075,GenBank:XM_059884181.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00829;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884181.1-1
haplotype2-0000357	CAT	CDS	34492937	34493513	.	-	1	ID=Cattle_Y_C00863;Parent=Cattle_Y_T00829;gene_id=Cattle_Y_G00586;transcript_id=Cattle_Y_T00829;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34494675	34495280	.	-	1	ID=Cattle_Y_C00864;Parent=Cattle_Y_T00829;gene_id=Cattle_Y_G00586;transcript_id=Cattle_Y_T00829;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34495560	34495882	.	-	0	ID=Cattle_Y_C00865;Parent=Cattle_Y_T00829;gene_id=Cattle_Y_G00586;transcript_id=Cattle_Y_T00829;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34497205	34497240	.	-	0	ID=Cattle_Y_C00866;Parent=Cattle_Y_T00829;gene_id=Cattle_Y_G00586;transcript_id=Cattle_Y_T00829;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34492633	34504942	.	-	.	ID=Cattle_Y_T00830;Parent=Cattle_Y_G00586;Dbxref=GeneID:112442075,GenBank:XM_059884182.1;Name=XM_059884182.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 13 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X6;transcript_id=Cattle_Y_T00830;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884182.1
haplotype2-0000357	CAT	exon	34492633	34493513	.	-	.	ID=Cattle_Y_E01091;Parent=Cattle_Y_T00830;Dbxref=GeneID:112442075,GenBank:XM_059884182.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X6;transcript_id=Cattle_Y_T00830;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884182.1-5
haplotype2-0000357	CAT	exon	34494675	34495280	.	-	.	ID=Cattle_Y_E01092;Parent=Cattle_Y_T00830;Dbxref=GeneID:112442075,GenBank:XM_059884182.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X6;transcript_id=Cattle_Y_T00830;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884182.1-5
haplotype2-0000357	CAT	exon	34495560	34495882	.	-	.	ID=Cattle_Y_E01093;Parent=Cattle_Y_T00830;Dbxref=GeneID:112442075,GenBank:XM_059884182.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X6;transcript_id=Cattle_Y_T00830;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884182.1-3
haplotype2-0000357	CAT	exon	34504108	34504215	.	-	.	ID=Cattle_Y_E01094;Parent=Cattle_Y_T00830;Dbxref=GeneID:112442075,GenBank:XM_059884182.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X6;transcript_id=Cattle_Y_T00830;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884182.1-2
haplotype2-0000357	CAT	exon	34504756	34504942	.	-	.	ID=Cattle_Y_E01095;Parent=Cattle_Y_T00830;Dbxref=GeneID:112442075,GenBank:XM_059884182.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC112442075;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X6;transcript_id=Cattle_Y_T00830;gene_id=Cattle_Y_G00586;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884182.1-1
haplotype2-0000357	CAT	CDS	34492937	34493513	.	-	1	ID=Cattle_Y_C00867;Parent=Cattle_Y_T00830;gene_id=Cattle_Y_G00586;transcript_id=Cattle_Y_T00830;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34494675	34495280	.	-	1	ID=Cattle_Y_C00868;Parent=Cattle_Y_T00830;gene_id=Cattle_Y_G00586;transcript_id=Cattle_Y_T00830;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34495560	34495855	.	-	0	ID=Cattle_Y_C00869;Parent=Cattle_Y_T00830;gene_id=Cattle_Y_G00586;transcript_id=Cattle_Y_T00830;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	34513920	34517183	.	-	.	ID=Cattle_Y_G00587;Dbxref=GeneID:132344539;Name=LOC132344539;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC132344539;gene_biotype=protein_coding;gene_id=Cattle_Y_G00587;source_id=gene-LOC132344539
haplotype2-0000357	CAT	mRNA	34513920	34517183	.	-	.	ID=Cattle_Y_T00831;Parent=Cattle_Y_G00587;Dbxref=GeneID:132344539,GenBank:XM_059884227.1;Name=XM_059884227.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344539;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 2 Proteins%2C and 80%25 coverage of the annotated genomic feature by RNAseq alignments;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T00831;gene_id=Cattle_Y_G00587;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884227.1
haplotype2-0000357	CAT	exon	34513920	34514814	.	-	.	ID=Cattle_Y_E01096;Parent=Cattle_Y_T00831;Dbxref=GeneID:132344539,GenBank:XM_059884227.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344539;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T00831;gene_id=Cattle_Y_G00587;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884227.1-3
haplotype2-0000357	CAT	exon	34516198	34516567	.	-	.	ID=Cattle_Y_E01097;Parent=Cattle_Y_T00831;Dbxref=GeneID:132344539,GenBank:XM_059884227.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344539;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T00831;gene_id=Cattle_Y_G00587;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884227.1-3
haplotype2-0000357	CAT	exon	34516852	34517183	.	-	.	ID=Cattle_Y_E01098;Parent=Cattle_Y_T00831;Dbxref=GeneID:132344539,GenBank:XM_059884227.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344539;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T00831;gene_id=Cattle_Y_G00587;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884227.1-1
haplotype2-0000357	CAT	CDS	34514224	34514814	.	-	0	ID=Cattle_Y_C00870;Parent=Cattle_Y_T00831;gene_id=Cattle_Y_G00587;transcript_id=Cattle_Y_T00831;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34516198	34516567	.	-	1	ID=Cattle_Y_C00871;Parent=Cattle_Y_T00831;gene_id=Cattle_Y_G00587;transcript_id=Cattle_Y_T00831;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34516852	34517147	.	-	0	ID=Cattle_Y_C00872;Parent=Cattle_Y_T00831;gene_id=Cattle_Y_G00587;transcript_id=Cattle_Y_T00831;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	34520643	34523152	.	+	.	ID=Cattle_Y_G00588;Dbxref=GeneID:132344538;Name=LOC132344538;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC132344538;gene_biotype=protein_coding;gene_id=Cattle_Y_G00588;source_id=gene-LOC132344538
haplotype2-0000357	CAT	mRNA	34520643	34523152	.	+	.	ID=Cattle_Y_T00832;Parent=Cattle_Y_G00588;Dbxref=GeneID:132344538,GenBank:XM_059884226.1;Name=XM_059884226.1;gbkey=mRNA;gene=LOC132344538;model_evidence=Supporting evidence includes similarity to: 2 Proteins%2C and 92%25 coverage of the annotated genomic feature by RNAseq alignments;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T00832;gene_id=Cattle_Y_G00588;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884226.1
haplotype2-0000357	CAT	exon	34520643	34520974	.	+	.	ID=Cattle_Y_E01099;Parent=Cattle_Y_T00832;Dbxref=GeneID:132344538,GenBank:XM_059884226.1;gbkey=mRNA;gene=LOC132344538;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T00832;gene_id=Cattle_Y_G00588;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884226.1-1
haplotype2-0000357	CAT	exon	34521255	34521624	.	+	.	ID=Cattle_Y_E01100;Parent=Cattle_Y_T00832;Dbxref=GeneID:132344538,GenBank:XM_059884226.1;gbkey=mRNA;gene=LOC132344538;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T00832;gene_id=Cattle_Y_G00588;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884226.1-1
haplotype2-0000357	CAT	exon	34522309	34523152	.	+	.	ID=Cattle_Y_E01101;Parent=Cattle_Y_T00832;Dbxref=GeneID:132344538,GenBank:XM_059884226.1;gbkey=mRNA;gene=LOC132344538;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T00832;gene_id=Cattle_Y_G00588;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884226.1-3
haplotype2-0000357	CAT	CDS	34520679	34520974	.	+	0	ID=Cattle_Y_C00873;Parent=Cattle_Y_T00832;gene_id=Cattle_Y_G00588;transcript_id=Cattle_Y_T00832;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34521255	34521624	.	+	1	ID=Cattle_Y_C00874;Parent=Cattle_Y_T00832;gene_id=Cattle_Y_G00588;transcript_id=Cattle_Y_T00832;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34522309	34522899	.	+	0	ID=Cattle_Y_C00875;Parent=Cattle_Y_T00832;gene_id=Cattle_Y_G00588;transcript_id=Cattle_Y_T00832;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	34532287	34544532	.	+	.	ID=Cattle_Y_G00589;Dbxref=GeneID:132344523;Name=LOC132344523;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC132344523;gene_biotype=protein_coding;gene_id=Cattle_Y_G00589;source_id=gene-LOC132344523
haplotype2-0000357	CAT	mRNA	34532290	34544532	.	+	.	ID=Cattle_Y_T00833;Parent=Cattle_Y_G00589;Dbxref=GeneID:132344523,GenBank:XM_059884194.1;Name=XM_059884194.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;model_evidence=Supporting evidence includes similarity to: 11 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X1;transcript_id=Cattle_Y_T00833;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884194.1
haplotype2-0000357	CAT	exon	34532290	34532399	.	+	.	ID=Cattle_Y_E01102;Parent=Cattle_Y_T00833;Dbxref=GeneID:132344523,GenBank:XM_059884194.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00833;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884194.1-1
haplotype2-0000357	CAT	exon	34532941	34533048	.	+	.	ID=Cattle_Y_E01103;Parent=Cattle_Y_T00833;Dbxref=GeneID:132344523,GenBank:XM_059884194.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00833;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884194.1-2
haplotype2-0000357	CAT	exon	34539894	34539960	.	+	.	ID=Cattle_Y_E01104;Parent=Cattle_Y_T00833;Dbxref=GeneID:132344523,GenBank:XM_059884194.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00833;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884194.1-3
haplotype2-0000357	CAT	exon	34541283	34541605	.	+	.	ID=Cattle_Y_E01105;Parent=Cattle_Y_T00833;Dbxref=GeneID:132344523,GenBank:XM_059884194.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00833;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884194.1-1
haplotype2-0000357	CAT	exon	34541885	34542490	.	+	.	ID=Cattle_Y_E01106;Parent=Cattle_Y_T00833;Dbxref=GeneID:132344523,GenBank:XM_059884194.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00833;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884194.1-1
haplotype2-0000357	CAT	exon	34543652	34544532	.	+	.	ID=Cattle_Y_E01107;Parent=Cattle_Y_T00833;Dbxref=GeneID:132344523,GenBank:XM_059884194.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00833;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884194.1-6
haplotype2-0000357	CAT	CDS	34539925	34539960	.	+	0	ID=Cattle_Y_C00876;Parent=Cattle_Y_T00833;gene_id=Cattle_Y_G00589;transcript_id=Cattle_Y_T00833;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34541283	34541605	.	+	0	ID=Cattle_Y_C00877;Parent=Cattle_Y_T00833;gene_id=Cattle_Y_G00589;transcript_id=Cattle_Y_T00833;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34541885	34542490	.	+	1	ID=Cattle_Y_C00878;Parent=Cattle_Y_T00833;gene_id=Cattle_Y_G00589;transcript_id=Cattle_Y_T00833;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34543652	34544228	.	+	1	ID=Cattle_Y_C00879;Parent=Cattle_Y_T00833;gene_id=Cattle_Y_G00589;transcript_id=Cattle_Y_T00833;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34532290	34544532	.	+	.	ID=Cattle_Y_T00834;Parent=Cattle_Y_G00589;Dbxref=GeneID:132344523,GenBank:XM_059884195.1;Name=XM_059884195.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;model_evidence=Supporting evidence includes similarity to: 11 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X2;transcript_id=Cattle_Y_T00834;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884195.1
haplotype2-0000357	CAT	exon	34532290	34532436	.	+	.	ID=Cattle_Y_E01108;Parent=Cattle_Y_T00834;Dbxref=GeneID:132344523,GenBank:XM_059884195.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00834;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884195.1-1
haplotype2-0000357	CAT	exon	34532941	34533048	.	+	.	ID=Cattle_Y_E01109;Parent=Cattle_Y_T00834;Dbxref=GeneID:132344523,GenBank:XM_059884195.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00834;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884195.1-2
haplotype2-0000357	CAT	exon	34539894	34539960	.	+	.	ID=Cattle_Y_E01110;Parent=Cattle_Y_T00834;Dbxref=GeneID:132344523,GenBank:XM_059884195.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00834;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884195.1-3
haplotype2-0000357	CAT	exon	34541283	34541605	.	+	.	ID=Cattle_Y_E01111;Parent=Cattle_Y_T00834;Dbxref=GeneID:132344523,GenBank:XM_059884195.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00834;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884195.1-1
haplotype2-0000357	CAT	exon	34541885	34542490	.	+	.	ID=Cattle_Y_E01112;Parent=Cattle_Y_T00834;Dbxref=GeneID:132344523,GenBank:XM_059884195.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00834;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884195.1-1
haplotype2-0000357	CAT	exon	34543652	34544532	.	+	.	ID=Cattle_Y_E01113;Parent=Cattle_Y_T00834;Dbxref=GeneID:132344523,GenBank:XM_059884195.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00834;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884195.1-6
haplotype2-0000357	CAT	CDS	34539925	34539960	.	+	0	ID=Cattle_Y_C00880;Parent=Cattle_Y_T00834;gene_id=Cattle_Y_G00589;transcript_id=Cattle_Y_T00834;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34541283	34541605	.	+	0	ID=Cattle_Y_C00881;Parent=Cattle_Y_T00834;gene_id=Cattle_Y_G00589;transcript_id=Cattle_Y_T00834;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34541885	34542490	.	+	1	ID=Cattle_Y_C00882;Parent=Cattle_Y_T00834;gene_id=Cattle_Y_G00589;transcript_id=Cattle_Y_T00834;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34543652	34544228	.	+	1	ID=Cattle_Y_C00883;Parent=Cattle_Y_T00834;gene_id=Cattle_Y_G00589;transcript_id=Cattle_Y_T00834;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34532482	34544532	.	+	.	ID=Cattle_Y_T00835;Parent=Cattle_Y_G00589;Dbxref=GeneID:132344523,GenBank:XM_059884196.1;Name=XM_059884196.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;model_evidence=Supporting evidence includes similarity to: 11 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X3;transcript_id=Cattle_Y_T00835;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884196.1
haplotype2-0000357	CAT	exon	34532482	34532716	.	+	.	ID=Cattle_Y_E01114;Parent=Cattle_Y_T00835;Dbxref=GeneID:132344523,GenBank:XM_059884196.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00835;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884196.1-1
haplotype2-0000357	CAT	exon	34532941	34533048	.	+	.	ID=Cattle_Y_E01115;Parent=Cattle_Y_T00835;Dbxref=GeneID:132344523,GenBank:XM_059884196.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00835;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884196.1-2
haplotype2-0000357	CAT	exon	34539894	34539960	.	+	.	ID=Cattle_Y_E01116;Parent=Cattle_Y_T00835;Dbxref=GeneID:132344523,GenBank:XM_059884196.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00835;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884196.1-3
haplotype2-0000357	CAT	exon	34541283	34541605	.	+	.	ID=Cattle_Y_E01117;Parent=Cattle_Y_T00835;Dbxref=GeneID:132344523,GenBank:XM_059884196.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00835;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884196.1-1
haplotype2-0000357	CAT	exon	34541885	34542490	.	+	.	ID=Cattle_Y_E01118;Parent=Cattle_Y_T00835;Dbxref=GeneID:132344523,GenBank:XM_059884196.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00835;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884196.1-1
haplotype2-0000357	CAT	exon	34543652	34544532	.	+	.	ID=Cattle_Y_E01119;Parent=Cattle_Y_T00835;Dbxref=GeneID:132344523,GenBank:XM_059884196.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00835;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884196.1-6
haplotype2-0000357	CAT	CDS	34539925	34539960	.	+	0	ID=Cattle_Y_C00884;Parent=Cattle_Y_T00835;gene_id=Cattle_Y_G00589;transcript_id=Cattle_Y_T00835;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34541283	34541605	.	+	0	ID=Cattle_Y_C00885;Parent=Cattle_Y_T00835;gene_id=Cattle_Y_G00589;transcript_id=Cattle_Y_T00835;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34541885	34542490	.	+	1	ID=Cattle_Y_C00886;Parent=Cattle_Y_T00835;gene_id=Cattle_Y_G00589;transcript_id=Cattle_Y_T00835;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34543652	34544228	.	+	1	ID=Cattle_Y_C00887;Parent=Cattle_Y_T00835;gene_id=Cattle_Y_G00589;transcript_id=Cattle_Y_T00835;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34532287	34544532	.	+	.	ID=Cattle_Y_T00836;Parent=Cattle_Y_G00589;Dbxref=GeneID:132344523,GenBank:XM_059884198.1;Name=XM_059884198.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;model_evidence=Supporting evidence includes similarity to: 11 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X4;transcript_id=Cattle_Y_T00836;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884198.1
haplotype2-0000357	CAT	exon	34532287	34532399	.	+	.	ID=Cattle_Y_E01120;Parent=Cattle_Y_T00836;Dbxref=GeneID:132344523,GenBank:XM_059884198.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00836;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884198.1-1
haplotype2-0000357	CAT	exon	34532941	34533048	.	+	.	ID=Cattle_Y_E01121;Parent=Cattle_Y_T00836;Dbxref=GeneID:132344523,GenBank:XM_059884198.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00836;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884198.1-2
haplotype2-0000357	CAT	exon	34538274	34538504	.	+	.	ID=Cattle_Y_E01122;Parent=Cattle_Y_T00836;Dbxref=GeneID:132344523,GenBank:XM_059884198.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00836;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884198.1-3
haplotype2-0000357	CAT	exon	34539894	34539960	.	+	.	ID=Cattle_Y_E01123;Parent=Cattle_Y_T00836;Dbxref=GeneID:132344523,GenBank:XM_059884198.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00836;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884198.1-4
haplotype2-0000357	CAT	exon	34541283	34541605	.	+	.	ID=Cattle_Y_E01124;Parent=Cattle_Y_T00836;Dbxref=GeneID:132344523,GenBank:XM_059884198.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00836;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884198.1-1
haplotype2-0000357	CAT	exon	34541885	34542490	.	+	.	ID=Cattle_Y_E01125;Parent=Cattle_Y_T00836;Dbxref=GeneID:132344523,GenBank:XM_059884198.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00836;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884198.1-1
haplotype2-0000357	CAT	exon	34543652	34544532	.	+	.	ID=Cattle_Y_E01126;Parent=Cattle_Y_T00836;Dbxref=GeneID:132344523,GenBank:XM_059884198.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00836;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884198.1-7
haplotype2-0000357	CAT	CDS	34539925	34539960	.	+	0	ID=Cattle_Y_C00888;Parent=Cattle_Y_T00836;gene_id=Cattle_Y_G00589;transcript_id=Cattle_Y_T00836;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34541283	34541605	.	+	0	ID=Cattle_Y_C00889;Parent=Cattle_Y_T00836;gene_id=Cattle_Y_G00589;transcript_id=Cattle_Y_T00836;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34541885	34542490	.	+	1	ID=Cattle_Y_C00890;Parent=Cattle_Y_T00836;gene_id=Cattle_Y_G00589;transcript_id=Cattle_Y_T00836;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34543652	34544228	.	+	1	ID=Cattle_Y_C00891;Parent=Cattle_Y_T00836;gene_id=Cattle_Y_G00589;transcript_id=Cattle_Y_T00836;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34532290	34544532	.	+	.	ID=Cattle_Y_T00837;Parent=Cattle_Y_G00589;Dbxref=GeneID:132344523,GenBank:XM_059884199.1;Name=XM_059884199.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;model_evidence=Supporting evidence includes similarity to: 10 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X5;transcript_id=Cattle_Y_T00837;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884199.1
haplotype2-0000357	CAT	exon	34532290	34532399	.	+	.	ID=Cattle_Y_E01127;Parent=Cattle_Y_T00837;Dbxref=GeneID:132344523,GenBank:XM_059884199.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00837;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884199.1-1
haplotype2-0000357	CAT	exon	34532941	34533048	.	+	.	ID=Cattle_Y_E01128;Parent=Cattle_Y_T00837;Dbxref=GeneID:132344523,GenBank:XM_059884199.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00837;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884199.1-2
haplotype2-0000357	CAT	exon	34541283	34541605	.	+	.	ID=Cattle_Y_E01129;Parent=Cattle_Y_T00837;Dbxref=GeneID:132344523,GenBank:XM_059884199.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00837;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884199.1-3
haplotype2-0000357	CAT	exon	34541885	34542490	.	+	.	ID=Cattle_Y_E01130;Parent=Cattle_Y_T00837;Dbxref=GeneID:132344523,GenBank:XM_059884199.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00837;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884199.1-1
haplotype2-0000357	CAT	exon	34543652	34544532	.	+	.	ID=Cattle_Y_E01131;Parent=Cattle_Y_T00837;Dbxref=GeneID:132344523,GenBank:XM_059884199.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344523;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00837;gene_id=Cattle_Y_G00589;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884199.1-5
haplotype2-0000357	CAT	CDS	34541310	34541605	.	+	0	ID=Cattle_Y_C00892;Parent=Cattle_Y_T00837;gene_id=Cattle_Y_G00589;transcript_id=Cattle_Y_T00837;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34541885	34542490	.	+	1	ID=Cattle_Y_C00893;Parent=Cattle_Y_T00837;gene_id=Cattle_Y_G00589;transcript_id=Cattle_Y_T00837;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34543652	34544228	.	+	1	ID=Cattle_Y_C00894;Parent=Cattle_Y_T00837;gene_id=Cattle_Y_G00589;transcript_id=Cattle_Y_T00837;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	34559185	34565834	.	+	.	ID=Cattle_Y_G00590;Dbxref=GeneID:132344522;Name=LOC132344522;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC132344522;gene_biotype=protein_coding;gene_id=Cattle_Y_G00590;source_id=gene-LOC132344522
haplotype2-0000357	CAT	mRNA	34560440	34565834	.	+	.	ID=Cattle_Y_T00838;Parent=Cattle_Y_G00590;Dbxref=GeneID:132344522,GenBank:XM_059884190.1;Name=XM_059884190.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344522;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 11 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X1;transcript_id=Cattle_Y_T00838;gene_id=Cattle_Y_G00590;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884190.1
haplotype2-0000357	CAT	exon	34560440	34561261	.	+	.	ID=Cattle_Y_E01132;Parent=Cattle_Y_T00838;Dbxref=GeneID:132344522,GenBank:XM_059884190.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344522;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00838;gene_id=Cattle_Y_G00590;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884190.1-1
haplotype2-0000357	CAT	exon	34562584	34562906	.	+	.	ID=Cattle_Y_E01133;Parent=Cattle_Y_T00838;Dbxref=GeneID:132344522,GenBank:XM_059884190.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344522;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00838;gene_id=Cattle_Y_G00590;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884190.1-2
haplotype2-0000357	CAT	exon	34563187	34563792	.	+	.	ID=Cattle_Y_E01134;Parent=Cattle_Y_T00838;Dbxref=GeneID:132344522,GenBank:XM_059884190.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344522;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00838;gene_id=Cattle_Y_G00590;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884190.1-3
haplotype2-0000357	CAT	exon	34564954	34565834	.	+	.	ID=Cattle_Y_E01135;Parent=Cattle_Y_T00838;Dbxref=GeneID:132344522,GenBank:XM_059884190.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344522;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00838;gene_id=Cattle_Y_G00590;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884190.1-4
haplotype2-0000357	CAT	CDS	34561112	34561261	.	+	0	ID=Cattle_Y_C00895;Parent=Cattle_Y_T00838;Dbxref=GeneID:132344522,GenBank:XP_059740173.1;Name=XP_059740173.1;gbkey=CDS;gene=LOC132344522;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740173.1;gene_id=Cattle_Y_G00590;transcript_id=Cattle_Y_T00838;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34562584	34562906	.	+	0	ID=Cattle_Y_C00896;Parent=Cattle_Y_T00838;Dbxref=GeneID:132344522,GenBank:XP_059740173.1;Name=XP_059740173.1;gbkey=CDS;gene=LOC132344522;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740173.1;gene_id=Cattle_Y_G00590;transcript_id=Cattle_Y_T00838;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34563187	34563792	.	+	1	ID=Cattle_Y_C00897;Parent=Cattle_Y_T00838;Dbxref=GeneID:132344522,GenBank:XP_059740173.1;Name=XP_059740173.1;gbkey=CDS;gene=LOC132344522;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740173.1;gene_id=Cattle_Y_G00590;transcript_id=Cattle_Y_T00838;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34564954	34565530	.	+	1	ID=Cattle_Y_C00898;Parent=Cattle_Y_T00838;Dbxref=GeneID:132344522,GenBank:XP_059740173.1;Name=XP_059740173.1;gbkey=CDS;gene=LOC132344522;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740173.1;gene_id=Cattle_Y_G00590;transcript_id=Cattle_Y_T00838;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34559185	34565834	.	+	.	ID=Cattle_Y_T00839;Parent=Cattle_Y_G00590;Dbxref=GeneID:132344522,GenBank:XM_059884191.1;Name=XM_059884191.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344522;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 11 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X2;transcript_id=Cattle_Y_T00839;gene_id=Cattle_Y_G00590;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884191.1
haplotype2-0000357	CAT	exon	34559185	34559805	.	+	.	ID=Cattle_Y_E01136;Parent=Cattle_Y_T00839;Dbxref=GeneID:132344522,GenBank:XM_059884191.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344522;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00839;gene_id=Cattle_Y_G00590;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884191.1-1
haplotype2-0000357	CAT	exon	34561195	34561261	.	+	.	ID=Cattle_Y_E01137;Parent=Cattle_Y_T00839;Dbxref=GeneID:132344522,GenBank:XM_059884191.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344522;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00839;gene_id=Cattle_Y_G00590;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884191.1-2
haplotype2-0000357	CAT	exon	34562584	34562906	.	+	.	ID=Cattle_Y_E01138;Parent=Cattle_Y_T00839;Dbxref=GeneID:132344522,GenBank:XM_059884191.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344522;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00839;gene_id=Cattle_Y_G00590;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884191.1-3
haplotype2-0000357	CAT	exon	34563187	34563792	.	+	.	ID=Cattle_Y_E01139;Parent=Cattle_Y_T00839;Dbxref=GeneID:132344522,GenBank:XM_059884191.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344522;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00839;gene_id=Cattle_Y_G00590;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884191.1-4
haplotype2-0000357	CAT	exon	34564954	34565834	.	+	.	ID=Cattle_Y_E01140;Parent=Cattle_Y_T00839;Dbxref=GeneID:132344522,GenBank:XM_059884191.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344522;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00839;gene_id=Cattle_Y_G00590;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884191.1-5
haplotype2-0000357	CAT	CDS	34561226	34561261	.	+	0	ID=Cattle_Y_C00899;Parent=Cattle_Y_T00839;Dbxref=GeneID:132344522,GenBank:XP_059740174.1;Name=XP_059740174.1;gbkey=CDS;gene=LOC132344522;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740174.1;gene_id=Cattle_Y_G00590;transcript_id=Cattle_Y_T00839;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34562584	34562906	.	+	0	ID=Cattle_Y_C00900;Parent=Cattle_Y_T00839;Dbxref=GeneID:132344522,GenBank:XP_059740174.1;Name=XP_059740174.1;gbkey=CDS;gene=LOC132344522;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740174.1;gene_id=Cattle_Y_G00590;transcript_id=Cattle_Y_T00839;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34563187	34563792	.	+	1	ID=Cattle_Y_C00901;Parent=Cattle_Y_T00839;Dbxref=GeneID:132344522,GenBank:XP_059740174.1;Name=XP_059740174.1;gbkey=CDS;gene=LOC132344522;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740174.1;gene_id=Cattle_Y_G00590;transcript_id=Cattle_Y_T00839;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34564954	34565530	.	+	1	ID=Cattle_Y_C00902;Parent=Cattle_Y_T00839;Dbxref=GeneID:132344522,GenBank:XP_059740174.1;Name=XP_059740174.1;gbkey=CDS;gene=LOC132344522;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740174.1;gene_id=Cattle_Y_G00590;transcript_id=Cattle_Y_T00839;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	34574831	34587144	.	+	.	ID=Cattle_Y_G00591;Dbxref=GeneID:132344521;Name=LOC132344521;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC132344521;gene_biotype=protein_coding;gene_id=Cattle_Y_G00591;source_id=gene-LOC132344521
haplotype2-0000357	CAT	mRNA	34574832	34587144	.	+	.	ID=Cattle_Y_T00840;Parent=Cattle_Y_G00591;Dbxref=GeneID:132344521,GenBank:XM_059884183.1;Name=XM_059884183.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 13 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X1;transcript_id=Cattle_Y_T00840;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884183.1
haplotype2-0000357	CAT	exon	34574832	34575015	.	+	.	ID=Cattle_Y_E01141;Parent=Cattle_Y_T00840;Dbxref=GeneID:132344521,GenBank:XM_059884183.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00840;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884183.1-1
haplotype2-0000357	CAT	exon	34575557	34575664	.	+	.	ID=Cattle_Y_E01142;Parent=Cattle_Y_T00840;Dbxref=GeneID:132344521,GenBank:XM_059884183.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00840;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884183.1-2
haplotype2-0000357	CAT	exon	34582505	34582571	.	+	.	ID=Cattle_Y_E01143;Parent=Cattle_Y_T00840;Dbxref=GeneID:132344521,GenBank:XM_059884183.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00840;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884183.1-3
haplotype2-0000357	CAT	exon	34583894	34584216	.	+	.	ID=Cattle_Y_E01144;Parent=Cattle_Y_T00840;Dbxref=GeneID:132344521,GenBank:XM_059884183.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00840;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884183.1-1
haplotype2-0000357	CAT	exon	34584497	34585102	.	+	.	ID=Cattle_Y_E01145;Parent=Cattle_Y_T00840;Dbxref=GeneID:132344521,GenBank:XM_059884183.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00840;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884183.1-1
haplotype2-0000357	CAT	exon	34586264	34587144	.	+	.	ID=Cattle_Y_E01146;Parent=Cattle_Y_T00840;Dbxref=GeneID:132344521,GenBank:XM_059884183.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00840;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884183.1-6
haplotype2-0000357	CAT	CDS	34582536	34582571	.	+	0	ID=Cattle_Y_C00903;Parent=Cattle_Y_T00840;gene_id=Cattle_Y_G00591;transcript_id=Cattle_Y_T00840;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34583894	34584216	.	+	0	ID=Cattle_Y_C00904;Parent=Cattle_Y_T00840;gene_id=Cattle_Y_G00591;transcript_id=Cattle_Y_T00840;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34584497	34585102	.	+	1	ID=Cattle_Y_C00905;Parent=Cattle_Y_T00840;gene_id=Cattle_Y_G00591;transcript_id=Cattle_Y_T00840;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34586264	34586840	.	+	1	ID=Cattle_Y_C00906;Parent=Cattle_Y_T00840;gene_id=Cattle_Y_G00591;transcript_id=Cattle_Y_T00840;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34574832	34587144	.	+	.	ID=Cattle_Y_T00841;Parent=Cattle_Y_G00591;Dbxref=GeneID:132344521,GenBank:XM_059884184.1;Name=XM_059884184.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 13 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X2;transcript_id=Cattle_Y_T00841;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884184.1
haplotype2-0000357	CAT	exon	34574832	34575052	.	+	.	ID=Cattle_Y_E01147;Parent=Cattle_Y_T00841;Dbxref=GeneID:132344521,GenBank:XM_059884184.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00841;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884184.1-1
haplotype2-0000357	CAT	exon	34575557	34575664	.	+	.	ID=Cattle_Y_E01148;Parent=Cattle_Y_T00841;Dbxref=GeneID:132344521,GenBank:XM_059884184.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00841;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884184.1-2
haplotype2-0000357	CAT	exon	34582505	34582571	.	+	.	ID=Cattle_Y_E01149;Parent=Cattle_Y_T00841;Dbxref=GeneID:132344521,GenBank:XM_059884184.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00841;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884184.1-3
haplotype2-0000357	CAT	exon	34583894	34584216	.	+	.	ID=Cattle_Y_E01150;Parent=Cattle_Y_T00841;Dbxref=GeneID:132344521,GenBank:XM_059884184.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00841;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884184.1-1
haplotype2-0000357	CAT	exon	34584497	34585102	.	+	.	ID=Cattle_Y_E01151;Parent=Cattle_Y_T00841;Dbxref=GeneID:132344521,GenBank:XM_059884184.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00841;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884184.1-1
haplotype2-0000357	CAT	exon	34586264	34587144	.	+	.	ID=Cattle_Y_E01152;Parent=Cattle_Y_T00841;Dbxref=GeneID:132344521,GenBank:XM_059884184.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00841;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884184.1-6
haplotype2-0000357	CAT	CDS	34582536	34582571	.	+	0	ID=Cattle_Y_C00907;Parent=Cattle_Y_T00841;gene_id=Cattle_Y_G00591;transcript_id=Cattle_Y_T00841;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34583894	34584216	.	+	0	ID=Cattle_Y_C00908;Parent=Cattle_Y_T00841;gene_id=Cattle_Y_G00591;transcript_id=Cattle_Y_T00841;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34584497	34585102	.	+	1	ID=Cattle_Y_C00909;Parent=Cattle_Y_T00841;gene_id=Cattle_Y_G00591;transcript_id=Cattle_Y_T00841;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34586264	34586840	.	+	1	ID=Cattle_Y_C00910;Parent=Cattle_Y_T00841;gene_id=Cattle_Y_G00591;transcript_id=Cattle_Y_T00841;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34575097	34587144	.	+	.	ID=Cattle_Y_T00842;Parent=Cattle_Y_G00591;Dbxref=GeneID:132344521,GenBank:XM_059884185.1;Name=XM_059884185.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 13 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X3;transcript_id=Cattle_Y_T00842;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884185.1
haplotype2-0000357	CAT	exon	34575097	34575332	.	+	.	ID=Cattle_Y_E01153;Parent=Cattle_Y_T00842;Dbxref=GeneID:132344521,GenBank:XM_059884185.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00842;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884185.1-1
haplotype2-0000357	CAT	exon	34575557	34575664	.	+	.	ID=Cattle_Y_E01154;Parent=Cattle_Y_T00842;Dbxref=GeneID:132344521,GenBank:XM_059884185.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00842;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884185.1-2
haplotype2-0000357	CAT	exon	34582505	34582571	.	+	.	ID=Cattle_Y_E01155;Parent=Cattle_Y_T00842;Dbxref=GeneID:132344521,GenBank:XM_059884185.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00842;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884185.1-3
haplotype2-0000357	CAT	exon	34583894	34584216	.	+	.	ID=Cattle_Y_E01156;Parent=Cattle_Y_T00842;Dbxref=GeneID:132344521,GenBank:XM_059884185.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00842;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884185.1-1
haplotype2-0000357	CAT	exon	34584497	34585102	.	+	.	ID=Cattle_Y_E01157;Parent=Cattle_Y_T00842;Dbxref=GeneID:132344521,GenBank:XM_059884185.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00842;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884185.1-1
haplotype2-0000357	CAT	exon	34586264	34587144	.	+	.	ID=Cattle_Y_E01158;Parent=Cattle_Y_T00842;Dbxref=GeneID:132344521,GenBank:XM_059884185.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00842;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884185.1-6
haplotype2-0000357	CAT	CDS	34582536	34582571	.	+	0	ID=Cattle_Y_C00911;Parent=Cattle_Y_T00842;gene_id=Cattle_Y_G00591;transcript_id=Cattle_Y_T00842;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34583894	34584216	.	+	0	ID=Cattle_Y_C00912;Parent=Cattle_Y_T00842;gene_id=Cattle_Y_G00591;transcript_id=Cattle_Y_T00842;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34584497	34585102	.	+	1	ID=Cattle_Y_C00913;Parent=Cattle_Y_T00842;gene_id=Cattle_Y_G00591;transcript_id=Cattle_Y_T00842;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34586264	34586840	.	+	1	ID=Cattle_Y_C00914;Parent=Cattle_Y_T00842;gene_id=Cattle_Y_G00591;transcript_id=Cattle_Y_T00842;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34574831	34587144	.	+	.	ID=Cattle_Y_T00843;Parent=Cattle_Y_G00591;Dbxref=GeneID:132344521,GenBank:XM_059884186.1;Name=XM_059884186.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 13 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X4;transcript_id=Cattle_Y_T00843;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884186.1
haplotype2-0000357	CAT	exon	34574831	34575015	.	+	.	ID=Cattle_Y_E01159;Parent=Cattle_Y_T00843;Dbxref=GeneID:132344521,GenBank:XM_059884186.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00843;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884186.1-1
haplotype2-0000357	CAT	exon	34575557	34575664	.	+	.	ID=Cattle_Y_E01160;Parent=Cattle_Y_T00843;Dbxref=GeneID:132344521,GenBank:XM_059884186.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00843;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884186.1-2
haplotype2-0000357	CAT	exon	34580885	34581115	.	+	.	ID=Cattle_Y_E01161;Parent=Cattle_Y_T00843;Dbxref=GeneID:132344521,GenBank:XM_059884186.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00843;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884186.1-3
haplotype2-0000357	CAT	exon	34582505	34582571	.	+	.	ID=Cattle_Y_E01162;Parent=Cattle_Y_T00843;Dbxref=GeneID:132344521,GenBank:XM_059884186.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00843;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884186.1-4
haplotype2-0000357	CAT	exon	34583894	34584216	.	+	.	ID=Cattle_Y_E01163;Parent=Cattle_Y_T00843;Dbxref=GeneID:132344521,GenBank:XM_059884186.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00843;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884186.1-1
haplotype2-0000357	CAT	exon	34584497	34585102	.	+	.	ID=Cattle_Y_E01164;Parent=Cattle_Y_T00843;Dbxref=GeneID:132344521,GenBank:XM_059884186.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00843;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884186.1-1
haplotype2-0000357	CAT	exon	34586264	34587144	.	+	.	ID=Cattle_Y_E01165;Parent=Cattle_Y_T00843;Dbxref=GeneID:132344521,GenBank:XM_059884186.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00843;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884186.1-7
haplotype2-0000357	CAT	CDS	34582536	34582571	.	+	0	ID=Cattle_Y_C00915;Parent=Cattle_Y_T00843;gene_id=Cattle_Y_G00591;transcript_id=Cattle_Y_T00843;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34583894	34584216	.	+	0	ID=Cattle_Y_C00916;Parent=Cattle_Y_T00843;gene_id=Cattle_Y_G00591;transcript_id=Cattle_Y_T00843;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34584497	34585102	.	+	1	ID=Cattle_Y_C00917;Parent=Cattle_Y_T00843;gene_id=Cattle_Y_G00591;transcript_id=Cattle_Y_T00843;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34586264	34586840	.	+	1	ID=Cattle_Y_C00918;Parent=Cattle_Y_T00843;gene_id=Cattle_Y_G00591;transcript_id=Cattle_Y_T00843;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34578124	34587144	.	+	.	ID=Cattle_Y_T00844;Parent=Cattle_Y_G00591;Dbxref=GeneID:132344521,GenBank:XM_059884187.1;Name=XM_059884187.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 13 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X5;transcript_id=Cattle_Y_T00844;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884187.1
haplotype2-0000357	CAT	exon	34578124	34581115	.	+	.	ID=Cattle_Y_E01166;Parent=Cattle_Y_T00844;Dbxref=GeneID:132344521,GenBank:XM_059884187.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00844;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884187.1-1
haplotype2-0000357	CAT	exon	34582505	34582571	.	+	.	ID=Cattle_Y_E01167;Parent=Cattle_Y_T00844;Dbxref=GeneID:132344521,GenBank:XM_059884187.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00844;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884187.1-2
haplotype2-0000357	CAT	exon	34583894	34584216	.	+	.	ID=Cattle_Y_E01168;Parent=Cattle_Y_T00844;Dbxref=GeneID:132344521,GenBank:XM_059884187.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00844;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884187.1-1
haplotype2-0000357	CAT	exon	34584497	34585102	.	+	.	ID=Cattle_Y_E01169;Parent=Cattle_Y_T00844;Dbxref=GeneID:132344521,GenBank:XM_059884187.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00844;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884187.1-1
haplotype2-0000357	CAT	exon	34586264	34587144	.	+	.	ID=Cattle_Y_E01170;Parent=Cattle_Y_T00844;Dbxref=GeneID:132344521,GenBank:XM_059884187.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00844;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884187.1-5
haplotype2-0000357	CAT	CDS	34582536	34582571	.	+	0	ID=Cattle_Y_C00919;Parent=Cattle_Y_T00844;gene_id=Cattle_Y_G00591;transcript_id=Cattle_Y_T00844;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34583894	34584216	.	+	0	ID=Cattle_Y_C00920;Parent=Cattle_Y_T00844;gene_id=Cattle_Y_G00591;transcript_id=Cattle_Y_T00844;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34584497	34585102	.	+	1	ID=Cattle_Y_C00921;Parent=Cattle_Y_T00844;gene_id=Cattle_Y_G00591;transcript_id=Cattle_Y_T00844;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34586264	34586840	.	+	1	ID=Cattle_Y_C00922;Parent=Cattle_Y_T00844;gene_id=Cattle_Y_G00591;transcript_id=Cattle_Y_T00844;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34574833	34587144	.	+	.	ID=Cattle_Y_T00845;Parent=Cattle_Y_G00591;Dbxref=GeneID:132344521,GenBank:XM_059884189.1;Name=XM_059884189.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 12 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X6;transcript_id=Cattle_Y_T00845;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884189.1
haplotype2-0000357	CAT	exon	34574833	34575015	.	+	.	ID=Cattle_Y_E01171;Parent=Cattle_Y_T00845;Dbxref=GeneID:132344521,GenBank:XM_059884189.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X6;transcript_id=Cattle_Y_T00845;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884189.1-1
haplotype2-0000357	CAT	exon	34575557	34575664	.	+	.	ID=Cattle_Y_E01172;Parent=Cattle_Y_T00845;Dbxref=GeneID:132344521,GenBank:XM_059884189.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X6;transcript_id=Cattle_Y_T00845;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884189.1-2
haplotype2-0000357	CAT	exon	34583894	34584216	.	+	.	ID=Cattle_Y_E01173;Parent=Cattle_Y_T00845;Dbxref=GeneID:132344521,GenBank:XM_059884189.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X6;transcript_id=Cattle_Y_T00845;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884189.1-3
haplotype2-0000357	CAT	exon	34584497	34585102	.	+	.	ID=Cattle_Y_E01174;Parent=Cattle_Y_T00845;Dbxref=GeneID:132344521,GenBank:XM_059884189.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X6;transcript_id=Cattle_Y_T00845;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884189.1-1
haplotype2-0000357	CAT	exon	34586264	34587144	.	+	.	ID=Cattle_Y_E01175;Parent=Cattle_Y_T00845;Dbxref=GeneID:132344521,GenBank:XM_059884189.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344521;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X6;transcript_id=Cattle_Y_T00845;gene_id=Cattle_Y_G00591;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884189.1-5
haplotype2-0000357	CAT	CDS	34583921	34584216	.	+	0	ID=Cattle_Y_C00923;Parent=Cattle_Y_T00845;gene_id=Cattle_Y_G00591;transcript_id=Cattle_Y_T00845;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34584497	34585102	.	+	1	ID=Cattle_Y_C00924;Parent=Cattle_Y_T00845;gene_id=Cattle_Y_G00591;transcript_id=Cattle_Y_T00845;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34586264	34586840	.	+	1	ID=Cattle_Y_C00925;Parent=Cattle_Y_T00845;gene_id=Cattle_Y_G00591;transcript_id=Cattle_Y_T00845;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	34596165	34608489	.	+	.	ID=Cattle_Y_G00592;Dbxref=GeneID:132344518;Name=LOC132344518;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC132344518;gene_biotype=protein_coding;gene_id=Cattle_Y_G00592;source_id=gene-LOC132344518
haplotype2-0000357	CAT	mRNA	34596166	34608489	.	+	.	ID=Cattle_Y_T00846;Parent=Cattle_Y_G00592;Dbxref=GeneID:132344518,GenBank:XM_059884159.1;Name=XM_059884159.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;model_evidence=Supporting evidence includes similarity to: 2 ESTs%2C 14 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X1;transcript_id=Cattle_Y_T00846;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884159.1
haplotype2-0000357	CAT	exon	34596166	34596360	.	+	.	ID=Cattle_Y_E01176;Parent=Cattle_Y_T00846;Dbxref=GeneID:132344518,GenBank:XM_059884159.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00846;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884159.1-1
haplotype2-0000357	CAT	exon	34596902	34597009	.	+	.	ID=Cattle_Y_E01177;Parent=Cattle_Y_T00846;Dbxref=GeneID:132344518,GenBank:XM_059884159.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00846;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884159.1-2
haplotype2-0000357	CAT	exon	34603849	34603915	.	+	.	ID=Cattle_Y_E01178;Parent=Cattle_Y_T00846;Dbxref=GeneID:132344518,GenBank:XM_059884159.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00846;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884159.1-3
haplotype2-0000357	CAT	exon	34605238	34605561	.	+	.	ID=Cattle_Y_E01179;Parent=Cattle_Y_T00846;Dbxref=GeneID:132344518,GenBank:XM_059884159.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00846;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884159.1-4
haplotype2-0000357	CAT	exon	34605842	34606447	.	+	.	ID=Cattle_Y_E01180;Parent=Cattle_Y_T00846;Dbxref=GeneID:132344518,GenBank:XM_059884159.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00846;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884159.1-5
haplotype2-0000357	CAT	exon	34607609	34608489	.	+	.	ID=Cattle_Y_E01181;Parent=Cattle_Y_T00846;Dbxref=GeneID:132344518,GenBank:XM_059884159.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00846;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884159.1-6
haplotype2-0000357	CAT	CDS	34605431	34605561	.	+	0	ID=Cattle_Y_C00926;Parent=Cattle_Y_T00846;Dbxref=GeneID:132344518,GenBank:XP_059740142.1;Name=XP_059740142.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740142.1_1;gene_id=Cattle_Y_G00592;transcript_id=Cattle_Y_T00846;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34605842	34606447	.	+	1	ID=Cattle_Y_C00927;Parent=Cattle_Y_T00846;Dbxref=GeneID:132344518,GenBank:XP_059740142.1;Name=XP_059740142.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740142.1_1;gene_id=Cattle_Y_G00592;transcript_id=Cattle_Y_T00846;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34607609	34608185	.	+	1	ID=Cattle_Y_C00928;Parent=Cattle_Y_T00846;Dbxref=GeneID:132344518,GenBank:XP_059740142.1;Name=XP_059740142.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740142.1_1;gene_id=Cattle_Y_G00592;transcript_id=Cattle_Y_T00846;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34596166	34608489	.	+	.	ID=Cattle_Y_T00847;Parent=Cattle_Y_G00592;Dbxref=GeneID:132344518,GenBank:XM_059884160.1;Name=XM_059884160.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;model_evidence=Supporting evidence includes similarity to: 2 ESTs%2C 14 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X2;transcript_id=Cattle_Y_T00847;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884160.1
haplotype2-0000357	CAT	exon	34596166	34596397	.	+	.	ID=Cattle_Y_E01182;Parent=Cattle_Y_T00847;Dbxref=GeneID:132344518,GenBank:XM_059884160.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00847;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884160.1-1
haplotype2-0000357	CAT	exon	34596902	34597009	.	+	.	ID=Cattle_Y_E01183;Parent=Cattle_Y_T00847;Dbxref=GeneID:132344518,GenBank:XM_059884160.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00847;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884160.1-2
haplotype2-0000357	CAT	exon	34603849	34603915	.	+	.	ID=Cattle_Y_E01184;Parent=Cattle_Y_T00847;Dbxref=GeneID:132344518,GenBank:XM_059884160.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00847;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884160.1-3
haplotype2-0000357	CAT	exon	34605238	34605561	.	+	.	ID=Cattle_Y_E01185;Parent=Cattle_Y_T00847;Dbxref=GeneID:132344518,GenBank:XM_059884160.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00847;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884160.1-4
haplotype2-0000357	CAT	exon	34605842	34606447	.	+	.	ID=Cattle_Y_E01186;Parent=Cattle_Y_T00847;Dbxref=GeneID:132344518,GenBank:XM_059884160.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00847;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884160.1-5
haplotype2-0000357	CAT	exon	34607609	34608489	.	+	.	ID=Cattle_Y_E01187;Parent=Cattle_Y_T00847;Dbxref=GeneID:132344518,GenBank:XM_059884160.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00847;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884160.1-6
haplotype2-0000357	CAT	CDS	34605431	34605561	.	+	0	ID=Cattle_Y_C00929;Parent=Cattle_Y_T00847;Dbxref=GeneID:132344518,GenBank:XP_059740143.1;Name=XP_059740143.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740143.1_1;gene_id=Cattle_Y_G00592;transcript_id=Cattle_Y_T00847;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34605842	34606447	.	+	1	ID=Cattle_Y_C00930;Parent=Cattle_Y_T00847;Dbxref=GeneID:132344518,GenBank:XP_059740143.1;Name=XP_059740143.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740143.1_1;gene_id=Cattle_Y_G00592;transcript_id=Cattle_Y_T00847;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34607609	34608185	.	+	1	ID=Cattle_Y_C00931;Parent=Cattle_Y_T00847;Dbxref=GeneID:132344518,GenBank:XP_059740143.1;Name=XP_059740143.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740143.1_1;gene_id=Cattle_Y_G00592;transcript_id=Cattle_Y_T00847;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34596436	34608489	.	+	.	ID=Cattle_Y_T00848;Parent=Cattle_Y_G00592;Dbxref=GeneID:132344518,GenBank:XM_059884161.1;Name=XM_059884161.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;model_evidence=Supporting evidence includes similarity to: 2 ESTs%2C 14 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X3;transcript_id=Cattle_Y_T00848;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884161.1
haplotype2-0000357	CAT	exon	34596436	34596677	.	+	.	ID=Cattle_Y_E01188;Parent=Cattle_Y_T00848;Dbxref=GeneID:132344518,GenBank:XM_059884161.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00848;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884161.1-1
haplotype2-0000357	CAT	exon	34596902	34597009	.	+	.	ID=Cattle_Y_E01189;Parent=Cattle_Y_T00848;Dbxref=GeneID:132344518,GenBank:XM_059884161.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00848;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884161.1-2
haplotype2-0000357	CAT	exon	34603849	34603915	.	+	.	ID=Cattle_Y_E01190;Parent=Cattle_Y_T00848;Dbxref=GeneID:132344518,GenBank:XM_059884161.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00848;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884161.1-3
haplotype2-0000357	CAT	exon	34605238	34605561	.	+	.	ID=Cattle_Y_E01191;Parent=Cattle_Y_T00848;Dbxref=GeneID:132344518,GenBank:XM_059884161.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00848;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884161.1-4
haplotype2-0000357	CAT	exon	34605842	34606447	.	+	.	ID=Cattle_Y_E01192;Parent=Cattle_Y_T00848;Dbxref=GeneID:132344518,GenBank:XM_059884161.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00848;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884161.1-5
haplotype2-0000357	CAT	exon	34607609	34608489	.	+	.	ID=Cattle_Y_E01193;Parent=Cattle_Y_T00848;Dbxref=GeneID:132344518,GenBank:XM_059884161.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00848;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884161.1-6
haplotype2-0000357	CAT	CDS	34605431	34605561	.	+	0	ID=Cattle_Y_C00932;Parent=Cattle_Y_T00848;Dbxref=GeneID:132344518,GenBank:XP_059740144.1;Name=XP_059740144.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740144.1_1;gene_id=Cattle_Y_G00592;transcript_id=Cattle_Y_T00848;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34605842	34606447	.	+	1	ID=Cattle_Y_C00933;Parent=Cattle_Y_T00848;Dbxref=GeneID:132344518,GenBank:XP_059740144.1;Name=XP_059740144.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740144.1_1;gene_id=Cattle_Y_G00592;transcript_id=Cattle_Y_T00848;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34607609	34608185	.	+	1	ID=Cattle_Y_C00934;Parent=Cattle_Y_T00848;Dbxref=GeneID:132344518,GenBank:XP_059740144.1;Name=XP_059740144.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740144.1_1;gene_id=Cattle_Y_G00592;transcript_id=Cattle_Y_T00848;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34596165	34608489	.	+	.	ID=Cattle_Y_T00849;Parent=Cattle_Y_G00592;Dbxref=GeneID:132344518,GenBank:XM_059884162.1;Name=XM_059884162.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;model_evidence=Supporting evidence includes similarity to: 2 ESTs%2C 14 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X4;transcript_id=Cattle_Y_T00849;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884162.1
haplotype2-0000357	CAT	exon	34596165	34596360	.	+	.	ID=Cattle_Y_E01194;Parent=Cattle_Y_T00849;Dbxref=GeneID:132344518,GenBank:XM_059884162.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00849;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884162.1-1
haplotype2-0000357	CAT	exon	34596902	34597009	.	+	.	ID=Cattle_Y_E01195;Parent=Cattle_Y_T00849;Dbxref=GeneID:132344518,GenBank:XM_059884162.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00849;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884162.1-2
haplotype2-0000357	CAT	exon	34602229	34602459	.	+	.	ID=Cattle_Y_E01196;Parent=Cattle_Y_T00849;Dbxref=GeneID:132344518,GenBank:XM_059884162.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00849;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884162.1-3
haplotype2-0000357	CAT	exon	34603849	34603915	.	+	.	ID=Cattle_Y_E01197;Parent=Cattle_Y_T00849;Dbxref=GeneID:132344518,GenBank:XM_059884162.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00849;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884162.1-4
haplotype2-0000357	CAT	exon	34605238	34605561	.	+	.	ID=Cattle_Y_E01198;Parent=Cattle_Y_T00849;Dbxref=GeneID:132344518,GenBank:XM_059884162.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00849;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884162.1-5
haplotype2-0000357	CAT	exon	34605842	34606447	.	+	.	ID=Cattle_Y_E01199;Parent=Cattle_Y_T00849;Dbxref=GeneID:132344518,GenBank:XM_059884162.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00849;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884162.1-6
haplotype2-0000357	CAT	exon	34607609	34608489	.	+	.	ID=Cattle_Y_E01200;Parent=Cattle_Y_T00849;Dbxref=GeneID:132344518,GenBank:XM_059884162.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00849;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884162.1-7
haplotype2-0000357	CAT	CDS	34605431	34605561	.	+	0	ID=Cattle_Y_C00935;Parent=Cattle_Y_T00849;Dbxref=GeneID:132344518,GenBank:XP_059740145.1;Name=XP_059740145.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740145.1_1;gene_id=Cattle_Y_G00592;transcript_id=Cattle_Y_T00849;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34605842	34606447	.	+	1	ID=Cattle_Y_C00936;Parent=Cattle_Y_T00849;Dbxref=GeneID:132344518,GenBank:XP_059740145.1;Name=XP_059740145.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740145.1_1;gene_id=Cattle_Y_G00592;transcript_id=Cattle_Y_T00849;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34607609	34608185	.	+	1	ID=Cattle_Y_C00937;Parent=Cattle_Y_T00849;Dbxref=GeneID:132344518,GenBank:XP_059740145.1;Name=XP_059740145.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740145.1_1;gene_id=Cattle_Y_G00592;transcript_id=Cattle_Y_T00849;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34596166	34608489	.	+	.	ID=Cattle_Y_T00850;Parent=Cattle_Y_G00592;Dbxref=GeneID:132344518,GenBank:XM_059884163.1;Name=XM_059884163.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;model_evidence=Supporting evidence includes similarity to: 2 ESTs%2C 12 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X5;transcript_id=Cattle_Y_T00850;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884163.1
haplotype2-0000357	CAT	exon	34596166	34596360	.	+	.	ID=Cattle_Y_E01201;Parent=Cattle_Y_T00850;Dbxref=GeneID:132344518,GenBank:XM_059884163.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00850;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884163.1-1
haplotype2-0000357	CAT	exon	34596902	34597009	.	+	.	ID=Cattle_Y_E01202;Parent=Cattle_Y_T00850;Dbxref=GeneID:132344518,GenBank:XM_059884163.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00850;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884163.1-2
haplotype2-0000357	CAT	exon	34605238	34605561	.	+	.	ID=Cattle_Y_E01203;Parent=Cattle_Y_T00850;Dbxref=GeneID:132344518,GenBank:XM_059884163.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00850;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884163.1-3
haplotype2-0000357	CAT	exon	34605842	34606447	.	+	.	ID=Cattle_Y_E01204;Parent=Cattle_Y_T00850;Dbxref=GeneID:132344518,GenBank:XM_059884163.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00850;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884163.1-4
haplotype2-0000357	CAT	exon	34607609	34608489	.	+	.	ID=Cattle_Y_E01205;Parent=Cattle_Y_T00850;Dbxref=GeneID:132344518,GenBank:XM_059884163.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00850;gene_id=Cattle_Y_G00592;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884163.1-5
haplotype2-0000357	CAT	CDS	34605431	34605561	.	+	0	ID=Cattle_Y_C00938;Parent=Cattle_Y_T00850;Dbxref=GeneID:132344518,GenBank:XP_059740146.1;Name=XP_059740146.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740146.1_1;gene_id=Cattle_Y_G00592;transcript_id=Cattle_Y_T00850;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34605842	34606447	.	+	1	ID=Cattle_Y_C00939;Parent=Cattle_Y_T00850;Dbxref=GeneID:132344518,GenBank:XP_059740146.1;Name=XP_059740146.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740146.1_1;gene_id=Cattle_Y_G00592;transcript_id=Cattle_Y_T00850;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34607609	34608185	.	+	1	ID=Cattle_Y_C00940;Parent=Cattle_Y_T00850;Dbxref=GeneID:132344518,GenBank:XP_059740146.1;Name=XP_059740146.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740146.1_1;gene_id=Cattle_Y_G00592;transcript_id=Cattle_Y_T00850;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	34617498	34629805	.	+	.	ID=Cattle_Y_G00593;Dbxref=GeneID:132344519;Name=LOC132344519;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC132344519;gene_biotype=protein_coding;gene_id=Cattle_Y_G00593;source_id=gene-LOC132344519
haplotype2-0000357	CAT	mRNA	34617499	34629805	.	+	.	ID=Cattle_Y_T00851;Parent=Cattle_Y_G00593;Dbxref=GeneID:132344519,GenBank:XM_059884164.1;Name=XM_059884164.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 14 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X1;transcript_id=Cattle_Y_T00851;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884164.1
haplotype2-0000357	CAT	exon	34617499	34617682	.	+	.	ID=Cattle_Y_E01206;Parent=Cattle_Y_T00851;Dbxref=GeneID:132344519,GenBank:XM_059884164.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00851;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884164.1-1
haplotype2-0000357	CAT	exon	34618224	34618331	.	+	.	ID=Cattle_Y_E01207;Parent=Cattle_Y_T00851;Dbxref=GeneID:132344519,GenBank:XM_059884164.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00851;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884164.1-2
haplotype2-0000357	CAT	exon	34625166	34625232	.	+	.	ID=Cattle_Y_E01208;Parent=Cattle_Y_T00851;Dbxref=GeneID:132344519,GenBank:XM_059884164.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00851;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884164.1-3
haplotype2-0000357	CAT	exon	34626555	34626877	.	+	.	ID=Cattle_Y_E01209;Parent=Cattle_Y_T00851;Dbxref=GeneID:132344519,GenBank:XM_059884164.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00851;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884164.1-1
haplotype2-0000357	CAT	exon	34627158	34627763	.	+	.	ID=Cattle_Y_E01210;Parent=Cattle_Y_T00851;Dbxref=GeneID:132344519,GenBank:XM_059884164.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00851;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884164.1-1
haplotype2-0000357	CAT	exon	34628925	34629805	.	+	.	ID=Cattle_Y_E01211;Parent=Cattle_Y_T00851;Dbxref=GeneID:132344519,GenBank:XM_059884164.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00851;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884164.1-6
haplotype2-0000357	CAT	CDS	34625197	34625232	.	+	0	ID=Cattle_Y_C00941;Parent=Cattle_Y_T00851;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00851;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34626555	34626877	.	+	0	ID=Cattle_Y_C00942;Parent=Cattle_Y_T00851;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00851;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34627158	34627763	.	+	1	ID=Cattle_Y_C00943;Parent=Cattle_Y_T00851;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00851;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34628925	34629501	.	+	1	ID=Cattle_Y_C00944;Parent=Cattle_Y_T00851;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00851;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34617780	34629805	.	+	.	ID=Cattle_Y_T00852;Parent=Cattle_Y_G00593;Dbxref=GeneID:132344519,GenBank:XM_059884165.1;Name=XM_059884165.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 14 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X2;transcript_id=Cattle_Y_T00852;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884165.1
haplotype2-0000357	CAT	exon	34617780	34617999	.	+	.	ID=Cattle_Y_E01212;Parent=Cattle_Y_T00852;Dbxref=GeneID:132344519,GenBank:XM_059884165.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00852;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884165.1-1
haplotype2-0000357	CAT	exon	34618224	34618331	.	+	.	ID=Cattle_Y_E01213;Parent=Cattle_Y_T00852;Dbxref=GeneID:132344519,GenBank:XM_059884165.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00852;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884165.1-2
haplotype2-0000357	CAT	exon	34625166	34625232	.	+	.	ID=Cattle_Y_E01214;Parent=Cattle_Y_T00852;Dbxref=GeneID:132344519,GenBank:XM_059884165.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00852;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884165.1-3
haplotype2-0000357	CAT	exon	34626555	34626877	.	+	.	ID=Cattle_Y_E01215;Parent=Cattle_Y_T00852;Dbxref=GeneID:132344519,GenBank:XM_059884165.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00852;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884165.1-1
haplotype2-0000357	CAT	exon	34627158	34627763	.	+	.	ID=Cattle_Y_E01216;Parent=Cattle_Y_T00852;Dbxref=GeneID:132344519,GenBank:XM_059884165.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00852;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884165.1-1
haplotype2-0000357	CAT	exon	34628925	34629805	.	+	.	ID=Cattle_Y_E01217;Parent=Cattle_Y_T00852;Dbxref=GeneID:132344519,GenBank:XM_059884165.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00852;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884165.1-6
haplotype2-0000357	CAT	CDS	34625197	34625232	.	+	0	ID=Cattle_Y_C00945;Parent=Cattle_Y_T00852;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00852;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34626555	34626877	.	+	0	ID=Cattle_Y_C00946;Parent=Cattle_Y_T00852;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00852;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34627158	34627763	.	+	1	ID=Cattle_Y_C00947;Parent=Cattle_Y_T00852;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00852;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34628925	34629501	.	+	1	ID=Cattle_Y_C00948;Parent=Cattle_Y_T00852;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00852;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34617499	34629805	.	+	.	ID=Cattle_Y_T00853;Parent=Cattle_Y_G00593;Dbxref=GeneID:132344519,GenBank:XM_059884166.1;Name=XM_059884166.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 14 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X3;transcript_id=Cattle_Y_T00853;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884166.1
haplotype2-0000357	CAT	exon	34617499	34617719	.	+	.	ID=Cattle_Y_E01218;Parent=Cattle_Y_T00853;Dbxref=GeneID:132344519,GenBank:XM_059884166.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00853;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884166.1-1
haplotype2-0000357	CAT	exon	34618224	34618331	.	+	.	ID=Cattle_Y_E01219;Parent=Cattle_Y_T00853;Dbxref=GeneID:132344519,GenBank:XM_059884166.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00853;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884166.1-2
haplotype2-0000357	CAT	exon	34625166	34625232	.	+	.	ID=Cattle_Y_E01220;Parent=Cattle_Y_T00853;Dbxref=GeneID:132344519,GenBank:XM_059884166.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00853;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884166.1-3
haplotype2-0000357	CAT	exon	34626555	34626877	.	+	.	ID=Cattle_Y_E01221;Parent=Cattle_Y_T00853;Dbxref=GeneID:132344519,GenBank:XM_059884166.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00853;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884166.1-1
haplotype2-0000357	CAT	exon	34627158	34627763	.	+	.	ID=Cattle_Y_E01222;Parent=Cattle_Y_T00853;Dbxref=GeneID:132344519,GenBank:XM_059884166.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00853;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884166.1-1
haplotype2-0000357	CAT	exon	34628925	34629805	.	+	.	ID=Cattle_Y_E01223;Parent=Cattle_Y_T00853;Dbxref=GeneID:132344519,GenBank:XM_059884166.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00853;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884166.1-6
haplotype2-0000357	CAT	CDS	34625197	34625232	.	+	0	ID=Cattle_Y_C00949;Parent=Cattle_Y_T00853;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00853;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34626555	34626877	.	+	0	ID=Cattle_Y_C00950;Parent=Cattle_Y_T00853;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00853;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34627158	34627763	.	+	1	ID=Cattle_Y_C00951;Parent=Cattle_Y_T00853;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00853;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34628925	34629501	.	+	1	ID=Cattle_Y_C00952;Parent=Cattle_Y_T00853;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00853;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34617780	34629805	.	+	.	ID=Cattle_Y_T00854;Parent=Cattle_Y_G00593;Dbxref=GeneID:132344519,GenBank:XM_059884167.1;Name=XM_059884167.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 14 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X4;transcript_id=Cattle_Y_T00854;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884167.1
haplotype2-0000357	CAT	exon	34617780	34617945	.	+	.	ID=Cattle_Y_E01224;Parent=Cattle_Y_T00854;Dbxref=GeneID:132344519,GenBank:XM_059884167.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00854;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884167.1-1
haplotype2-0000357	CAT	exon	34618224	34618331	.	+	.	ID=Cattle_Y_E01225;Parent=Cattle_Y_T00854;Dbxref=GeneID:132344519,GenBank:XM_059884167.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00854;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884167.1-2
haplotype2-0000357	CAT	exon	34625166	34625232	.	+	.	ID=Cattle_Y_E01226;Parent=Cattle_Y_T00854;Dbxref=GeneID:132344519,GenBank:XM_059884167.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00854;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884167.1-3
haplotype2-0000357	CAT	exon	34626555	34626877	.	+	.	ID=Cattle_Y_E01227;Parent=Cattle_Y_T00854;Dbxref=GeneID:132344519,GenBank:XM_059884167.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00854;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884167.1-1
haplotype2-0000357	CAT	exon	34627158	34627763	.	+	.	ID=Cattle_Y_E01228;Parent=Cattle_Y_T00854;Dbxref=GeneID:132344519,GenBank:XM_059884167.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00854;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884167.1-1
haplotype2-0000357	CAT	exon	34628925	34629805	.	+	.	ID=Cattle_Y_E01229;Parent=Cattle_Y_T00854;Dbxref=GeneID:132344519,GenBank:XM_059884167.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00854;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884167.1-6
haplotype2-0000357	CAT	CDS	34625197	34625232	.	+	0	ID=Cattle_Y_C00953;Parent=Cattle_Y_T00854;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00854;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34626555	34626877	.	+	0	ID=Cattle_Y_C00954;Parent=Cattle_Y_T00854;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00854;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34627158	34627763	.	+	1	ID=Cattle_Y_C00955;Parent=Cattle_Y_T00854;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00854;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34628925	34629501	.	+	1	ID=Cattle_Y_C00956;Parent=Cattle_Y_T00854;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00854;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34617498	34629805	.	+	.	ID=Cattle_Y_T00855;Parent=Cattle_Y_G00593;Dbxref=GeneID:132344519,GenBank:XM_059884168.1;Name=XM_059884168.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 14 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X5;transcript_id=Cattle_Y_T00855;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884168.1
haplotype2-0000357	CAT	exon	34617498	34617682	.	+	.	ID=Cattle_Y_E01230;Parent=Cattle_Y_T00855;Dbxref=GeneID:132344519,GenBank:XM_059884168.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00855;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884168.1-1
haplotype2-0000357	CAT	exon	34618224	34618331	.	+	.	ID=Cattle_Y_E01231;Parent=Cattle_Y_T00855;Dbxref=GeneID:132344519,GenBank:XM_059884168.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00855;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884168.1-2
haplotype2-0000357	CAT	exon	34623548	34623778	.	+	.	ID=Cattle_Y_E01232;Parent=Cattle_Y_T00855;Dbxref=GeneID:132344519,GenBank:XM_059884168.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00855;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884168.1-3
haplotype2-0000357	CAT	exon	34625166	34625232	.	+	.	ID=Cattle_Y_E01233;Parent=Cattle_Y_T00855;Dbxref=GeneID:132344519,GenBank:XM_059884168.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00855;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884168.1-4
haplotype2-0000357	CAT	exon	34626555	34626877	.	+	.	ID=Cattle_Y_E01234;Parent=Cattle_Y_T00855;Dbxref=GeneID:132344519,GenBank:XM_059884168.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00855;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884168.1-1
haplotype2-0000357	CAT	exon	34627158	34627763	.	+	.	ID=Cattle_Y_E01235;Parent=Cattle_Y_T00855;Dbxref=GeneID:132344519,GenBank:XM_059884168.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00855;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884168.1-1
haplotype2-0000357	CAT	exon	34628925	34629805	.	+	.	ID=Cattle_Y_E01236;Parent=Cattle_Y_T00855;Dbxref=GeneID:132344519,GenBank:XM_059884168.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00855;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884168.1-7
haplotype2-0000357	CAT	CDS	34625197	34625232	.	+	0	ID=Cattle_Y_C00957;Parent=Cattle_Y_T00855;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00855;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34626555	34626877	.	+	0	ID=Cattle_Y_C00958;Parent=Cattle_Y_T00855;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00855;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34627158	34627763	.	+	1	ID=Cattle_Y_C00959;Parent=Cattle_Y_T00855;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00855;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34628925	34629501	.	+	1	ID=Cattle_Y_C00960;Parent=Cattle_Y_T00855;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00855;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34620206	34629805	.	+	.	ID=Cattle_Y_T00856;Parent=Cattle_Y_G00593;Dbxref=GeneID:132344519,GenBank:XM_059884169.1;Name=XM_059884169.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 14 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X6;transcript_id=Cattle_Y_T00856;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884169.1
haplotype2-0000357	CAT	exon	34620206	34623778	.	+	.	ID=Cattle_Y_E01237;Parent=Cattle_Y_T00856;Dbxref=GeneID:132344519,GenBank:XM_059884169.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X6;transcript_id=Cattle_Y_T00856;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884169.1-1
haplotype2-0000357	CAT	exon	34625166	34625232	.	+	.	ID=Cattle_Y_E01238;Parent=Cattle_Y_T00856;Dbxref=GeneID:132344519,GenBank:XM_059884169.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X6;transcript_id=Cattle_Y_T00856;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884169.1-2
haplotype2-0000357	CAT	exon	34626555	34626877	.	+	.	ID=Cattle_Y_E01239;Parent=Cattle_Y_T00856;Dbxref=GeneID:132344519,GenBank:XM_059884169.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X6;transcript_id=Cattle_Y_T00856;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884169.1-1
haplotype2-0000357	CAT	exon	34627158	34627763	.	+	.	ID=Cattle_Y_E01240;Parent=Cattle_Y_T00856;Dbxref=GeneID:132344519,GenBank:XM_059884169.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X6;transcript_id=Cattle_Y_T00856;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884169.1-1
haplotype2-0000357	CAT	exon	34628925	34629805	.	+	.	ID=Cattle_Y_E01241;Parent=Cattle_Y_T00856;Dbxref=GeneID:132344519,GenBank:XM_059884169.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X6;transcript_id=Cattle_Y_T00856;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884169.1-5
haplotype2-0000357	CAT	CDS	34625197	34625232	.	+	0	ID=Cattle_Y_C00961;Parent=Cattle_Y_T00856;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00856;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34626555	34626877	.	+	0	ID=Cattle_Y_C00962;Parent=Cattle_Y_T00856;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00856;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34627158	34627763	.	+	1	ID=Cattle_Y_C00963;Parent=Cattle_Y_T00856;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00856;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34628925	34629501	.	+	1	ID=Cattle_Y_C00964;Parent=Cattle_Y_T00856;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00856;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34617500	34629805	.	+	.	ID=Cattle_Y_T00857;Parent=Cattle_Y_G00593;Dbxref=GeneID:132344519,GenBank:XM_059884170.1;Name=XM_059884170.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 12 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X7;transcript_id=Cattle_Y_T00857;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884170.1
haplotype2-0000357	CAT	exon	34617500	34617682	.	+	.	ID=Cattle_Y_E01242;Parent=Cattle_Y_T00857;Dbxref=GeneID:132344519,GenBank:XM_059884170.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X7;transcript_id=Cattle_Y_T00857;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884170.1-1
haplotype2-0000357	CAT	exon	34618224	34618331	.	+	.	ID=Cattle_Y_E01243;Parent=Cattle_Y_T00857;Dbxref=GeneID:132344519,GenBank:XM_059884170.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X7;transcript_id=Cattle_Y_T00857;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884170.1-2
haplotype2-0000357	CAT	exon	34626555	34626877	.	+	.	ID=Cattle_Y_E01244;Parent=Cattle_Y_T00857;Dbxref=GeneID:132344519,GenBank:XM_059884170.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X7;transcript_id=Cattle_Y_T00857;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884170.1-3
haplotype2-0000357	CAT	exon	34627158	34627763	.	+	.	ID=Cattle_Y_E01245;Parent=Cattle_Y_T00857;Dbxref=GeneID:132344519,GenBank:XM_059884170.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X7;transcript_id=Cattle_Y_T00857;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884170.1-1
haplotype2-0000357	CAT	exon	34628925	34629805	.	+	.	ID=Cattle_Y_E01246;Parent=Cattle_Y_T00857;Dbxref=GeneID:132344519,GenBank:XM_059884170.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344519;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X7;transcript_id=Cattle_Y_T00857;gene_id=Cattle_Y_G00593;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884170.1-5
haplotype2-0000357	CAT	CDS	34626582	34626877	.	+	0	ID=Cattle_Y_C00965;Parent=Cattle_Y_T00857;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00857;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34627158	34627763	.	+	1	ID=Cattle_Y_C00966;Parent=Cattle_Y_T00857;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00857;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34628925	34629501	.	+	1	ID=Cattle_Y_C00967;Parent=Cattle_Y_T00857;gene_id=Cattle_Y_G00593;transcript_id=Cattle_Y_T00857;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	34638827	34651158	.	+	.	ID=Cattle_Y_G00594;Dbxref=GeneID:132344518;Name=LOC132344518;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC132344518;gene_biotype=protein_coding;gene_id=Cattle_Y_G00594;source_id=gene-LOC132344518
haplotype2-0000357	CAT	mRNA	34638828	34651158	.	+	.	ID=Cattle_Y_T00858;Parent=Cattle_Y_G00594;Dbxref=GeneID:132344518,GenBank:XM_059884159.1;Name=XM_059884159.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;model_evidence=Supporting evidence includes similarity to: 2 ESTs%2C 14 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X1;transcript_id=Cattle_Y_T00858;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884159.1
haplotype2-0000357	CAT	exon	34638828	34639022	.	+	.	ID=Cattle_Y_E01247;Parent=Cattle_Y_T00858;Dbxref=GeneID:132344518,GenBank:XM_059884159.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00858;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884159.1-1
haplotype2-0000357	CAT	exon	34639564	34639671	.	+	.	ID=Cattle_Y_E01248;Parent=Cattle_Y_T00858;Dbxref=GeneID:132344518,GenBank:XM_059884159.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00858;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884159.1-2
haplotype2-0000357	CAT	exon	34646513	34646579	.	+	.	ID=Cattle_Y_E01249;Parent=Cattle_Y_T00858;Dbxref=GeneID:132344518,GenBank:XM_059884159.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00858;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884159.1-3
haplotype2-0000357	CAT	exon	34647902	34648224	.	+	.	ID=Cattle_Y_E01250;Parent=Cattle_Y_T00858;Dbxref=GeneID:132344518,GenBank:XM_059884159.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00858;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884159.1-4
haplotype2-0000357	CAT	exon	34648504	34649109	.	+	.	ID=Cattle_Y_E01251;Parent=Cattle_Y_T00858;Dbxref=GeneID:132344518,GenBank:XM_059884159.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00858;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884159.1-5
haplotype2-0000357	CAT	exon	34650271	34651158	.	+	.	ID=Cattle_Y_E01252;Parent=Cattle_Y_T00858;Dbxref=GeneID:132344518,GenBank:XM_059884159.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00858;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884159.1-6
haplotype2-0000357	CAT	CDS	34646544	34646579	.	+	0	ID=Cattle_Y_C00968;Parent=Cattle_Y_T00858;Dbxref=GeneID:132344518,GenBank:XP_059740142.1;Name=XP_059740142.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740142.1;gene_id=Cattle_Y_G00594;transcript_id=Cattle_Y_T00858;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34647902	34648224	.	+	0	ID=Cattle_Y_C00969;Parent=Cattle_Y_T00858;Dbxref=GeneID:132344518,GenBank:XP_059740142.1;Name=XP_059740142.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740142.1;gene_id=Cattle_Y_G00594;transcript_id=Cattle_Y_T00858;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34648504	34649109	.	+	1	ID=Cattle_Y_C00970;Parent=Cattle_Y_T00858;Dbxref=GeneID:132344518,GenBank:XP_059740142.1;Name=XP_059740142.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740142.1;gene_id=Cattle_Y_G00594;transcript_id=Cattle_Y_T00858;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34650271	34650847	.	+	1	ID=Cattle_Y_C00971;Parent=Cattle_Y_T00858;Dbxref=GeneID:132344518,GenBank:XP_059740142.1;Name=XP_059740142.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740142.1;gene_id=Cattle_Y_G00594;transcript_id=Cattle_Y_T00858;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34638828	34651158	.	+	.	ID=Cattle_Y_T00859;Parent=Cattle_Y_G00594;Dbxref=GeneID:132344518,GenBank:XM_059884160.1;Name=XM_059884160.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;model_evidence=Supporting evidence includes similarity to: 2 ESTs%2C 14 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X2;transcript_id=Cattle_Y_T00859;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884160.1
haplotype2-0000357	CAT	exon	34638828	34639059	.	+	.	ID=Cattle_Y_E01253;Parent=Cattle_Y_T00859;Dbxref=GeneID:132344518,GenBank:XM_059884160.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00859;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884160.1-1
haplotype2-0000357	CAT	exon	34639564	34639671	.	+	.	ID=Cattle_Y_E01254;Parent=Cattle_Y_T00859;Dbxref=GeneID:132344518,GenBank:XM_059884160.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00859;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884160.1-2
haplotype2-0000357	CAT	exon	34646513	34646579	.	+	.	ID=Cattle_Y_E01255;Parent=Cattle_Y_T00859;Dbxref=GeneID:132344518,GenBank:XM_059884160.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00859;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884160.1-3
haplotype2-0000357	CAT	exon	34647902	34648224	.	+	.	ID=Cattle_Y_E01256;Parent=Cattle_Y_T00859;Dbxref=GeneID:132344518,GenBank:XM_059884160.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00859;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884160.1-4
haplotype2-0000357	CAT	exon	34648504	34649109	.	+	.	ID=Cattle_Y_E01257;Parent=Cattle_Y_T00859;Dbxref=GeneID:132344518,GenBank:XM_059884160.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00859;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884160.1-5
haplotype2-0000357	CAT	exon	34650271	34651158	.	+	.	ID=Cattle_Y_E01258;Parent=Cattle_Y_T00859;Dbxref=GeneID:132344518,GenBank:XM_059884160.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00859;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884160.1-6
haplotype2-0000357	CAT	CDS	34646544	34646579	.	+	0	ID=Cattle_Y_C00972;Parent=Cattle_Y_T00859;Dbxref=GeneID:132344518,GenBank:XP_059740143.1;Name=XP_059740143.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740143.1;gene_id=Cattle_Y_G00594;transcript_id=Cattle_Y_T00859;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34647902	34648224	.	+	0	ID=Cattle_Y_C00973;Parent=Cattle_Y_T00859;Dbxref=GeneID:132344518,GenBank:XP_059740143.1;Name=XP_059740143.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740143.1;gene_id=Cattle_Y_G00594;transcript_id=Cattle_Y_T00859;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34648504	34649109	.	+	1	ID=Cattle_Y_C00974;Parent=Cattle_Y_T00859;Dbxref=GeneID:132344518,GenBank:XP_059740143.1;Name=XP_059740143.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740143.1;gene_id=Cattle_Y_G00594;transcript_id=Cattle_Y_T00859;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34650271	34650847	.	+	1	ID=Cattle_Y_C00975;Parent=Cattle_Y_T00859;Dbxref=GeneID:132344518,GenBank:XP_059740143.1;Name=XP_059740143.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740143.1;gene_id=Cattle_Y_G00594;transcript_id=Cattle_Y_T00859;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34639098	34651158	.	+	.	ID=Cattle_Y_T00860;Parent=Cattle_Y_G00594;Dbxref=GeneID:132344518,GenBank:XM_059884161.1;Name=XM_059884161.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;model_evidence=Supporting evidence includes similarity to: 2 ESTs%2C 14 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X3;transcript_id=Cattle_Y_T00860;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884161.1
haplotype2-0000357	CAT	exon	34639098	34639339	.	+	.	ID=Cattle_Y_E01259;Parent=Cattle_Y_T00860;Dbxref=GeneID:132344518,GenBank:XM_059884161.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00860;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884161.1-1
haplotype2-0000357	CAT	exon	34639564	34639671	.	+	.	ID=Cattle_Y_E01260;Parent=Cattle_Y_T00860;Dbxref=GeneID:132344518,GenBank:XM_059884161.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00860;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884161.1-2
haplotype2-0000357	CAT	exon	34646513	34646579	.	+	.	ID=Cattle_Y_E01261;Parent=Cattle_Y_T00860;Dbxref=GeneID:132344518,GenBank:XM_059884161.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00860;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884161.1-3
haplotype2-0000357	CAT	exon	34647902	34648224	.	+	.	ID=Cattle_Y_E01262;Parent=Cattle_Y_T00860;Dbxref=GeneID:132344518,GenBank:XM_059884161.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00860;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884161.1-4
haplotype2-0000357	CAT	exon	34648504	34649109	.	+	.	ID=Cattle_Y_E01263;Parent=Cattle_Y_T00860;Dbxref=GeneID:132344518,GenBank:XM_059884161.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00860;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884161.1-5
haplotype2-0000357	CAT	exon	34650271	34651158	.	+	.	ID=Cattle_Y_E01264;Parent=Cattle_Y_T00860;Dbxref=GeneID:132344518,GenBank:XM_059884161.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00860;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884161.1-6
haplotype2-0000357	CAT	CDS	34646544	34646579	.	+	0	ID=Cattle_Y_C00976;Parent=Cattle_Y_T00860;Dbxref=GeneID:132344518,GenBank:XP_059740144.1;Name=XP_059740144.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740144.1;gene_id=Cattle_Y_G00594;transcript_id=Cattle_Y_T00860;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34647902	34648224	.	+	0	ID=Cattle_Y_C00977;Parent=Cattle_Y_T00860;Dbxref=GeneID:132344518,GenBank:XP_059740144.1;Name=XP_059740144.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740144.1;gene_id=Cattle_Y_G00594;transcript_id=Cattle_Y_T00860;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34648504	34649109	.	+	1	ID=Cattle_Y_C00978;Parent=Cattle_Y_T00860;Dbxref=GeneID:132344518,GenBank:XP_059740144.1;Name=XP_059740144.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740144.1;gene_id=Cattle_Y_G00594;transcript_id=Cattle_Y_T00860;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34650271	34650847	.	+	1	ID=Cattle_Y_C00979;Parent=Cattle_Y_T00860;Dbxref=GeneID:132344518,GenBank:XP_059740144.1;Name=XP_059740144.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740144.1;gene_id=Cattle_Y_G00594;transcript_id=Cattle_Y_T00860;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34638827	34651158	.	+	.	ID=Cattle_Y_T00861;Parent=Cattle_Y_G00594;Dbxref=GeneID:132344518,GenBank:XM_059884162.1;Name=XM_059884162.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;model_evidence=Supporting evidence includes similarity to: 2 ESTs%2C 14 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X4;transcript_id=Cattle_Y_T00861;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884162.1
haplotype2-0000357	CAT	exon	34638827	34639022	.	+	.	ID=Cattle_Y_E01265;Parent=Cattle_Y_T00861;Dbxref=GeneID:132344518,GenBank:XM_059884162.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00861;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884162.1-1
haplotype2-0000357	CAT	exon	34639564	34639671	.	+	.	ID=Cattle_Y_E01266;Parent=Cattle_Y_T00861;Dbxref=GeneID:132344518,GenBank:XM_059884162.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00861;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884162.1-2
haplotype2-0000357	CAT	exon	34644893	34645123	.	+	.	ID=Cattle_Y_E01267;Parent=Cattle_Y_T00861;Dbxref=GeneID:132344518,GenBank:XM_059884162.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00861;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884162.1-3
haplotype2-0000357	CAT	exon	34646513	34646579	.	+	.	ID=Cattle_Y_E01268;Parent=Cattle_Y_T00861;Dbxref=GeneID:132344518,GenBank:XM_059884162.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00861;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884162.1-4
haplotype2-0000357	CAT	exon	34647902	34648224	.	+	.	ID=Cattle_Y_E01269;Parent=Cattle_Y_T00861;Dbxref=GeneID:132344518,GenBank:XM_059884162.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00861;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884162.1-5
haplotype2-0000357	CAT	exon	34648504	34649109	.	+	.	ID=Cattle_Y_E01270;Parent=Cattle_Y_T00861;Dbxref=GeneID:132344518,GenBank:XM_059884162.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00861;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884162.1-6
haplotype2-0000357	CAT	exon	34650271	34651158	.	+	.	ID=Cattle_Y_E01271;Parent=Cattle_Y_T00861;Dbxref=GeneID:132344518,GenBank:XM_059884162.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00861;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884162.1-7
haplotype2-0000357	CAT	CDS	34646544	34646579	.	+	0	ID=Cattle_Y_C00980;Parent=Cattle_Y_T00861;Dbxref=GeneID:132344518,GenBank:XP_059740145.1;Name=XP_059740145.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740145.1;gene_id=Cattle_Y_G00594;transcript_id=Cattle_Y_T00861;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34647902	34648224	.	+	0	ID=Cattle_Y_C00981;Parent=Cattle_Y_T00861;Dbxref=GeneID:132344518,GenBank:XP_059740145.1;Name=XP_059740145.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740145.1;gene_id=Cattle_Y_G00594;transcript_id=Cattle_Y_T00861;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34648504	34649109	.	+	1	ID=Cattle_Y_C00982;Parent=Cattle_Y_T00861;Dbxref=GeneID:132344518,GenBank:XP_059740145.1;Name=XP_059740145.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740145.1;gene_id=Cattle_Y_G00594;transcript_id=Cattle_Y_T00861;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34650271	34650847	.	+	1	ID=Cattle_Y_C00983;Parent=Cattle_Y_T00861;Dbxref=GeneID:132344518,GenBank:XP_059740145.1;Name=XP_059740145.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740145.1;gene_id=Cattle_Y_G00594;transcript_id=Cattle_Y_T00861;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34638828	34651158	.	+	.	ID=Cattle_Y_T00862;Parent=Cattle_Y_G00594;Dbxref=GeneID:132344518,GenBank:XM_059884163.1;Name=XM_059884163.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;model_evidence=Supporting evidence includes similarity to: 2 ESTs%2C 12 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X5;transcript_id=Cattle_Y_T00862;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884163.1
haplotype2-0000357	CAT	exon	34638828	34639022	.	+	.	ID=Cattle_Y_E01272;Parent=Cattle_Y_T00862;Dbxref=GeneID:132344518,GenBank:XM_059884163.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00862;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884163.1-1
haplotype2-0000357	CAT	exon	34639564	34639671	.	+	.	ID=Cattle_Y_E01273;Parent=Cattle_Y_T00862;Dbxref=GeneID:132344518,GenBank:XM_059884163.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00862;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884163.1-2
haplotype2-0000357	CAT	exon	34647902	34648224	.	+	.	ID=Cattle_Y_E01274;Parent=Cattle_Y_T00862;Dbxref=GeneID:132344518,GenBank:XM_059884163.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00862;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884163.1-3
haplotype2-0000357	CAT	exon	34648504	34649109	.	+	.	ID=Cattle_Y_E01275;Parent=Cattle_Y_T00862;Dbxref=GeneID:132344518,GenBank:XM_059884163.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00862;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884163.1-4
haplotype2-0000357	CAT	exon	34650271	34651158	.	+	.	ID=Cattle_Y_E01276;Parent=Cattle_Y_T00862;Dbxref=GeneID:132344518,GenBank:XM_059884163.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00862;gene_id=Cattle_Y_G00594;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884163.1-5
haplotype2-0000357	CAT	CDS	34647929	34648224	.	+	0	ID=Cattle_Y_C00984;Parent=Cattle_Y_T00862;Dbxref=GeneID:132344518,GenBank:XP_059740146.1;Name=XP_059740146.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740146.1;gene_id=Cattle_Y_G00594;transcript_id=Cattle_Y_T00862;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34648504	34649109	.	+	1	ID=Cattle_Y_C00985;Parent=Cattle_Y_T00862;Dbxref=GeneID:132344518,GenBank:XP_059740146.1;Name=XP_059740146.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740146.1;gene_id=Cattle_Y_G00594;transcript_id=Cattle_Y_T00862;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34650271	34650847	.	+	1	ID=Cattle_Y_C00986;Parent=Cattle_Y_T00862;Dbxref=GeneID:132344518,GenBank:XP_059740146.1;Name=XP_059740146.1;gbkey=CDS;gene=LOC132344518;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740146.1;gene_id=Cattle_Y_G00594;transcript_id=Cattle_Y_T00862;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	34665835	34672490	.	+	.	ID=Cattle_Y_G00595;Dbxref=GeneID:789301;Name=LOC789301;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC789301;gene_biotype=protein_coding;gene_id=Cattle_Y_G00595;source_id=gene-LOC789301
haplotype2-0000357	CAT	mRNA	34665835	34672490	.	+	.	ID=Cattle_Y_T00863;Parent=Cattle_Y_G00595;Dbxref=GeneID:789301,GenBank:XM_059884192.1;Name=XM_059884192.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC789301;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C 2 long SRA reads%2C and 99%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X1;transcript_id=Cattle_Y_T00863;gene_id=Cattle_Y_G00595;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884192.1
haplotype2-0000357	CAT	exon	34665835	34667911	.	+	.	ID=Cattle_Y_E01277;Parent=Cattle_Y_T00863;Dbxref=GeneID:789301,GenBank:XM_059884192.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC789301;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00863;gene_id=Cattle_Y_G00595;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884192.1-1
haplotype2-0000357	CAT	exon	34669234	34669556	.	+	.	ID=Cattle_Y_E01278;Parent=Cattle_Y_T00863;Dbxref=GeneID:789301,GenBank:XM_059884192.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC789301;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00863;gene_id=Cattle_Y_G00595;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884192.1-1
haplotype2-0000357	CAT	exon	34669836	34670441	.	+	.	ID=Cattle_Y_E01279;Parent=Cattle_Y_T00863;Dbxref=GeneID:789301,GenBank:XM_059884192.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC789301;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00863;gene_id=Cattle_Y_G00595;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884192.1-1
haplotype2-0000357	CAT	exon	34671603	34672490	.	+	.	ID=Cattle_Y_E01280;Parent=Cattle_Y_T00863;Dbxref=GeneID:789301,GenBank:XM_059884192.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC789301;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00863;gene_id=Cattle_Y_G00595;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884192.1-4
haplotype2-0000357	CAT	CDS	34667762	34667911	.	+	0	ID=Cattle_Y_C00987;Parent=Cattle_Y_T00863;gene_id=Cattle_Y_G00595;transcript_id=Cattle_Y_T00863;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34669234	34669556	.	+	0	ID=Cattle_Y_C00988;Parent=Cattle_Y_T00863;gene_id=Cattle_Y_G00595;transcript_id=Cattle_Y_T00863;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34669836	34670441	.	+	1	ID=Cattle_Y_C00989;Parent=Cattle_Y_T00863;gene_id=Cattle_Y_G00595;transcript_id=Cattle_Y_T00863;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34671603	34672179	.	+	1	ID=Cattle_Y_C00990;Parent=Cattle_Y_T00863;gene_id=Cattle_Y_G00595;transcript_id=Cattle_Y_T00863;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34665835	34672490	.	+	.	ID=Cattle_Y_T00864;Parent=Cattle_Y_G00595;Dbxref=GeneID:789301,GenBank:XM_059884193.1;Name=XM_059884193.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC789301;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C 2 long SRA reads%2C and 99%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X2;transcript_id=Cattle_Y_T00864;gene_id=Cattle_Y_G00595;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884193.1
haplotype2-0000357	CAT	exon	34665835	34666455	.	+	.	ID=Cattle_Y_E01281;Parent=Cattle_Y_T00864;Dbxref=GeneID:789301,GenBank:XM_059884193.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC789301;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00864;gene_id=Cattle_Y_G00595;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884193.1-1
haplotype2-0000357	CAT	exon	34667845	34667911	.	+	.	ID=Cattle_Y_E01282;Parent=Cattle_Y_T00864;Dbxref=GeneID:789301,GenBank:XM_059884193.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC789301;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00864;gene_id=Cattle_Y_G00595;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884193.1-2
haplotype2-0000357	CAT	exon	34669234	34669556	.	+	.	ID=Cattle_Y_E01283;Parent=Cattle_Y_T00864;Dbxref=GeneID:789301,GenBank:XM_059884193.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC789301;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00864;gene_id=Cattle_Y_G00595;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884193.1-1
haplotype2-0000357	CAT	exon	34669836	34670441	.	+	.	ID=Cattle_Y_E01284;Parent=Cattle_Y_T00864;Dbxref=GeneID:789301,GenBank:XM_059884193.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC789301;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00864;gene_id=Cattle_Y_G00595;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884193.1-1
haplotype2-0000357	CAT	exon	34671603	34672490	.	+	.	ID=Cattle_Y_E01285;Parent=Cattle_Y_T00864;Dbxref=GeneID:789301,GenBank:XM_059884193.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC789301;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00864;gene_id=Cattle_Y_G00595;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884193.1-5
haplotype2-0000357	CAT	CDS	34667876	34667911	.	+	0	ID=Cattle_Y_C00991;Parent=Cattle_Y_T00864;gene_id=Cattle_Y_G00595;transcript_id=Cattle_Y_T00864;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34669234	34669556	.	+	0	ID=Cattle_Y_C00992;Parent=Cattle_Y_T00864;gene_id=Cattle_Y_G00595;transcript_id=Cattle_Y_T00864;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34669836	34670441	.	+	1	ID=Cattle_Y_C00993;Parent=Cattle_Y_T00864;gene_id=Cattle_Y_G00595;transcript_id=Cattle_Y_T00864;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34671603	34672179	.	+	1	ID=Cattle_Y_C00994;Parent=Cattle_Y_T00864;gene_id=Cattle_Y_G00595;transcript_id=Cattle_Y_T00864;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	34681513	34693837	.	+	.	ID=Cattle_Y_G00596;Dbxref=BGD:BT13944,GeneID:785023;Name=LOC785023;description=preferentially expressed antigen in melanoma;gbkey=Gene;gene=LOC785023;gene_biotype=protein_coding;gene_synonym=PRAME;gene_id=Cattle_Y_G00596;source_id=gene-LOC785023
haplotype2-0000357	CAT	mRNA	34688329	34693837	.	+	.	ID=Cattle_Y_T00865;Parent=Cattle_Y_G00596;Dbxref=GeneID:785023,GenBank:NM_001245953.1,BGD:BT13944;Name=NM_001245953.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC785023;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001245953.1;product=preferentially expressed antigen in melanoma;transcript_id=Cattle_Y_T00865;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001245953.1
haplotype2-0000357	CAT	exon	34688329	34689258	.	+	.	ID=Cattle_Y_E01286;Parent=Cattle_Y_T00865;Dbxref=GeneID:785023,GenBank:NM_001245953.1,BGD:BT13944;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC785023;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001245953.1;product=preferentially expressed antigen in melanoma;transcript_id=Cattle_Y_T00865;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001245953.1-1
haplotype2-0000357	CAT	exon	34690581	34690903	.	+	.	ID=Cattle_Y_E01287;Parent=Cattle_Y_T00865;Dbxref=GeneID:785023,GenBank:NM_001245953.1,BGD:BT13944;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC785023;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001245953.1;product=preferentially expressed antigen in melanoma;transcript_id=Cattle_Y_T00865;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001245953.1-2
haplotype2-0000357	CAT	exon	34691183	34691788	.	+	.	ID=Cattle_Y_E01288;Parent=Cattle_Y_T00865;Dbxref=GeneID:785023,GenBank:NM_001245953.1,BGD:BT13944;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC785023;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001245953.1;product=preferentially expressed antigen in melanoma;transcript_id=Cattle_Y_T00865;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001245953.1-3
haplotype2-0000357	CAT	exon	34692950	34693837	.	+	.	ID=Cattle_Y_E01289;Parent=Cattle_Y_T00865;Dbxref=GeneID:785023,GenBank:NM_001245953.1,BGD:BT13944;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC785023;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001245953.1;product=preferentially expressed antigen in melanoma;transcript_id=Cattle_Y_T00865;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001245953.1-4
haplotype2-0000357	CAT	CDS	34689223	34689258	.	+	0	ID=Cattle_Y_C00995;Parent=Cattle_Y_T00865;Dbxref=GeneID:785023,GenBank:NP_001232882.1,BGD:BT13944;Name=NP_001232882.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=LOC785023;inference=similar to AA sequence (same species):RefSeq:NP_001232882.1;product=melanoma antigen preferentially expressed in tumors;protein_id=NP_001232882.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00865;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34690581	34690903	.	+	0	ID=Cattle_Y_C00996;Parent=Cattle_Y_T00865;Dbxref=GeneID:785023,GenBank:NP_001232882.1,BGD:BT13944;Name=NP_001232882.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=LOC785023;inference=similar to AA sequence (same species):RefSeq:NP_001232882.1;product=melanoma antigen preferentially expressed in tumors;protein_id=NP_001232882.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00865;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34691183	34691788	.	+	1	ID=Cattle_Y_C00997;Parent=Cattle_Y_T00865;Dbxref=GeneID:785023,GenBank:NP_001232882.1,BGD:BT13944;Name=NP_001232882.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=LOC785023;inference=similar to AA sequence (same species):RefSeq:NP_001232882.1;product=melanoma antigen preferentially expressed in tumors;protein_id=NP_001232882.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00865;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34692950	34693526	.	+	1	ID=Cattle_Y_C00998;Parent=Cattle_Y_T00865;Dbxref=GeneID:785023,GenBank:NP_001232882.1,BGD:BT13944;Name=NP_001232882.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=LOC785023;inference=similar to AA sequence (same species):RefSeq:NP_001232882.1;product=melanoma antigen preferentially expressed in tumors;protein_id=NP_001232882.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00865;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34681513	34693837	.	+	.	ID=Cattle_Y_T00866;Parent=Cattle_Y_G00596;Dbxref=GeneID:785023,GenBank:XM_059883988.1,BGD:BT13944;Name=XM_059883988.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;model_evidence=Supporting evidence includes similarity to: 2 mRNAs%2C 1 EST%2C 14 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=preferentially expressed antigen in melanoma%2C transcript variant X1;transcript_id=Cattle_Y_T00866;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883988.1
haplotype2-0000357	CAT	exon	34681513	34681700	.	+	.	ID=Cattle_Y_E01290;Parent=Cattle_Y_T00866;Dbxref=GeneID:785023,GenBank:XM_059883988.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X1;transcript_id=Cattle_Y_T00866;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883988.1-1
haplotype2-0000357	CAT	exon	34682242	34682349	.	+	.	ID=Cattle_Y_E01291;Parent=Cattle_Y_T00866;Dbxref=GeneID:785023,GenBank:XM_059883988.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X1;transcript_id=Cattle_Y_T00866;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883988.1-2
haplotype2-0000357	CAT	exon	34689192	34689258	.	+	.	ID=Cattle_Y_E01292;Parent=Cattle_Y_T00866;Dbxref=GeneID:785023,GenBank:XM_059883988.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X1;transcript_id=Cattle_Y_T00866;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883988.1-3
haplotype2-0000357	CAT	exon	34690581	34690903	.	+	.	ID=Cattle_Y_E01293;Parent=Cattle_Y_T00866;Dbxref=GeneID:785023,GenBank:XM_059883988.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X1;transcript_id=Cattle_Y_T00866;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883988.1-4
haplotype2-0000357	CAT	exon	34691183	34691788	.	+	.	ID=Cattle_Y_E01294;Parent=Cattle_Y_T00866;Dbxref=GeneID:785023,GenBank:XM_059883988.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X1;transcript_id=Cattle_Y_T00866;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883988.1-5
haplotype2-0000357	CAT	exon	34692950	34693837	.	+	.	ID=Cattle_Y_E01295;Parent=Cattle_Y_T00866;Dbxref=GeneID:785023,GenBank:XM_059883988.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X1;transcript_id=Cattle_Y_T00866;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883988.1-6
haplotype2-0000357	CAT	CDS	34689223	34689258	.	+	0	ID=Cattle_Y_C00999;Parent=Cattle_Y_T00866;Dbxref=GeneID:785023,GenBank:XP_059739971.1,BGD:BT13944;Name=XP_059739971.1;gbkey=CDS;gene=LOC785023;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059739971.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00866;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34690581	34690903	.	+	0	ID=Cattle_Y_C01000;Parent=Cattle_Y_T00866;Dbxref=GeneID:785023,GenBank:XP_059739971.1,BGD:BT13944;Name=XP_059739971.1;gbkey=CDS;gene=LOC785023;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059739971.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00866;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34691183	34691788	.	+	1	ID=Cattle_Y_C01001;Parent=Cattle_Y_T00866;Dbxref=GeneID:785023,GenBank:XP_059739971.1,BGD:BT13944;Name=XP_059739971.1;gbkey=CDS;gene=LOC785023;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059739971.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00866;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34692950	34693526	.	+	1	ID=Cattle_Y_C01002;Parent=Cattle_Y_T00866;Dbxref=GeneID:785023,GenBank:XP_059739971.1,BGD:BT13944;Name=XP_059739971.1;gbkey=CDS;gene=LOC785023;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059739971.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00866;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34681798	34693837	.	+	.	ID=Cattle_Y_T00867;Parent=Cattle_Y_G00596;Dbxref=GeneID:785023,GenBank:XM_059883989.1,BGD:BT13944;Name=XM_059883989.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;model_evidence=Supporting evidence includes similarity to: 2 mRNAs%2C 1 EST%2C 14 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=preferentially expressed antigen in melanoma%2C transcript variant X2;transcript_id=Cattle_Y_T00867;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883989.1
haplotype2-0000357	CAT	exon	34681798	34682017	.	+	.	ID=Cattle_Y_E01296;Parent=Cattle_Y_T00867;Dbxref=GeneID:785023,GenBank:XM_059883989.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X2;transcript_id=Cattle_Y_T00867;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883989.1-1
haplotype2-0000357	CAT	exon	34682242	34682349	.	+	.	ID=Cattle_Y_E01297;Parent=Cattle_Y_T00867;Dbxref=GeneID:785023,GenBank:XM_059883989.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X2;transcript_id=Cattle_Y_T00867;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883989.1-2
haplotype2-0000357	CAT	exon	34689192	34689258	.	+	.	ID=Cattle_Y_E01298;Parent=Cattle_Y_T00867;Dbxref=GeneID:785023,GenBank:XM_059883989.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X2;transcript_id=Cattle_Y_T00867;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883989.1-3
haplotype2-0000357	CAT	exon	34690581	34690903	.	+	.	ID=Cattle_Y_E01299;Parent=Cattle_Y_T00867;Dbxref=GeneID:785023,GenBank:XM_059883989.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X2;transcript_id=Cattle_Y_T00867;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883989.1-4
haplotype2-0000357	CAT	exon	34691183	34691788	.	+	.	ID=Cattle_Y_E01300;Parent=Cattle_Y_T00867;Dbxref=GeneID:785023,GenBank:XM_059883989.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X2;transcript_id=Cattle_Y_T00867;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883989.1-5
haplotype2-0000357	CAT	exon	34692950	34693837	.	+	.	ID=Cattle_Y_E01301;Parent=Cattle_Y_T00867;Dbxref=GeneID:785023,GenBank:XM_059883989.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X2;transcript_id=Cattle_Y_T00867;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883989.1-6
haplotype2-0000357	CAT	CDS	34689223	34689258	.	+	0	ID=Cattle_Y_C01003;Parent=Cattle_Y_T00867;Dbxref=GeneID:785023,GenBank:XP_059739972.1,BGD:BT13944;Name=XP_059739972.1;gbkey=CDS;gene=LOC785023;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059739972.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00867;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34690581	34690903	.	+	0	ID=Cattle_Y_C01004;Parent=Cattle_Y_T00867;Dbxref=GeneID:785023,GenBank:XP_059739972.1,BGD:BT13944;Name=XP_059739972.1;gbkey=CDS;gene=LOC785023;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059739972.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00867;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34691183	34691788	.	+	1	ID=Cattle_Y_C01005;Parent=Cattle_Y_T00867;Dbxref=GeneID:785023,GenBank:XP_059739972.1,BGD:BT13944;Name=XP_059739972.1;gbkey=CDS;gene=LOC785023;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059739972.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00867;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34692950	34693526	.	+	1	ID=Cattle_Y_C01006;Parent=Cattle_Y_T00867;Dbxref=GeneID:785023,GenBank:XP_059739972.1,BGD:BT13944;Name=XP_059739972.1;gbkey=CDS;gene=LOC785023;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059739972.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00867;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34681513	34693837	.	+	.	ID=Cattle_Y_T00868;Parent=Cattle_Y_G00596;Dbxref=GeneID:785023,GenBank:XM_059883990.1,BGD:BT13944;Name=XM_059883990.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;model_evidence=Supporting evidence includes similarity to: 2 mRNAs%2C 1 EST%2C 14 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=preferentially expressed antigen in melanoma%2C transcript variant X3;transcript_id=Cattle_Y_T00868;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883990.1
haplotype2-0000357	CAT	exon	34681513	34681737	.	+	.	ID=Cattle_Y_E01302;Parent=Cattle_Y_T00868;Dbxref=GeneID:785023,GenBank:XM_059883990.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X3;transcript_id=Cattle_Y_T00868;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883990.1-1
haplotype2-0000357	CAT	exon	34682242	34682349	.	+	.	ID=Cattle_Y_E01303;Parent=Cattle_Y_T00868;Dbxref=GeneID:785023,GenBank:XM_059883990.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X3;transcript_id=Cattle_Y_T00868;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883990.1-2
haplotype2-0000357	CAT	exon	34689192	34689258	.	+	.	ID=Cattle_Y_E01304;Parent=Cattle_Y_T00868;Dbxref=GeneID:785023,GenBank:XM_059883990.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X3;transcript_id=Cattle_Y_T00868;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883990.1-3
haplotype2-0000357	CAT	exon	34690581	34690903	.	+	.	ID=Cattle_Y_E01305;Parent=Cattle_Y_T00868;Dbxref=GeneID:785023,GenBank:XM_059883990.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X3;transcript_id=Cattle_Y_T00868;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883990.1-4
haplotype2-0000357	CAT	exon	34691183	34691788	.	+	.	ID=Cattle_Y_E01306;Parent=Cattle_Y_T00868;Dbxref=GeneID:785023,GenBank:XM_059883990.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X3;transcript_id=Cattle_Y_T00868;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883990.1-5
haplotype2-0000357	CAT	exon	34692950	34693837	.	+	.	ID=Cattle_Y_E01307;Parent=Cattle_Y_T00868;Dbxref=GeneID:785023,GenBank:XM_059883990.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X3;transcript_id=Cattle_Y_T00868;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883990.1-6
haplotype2-0000357	CAT	CDS	34689223	34689258	.	+	0	ID=Cattle_Y_C01007;Parent=Cattle_Y_T00868;Dbxref=GeneID:785023,GenBank:XP_059739973.1,BGD:BT13944;Name=XP_059739973.1;gbkey=CDS;gene=LOC785023;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059739973.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00868;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34690581	34690903	.	+	0	ID=Cattle_Y_C01008;Parent=Cattle_Y_T00868;Dbxref=GeneID:785023,GenBank:XP_059739973.1,BGD:BT13944;Name=XP_059739973.1;gbkey=CDS;gene=LOC785023;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059739973.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00868;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34691183	34691788	.	+	1	ID=Cattle_Y_C01009;Parent=Cattle_Y_T00868;Dbxref=GeneID:785023,GenBank:XP_059739973.1,BGD:BT13944;Name=XP_059739973.1;gbkey=CDS;gene=LOC785023;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059739973.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00868;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34692950	34693526	.	+	1	ID=Cattle_Y_C01010;Parent=Cattle_Y_T00868;Dbxref=GeneID:785023,GenBank:XP_059739973.1,BGD:BT13944;Name=XP_059739973.1;gbkey=CDS;gene=LOC785023;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059739973.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00868;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34681798	34693837	.	+	.	ID=Cattle_Y_T00869;Parent=Cattle_Y_G00596;Dbxref=GeneID:785023,GenBank:XM_059883991.1,BGD:BT13944;Name=XM_059883991.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;model_evidence=Supporting evidence includes similarity to: 2 mRNAs%2C 1 EST%2C 14 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=preferentially expressed antigen in melanoma%2C transcript variant X4;transcript_id=Cattle_Y_T00869;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883991.1
haplotype2-0000357	CAT	exon	34681798	34681963	.	+	.	ID=Cattle_Y_E01308;Parent=Cattle_Y_T00869;Dbxref=GeneID:785023,GenBank:XM_059883991.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X4;transcript_id=Cattle_Y_T00869;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883991.1-1
haplotype2-0000357	CAT	exon	34682242	34682349	.	+	.	ID=Cattle_Y_E01309;Parent=Cattle_Y_T00869;Dbxref=GeneID:785023,GenBank:XM_059883991.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X4;transcript_id=Cattle_Y_T00869;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883991.1-2
haplotype2-0000357	CAT	exon	34689192	34689258	.	+	.	ID=Cattle_Y_E01310;Parent=Cattle_Y_T00869;Dbxref=GeneID:785023,GenBank:XM_059883991.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X4;transcript_id=Cattle_Y_T00869;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883991.1-3
haplotype2-0000357	CAT	exon	34690581	34690903	.	+	.	ID=Cattle_Y_E01311;Parent=Cattle_Y_T00869;Dbxref=GeneID:785023,GenBank:XM_059883991.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X4;transcript_id=Cattle_Y_T00869;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883991.1-4
haplotype2-0000357	CAT	exon	34691183	34691788	.	+	.	ID=Cattle_Y_E01312;Parent=Cattle_Y_T00869;Dbxref=GeneID:785023,GenBank:XM_059883991.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X4;transcript_id=Cattle_Y_T00869;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883991.1-5
haplotype2-0000357	CAT	exon	34692950	34693837	.	+	.	ID=Cattle_Y_E01313;Parent=Cattle_Y_T00869;Dbxref=GeneID:785023,GenBank:XM_059883991.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X4;transcript_id=Cattle_Y_T00869;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883991.1-6
haplotype2-0000357	CAT	CDS	34689223	34689258	.	+	0	ID=Cattle_Y_C01011;Parent=Cattle_Y_T00869;Dbxref=GeneID:785023,GenBank:XP_059739974.1,BGD:BT13944;Name=XP_059739974.1;gbkey=CDS;gene=LOC785023;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059739974.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00869;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34690581	34690903	.	+	0	ID=Cattle_Y_C01012;Parent=Cattle_Y_T00869;Dbxref=GeneID:785023,GenBank:XP_059739974.1,BGD:BT13944;Name=XP_059739974.1;gbkey=CDS;gene=LOC785023;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059739974.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00869;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34691183	34691788	.	+	1	ID=Cattle_Y_C01013;Parent=Cattle_Y_T00869;Dbxref=GeneID:785023,GenBank:XP_059739974.1,BGD:BT13944;Name=XP_059739974.1;gbkey=CDS;gene=LOC785023;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059739974.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00869;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34692950	34693526	.	+	1	ID=Cattle_Y_C01014;Parent=Cattle_Y_T00869;Dbxref=GeneID:785023,GenBank:XP_059739974.1,BGD:BT13944;Name=XP_059739974.1;gbkey=CDS;gene=LOC785023;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059739974.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00869;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34681513	34693837	.	+	.	ID=Cattle_Y_T00870;Parent=Cattle_Y_G00596;Dbxref=GeneID:785023,GenBank:XM_059883992.1,BGD:BT13944;Name=XM_059883992.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;model_evidence=Supporting evidence includes similarity to: 2 mRNAs%2C 1 EST%2C 14 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=preferentially expressed antigen in melanoma%2C transcript variant X5;transcript_id=Cattle_Y_T00870;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883992.1
haplotype2-0000357	CAT	exon	34681513	34681700	.	+	.	ID=Cattle_Y_E01314;Parent=Cattle_Y_T00870;Dbxref=GeneID:785023,GenBank:XM_059883992.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X5;transcript_id=Cattle_Y_T00870;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883992.1-1
haplotype2-0000357	CAT	exon	34682242	34682349	.	+	.	ID=Cattle_Y_E01315;Parent=Cattle_Y_T00870;Dbxref=GeneID:785023,GenBank:XM_059883992.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X5;transcript_id=Cattle_Y_T00870;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883992.1-2
haplotype2-0000357	CAT	exon	34687572	34687802	.	+	.	ID=Cattle_Y_E01316;Parent=Cattle_Y_T00870;Dbxref=GeneID:785023,GenBank:XM_059883992.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X5;transcript_id=Cattle_Y_T00870;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883992.1-3
haplotype2-0000357	CAT	exon	34689192	34689258	.	+	.	ID=Cattle_Y_E01317;Parent=Cattle_Y_T00870;Dbxref=GeneID:785023,GenBank:XM_059883992.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X5;transcript_id=Cattle_Y_T00870;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883992.1-4
haplotype2-0000357	CAT	exon	34690581	34690903	.	+	.	ID=Cattle_Y_E01318;Parent=Cattle_Y_T00870;Dbxref=GeneID:785023,GenBank:XM_059883992.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X5;transcript_id=Cattle_Y_T00870;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883992.1-5
haplotype2-0000357	CAT	exon	34691183	34691788	.	+	.	ID=Cattle_Y_E01319;Parent=Cattle_Y_T00870;Dbxref=GeneID:785023,GenBank:XM_059883992.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X5;transcript_id=Cattle_Y_T00870;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883992.1-6
haplotype2-0000357	CAT	exon	34692950	34693837	.	+	.	ID=Cattle_Y_E01320;Parent=Cattle_Y_T00870;Dbxref=GeneID:785023,GenBank:XM_059883992.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X5;transcript_id=Cattle_Y_T00870;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883992.1-7
haplotype2-0000357	CAT	CDS	34689223	34689258	.	+	0	ID=Cattle_Y_C01015;Parent=Cattle_Y_T00870;Dbxref=GeneID:785023,GenBank:XP_059739975.1,BGD:BT13944;Name=XP_059739975.1;gbkey=CDS;gene=LOC785023;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059739975.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00870;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34690581	34690903	.	+	0	ID=Cattle_Y_C01016;Parent=Cattle_Y_T00870;Dbxref=GeneID:785023,GenBank:XP_059739975.1,BGD:BT13944;Name=XP_059739975.1;gbkey=CDS;gene=LOC785023;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059739975.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00870;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34691183	34691788	.	+	1	ID=Cattle_Y_C01017;Parent=Cattle_Y_T00870;Dbxref=GeneID:785023,GenBank:XP_059739975.1,BGD:BT13944;Name=XP_059739975.1;gbkey=CDS;gene=LOC785023;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059739975.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00870;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34692950	34693526	.	+	1	ID=Cattle_Y_C01018;Parent=Cattle_Y_T00870;Dbxref=GeneID:785023,GenBank:XP_059739975.1,BGD:BT13944;Name=XP_059739975.1;gbkey=CDS;gene=LOC785023;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059739975.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00870;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34681514	34693837	.	+	.	ID=Cattle_Y_T00871;Parent=Cattle_Y_G00596;Dbxref=GeneID:785023,GenBank:XM_059883993.1,BGD:BT13944;Name=XM_059883993.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 12 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=preferentially expressed antigen in melanoma%2C transcript variant X6;transcript_id=Cattle_Y_T00871;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883993.1
haplotype2-0000357	CAT	exon	34681514	34681700	.	+	.	ID=Cattle_Y_E01321;Parent=Cattle_Y_T00871;Dbxref=GeneID:785023,GenBank:XM_059883993.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X6;transcript_id=Cattle_Y_T00871;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883993.1-1
haplotype2-0000357	CAT	exon	34682242	34682349	.	+	.	ID=Cattle_Y_E01322;Parent=Cattle_Y_T00871;Dbxref=GeneID:785023,GenBank:XM_059883993.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X6;transcript_id=Cattle_Y_T00871;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883993.1-2
haplotype2-0000357	CAT	exon	34690581	34690903	.	+	.	ID=Cattle_Y_E01323;Parent=Cattle_Y_T00871;Dbxref=GeneID:785023,GenBank:XM_059883993.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X6;transcript_id=Cattle_Y_T00871;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883993.1-3
haplotype2-0000357	CAT	exon	34691183	34691788	.	+	.	ID=Cattle_Y_E01324;Parent=Cattle_Y_T00871;Dbxref=GeneID:785023,GenBank:XM_059883993.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X6;transcript_id=Cattle_Y_T00871;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883993.1-4
haplotype2-0000357	CAT	exon	34692950	34693837	.	+	.	ID=Cattle_Y_E01325;Parent=Cattle_Y_T00871;Dbxref=GeneID:785023,GenBank:XM_059883993.1,BGD:BT13944;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC785023;product=preferentially expressed antigen in melanoma, transcript variant X6;transcript_id=Cattle_Y_T00871;gene_id=Cattle_Y_G00596;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883993.1-5
haplotype2-0000357	CAT	CDS	34690608	34690903	.	+	0	ID=Cattle_Y_C01019;Parent=Cattle_Y_T00871;Dbxref=GeneID:785023,GenBank:XP_059739976.1,BGD:BT13944;Name=XP_059739976.1;gbkey=CDS;gene=LOC785023;product=melanoma antigen preferentially expressed in tumors isoform X2;protein_id=XP_059739976.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00871;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34691183	34691788	.	+	1	ID=Cattle_Y_C01020;Parent=Cattle_Y_T00871;Dbxref=GeneID:785023,GenBank:XP_059739976.1,BGD:BT13944;Name=XP_059739976.1;gbkey=CDS;gene=LOC785023;product=melanoma antigen preferentially expressed in tumors isoform X2;protein_id=XP_059739976.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00871;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34692950	34693526	.	+	1	ID=Cattle_Y_C01021;Parent=Cattle_Y_T00871;Dbxref=GeneID:785023,GenBank:XP_059739976.1,BGD:BT13944;Name=XP_059739976.1;gbkey=CDS;gene=LOC785023;product=melanoma antigen preferentially expressed in tumors isoform X2;protein_id=XP_059739976.1;gene_id=Cattle_Y_G00596;transcript_id=Cattle_Y_T00871;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	34702848	34715176	.	+	.	ID=Cattle_Y_G00597;Dbxref=GeneID:132344520;Name=LOC132344520;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC132344520;gene_biotype=protein_coding;gene_id=Cattle_Y_G00597;source_id=gene-LOC132344520
haplotype2-0000357	CAT	mRNA	34702848	34715176	.	+	.	ID=Cattle_Y_T00872;Parent=Cattle_Y_G00597;Dbxref=GeneID:132344520,GenBank:XM_059884171.1;Name=XM_059884171.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;model_evidence=Supporting evidence includes similarity to: 14 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X1;transcript_id=Cattle_Y_T00872;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884171.1
haplotype2-0000357	CAT	exon	34702848	34703039	.	+	.	ID=Cattle_Y_E01326;Parent=Cattle_Y_T00872;Dbxref=GeneID:132344520,GenBank:XM_059884171.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00872;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884171.1-1
haplotype2-0000357	CAT	exon	34703581	34703688	.	+	.	ID=Cattle_Y_E01327;Parent=Cattle_Y_T00872;Dbxref=GeneID:132344520,GenBank:XM_059884171.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00872;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884171.1-2
haplotype2-0000357	CAT	exon	34710531	34710597	.	+	.	ID=Cattle_Y_E01328;Parent=Cattle_Y_T00872;Dbxref=GeneID:132344520,GenBank:XM_059884171.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00872;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884171.1-3
haplotype2-0000357	CAT	exon	34711920	34712242	.	+	.	ID=Cattle_Y_E01329;Parent=Cattle_Y_T00872;Dbxref=GeneID:132344520,GenBank:XM_059884171.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00872;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884171.1-1
haplotype2-0000357	CAT	exon	34712522	34713127	.	+	.	ID=Cattle_Y_E01330;Parent=Cattle_Y_T00872;Dbxref=GeneID:132344520,GenBank:XM_059884171.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00872;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884171.1-1
haplotype2-0000357	CAT	exon	34714289	34715176	.	+	.	ID=Cattle_Y_E01331;Parent=Cattle_Y_T00872;Dbxref=GeneID:132344520,GenBank:XM_059884171.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00872;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884171.1-6
haplotype2-0000357	CAT	CDS	34710562	34710597	.	+	0	ID=Cattle_Y_C01022;Parent=Cattle_Y_T00872;gene_id=Cattle_Y_G00597;transcript_id=Cattle_Y_T00872;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34711920	34712242	.	+	0	ID=Cattle_Y_C01023;Parent=Cattle_Y_T00872;gene_id=Cattle_Y_G00597;transcript_id=Cattle_Y_T00872;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34712522	34713127	.	+	1	ID=Cattle_Y_C01024;Parent=Cattle_Y_T00872;gene_id=Cattle_Y_G00597;transcript_id=Cattle_Y_T00872;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34714289	34714865	.	+	1	ID=Cattle_Y_C01025;Parent=Cattle_Y_T00872;gene_id=Cattle_Y_G00597;transcript_id=Cattle_Y_T00872;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34702848	34715176	.	+	.	ID=Cattle_Y_T00873;Parent=Cattle_Y_G00597;Dbxref=GeneID:132344520,GenBank:XM_059884172.1;Name=XM_059884172.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;model_evidence=Supporting evidence includes similarity to: 14 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X2;transcript_id=Cattle_Y_T00873;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884172.1
haplotype2-0000357	CAT	exon	34702848	34703076	.	+	.	ID=Cattle_Y_E01332;Parent=Cattle_Y_T00873;Dbxref=GeneID:132344520,GenBank:XM_059884172.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00873;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884172.1-1
haplotype2-0000357	CAT	exon	34703581	34703688	.	+	.	ID=Cattle_Y_E01333;Parent=Cattle_Y_T00873;Dbxref=GeneID:132344520,GenBank:XM_059884172.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00873;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884172.1-2
haplotype2-0000357	CAT	exon	34710531	34710597	.	+	.	ID=Cattle_Y_E01334;Parent=Cattle_Y_T00873;Dbxref=GeneID:132344520,GenBank:XM_059884172.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00873;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884172.1-3
haplotype2-0000357	CAT	exon	34711920	34712242	.	+	.	ID=Cattle_Y_E01335;Parent=Cattle_Y_T00873;Dbxref=GeneID:132344520,GenBank:XM_059884172.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00873;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884172.1-1
haplotype2-0000357	CAT	exon	34712522	34713127	.	+	.	ID=Cattle_Y_E01336;Parent=Cattle_Y_T00873;Dbxref=GeneID:132344520,GenBank:XM_059884172.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00873;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884172.1-1
haplotype2-0000357	CAT	exon	34714289	34715176	.	+	.	ID=Cattle_Y_E01337;Parent=Cattle_Y_T00873;Dbxref=GeneID:132344520,GenBank:XM_059884172.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00873;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884172.1-6
haplotype2-0000357	CAT	CDS	34710562	34710597	.	+	0	ID=Cattle_Y_C01026;Parent=Cattle_Y_T00873;gene_id=Cattle_Y_G00597;transcript_id=Cattle_Y_T00873;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34711920	34712242	.	+	0	ID=Cattle_Y_C01027;Parent=Cattle_Y_T00873;gene_id=Cattle_Y_G00597;transcript_id=Cattle_Y_T00873;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34712522	34713127	.	+	1	ID=Cattle_Y_C01028;Parent=Cattle_Y_T00873;gene_id=Cattle_Y_G00597;transcript_id=Cattle_Y_T00873;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34714289	34714865	.	+	1	ID=Cattle_Y_C01029;Parent=Cattle_Y_T00873;gene_id=Cattle_Y_G00597;transcript_id=Cattle_Y_T00873;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34703118	34715176	.	+	.	ID=Cattle_Y_T00874;Parent=Cattle_Y_G00597;Dbxref=GeneID:132344520,GenBank:XM_059884173.1;Name=XM_059884173.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;model_evidence=Supporting evidence includes similarity to: 14 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X3;transcript_id=Cattle_Y_T00874;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884173.1
haplotype2-0000357	CAT	exon	34703118	34703356	.	+	.	ID=Cattle_Y_E01338;Parent=Cattle_Y_T00874;Dbxref=GeneID:132344520,GenBank:XM_059884173.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00874;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884173.1-1
haplotype2-0000357	CAT	exon	34703581	34703688	.	+	.	ID=Cattle_Y_E01339;Parent=Cattle_Y_T00874;Dbxref=GeneID:132344520,GenBank:XM_059884173.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00874;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884173.1-2
haplotype2-0000357	CAT	exon	34710531	34710597	.	+	.	ID=Cattle_Y_E01340;Parent=Cattle_Y_T00874;Dbxref=GeneID:132344520,GenBank:XM_059884173.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00874;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884173.1-3
haplotype2-0000357	CAT	exon	34711920	34712242	.	+	.	ID=Cattle_Y_E01341;Parent=Cattle_Y_T00874;Dbxref=GeneID:132344520,GenBank:XM_059884173.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00874;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884173.1-1
haplotype2-0000357	CAT	exon	34712522	34713127	.	+	.	ID=Cattle_Y_E01342;Parent=Cattle_Y_T00874;Dbxref=GeneID:132344520,GenBank:XM_059884173.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00874;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884173.1-1
haplotype2-0000357	CAT	exon	34714289	34715176	.	+	.	ID=Cattle_Y_E01343;Parent=Cattle_Y_T00874;Dbxref=GeneID:132344520,GenBank:XM_059884173.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00874;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884173.1-6
haplotype2-0000357	CAT	CDS	34710562	34710597	.	+	0	ID=Cattle_Y_C01030;Parent=Cattle_Y_T00874;gene_id=Cattle_Y_G00597;transcript_id=Cattle_Y_T00874;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34711920	34712242	.	+	0	ID=Cattle_Y_C01031;Parent=Cattle_Y_T00874;gene_id=Cattle_Y_G00597;transcript_id=Cattle_Y_T00874;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34712522	34713127	.	+	1	ID=Cattle_Y_C01032;Parent=Cattle_Y_T00874;gene_id=Cattle_Y_G00597;transcript_id=Cattle_Y_T00874;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34714289	34714865	.	+	1	ID=Cattle_Y_C01033;Parent=Cattle_Y_T00874;gene_id=Cattle_Y_G00597;transcript_id=Cattle_Y_T00874;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34702848	34715176	.	+	.	ID=Cattle_Y_T00875;Parent=Cattle_Y_G00597;Dbxref=GeneID:132344520,GenBank:XM_059884174.1;Name=XM_059884174.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;model_evidence=Supporting evidence includes similarity to: 14 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X4;transcript_id=Cattle_Y_T00875;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884174.1
haplotype2-0000357	CAT	exon	34702848	34703039	.	+	.	ID=Cattle_Y_E01344;Parent=Cattle_Y_T00875;Dbxref=GeneID:132344520,GenBank:XM_059884174.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00875;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884174.1-1
haplotype2-0000357	CAT	exon	34703581	34703688	.	+	.	ID=Cattle_Y_E01345;Parent=Cattle_Y_T00875;Dbxref=GeneID:132344520,GenBank:XM_059884174.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00875;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884174.1-2
haplotype2-0000357	CAT	exon	34708911	34709141	.	+	.	ID=Cattle_Y_E01346;Parent=Cattle_Y_T00875;Dbxref=GeneID:132344520,GenBank:XM_059884174.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00875;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884174.1-3
haplotype2-0000357	CAT	exon	34710531	34710597	.	+	.	ID=Cattle_Y_E01347;Parent=Cattle_Y_T00875;Dbxref=GeneID:132344520,GenBank:XM_059884174.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00875;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884174.1-4
haplotype2-0000357	CAT	exon	34711920	34712242	.	+	.	ID=Cattle_Y_E01348;Parent=Cattle_Y_T00875;Dbxref=GeneID:132344520,GenBank:XM_059884174.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00875;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884174.1-1
haplotype2-0000357	CAT	exon	34712522	34713127	.	+	.	ID=Cattle_Y_E01349;Parent=Cattle_Y_T00875;Dbxref=GeneID:132344520,GenBank:XM_059884174.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00875;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884174.1-1
haplotype2-0000357	CAT	exon	34714289	34715176	.	+	.	ID=Cattle_Y_E01350;Parent=Cattle_Y_T00875;Dbxref=GeneID:132344520,GenBank:XM_059884174.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00875;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884174.1-7
haplotype2-0000357	CAT	CDS	34710562	34710597	.	+	0	ID=Cattle_Y_C01034;Parent=Cattle_Y_T00875;gene_id=Cattle_Y_G00597;transcript_id=Cattle_Y_T00875;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34711920	34712242	.	+	0	ID=Cattle_Y_C01035;Parent=Cattle_Y_T00875;gene_id=Cattle_Y_G00597;transcript_id=Cattle_Y_T00875;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34712522	34713127	.	+	1	ID=Cattle_Y_C01036;Parent=Cattle_Y_T00875;gene_id=Cattle_Y_G00597;transcript_id=Cattle_Y_T00875;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34714289	34714865	.	+	1	ID=Cattle_Y_C01037;Parent=Cattle_Y_T00875;gene_id=Cattle_Y_G00597;transcript_id=Cattle_Y_T00875;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34702848	34715176	.	+	.	ID=Cattle_Y_T00876;Parent=Cattle_Y_G00597;Dbxref=GeneID:132344520,GenBank:XM_059884175.1;Name=XM_059884175.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;model_evidence=Supporting evidence includes similarity to: 12 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X5;transcript_id=Cattle_Y_T00876;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884175.1
haplotype2-0000357	CAT	exon	34702848	34703039	.	+	.	ID=Cattle_Y_E01351;Parent=Cattle_Y_T00876;Dbxref=GeneID:132344520,GenBank:XM_059884175.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00876;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884175.1-1
haplotype2-0000357	CAT	exon	34703581	34703688	.	+	.	ID=Cattle_Y_E01352;Parent=Cattle_Y_T00876;Dbxref=GeneID:132344520,GenBank:XM_059884175.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00876;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884175.1-2
haplotype2-0000357	CAT	exon	34711920	34712242	.	+	.	ID=Cattle_Y_E01353;Parent=Cattle_Y_T00876;Dbxref=GeneID:132344520,GenBank:XM_059884175.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00876;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884175.1-3
haplotype2-0000357	CAT	exon	34712522	34713127	.	+	.	ID=Cattle_Y_E01354;Parent=Cattle_Y_T00876;Dbxref=GeneID:132344520,GenBank:XM_059884175.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00876;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884175.1-1
haplotype2-0000357	CAT	exon	34714289	34715176	.	+	.	ID=Cattle_Y_E01355;Parent=Cattle_Y_T00876;Dbxref=GeneID:132344520,GenBank:XM_059884175.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344520;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00876;gene_id=Cattle_Y_G00597;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884175.1-5
haplotype2-0000357	CAT	CDS	34711947	34712242	.	+	0	ID=Cattle_Y_C01038;Parent=Cattle_Y_T00876;gene_id=Cattle_Y_G00597;transcript_id=Cattle_Y_T00876;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34712522	34713127	.	+	1	ID=Cattle_Y_C01039;Parent=Cattle_Y_T00876;gene_id=Cattle_Y_G00597;transcript_id=Cattle_Y_T00876;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34714289	34714865	.	+	1	ID=Cattle_Y_C01040;Parent=Cattle_Y_T00876;gene_id=Cattle_Y_G00597;transcript_id=Cattle_Y_T00876;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	34724196	34736519	.	+	.	ID=Cattle_Y_G00598;Dbxref=GeneID:132344517;Name=LOC132344517;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC132344517;gene_biotype=protein_coding;gene_id=Cattle_Y_G00598;source_id=gene-LOC132344517
haplotype2-0000357	CAT	mRNA	34724196	34736519	.	+	.	ID=Cattle_Y_T00877;Parent=Cattle_Y_G00598;Dbxref=GeneID:132344517,GenBank:XM_059884152.1;Name=XM_059884152.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;model_evidence=Supporting evidence includes similarity to: 1 mRNA%2C 1 EST%2C 15 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X1;transcript_id=Cattle_Y_T00877;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884152.1
haplotype2-0000357	CAT	exon	34724196	34724383	.	+	.	ID=Cattle_Y_E01356;Parent=Cattle_Y_T00877;Dbxref=GeneID:132344517,GenBank:XM_059884152.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00877;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884152.1-1
haplotype2-0000357	CAT	exon	34724925	34725032	.	+	.	ID=Cattle_Y_E01357;Parent=Cattle_Y_T00877;Dbxref=GeneID:132344517,GenBank:XM_059884152.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00877;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884152.1-2
haplotype2-0000357	CAT	exon	34731874	34731940	.	+	.	ID=Cattle_Y_E01358;Parent=Cattle_Y_T00877;Dbxref=GeneID:132344517,GenBank:XM_059884152.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00877;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884152.1-3
haplotype2-0000357	CAT	exon	34733263	34733585	.	+	.	ID=Cattle_Y_E01359;Parent=Cattle_Y_T00877;Dbxref=GeneID:132344517,GenBank:XM_059884152.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00877;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884152.1-4
haplotype2-0000357	CAT	exon	34733865	34734470	.	+	.	ID=Cattle_Y_E01360;Parent=Cattle_Y_T00877;Dbxref=GeneID:132344517,GenBank:XM_059884152.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00877;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884152.1-5
haplotype2-0000357	CAT	exon	34735632	34736519	.	+	.	ID=Cattle_Y_E01361;Parent=Cattle_Y_T00877;Dbxref=GeneID:132344517,GenBank:XM_059884152.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00877;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884152.1-6
haplotype2-0000357	CAT	CDS	34731905	34731940	.	+	0	ID=Cattle_Y_C01041;Parent=Cattle_Y_T00877;Dbxref=GeneID:132344517,GenBank:XP_059740135.1;Name=XP_059740135.1;gbkey=CDS;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740135.1;gene_id=Cattle_Y_G00598;transcript_id=Cattle_Y_T00877;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34733263	34733585	.	+	0	ID=Cattle_Y_C01042;Parent=Cattle_Y_T00877;Dbxref=GeneID:132344517,GenBank:XP_059740135.1;Name=XP_059740135.1;gbkey=CDS;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740135.1;gene_id=Cattle_Y_G00598;transcript_id=Cattle_Y_T00877;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34733865	34734470	.	+	1	ID=Cattle_Y_C01043;Parent=Cattle_Y_T00877;Dbxref=GeneID:132344517,GenBank:XP_059740135.1;Name=XP_059740135.1;gbkey=CDS;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740135.1;gene_id=Cattle_Y_G00598;transcript_id=Cattle_Y_T00877;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34735632	34736208	.	+	1	ID=Cattle_Y_C01044;Parent=Cattle_Y_T00877;Dbxref=GeneID:132344517,GenBank:XP_059740135.1;Name=XP_059740135.1;gbkey=CDS;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740135.1;gene_id=Cattle_Y_G00598;transcript_id=Cattle_Y_T00877;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34724480	34736519	.	+	.	ID=Cattle_Y_T00878;Parent=Cattle_Y_G00598;Dbxref=GeneID:132344517,GenBank:XM_059884154.1;Name=XM_059884154.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;model_evidence=Supporting evidence includes similarity to: 1 mRNA%2C 1 EST%2C 15 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X2;transcript_id=Cattle_Y_T00878;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884154.1
haplotype2-0000357	CAT	exon	34724480	34724700	.	+	.	ID=Cattle_Y_E01362;Parent=Cattle_Y_T00878;Dbxref=GeneID:132344517,GenBank:XM_059884154.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00878;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884154.1-1
haplotype2-0000357	CAT	exon	34724925	34725032	.	+	.	ID=Cattle_Y_E01363;Parent=Cattle_Y_T00878;Dbxref=GeneID:132344517,GenBank:XM_059884154.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00878;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884154.1-2
haplotype2-0000357	CAT	exon	34731874	34731940	.	+	.	ID=Cattle_Y_E01364;Parent=Cattle_Y_T00878;Dbxref=GeneID:132344517,GenBank:XM_059884154.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00878;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884154.1-3
haplotype2-0000357	CAT	exon	34733263	34733585	.	+	.	ID=Cattle_Y_E01365;Parent=Cattle_Y_T00878;Dbxref=GeneID:132344517,GenBank:XM_059884154.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00878;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884154.1-4
haplotype2-0000357	CAT	exon	34733865	34734470	.	+	.	ID=Cattle_Y_E01366;Parent=Cattle_Y_T00878;Dbxref=GeneID:132344517,GenBank:XM_059884154.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00878;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884154.1-5
haplotype2-0000357	CAT	exon	34735632	34736519	.	+	.	ID=Cattle_Y_E01367;Parent=Cattle_Y_T00878;Dbxref=GeneID:132344517,GenBank:XM_059884154.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00878;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884154.1-6
haplotype2-0000357	CAT	CDS	34731905	34731940	.	+	0	ID=Cattle_Y_C01045;Parent=Cattle_Y_T00878;Dbxref=GeneID:132344517,GenBank:XP_059740137.1;Name=XP_059740137.1;gbkey=CDS;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740137.1;gene_id=Cattle_Y_G00598;transcript_id=Cattle_Y_T00878;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34733263	34733585	.	+	0	ID=Cattle_Y_C01046;Parent=Cattle_Y_T00878;Dbxref=GeneID:132344517,GenBank:XP_059740137.1;Name=XP_059740137.1;gbkey=CDS;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740137.1;gene_id=Cattle_Y_G00598;transcript_id=Cattle_Y_T00878;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34733865	34734470	.	+	1	ID=Cattle_Y_C01047;Parent=Cattle_Y_T00878;Dbxref=GeneID:132344517,GenBank:XP_059740137.1;Name=XP_059740137.1;gbkey=CDS;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740137.1;gene_id=Cattle_Y_G00598;transcript_id=Cattle_Y_T00878;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34735632	34736208	.	+	1	ID=Cattle_Y_C01048;Parent=Cattle_Y_T00878;Dbxref=GeneID:132344517,GenBank:XP_059740137.1;Name=XP_059740137.1;gbkey=CDS;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740137.1;gene_id=Cattle_Y_G00598;transcript_id=Cattle_Y_T00878;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34724196	34736519	.	+	.	ID=Cattle_Y_T00879;Parent=Cattle_Y_G00598;Dbxref=GeneID:132344517,GenBank:XM_059884155.1;Name=XM_059884155.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;model_evidence=Supporting evidence includes similarity to: 1 mRNA%2C 1 EST%2C 15 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X3;transcript_id=Cattle_Y_T00879;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884155.1
haplotype2-0000357	CAT	exon	34724196	34724420	.	+	.	ID=Cattle_Y_E01368;Parent=Cattle_Y_T00879;Dbxref=GeneID:132344517,GenBank:XM_059884155.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00879;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884155.1-1
haplotype2-0000357	CAT	exon	34724925	34725032	.	+	.	ID=Cattle_Y_E01369;Parent=Cattle_Y_T00879;Dbxref=GeneID:132344517,GenBank:XM_059884155.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00879;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884155.1-2
haplotype2-0000357	CAT	exon	34731874	34731940	.	+	.	ID=Cattle_Y_E01370;Parent=Cattle_Y_T00879;Dbxref=GeneID:132344517,GenBank:XM_059884155.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00879;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884155.1-3
haplotype2-0000357	CAT	exon	34733263	34733585	.	+	.	ID=Cattle_Y_E01371;Parent=Cattle_Y_T00879;Dbxref=GeneID:132344517,GenBank:XM_059884155.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00879;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884155.1-4
haplotype2-0000357	CAT	exon	34733865	34734470	.	+	.	ID=Cattle_Y_E01372;Parent=Cattle_Y_T00879;Dbxref=GeneID:132344517,GenBank:XM_059884155.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00879;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884155.1-5
haplotype2-0000357	CAT	exon	34735632	34736519	.	+	.	ID=Cattle_Y_E01373;Parent=Cattle_Y_T00879;Dbxref=GeneID:132344517,GenBank:XM_059884155.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X3;transcript_id=Cattle_Y_T00879;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884155.1-6
haplotype2-0000357	CAT	CDS	34731905	34731940	.	+	0	ID=Cattle_Y_C01049;Parent=Cattle_Y_T00879;Dbxref=GeneID:132344517,GenBank:XP_059740138.1;Name=XP_059740138.1;gbkey=CDS;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740138.1;gene_id=Cattle_Y_G00598;transcript_id=Cattle_Y_T00879;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34733263	34733585	.	+	0	ID=Cattle_Y_C01050;Parent=Cattle_Y_T00879;Dbxref=GeneID:132344517,GenBank:XP_059740138.1;Name=XP_059740138.1;gbkey=CDS;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740138.1;gene_id=Cattle_Y_G00598;transcript_id=Cattle_Y_T00879;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34733865	34734470	.	+	1	ID=Cattle_Y_C01051;Parent=Cattle_Y_T00879;Dbxref=GeneID:132344517,GenBank:XP_059740138.1;Name=XP_059740138.1;gbkey=CDS;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740138.1;gene_id=Cattle_Y_G00598;transcript_id=Cattle_Y_T00879;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34735632	34736208	.	+	1	ID=Cattle_Y_C01052;Parent=Cattle_Y_T00879;Dbxref=GeneID:132344517,GenBank:XP_059740138.1;Name=XP_059740138.1;gbkey=CDS;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740138.1;gene_id=Cattle_Y_G00598;transcript_id=Cattle_Y_T00879;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34724480	34736519	.	+	.	ID=Cattle_Y_T00880;Parent=Cattle_Y_G00598;Dbxref=GeneID:132344517,GenBank:XM_059884156.1;Name=XM_059884156.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;model_evidence=Supporting evidence includes similarity to: 1 mRNA%2C 1 EST%2C 15 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X4;transcript_id=Cattle_Y_T00880;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884156.1
haplotype2-0000357	CAT	exon	34724480	34724646	.	+	.	ID=Cattle_Y_E01374;Parent=Cattle_Y_T00880;Dbxref=GeneID:132344517,GenBank:XM_059884156.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00880;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884156.1-1
haplotype2-0000357	CAT	exon	34724925	34725032	.	+	.	ID=Cattle_Y_E01375;Parent=Cattle_Y_T00880;Dbxref=GeneID:132344517,GenBank:XM_059884156.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00880;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884156.1-2
haplotype2-0000357	CAT	exon	34731874	34731940	.	+	.	ID=Cattle_Y_E01376;Parent=Cattle_Y_T00880;Dbxref=GeneID:132344517,GenBank:XM_059884156.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00880;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884156.1-3
haplotype2-0000357	CAT	exon	34733263	34733585	.	+	.	ID=Cattle_Y_E01377;Parent=Cattle_Y_T00880;Dbxref=GeneID:132344517,GenBank:XM_059884156.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00880;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884156.1-4
haplotype2-0000357	CAT	exon	34733865	34734470	.	+	.	ID=Cattle_Y_E01378;Parent=Cattle_Y_T00880;Dbxref=GeneID:132344517,GenBank:XM_059884156.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00880;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884156.1-5
haplotype2-0000357	CAT	exon	34735632	34736519	.	+	.	ID=Cattle_Y_E01379;Parent=Cattle_Y_T00880;Dbxref=GeneID:132344517,GenBank:XM_059884156.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X4;transcript_id=Cattle_Y_T00880;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884156.1-6
haplotype2-0000357	CAT	CDS	34731905	34731940	.	+	0	ID=Cattle_Y_C01053;Parent=Cattle_Y_T00880;Dbxref=GeneID:132344517,GenBank:XP_059740139.1;Name=XP_059740139.1;gbkey=CDS;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740139.1;gene_id=Cattle_Y_G00598;transcript_id=Cattle_Y_T00880;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34733263	34733585	.	+	0	ID=Cattle_Y_C01054;Parent=Cattle_Y_T00880;Dbxref=GeneID:132344517,GenBank:XP_059740139.1;Name=XP_059740139.1;gbkey=CDS;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740139.1;gene_id=Cattle_Y_G00598;transcript_id=Cattle_Y_T00880;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34733865	34734470	.	+	1	ID=Cattle_Y_C01055;Parent=Cattle_Y_T00880;Dbxref=GeneID:132344517,GenBank:XP_059740139.1;Name=XP_059740139.1;gbkey=CDS;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740139.1;gene_id=Cattle_Y_G00598;transcript_id=Cattle_Y_T00880;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34735632	34736208	.	+	1	ID=Cattle_Y_C01056;Parent=Cattle_Y_T00880;Dbxref=GeneID:132344517,GenBank:XP_059740139.1;Name=XP_059740139.1;gbkey=CDS;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740139.1;gene_id=Cattle_Y_G00598;transcript_id=Cattle_Y_T00880;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34730302	34736519	.	+	.	ID=Cattle_Y_T00881;Parent=Cattle_Y_G00598;Dbxref=GeneID:132344517,GenBank:XM_059884157.1;Name=XM_059884157.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;model_evidence=Supporting evidence includes similarity to: 1 mRNA%2C 1 EST%2C 15 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X5;transcript_id=Cattle_Y_T00881;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884157.1
haplotype2-0000357	CAT	exon	34730302	34730484	.	+	.	ID=Cattle_Y_E01380;Parent=Cattle_Y_T00881;Dbxref=GeneID:132344517,GenBank:XM_059884157.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00881;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884157.1-1
haplotype2-0000357	CAT	exon	34731874	34731940	.	+	.	ID=Cattle_Y_E01381;Parent=Cattle_Y_T00881;Dbxref=GeneID:132344517,GenBank:XM_059884157.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00881;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884157.1-2
haplotype2-0000357	CAT	exon	34733263	34733585	.	+	.	ID=Cattle_Y_E01382;Parent=Cattle_Y_T00881;Dbxref=GeneID:132344517,GenBank:XM_059884157.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00881;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884157.1-3
haplotype2-0000357	CAT	exon	34733865	34734470	.	+	.	ID=Cattle_Y_E01383;Parent=Cattle_Y_T00881;Dbxref=GeneID:132344517,GenBank:XM_059884157.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00881;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884157.1-4
haplotype2-0000357	CAT	exon	34735632	34736519	.	+	.	ID=Cattle_Y_E01384;Parent=Cattle_Y_T00881;Dbxref=GeneID:132344517,GenBank:XM_059884157.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X5;transcript_id=Cattle_Y_T00881;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884157.1-5
haplotype2-0000357	CAT	CDS	34731905	34731940	.	+	0	ID=Cattle_Y_C01057;Parent=Cattle_Y_T00881;Dbxref=GeneID:132344517,GenBank:XP_059740140.1;Name=XP_059740140.1;gbkey=CDS;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740140.1;gene_id=Cattle_Y_G00598;transcript_id=Cattle_Y_T00881;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34733263	34733585	.	+	0	ID=Cattle_Y_C01058;Parent=Cattle_Y_T00881;Dbxref=GeneID:132344517,GenBank:XP_059740140.1;Name=XP_059740140.1;gbkey=CDS;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740140.1;gene_id=Cattle_Y_G00598;transcript_id=Cattle_Y_T00881;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34733865	34734470	.	+	1	ID=Cattle_Y_C01059;Parent=Cattle_Y_T00881;Dbxref=GeneID:132344517,GenBank:XP_059740140.1;Name=XP_059740140.1;gbkey=CDS;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740140.1;gene_id=Cattle_Y_G00598;transcript_id=Cattle_Y_T00881;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34735632	34736208	.	+	1	ID=Cattle_Y_C01060;Parent=Cattle_Y_T00881;Dbxref=GeneID:132344517,GenBank:XP_059740140.1;Name=XP_059740140.1;gbkey=CDS;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740140.1;gene_id=Cattle_Y_G00598;transcript_id=Cattle_Y_T00881;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	34724197	34736519	.	+	.	ID=Cattle_Y_T00882;Parent=Cattle_Y_G00598;Dbxref=GeneID:132344517,GenBank:XM_059884158.1;Name=XM_059884158.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;model_evidence=Supporting evidence includes similarity to: 1 mRNA%2C 1 EST%2C 13 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X6;transcript_id=Cattle_Y_T00882;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884158.1
haplotype2-0000357	CAT	exon	34724197	34724383	.	+	.	ID=Cattle_Y_E01385;Parent=Cattle_Y_T00882;Dbxref=GeneID:132344517,GenBank:XM_059884158.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X6;transcript_id=Cattle_Y_T00882;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884158.1-1
haplotype2-0000357	CAT	exon	34724925	34725032	.	+	.	ID=Cattle_Y_E01386;Parent=Cattle_Y_T00882;Dbxref=GeneID:132344517,GenBank:XM_059884158.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X6;transcript_id=Cattle_Y_T00882;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884158.1-2
haplotype2-0000357	CAT	exon	34733263	34733585	.	+	.	ID=Cattle_Y_E01387;Parent=Cattle_Y_T00882;Dbxref=GeneID:132344517,GenBank:XM_059884158.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X6;transcript_id=Cattle_Y_T00882;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884158.1-3
haplotype2-0000357	CAT	exon	34733865	34734470	.	+	.	ID=Cattle_Y_E01388;Parent=Cattle_Y_T00882;Dbxref=GeneID:132344517,GenBank:XM_059884158.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X6;transcript_id=Cattle_Y_T00882;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884158.1-4
haplotype2-0000357	CAT	exon	34735632	34736519	.	+	.	ID=Cattle_Y_E01389;Parent=Cattle_Y_T00882;Dbxref=GeneID:132344517,GenBank:XM_059884158.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X6;transcript_id=Cattle_Y_T00882;gene_id=Cattle_Y_G00598;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884158.1-5
haplotype2-0000357	CAT	CDS	34733290	34733585	.	+	0	ID=Cattle_Y_C01061;Parent=Cattle_Y_T00882;Dbxref=GeneID:132344517,GenBank:XP_059740141.1;Name=XP_059740141.1;gbkey=CDS;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740141.1;gene_id=Cattle_Y_G00598;transcript_id=Cattle_Y_T00882;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34733865	34734470	.	+	1	ID=Cattle_Y_C01062;Parent=Cattle_Y_T00882;Dbxref=GeneID:132344517,GenBank:XP_059740141.1;Name=XP_059740141.1;gbkey=CDS;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740141.1;gene_id=Cattle_Y_G00598;transcript_id=Cattle_Y_T00882;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34735632	34736208	.	+	1	ID=Cattle_Y_C01063;Parent=Cattle_Y_T00882;Dbxref=GeneID:132344517,GenBank:XP_059740141.1;Name=XP_059740141.1;gbkey=CDS;gene=LOC132344517;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740141.1;gene_id=Cattle_Y_G00598;transcript_id=Cattle_Y_T00882;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	34753846	34755575	.	-	.	ID=Cattle_Y_G00599;Dbxref=GeneID:132344662;Name=LOC132344662;description=heat shock transcription factor%2C Y-linked-like;end_range=25172099,.;gbkey=Gene;gene=LOC132344662;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00599;source_id=gene-LOC132344662
haplotype2-0000357	CAT	mRNA	34753846	34755575	.	-	.	ID=Cattle_Y_T00883;Parent=Cattle_Y_G00599;Dbxref=GeneID:132344662,GenBank:XM_059884306.1;Name=XM_059884306.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon;end_range=25172099,.;exception=unclassified transcription discrepancy;gbkey=mRNA;gene=LOC132344662;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 83%25 coverage of the annotated genomic feature by RNAseq alignments;partial=true;product=heat shock transcription factor%2C Y-linked-like;transcript_id=Cattle_Y_T00883;gene_id=Cattle_Y_G00599;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884306.1
haplotype2-0000357	CAT	exon	34753846	34754316	.	-	.	ID=Cattle_Y_E01390;Parent=Cattle_Y_T00883;Dbxref=GeneID:132344662,GenBank:XM_059884306.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon;end_range=25172099,.;exception=unclassified transcription discrepancy;gbkey=mRNA;gene=LOC132344662;partial=true;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00883;gene_id=Cattle_Y_G00599;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884306.1-3
haplotype2-0000357	CAT	exon	34754318	34754548	.	-	.	ID=Cattle_Y_E01391;Parent=Cattle_Y_T00883;Dbxref=GeneID:132344662,GenBank:XM_059884306.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon;exception=unclassified transcription discrepancy;gbkey=mRNA;gene=LOC132344662;partial=true;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00883;gene_id=Cattle_Y_G00599;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884306.1-2
haplotype2-0000357	CAT	exon	34755062	34755575	.	-	.	ID=Cattle_Y_E01392;Parent=Cattle_Y_T00883;Dbxref=GeneID:132344662,GenBank:XM_059884306.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon;exception=unclassified transcription discrepancy;gbkey=mRNA;gene=LOC132344662;partial=true;product=heat shock transcription factor, Y-linked-like;transcript_id=Cattle_Y_T00883;gene_id=Cattle_Y_G00599;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884306.1-1
haplotype2-0000357	CAT	CDS	34753846	34754316	.	-	0	ID=Cattle_Y_C01064;Parent=Cattle_Y_T00883;Dbxref=GeneID:132344662,GenBank:XP_059740289.1;Name=XP_059740289.1;Note=The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon;end_range=25172099,.;exception=unclassified translation discrepancy;gbkey=CDS;gene=LOC132344662;partial=true;product=LOW QUALITY PROTEIN: heat shock transcription factor, Y-linked-like;protein_id=XP_059740289.1;gene_id=Cattle_Y_G00599;transcript_id=Cattle_Y_T00883;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34754318	34754548	.	-	0	ID=Cattle_Y_C01065;Parent=Cattle_Y_T00883;Dbxref=GeneID:132344662,GenBank:XP_059740289.1;Name=XP_059740289.1;Note=The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon;exception=unclassified translation discrepancy;gbkey=CDS;gene=LOC132344662;partial=true;product=LOW QUALITY PROTEIN: heat shock transcription factor, Y-linked-like;protein_id=XP_059740289.1;gene_id=Cattle_Y_G00599;transcript_id=Cattle_Y_T00883;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	34755062	34755574	.	-	0	ID=Cattle_Y_C01066;Parent=Cattle_Y_T00883;Dbxref=GeneID:132344662,GenBank:XP_059740289.1;Name=XP_059740289.1;Note=The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon;exception=unclassified translation discrepancy;gbkey=CDS;gene=LOC132344662;partial=true;product=LOW QUALITY PROTEIN: heat shock transcription factor, Y-linked-like;protein_id=XP_059740289.1;gene_id=Cattle_Y_G00599;transcript_id=Cattle_Y_T00883;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	34825212	34827379	.	+	.	ID=Cattle_Y_G00600;Dbxref=GeneID:132344661;Name=LOC132344661;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344661;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00600;source_id=gene-LOC132344661
haplotype2-0000357	CAT	exon	34825212	34825334	.	+	.	ID=Cattle_Y_T00884;Parent=Cattle_Y_G00600;Dbxref=GeneID:132344661;gbkey=exon;gene=LOC132344661;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00600;transcript_id=Cattle_Y_T00884;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344661-6
haplotype2-0000357	CAT	exon	34825401	34825823	.	+	.	ID=Cattle_Y_T00885;Parent=Cattle_Y_G00600;Dbxref=GeneID:132344661;gbkey=exon;gene=LOC132344661;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00600;transcript_id=Cattle_Y_T00885;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344661-5
haplotype2-0000357	CAT	exon	34826583	34826664	.	+	.	ID=Cattle_Y_T00886;Parent=Cattle_Y_G00600;Dbxref=GeneID:132344661;gbkey=exon;gene=LOC132344661;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00600;transcript_id=Cattle_Y_T00886;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344661-4
haplotype2-0000357	CAT	exon	34826841	34826945	.	+	.	ID=Cattle_Y_T00887;Parent=Cattle_Y_G00600;Dbxref=GeneID:132344661;gbkey=exon;gene=LOC132344661;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00600;transcript_id=Cattle_Y_T00887;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344661-3
haplotype2-0000357	CAT	exon	34827041	34827185	.	+	.	ID=Cattle_Y_T00888;Parent=Cattle_Y_G00600;Dbxref=GeneID:132344661;gbkey=exon;gene=LOC132344661;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00600;transcript_id=Cattle_Y_T00888;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344661-2
haplotype2-0000357	CAT	exon	34827302	34827379	.	+	.	ID=Cattle_Y_T00889;Parent=Cattle_Y_G00600;Dbxref=GeneID:132344661;gbkey=exon;gene=LOC132344661;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00600;transcript_id=Cattle_Y_T00889;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344661
haplotype2-0000357	CAT	gene	34867449	34868187	.	-	.	ID=Cattle_Y_G00601;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00601;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	34867449	34868187	.	-	.	ID=Cattle_Y_T00890;Parent=Cattle_Y_G00601;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00601;transcript_id=Cattle_Y_T00890;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	35044512	35119719	.	-	.	ID=Cattle_Y_G00602;Dbxref=GeneID:132344457;Name=LOC132344457;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344457;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00602;source_id=gene-LOC132344457
haplotype2-0000357	CAT	exon	35044512	35044589	.	-	.	ID=Cattle_Y_T00891;Parent=Cattle_Y_G00602;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00602;transcript_id=Cattle_Y_T00891;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457-7
haplotype2-0000357	CAT	exon	35044706	35044851	.	-	.	ID=Cattle_Y_T00892;Parent=Cattle_Y_G00602;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00602;transcript_id=Cattle_Y_T00892;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457-6
haplotype2-0000357	CAT	exon	35044947	35045058	.	-	.	ID=Cattle_Y_T00893;Parent=Cattle_Y_G00602;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00602;transcript_id=Cattle_Y_T00893;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457-5
haplotype2-0000357	CAT	exon	35045242	35045319	.	-	.	ID=Cattle_Y_T00894;Parent=Cattle_Y_G00602;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00602;transcript_id=Cattle_Y_T00894;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457-4
haplotype2-0000357	CAT	exon	35046109	35046503	.	-	.	ID=Cattle_Y_T00895;Parent=Cattle_Y_G00602;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00602;transcript_id=Cattle_Y_T00895;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457-3
haplotype2-0000357	CAT	exon	35046586	35046668	.	-	.	ID=Cattle_Y_T00896;Parent=Cattle_Y_G00602;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00602;transcript_id=Cattle_Y_T00896;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457-2
haplotype2-0000357	CAT	exon	35119703	35119719	.	-	.	ID=Cattle_Y_T00897;Parent=Cattle_Y_G00602;Dbxref=GeneID:132344457;gbkey=exon;gene=LOC132344457;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00602;transcript_id=Cattle_Y_T00897;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344457
haplotype2-0000357	CAT	gene	35120631	35122425	.	-	.	ID=Cattle_Y_G00603;Dbxref=GeneID:132344656;Name=LOC132344656;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344656;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00603;source_id=gene-LOC132344656
haplotype2-0000357	CAT	mRNA	35120631	35122425	.	-	.	ID=Cattle_Y_T00898;Parent=Cattle_Y_G00603;Dbxref=GeneID:132344656,GenBank:XM_059884301.1;Name=XM_059884301.1;gbkey=mRNA;gene=LOC132344656;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=heat shock transcription factor%2C Y-linked-like%2C transcript variant X1;transcript_id=Cattle_Y_T00898;gene_id=Cattle_Y_G00603;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XM_059884301.1
haplotype2-0000357	CAT	exon	35120631	35121369	.	-	.	ID=Cattle_Y_E01393;Parent=Cattle_Y_T00898;Dbxref=GeneID:132344656,GenBank:XM_059884301.1;gbkey=mRNA;gene=LOC132344656;product=heat shock transcription factor, Y-linked-like, transcript variant X1;transcript_id=Cattle_Y_T00898;gene_id=Cattle_Y_G00603;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884301.1-2
haplotype2-0000357	CAT	exon	35121800	35122425	.	-	.	ID=Cattle_Y_E01394;Parent=Cattle_Y_T00898;Dbxref=GeneID:132344656,GenBank:XM_059884301.1;gbkey=mRNA;gene=LOC132344656;product=heat shock transcription factor, Y-linked-like, transcript variant X1;transcript_id=Cattle_Y_T00898;gene_id=Cattle_Y_G00603;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XM_059884301.1-1
haplotype2-0000357	CAT	CDS	35121800	35122189	.	-	0	ID=Cattle_Y_C01067;Parent=Cattle_Y_T00898;Dbxref=GeneID:132344656,GenBank:XP_059740284.1;Name=XP_059740284.1;gbkey=CDS;gene=LOC132344656;product=heat shock transcription factor, Y-linked-like;protein_id=XP_059740284.1_1;gene_id=Cattle_Y_G00603;transcript_id=Cattle_Y_T00898;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	transcript	35121283	35121892	.	-	.	ID=Cattle_Y_T00899;Parent=Cattle_Y_G00603;Dbxref=GeneID:132344656,GenBank:XR_009493661.1;Name=XR_009493661.1;gbkey=misc_RNA;gene=LOC132344656;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=heat shock transcription factor%2C Y-linked-like%2C transcript variant X2;transcript_id=Cattle_Y_T00899;gene_id=Cattle_Y_G00603;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-XR_009493661.1
haplotype2-0000357	CAT	exon	35121283	35121369	.	-	.	ID=Cattle_Y_E01395;Parent=Cattle_Y_T00899;Dbxref=GeneID:132344656,GenBank:XR_009493661.1;gbkey=misc_RNA;gene=LOC132344656;product=heat shock transcription factor, Y-linked-like, transcript variant X2;transcript_id=Cattle_Y_T00899;gene_id=Cattle_Y_G00603;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493661.1-2
haplotype2-0000357	CAT	exon	35121805	35121892	.	-	.	ID=Cattle_Y_E01396;Parent=Cattle_Y_T00899;Dbxref=GeneID:132344656,GenBank:XR_009493661.1;gbkey=misc_RNA;gene=LOC132344656;product=heat shock transcription factor, Y-linked-like, transcript variant X2;transcript_id=Cattle_Y_T00899;gene_id=Cattle_Y_G00603;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493661.1-1
haplotype2-0000357	CAT	gene	35197108	35197683	.	+	.	ID=Cattle_Y_G00604;Dbxref=GeneID:132344660;Name=LOC132344660;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344660;gene_biotype=protein_coding;partial=true;start_range=.,24728184;gene_id=Cattle_Y_G00604;source_id=gene-LOC132344660
haplotype2-0000357	CAT	mRNA	35197108	35197683	.	+	.	ID=Cattle_Y_T00900;Parent=Cattle_Y_G00604;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;Name=XM_059884305.1;gbkey=mRNA;gene=LOC132344660;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00900;gene_id=Cattle_Y_G00604;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884305.1
haplotype2-0000357	CAT	exon	35197108	35197233	.	+	.	ID=Cattle_Y_E01397;Parent=Cattle_Y_T00900;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00900;gene_id=Cattle_Y_G00604;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884305.1-1
haplotype2-0000357	CAT	exon	35197297	35197683	.	+	.	ID=Cattle_Y_E01398;Parent=Cattle_Y_T00900;Dbxref=GeneID:132344660,GenBank:XM_059884305.1;gbkey=mRNA;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,24728184;transcript_id=Cattle_Y_T00900;gene_id=Cattle_Y_G00604;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884305.1-2
haplotype2-0000357	CAT	CDS	35197108	35197233	.	+	0	ID=Cattle_Y_C01068;Parent=Cattle_Y_T00900;Dbxref=GeneID:132344660,GenBank:XP_059740288.1;Name=XP_059740288.1;gbkey=CDS;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740288.1;gene_id=Cattle_Y_G00604;transcript_id=Cattle_Y_T00900;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	35197297	35197683	.	+	0	ID=Cattle_Y_C01069;Parent=Cattle_Y_T00900;Dbxref=GeneID:132344660,GenBank:XP_059740288.1;Name=XP_059740288.1;gbkey=CDS;gene=LOC132344660;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740288.1;start_range=.,24728184;gene_id=Cattle_Y_G00604;transcript_id=Cattle_Y_T00900;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	35262270	35264211	.	+	.	ID=Cattle_Y_G00605;Dbxref=GeneID:132344659;Name=LOC132344659;description=testis-specific Y-encoded protein 1-like;end_range=24663580,.;gbkey=Gene;gene=LOC132344659;gene_biotype=protein_coding;partial=true;gene_id=Cattle_Y_G00605;source_id=gene-LOC132344659
haplotype2-0000357	CAT	mRNA	35262270	35264211	.	+	.	ID=Cattle_Y_T00901;Parent=Cattle_Y_G00605;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;Name=XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00901;gene_id=Cattle_Y_G00605;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884304.1
haplotype2-0000357	CAT	exon	35262270	35262608	.	+	.	ID=Cattle_Y_E01399;Parent=Cattle_Y_T00901;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;end_range=24663580,.;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00901;gene_id=Cattle_Y_G00605;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-1
haplotype2-0000357	CAT	exon	35263404	35263479	.	+	.	ID=Cattle_Y_E01400;Parent=Cattle_Y_T00901;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00901;gene_id=Cattle_Y_G00605;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-2
haplotype2-0000357	CAT	exon	35263663	35263776	.	+	.	ID=Cattle_Y_E01401;Parent=Cattle_Y_T00901;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00901;gene_id=Cattle_Y_G00605;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-3
haplotype2-0000357	CAT	exon	35263872	35264017	.	+	.	ID=Cattle_Y_E01402;Parent=Cattle_Y_T00901;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00901;gene_id=Cattle_Y_G00605;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-4
haplotype2-0000357	CAT	exon	35264134	35264211	.	+	.	ID=Cattle_Y_E01403;Parent=Cattle_Y_T00901;Dbxref=GeneID:132344659,GenBank:XM_059884304.1;gbkey=mRNA;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00901;gene_id=Cattle_Y_G00605;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884304.1-5
haplotype2-0000357	CAT	CDS	35262270	35262608	.	+	0	ID=Cattle_Y_C01070;Parent=Cattle_Y_T00901;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;end_range=24663580,.;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1;gene_id=Cattle_Y_G00605;transcript_id=Cattle_Y_T00901;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	35263404	35263479	.	+	0	ID=Cattle_Y_C01071;Parent=Cattle_Y_T00901;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1;gene_id=Cattle_Y_G00605;transcript_id=Cattle_Y_T00901;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	35263663	35263776	.	+	2	ID=Cattle_Y_C01072;Parent=Cattle_Y_T00901;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1;gene_id=Cattle_Y_G00605;transcript_id=Cattle_Y_T00901;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	35263872	35264017	.	+	2	ID=Cattle_Y_C01073;Parent=Cattle_Y_T00901;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1;gene_id=Cattle_Y_G00605;transcript_id=Cattle_Y_T00901;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	35264134	35264211	.	+	0	ID=Cattle_Y_C01074;Parent=Cattle_Y_T00901;Dbxref=GeneID:132344659,GenBank:XP_059740287.1;Name=XP_059740287.1;gbkey=CDS;gene=LOC132344659;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740287.1;gene_id=Cattle_Y_G00605;transcript_id=Cattle_Y_T00901;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	35274654	35305644	.	-	.	ID=Cattle_Y_G00606;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=likely_pseudogene;gene_id=Cattle_Y_G00606;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	35274654	35305644	.	-	.	ID=Cattle_Y_T00902;Parent=Cattle_Y_G00606;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00902;gene_id=Cattle_Y_G00606;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	35274654	35276478	.	-	.	ID=Cattle_Y_E01404;Parent=Cattle_Y_T00902;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00902;gene_id=Cattle_Y_G00606;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	exon	35305505	35305644	.	-	.	ID=Cattle_Y_E01405;Parent=Cattle_Y_T00902;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00902;gene_id=Cattle_Y_G00606;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	CDS	35274654	35276248	.	-	0	ID=Cattle_Y_C01075;Parent=Cattle_Y_T00902;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1_1;gene_id=Cattle_Y_G00606;transcript_id=Cattle_Y_T00902;gene_biotype=likely_pseudogene;transcript_biotype=likely_pseudogene
haplotype2-0000357	CAT	gene	35367449	35401044	.	+	.	ID=Cattle_Y_G00607;Dbxref=GeneID:104974629;Name=LOC104974629;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC104974629;gene_biotype=protein_coding;gene_id=Cattle_Y_G00607;source_id=gene-LOC104974629
haplotype2-0000357	CAT	mRNA	35367449	35401044	.	+	.	ID=Cattle_Y_T00903;Parent=Cattle_Y_G00607;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Name=NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00903;gene_id=Cattle_Y_G00607;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001319890.1
haplotype2-0000357	CAT	exon	35367449	35367588	.	+	.	ID=Cattle_Y_E01406;Parent=Cattle_Y_T00903;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00903;gene_id=Cattle_Y_G00607;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001319890.1-1
haplotype2-0000357	CAT	exon	35399245	35401044	.	+	.	ID=Cattle_Y_E01407;Parent=Cattle_Y_T00903;Dbxref=GeneID:104974629,GenBank:NM_001319890.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC104974629;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001319890.1;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T00903;gene_id=Cattle_Y_G00607;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001319890.1-2
haplotype2-0000357	CAT	CDS	35399316	35400590	.	+	0	ID=Cattle_Y_C01076;Parent=Cattle_Y_T00903;Dbxref=GeneID:104974629,GenBank:NP_001306819.1;Name=NP_001306819.1;gbkey=CDS;gene=LOC104974629;product=zinc finger protein 280B-like;protein_id=NP_001306819.1;gene_id=Cattle_Y_G00607;transcript_id=Cattle_Y_T00903;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	35420385	35430872	.	+	.	ID=Cattle_Y_G00608;Dbxref=GeneID:132344542;Name=LOC132344542;description=uncharacterized LOC132344542;gbkey=Gene;gene=LOC132344542;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00608;source_id=gene-LOC132344542
haplotype2-0000357	CAT	exon	35420385	35420776	.	+	.	ID=Cattle_Y_T00904;Parent=Cattle_Y_G00608;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00608;transcript_id=Cattle_Y_T00904;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542
haplotype2-0000357	CAT	exon	35428094	35428232	.	+	.	ID=Cattle_Y_T00905;Parent=Cattle_Y_G00608;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00608;transcript_id=Cattle_Y_T00905;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542-2
haplotype2-0000357	CAT	exon	35428941	35429056	.	+	.	ID=Cattle_Y_T00906;Parent=Cattle_Y_G00608;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00608;transcript_id=Cattle_Y_T00906;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542-3
haplotype2-0000357	CAT	exon	35430733	35430872	.	+	.	ID=Cattle_Y_T00907;Parent=Cattle_Y_G00608;Dbxref=GeneID:132344542;gbkey=exon;gene=LOC132344542;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00608;transcript_id=Cattle_Y_T00907;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344542-4
haplotype2-0000357	CAT	gene	35456291	35456818	.	+	.	ID=Cattle_Y_G00609;Dbxref=GeneID:132344658;Name=LOC132344658;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344658;gene_biotype=protein_coding;gene_id=Cattle_Y_G00609;source_id=gene-LOC132344658
haplotype2-0000357	CAT	mRNA	35456291	35456818	.	+	.	ID=Cattle_Y_T00908;Parent=Cattle_Y_G00609;Dbxref=GeneID:132344658,GenBank:XM_059884303.1;Name=XM_059884303.1;gbkey=mRNA;gene=LOC132344658;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00908;gene_id=Cattle_Y_G00609;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884303.1
haplotype2-0000357	CAT	exon	35456291	35456414	.	+	.	ID=Cattle_Y_E01408;Parent=Cattle_Y_T00908;Dbxref=GeneID:132344658,GenBank:XM_059884303.1;gbkey=mRNA;gene=LOC132344658;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00908;gene_id=Cattle_Y_G00609;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884303.1-1
haplotype2-0000357	CAT	exon	35456487	35456818	.	+	.	ID=Cattle_Y_E01409;Parent=Cattle_Y_T00908;Dbxref=GeneID:132344658,GenBank:XM_059884303.1;gbkey=mRNA;gene=LOC132344658;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00908;gene_id=Cattle_Y_G00609;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884303.1-2
haplotype2-0000357	CAT	CDS	35456291	35456414	.	+	0	ID=Cattle_Y_C01077;Parent=Cattle_Y_T00908;Dbxref=GeneID:132344658,GenBank:XP_059740286.1;Name=XP_059740286.1;gbkey=CDS;gene=LOC132344658;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740286.1;gene_id=Cattle_Y_G00609;transcript_id=Cattle_Y_T00908;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	35456487	35456818	.	+	2	ID=Cattle_Y_C01078;Parent=Cattle_Y_T00908;Dbxref=GeneID:132344658,GenBank:XP_059740286.1;Name=XP_059740286.1;gbkey=CDS;gene=LOC132344658;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740286.1;gene_id=Cattle_Y_G00609;transcript_id=Cattle_Y_T00908;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	35482991	35483533	.	-	.	ID=Cattle_Y_G00610;Dbxref=GeneID:132344657;Name=LOC132344657;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344657;gene_biotype=protein_coding;gene_id=Cattle_Y_G00610;source_id=gene-LOC132344657
haplotype2-0000357	CAT	mRNA	35482991	35483533	.	-	.	ID=Cattle_Y_T00909;Parent=Cattle_Y_G00610;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;Name=XM_059884302.1;gbkey=mRNA;gene=LOC132344657;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00909;gene_id=Cattle_Y_G00610;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884302.1
haplotype2-0000357	CAT	exon	35482991	35483344	.	-	.	ID=Cattle_Y_E01410;Parent=Cattle_Y_T00909;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00909;gene_id=Cattle_Y_G00610;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884302.1-2
haplotype2-0000357	CAT	exon	35483408	35483533	.	-	.	ID=Cattle_Y_E01411;Parent=Cattle_Y_T00909;Dbxref=GeneID:132344657,GenBank:XM_059884302.1;gbkey=mRNA;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00909;gene_id=Cattle_Y_G00610;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884302.1-1
haplotype2-0000357	CAT	CDS	35482991	35483344	.	-	0	ID=Cattle_Y_C01079;Parent=Cattle_Y_T00909;Dbxref=GeneID:132344657,GenBank:XP_059740285.1;Name=XP_059740285.1;gbkey=CDS;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740285.1;gene_id=Cattle_Y_G00610;transcript_id=Cattle_Y_T00909;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	35483408	35483533	.	-	0	ID=Cattle_Y_C01080;Parent=Cattle_Y_T00909;Dbxref=GeneID:132344657,GenBank:XP_059740285.1;Name=XP_059740285.1;gbkey=CDS;gene=LOC132344657;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740285.1;gene_id=Cattle_Y_G00610;transcript_id=Cattle_Y_T00909;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	35558154	35559948	.	+	.	ID=Cattle_Y_G00611;Dbxref=GeneID:132344656;Name=LOC132344656;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344656;gene_biotype=protein_coding;gene_id=Cattle_Y_G00611;source_id=gene-LOC132344656
haplotype2-0000357	CAT	mRNA	35558154	35559948	.	+	.	ID=Cattle_Y_T00910;Parent=Cattle_Y_G00611;Dbxref=GeneID:132344656,GenBank:XM_059884301.1;Name=XM_059884301.1;gbkey=mRNA;gene=LOC132344656;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=heat shock transcription factor%2C Y-linked-like%2C transcript variant X1;transcript_id=Cattle_Y_T00910;gene_id=Cattle_Y_G00611;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884301.1
haplotype2-0000357	CAT	exon	35558154	35558779	.	+	.	ID=Cattle_Y_E01412;Parent=Cattle_Y_T00910;Dbxref=GeneID:132344656,GenBank:XM_059884301.1;gbkey=mRNA;gene=LOC132344656;product=heat shock transcription factor, Y-linked-like, transcript variant X1;transcript_id=Cattle_Y_T00910;gene_id=Cattle_Y_G00611;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884301.1-1
haplotype2-0000357	CAT	exon	35559210	35559948	.	+	.	ID=Cattle_Y_E01413;Parent=Cattle_Y_T00910;Dbxref=GeneID:132344656,GenBank:XM_059884301.1;gbkey=mRNA;gene=LOC132344656;product=heat shock transcription factor, Y-linked-like, transcript variant X1;transcript_id=Cattle_Y_T00910;gene_id=Cattle_Y_G00611;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884301.1-2
haplotype2-0000357	CAT	CDS	35558270	35558779	.	+	0	ID=Cattle_Y_C01081;Parent=Cattle_Y_T00910;gene_id=Cattle_Y_G00611;transcript_id=Cattle_Y_T00910;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	35559210	35559941	.	+	0	ID=Cattle_Y_C01082;Parent=Cattle_Y_T00910;gene_id=Cattle_Y_G00611;transcript_id=Cattle_Y_T00910;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	transcript	35558687	35559296	.	+	.	ID=Cattle_Y_T00911;Parent=Cattle_Y_G00611;Dbxref=GeneID:132344656,GenBank:XR_009493661.1;Name=XR_009493661.1;gbkey=misc_RNA;gene=LOC132344656;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=heat shock transcription factor%2C Y-linked-like%2C transcript variant X2;transcript_id=Cattle_Y_T00911;gene_id=Cattle_Y_G00611;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=rna-XR_009493661.1
haplotype2-0000357	CAT	exon	35558687	35558774	.	+	.	ID=Cattle_Y_E01414;Parent=Cattle_Y_T00911;Dbxref=GeneID:132344656,GenBank:XR_009493661.1;gbkey=misc_RNA;gene=LOC132344656;product=heat shock transcription factor, Y-linked-like, transcript variant X2;transcript_id=Cattle_Y_T00911;gene_id=Cattle_Y_G00611;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493661.1-1
haplotype2-0000357	CAT	exon	35559210	35559296	.	+	.	ID=Cattle_Y_E01415;Parent=Cattle_Y_T00911;Dbxref=GeneID:132344656,GenBank:XR_009493661.1;gbkey=misc_RNA;gene=LOC132344656;product=heat shock transcription factor, Y-linked-like, transcript variant X2;transcript_id=Cattle_Y_T00911;gene_id=Cattle_Y_G00611;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493661.1-2
haplotype2-0000357	CAT	gene	35637487	35639612	.	+	.	ID=Cattle_Y_G00612;Dbxref=GeneID:132344655;Name=LOC132344655;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344655;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00612;source_id=gene-LOC132344655
haplotype2-0000357	CAT	exon	35637487	35637559	.	+	.	ID=Cattle_Y_T00912;Parent=Cattle_Y_G00612;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00612;transcript_id=Cattle_Y_T00912;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-6
haplotype2-0000357	CAT	exon	35637642	35638038	.	+	.	ID=Cattle_Y_T00913;Parent=Cattle_Y_G00612;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00612;transcript_id=Cattle_Y_T00913;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-5
haplotype2-0000357	CAT	exon	35638807	35638884	.	+	.	ID=Cattle_Y_T00914;Parent=Cattle_Y_G00612;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00612;transcript_id=Cattle_Y_T00914;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-4
haplotype2-0000357	CAT	exon	35639068	35639179	.	+	.	ID=Cattle_Y_T00915;Parent=Cattle_Y_G00612;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00612;transcript_id=Cattle_Y_T00915;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-3
haplotype2-0000357	CAT	exon	35639273	35639418	.	+	.	ID=Cattle_Y_T00916;Parent=Cattle_Y_G00612;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00612;transcript_id=Cattle_Y_T00916;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655-2
haplotype2-0000357	CAT	exon	35639535	35639612	.	+	.	ID=Cattle_Y_T00917;Parent=Cattle_Y_G00612;Dbxref=GeneID:132344655;gbkey=exon;gene=LOC132344655;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00612;transcript_id=Cattle_Y_T00917;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344655
haplotype2-0000357	CAT	gene	35754160	35754735	.	+	.	ID=Cattle_Y_G00613;Dbxref=GeneID:132344654;Name=LOC132344654;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344654;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00613;source_id=gene-LOC132344654
haplotype2-0000357	CAT	exon	35754160	35754273	.	+	.	ID=Cattle_Y_T00918;Parent=Cattle_Y_G00613;Dbxref=GeneID:132344654;gbkey=exon;gene=LOC132344654;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00613;transcript_id=Cattle_Y_T00918;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344654-2
haplotype2-0000357	CAT	exon	35754350	35754735	.	+	.	ID=Cattle_Y_T00919;Parent=Cattle_Y_G00613;Dbxref=GeneID:132344654;gbkey=exon;gene=LOC132344654;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00613;transcript_id=Cattle_Y_T00919;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344654
haplotype2-0000357	CAT	gene	35801998	35803692	.	-	.	ID=Cattle_Y_G00614;Dbxref=GeneID:132344456;Name=LOC132344456;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344456;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00614;source_id=gene-LOC132344456
haplotype2-0000357	CAT	exon	35801998	35802023	.	-	.	ID=Cattle_Y_T00920;Parent=Cattle_Y_G00614;Dbxref=GeneID:132344456;gbkey=exon;gene=LOC132344456;model_evidence=Supporting evidence includes similarity to: 2 Proteins;pseudo=true;gene_id=Cattle_Y_G00614;transcript_id=Cattle_Y_T00920;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344456-2
haplotype2-0000357	CAT	exon	35802104	35803692	.	-	.	ID=Cattle_Y_T00921;Parent=Cattle_Y_G00614;Dbxref=GeneID:132344456;gbkey=exon;gene=LOC132344456;model_evidence=Supporting evidence includes similarity to: 2 Proteins;pseudo=true;gene_id=Cattle_Y_G00614;transcript_id=Cattle_Y_T00921;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344456
haplotype2-0000357	CAT	gene	35888543	35889280	.	+	.	ID=Cattle_Y_G00615;Dbxref=GeneID:132344653;Name=LOC132344653;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344653;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00615;source_id=gene-LOC132344653
haplotype2-0000357	CAT	exon	35888543	35889280	.	+	.	ID=Cattle_Y_T00922;Parent=Cattle_Y_G00615;Dbxref=GeneID:132344653;gbkey=exon;gene=LOC132344653;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00615;transcript_id=Cattle_Y_T00922;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344653
haplotype2-0000357	CAT	gene	35908757	35926744	.	+	.	ID=Cattle_Y_G00616;Dbxref=GeneID:132344455;Name=LOC132344455;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344455;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00616;source_id=gene-LOC132344455
haplotype2-0000357	CAT	exon	35908757	35908760	.	+	.	ID=Cattle_Y_T00923;Parent=Cattle_Y_G00616;Dbxref=GeneID:132344455;gbkey=exon;gene=LOC132344455;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 53%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00616;transcript_id=Cattle_Y_T00923;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344455-4
haplotype2-0000357	CAT	exon	35913134	35913762	.	+	.	ID=Cattle_Y_T00924;Parent=Cattle_Y_G00616;Dbxref=GeneID:132344455;gbkey=exon;gene=LOC132344455;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 53%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00616;transcript_id=Cattle_Y_T00924;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344455-3
haplotype2-0000357	CAT	exon	35913800	35914034	.	+	.	ID=Cattle_Y_T00925;Parent=Cattle_Y_G00616;Dbxref=GeneID:132344455;gbkey=exon;gene=LOC132344455;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 53%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00616;transcript_id=Cattle_Y_T00925;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344455-2
haplotype2-0000357	CAT	exon	35926659	35926744	.	+	.	ID=Cattle_Y_T00926;Parent=Cattle_Y_G00616;Dbxref=GeneID:132344455;gbkey=exon;gene=LOC132344455;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 53%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00616;transcript_id=Cattle_Y_T00926;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344455
haplotype2-0000357	CAT	gene	35936119	35938512	.	-	.	ID=Cattle_Y_G00617;Dbxref=GeneID:132344454;Name=LOC132344454;description=protein Shroom2-like;gbkey=Gene;gene=LOC132344454;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00617;source_id=gene-LOC132344454
haplotype2-0000357	CAT	exon	35936119	35936314	.	-	.	ID=Cattle_Y_T00927;Parent=Cattle_Y_G00617;Dbxref=GeneID:132344454;gbkey=exon;gene=LOC132344454;model_evidence=Supporting evidence includes similarity to: 2 Proteins;pseudo=true;gene_id=Cattle_Y_G00617;transcript_id=Cattle_Y_T00927;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344454-2
haplotype2-0000357	CAT	exon	35937968	35938512	.	-	.	ID=Cattle_Y_T00928;Parent=Cattle_Y_G00617;Dbxref=GeneID:132344454;gbkey=exon;gene=LOC132344454;model_evidence=Supporting evidence includes similarity to: 2 Proteins;pseudo=true;gene_id=Cattle_Y_G00617;transcript_id=Cattle_Y_T00928;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344454
haplotype2-0000357	CAT	gene	36291340	36303617	.	-	.	ID=Cattle_Y_G00618;Dbxref=GeneID:132344516;Name=LOC132344516;description=uncharacterized LOC132344516;gbkey=Gene;gene=LOC132344516;gene_biotype=lncRNA;gene_id=Cattle_Y_G00618;source_id=gene-LOC132344516
haplotype2-0000357	CAT	lnc_RNA	36293950	36303617	.	-	.	ID=Cattle_Y_T00929;Parent=Cattle_Y_G00618;Dbxref=GeneID:132344516,GenBank:XR_009493653.1;Name=XR_009493653.1;gbkey=ncRNA;gene=LOC132344516;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=uncharacterized lncRNA%2C transcript variant X1;transcript_id=Cattle_Y_T00929;gene_id=Cattle_Y_G00618;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=rna-XR_009493653.1
haplotype2-0000357	CAT	exon	36293950	36295887	.	-	.	ID=Cattle_Y_E01416;Parent=Cattle_Y_T00929;Dbxref=GeneID:132344516,GenBank:XR_009493653.1;gbkey=ncRNA;gene=LOC132344516;product=uncharacterized lncRNA, transcript variant X1;transcript_id=Cattle_Y_T00929;gene_id=Cattle_Y_G00618;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493653.1-3
haplotype2-0000357	CAT	exon	36302013	36302077	.	-	.	ID=Cattle_Y_E01417;Parent=Cattle_Y_T00929;Dbxref=GeneID:132344516,GenBank:XR_009493653.1;gbkey=ncRNA;gene=LOC132344516;product=uncharacterized lncRNA, transcript variant X1;transcript_id=Cattle_Y_T00929;gene_id=Cattle_Y_G00618;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493653.1-2
haplotype2-0000357	CAT	exon	36303514	36303617	.	-	.	ID=Cattle_Y_E01418;Parent=Cattle_Y_T00929;Dbxref=GeneID:132344516,GenBank:XR_009493653.1;gbkey=ncRNA;gene=LOC132344516;product=uncharacterized lncRNA, transcript variant X1;transcript_id=Cattle_Y_T00929;gene_id=Cattle_Y_G00618;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493653.1-1
haplotype2-0000357	CAT	lnc_RNA	36291340	36303617	.	-	.	ID=Cattle_Y_T00930;Parent=Cattle_Y_G00618;Dbxref=GeneID:132344516,GenBank:XR_009493654.1;Name=XR_009493654.1;gbkey=ncRNA;gene=LOC132344516;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 1 sample with support for all annotated introns;product=uncharacterized lncRNA%2C transcript variant X2;transcript_id=Cattle_Y_T00930;gene_id=Cattle_Y_G00618;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=rna-XR_009493654.1
haplotype2-0000357	CAT	exon	36291340	36291724	.	-	.	ID=Cattle_Y_E01419;Parent=Cattle_Y_T00930;Dbxref=GeneID:132344516,GenBank:XR_009493654.1;gbkey=ncRNA;gene=LOC132344516;product=uncharacterized lncRNA, transcript variant X2;transcript_id=Cattle_Y_T00930;gene_id=Cattle_Y_G00618;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493654.1-3
haplotype2-0000357	CAT	exon	36302013	36302077	.	-	.	ID=Cattle_Y_E01420;Parent=Cattle_Y_T00930;Dbxref=GeneID:132344516,GenBank:XR_009493654.1;gbkey=ncRNA;gene=LOC132344516;product=uncharacterized lncRNA, transcript variant X2;transcript_id=Cattle_Y_T00930;gene_id=Cattle_Y_G00618;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493654.1-2
haplotype2-0000357	CAT	exon	36303514	36303617	.	-	.	ID=Cattle_Y_E01421;Parent=Cattle_Y_T00930;Dbxref=GeneID:132344516,GenBank:XR_009493654.1;gbkey=ncRNA;gene=LOC132344516;product=uncharacterized lncRNA, transcript variant X2;transcript_id=Cattle_Y_T00930;gene_id=Cattle_Y_G00618;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493654.1-1
haplotype2-0000357	CAT	gene	36353680	36355405	.	+	.	ID=Cattle_Y_G00619;Dbxref=GeneID:132344652;Name=LOC132344652;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344652;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00619;source_id=gene-LOC132344652
haplotype2-0000357	CAT	exon	36353680	36354149	.	+	.	ID=Cattle_Y_T00931;Parent=Cattle_Y_G00619;Dbxref=GeneID:132344652;gbkey=exon;gene=LOC132344652;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 40%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00619;transcript_id=Cattle_Y_T00931;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344652-2
haplotype2-0000357	CAT	exon	36354571	36355405	.	+	.	ID=Cattle_Y_T00932;Parent=Cattle_Y_G00619;Dbxref=GeneID:132344652;gbkey=exon;gene=LOC132344652;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 40%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00619;transcript_id=Cattle_Y_T00932;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344652
haplotype2-0000357	CAT	gene	36593720	36696364	.	+	.	ID=Cattle_Y_G00620;Dbxref=GeneID:132344515;Name=LOC132344515;description=gamma-taxilin-like;gbkey=Gene;gene=LOC132344515;gene_biotype=protein_coding;gene_id=Cattle_Y_G00620;source_id=gene-LOC132344515
haplotype2-0000357	CAT	mRNA	36593720	36696364	.	+	.	ID=Cattle_Y_T00933;Parent=Cattle_Y_G00620;Dbxref=GeneID:132344515,GenBank:XM_059884149.1;Name=XM_059884149.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;model_evidence=Supporting evidence includes similarity to: 9 ESTs%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 5 samples with support for all annotated introns;product=gamma-taxilin-like%2C transcript variant X1;transcript_id=Cattle_Y_T00933;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884149.1
haplotype2-0000357	CAT	exon	36593720	36593886	.	+	.	ID=Cattle_Y_E01422;Parent=Cattle_Y_T00933;Dbxref=GeneID:132344515,GenBank:XM_059884149.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X1;transcript_id=Cattle_Y_T00933;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884149.1-1
haplotype2-0000357	CAT	exon	36606971	36607275	.	+	.	ID=Cattle_Y_E01423;Parent=Cattle_Y_T00933;Dbxref=GeneID:132344515,GenBank:XM_059884149.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X1;transcript_id=Cattle_Y_T00933;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884149.1-2
haplotype2-0000357	CAT	exon	36608689	36608780	.	+	.	ID=Cattle_Y_E01424;Parent=Cattle_Y_T00933;Dbxref=GeneID:132344515,GenBank:XM_059884149.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X1;transcript_id=Cattle_Y_T00933;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884149.1-3
haplotype2-0000357	CAT	exon	36679295	36679465	.	+	.	ID=Cattle_Y_E01425;Parent=Cattle_Y_T00933;Dbxref=GeneID:132344515,GenBank:XM_059884149.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X1;transcript_id=Cattle_Y_T00933;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884149.1-4
haplotype2-0000357	CAT	exon	36684447	36684641	.	+	.	ID=Cattle_Y_E01426;Parent=Cattle_Y_T00933;Dbxref=GeneID:132344515,GenBank:XM_059884149.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X1;transcript_id=Cattle_Y_T00933;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884149.1-5
haplotype2-0000357	CAT	exon	36687289	36687408	.	+	.	ID=Cattle_Y_E01427;Parent=Cattle_Y_T00933;Dbxref=GeneID:132344515,GenBank:XM_059884149.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X1;transcript_id=Cattle_Y_T00933;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884149.1-6
haplotype2-0000357	CAT	exon	36688940	36689029	.	+	.	ID=Cattle_Y_E01428;Parent=Cattle_Y_T00933;Dbxref=GeneID:132344515,GenBank:XM_059884149.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X1;transcript_id=Cattle_Y_T00933;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884149.1-7
haplotype2-0000357	CAT	exon	36691126	36691218	.	+	.	ID=Cattle_Y_E01429;Parent=Cattle_Y_T00933;Dbxref=GeneID:132344515,GenBank:XM_059884149.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X1;transcript_id=Cattle_Y_T00933;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884149.1-8
haplotype2-0000357	CAT	exon	36693148	36693243	.	+	.	ID=Cattle_Y_E01430;Parent=Cattle_Y_T00933;Dbxref=GeneID:132344515,GenBank:XM_059884149.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X1;transcript_id=Cattle_Y_T00933;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884149.1-9
haplotype2-0000357	CAT	exon	36693913	36696364	.	+	.	ID=Cattle_Y_E01431;Parent=Cattle_Y_T00933;Dbxref=GeneID:132344515,GenBank:XM_059884149.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X1;transcript_id=Cattle_Y_T00933;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884149.1-10
haplotype2-0000357	CAT	CDS	36606987	36607275	.	+	0	ID=Cattle_Y_C01083;Parent=Cattle_Y_T00933;Dbxref=GeneID:132344515,GenBank:XP_059740132.1;Name=XP_059740132.1;gbkey=CDS;gene=LOC132344515;product=gamma-taxilin-like isoform X1;protein_id=XP_059740132.1;gene_id=Cattle_Y_G00620;transcript_id=Cattle_Y_T00933;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36608689	36608780	.	+	2	ID=Cattle_Y_C01084;Parent=Cattle_Y_T00933;Dbxref=GeneID:132344515,GenBank:XP_059740132.1;Name=XP_059740132.1;gbkey=CDS;gene=LOC132344515;product=gamma-taxilin-like isoform X1;protein_id=XP_059740132.1;gene_id=Cattle_Y_G00620;transcript_id=Cattle_Y_T00933;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36679295	36679465	.	+	0	ID=Cattle_Y_C01085;Parent=Cattle_Y_T00933;Dbxref=GeneID:132344515,GenBank:XP_059740132.1;Name=XP_059740132.1;gbkey=CDS;gene=LOC132344515;product=gamma-taxilin-like isoform X1;protein_id=XP_059740132.1;gene_id=Cattle_Y_G00620;transcript_id=Cattle_Y_T00933;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36684447	36684641	.	+	0	ID=Cattle_Y_C01086;Parent=Cattle_Y_T00933;Dbxref=GeneID:132344515,GenBank:XP_059740132.1;Name=XP_059740132.1;gbkey=CDS;gene=LOC132344515;product=gamma-taxilin-like isoform X1;protein_id=XP_059740132.1;gene_id=Cattle_Y_G00620;transcript_id=Cattle_Y_T00933;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36687289	36687408	.	+	0	ID=Cattle_Y_C01087;Parent=Cattle_Y_T00933;Dbxref=GeneID:132344515,GenBank:XP_059740132.1;Name=XP_059740132.1;gbkey=CDS;gene=LOC132344515;product=gamma-taxilin-like isoform X1;protein_id=XP_059740132.1;gene_id=Cattle_Y_G00620;transcript_id=Cattle_Y_T00933;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36688940	36689029	.	+	0	ID=Cattle_Y_C01088;Parent=Cattle_Y_T00933;Dbxref=GeneID:132344515,GenBank:XP_059740132.1;Name=XP_059740132.1;gbkey=CDS;gene=LOC132344515;product=gamma-taxilin-like isoform X1;protein_id=XP_059740132.1;gene_id=Cattle_Y_G00620;transcript_id=Cattle_Y_T00933;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36691126	36691218	.	+	0	ID=Cattle_Y_C01089;Parent=Cattle_Y_T00933;Dbxref=GeneID:132344515,GenBank:XP_059740132.1;Name=XP_059740132.1;gbkey=CDS;gene=LOC132344515;product=gamma-taxilin-like isoform X1;protein_id=XP_059740132.1;gene_id=Cattle_Y_G00620;transcript_id=Cattle_Y_T00933;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36693148	36693243	.	+	0	ID=Cattle_Y_C01090;Parent=Cattle_Y_T00933;Dbxref=GeneID:132344515,GenBank:XP_059740132.1;Name=XP_059740132.1;gbkey=CDS;gene=LOC132344515;product=gamma-taxilin-like isoform X1;protein_id=XP_059740132.1;gene_id=Cattle_Y_G00620;transcript_id=Cattle_Y_T00933;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36693913	36694050	.	+	0	ID=Cattle_Y_C01091;Parent=Cattle_Y_T00933;Dbxref=GeneID:132344515,GenBank:XP_059740132.1;Name=XP_059740132.1;gbkey=CDS;gene=LOC132344515;product=gamma-taxilin-like isoform X1;protein_id=XP_059740132.1;gene_id=Cattle_Y_G00620;transcript_id=Cattle_Y_T00933;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	36593722	36696364	.	+	.	ID=Cattle_Y_T00934;Parent=Cattle_Y_G00620;Dbxref=GeneID:132344515,GenBank:XM_059884150.1;Name=XM_059884150.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;model_evidence=Supporting evidence includes similarity to: 10 ESTs%2C 3 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=gamma-taxilin-like%2C transcript variant X2;transcript_id=Cattle_Y_T00934;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884150.1
haplotype2-0000357	CAT	exon	36593722	36593886	.	+	.	ID=Cattle_Y_E01432;Parent=Cattle_Y_T00934;Dbxref=GeneID:132344515,GenBank:XM_059884150.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X2;transcript_id=Cattle_Y_T00934;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884150.1-1
haplotype2-0000357	CAT	exon	36606971	36607275	.	+	.	ID=Cattle_Y_E01433;Parent=Cattle_Y_T00934;Dbxref=GeneID:132344515,GenBank:XM_059884150.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X2;transcript_id=Cattle_Y_T00934;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884150.1-2
haplotype2-0000357	CAT	exon	36608689	36608780	.	+	.	ID=Cattle_Y_E01434;Parent=Cattle_Y_T00934;Dbxref=GeneID:132344515,GenBank:XM_059884150.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X2;transcript_id=Cattle_Y_T00934;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884150.1-3
haplotype2-0000357	CAT	exon	36679295	36679465	.	+	.	ID=Cattle_Y_E01435;Parent=Cattle_Y_T00934;Dbxref=GeneID:132344515,GenBank:XM_059884150.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X2;transcript_id=Cattle_Y_T00934;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884150.1-4
haplotype2-0000357	CAT	exon	36684447	36684641	.	+	.	ID=Cattle_Y_E01436;Parent=Cattle_Y_T00934;Dbxref=GeneID:132344515,GenBank:XM_059884150.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X2;transcript_id=Cattle_Y_T00934;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884150.1-5
haplotype2-0000357	CAT	exon	36687289	36687408	.	+	.	ID=Cattle_Y_E01437;Parent=Cattle_Y_T00934;Dbxref=GeneID:132344515,GenBank:XM_059884150.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X2;transcript_id=Cattle_Y_T00934;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884150.1-6
haplotype2-0000357	CAT	exon	36688940	36689014	.	+	.	ID=Cattle_Y_E01438;Parent=Cattle_Y_T00934;Dbxref=GeneID:132344515,GenBank:XM_059884150.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X2;transcript_id=Cattle_Y_T00934;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884150.1-7
haplotype2-0000357	CAT	exon	36691126	36691218	.	+	.	ID=Cattle_Y_E01439;Parent=Cattle_Y_T00934;Dbxref=GeneID:132344515,GenBank:XM_059884150.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X2;transcript_id=Cattle_Y_T00934;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884150.1-8
haplotype2-0000357	CAT	exon	36693148	36693243	.	+	.	ID=Cattle_Y_E01440;Parent=Cattle_Y_T00934;Dbxref=GeneID:132344515,GenBank:XM_059884150.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X2;transcript_id=Cattle_Y_T00934;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884150.1-9
haplotype2-0000357	CAT	exon	36693913	36696364	.	+	.	ID=Cattle_Y_E01441;Parent=Cattle_Y_T00934;Dbxref=GeneID:132344515,GenBank:XM_059884150.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X2;transcript_id=Cattle_Y_T00934;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884150.1-10
haplotype2-0000357	CAT	CDS	36606987	36607275	.	+	0	ID=Cattle_Y_C01092;Parent=Cattle_Y_T00934;Dbxref=GeneID:132344515,GenBank:XP_059740133.1;Name=XP_059740133.1;gbkey=CDS;gene=LOC132344515;product=gamma-taxilin-like isoform X2;protein_id=XP_059740133.1;gene_id=Cattle_Y_G00620;transcript_id=Cattle_Y_T00934;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36608689	36608780	.	+	2	ID=Cattle_Y_C01093;Parent=Cattle_Y_T00934;Dbxref=GeneID:132344515,GenBank:XP_059740133.1;Name=XP_059740133.1;gbkey=CDS;gene=LOC132344515;product=gamma-taxilin-like isoform X2;protein_id=XP_059740133.1;gene_id=Cattle_Y_G00620;transcript_id=Cattle_Y_T00934;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36679295	36679465	.	+	0	ID=Cattle_Y_C01094;Parent=Cattle_Y_T00934;Dbxref=GeneID:132344515,GenBank:XP_059740133.1;Name=XP_059740133.1;gbkey=CDS;gene=LOC132344515;product=gamma-taxilin-like isoform X2;protein_id=XP_059740133.1;gene_id=Cattle_Y_G00620;transcript_id=Cattle_Y_T00934;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36684447	36684641	.	+	0	ID=Cattle_Y_C01095;Parent=Cattle_Y_T00934;Dbxref=GeneID:132344515,GenBank:XP_059740133.1;Name=XP_059740133.1;gbkey=CDS;gene=LOC132344515;product=gamma-taxilin-like isoform X2;protein_id=XP_059740133.1;gene_id=Cattle_Y_G00620;transcript_id=Cattle_Y_T00934;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36687289	36687408	.	+	0	ID=Cattle_Y_C01096;Parent=Cattle_Y_T00934;Dbxref=GeneID:132344515,GenBank:XP_059740133.1;Name=XP_059740133.1;gbkey=CDS;gene=LOC132344515;product=gamma-taxilin-like isoform X2;protein_id=XP_059740133.1;gene_id=Cattle_Y_G00620;transcript_id=Cattle_Y_T00934;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36688940	36689014	.	+	0	ID=Cattle_Y_C01097;Parent=Cattle_Y_T00934;Dbxref=GeneID:132344515,GenBank:XP_059740133.1;Name=XP_059740133.1;gbkey=CDS;gene=LOC132344515;product=gamma-taxilin-like isoform X2;protein_id=XP_059740133.1;gene_id=Cattle_Y_G00620;transcript_id=Cattle_Y_T00934;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36691126	36691218	.	+	0	ID=Cattle_Y_C01098;Parent=Cattle_Y_T00934;Dbxref=GeneID:132344515,GenBank:XP_059740133.1;Name=XP_059740133.1;gbkey=CDS;gene=LOC132344515;product=gamma-taxilin-like isoform X2;protein_id=XP_059740133.1;gene_id=Cattle_Y_G00620;transcript_id=Cattle_Y_T00934;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36693148	36693243	.	+	0	ID=Cattle_Y_C01099;Parent=Cattle_Y_T00934;Dbxref=GeneID:132344515,GenBank:XP_059740133.1;Name=XP_059740133.1;gbkey=CDS;gene=LOC132344515;product=gamma-taxilin-like isoform X2;protein_id=XP_059740133.1;gene_id=Cattle_Y_G00620;transcript_id=Cattle_Y_T00934;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36693913	36694050	.	+	0	ID=Cattle_Y_C01100;Parent=Cattle_Y_T00934;Dbxref=GeneID:132344515,GenBank:XP_059740133.1;Name=XP_059740133.1;gbkey=CDS;gene=LOC132344515;product=gamma-taxilin-like isoform X2;protein_id=XP_059740133.1;gene_id=Cattle_Y_G00620;transcript_id=Cattle_Y_T00934;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	36593720	36696364	.	+	.	ID=Cattle_Y_T00935;Parent=Cattle_Y_G00620;Dbxref=GeneID:132344515,GenBank:XM_059884151.1;Name=XM_059884151.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;model_evidence=Supporting evidence includes similarity to: 9 ESTs%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 5 samples with support for all annotated introns;product=gamma-taxilin-like%2C transcript variant X3;transcript_id=Cattle_Y_T00935;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884151.1
haplotype2-0000357	CAT	exon	36593720	36593886	.	+	.	ID=Cattle_Y_E01442;Parent=Cattle_Y_T00935;Dbxref=GeneID:132344515,GenBank:XM_059884151.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X3;transcript_id=Cattle_Y_T00935;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884151.1-1
haplotype2-0000357	CAT	exon	36606971	36607275	.	+	.	ID=Cattle_Y_E01443;Parent=Cattle_Y_T00935;Dbxref=GeneID:132344515,GenBank:XM_059884151.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X3;transcript_id=Cattle_Y_T00935;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884151.1-2
haplotype2-0000357	CAT	exon	36608689	36608780	.	+	.	ID=Cattle_Y_E01444;Parent=Cattle_Y_T00935;Dbxref=GeneID:132344515,GenBank:XM_059884151.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X3;transcript_id=Cattle_Y_T00935;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884151.1-3
haplotype2-0000357	CAT	exon	36679295	36679465	.	+	.	ID=Cattle_Y_E01445;Parent=Cattle_Y_T00935;Dbxref=GeneID:132344515,GenBank:XM_059884151.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X3;transcript_id=Cattle_Y_T00935;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884151.1-4
haplotype2-0000357	CAT	exon	36684447	36684641	.	+	.	ID=Cattle_Y_E01446;Parent=Cattle_Y_T00935;Dbxref=GeneID:132344515,GenBank:XM_059884151.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X3;transcript_id=Cattle_Y_T00935;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884151.1-5
haplotype2-0000357	CAT	exon	36687289	36687408	.	+	.	ID=Cattle_Y_E01447;Parent=Cattle_Y_T00935;Dbxref=GeneID:132344515,GenBank:XM_059884151.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X3;transcript_id=Cattle_Y_T00935;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884151.1-6
haplotype2-0000357	CAT	exon	36691126	36691218	.	+	.	ID=Cattle_Y_E01448;Parent=Cattle_Y_T00935;Dbxref=GeneID:132344515,GenBank:XM_059884151.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X3;transcript_id=Cattle_Y_T00935;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884151.1-7
haplotype2-0000357	CAT	exon	36693148	36693243	.	+	.	ID=Cattle_Y_E01449;Parent=Cattle_Y_T00935;Dbxref=GeneID:132344515,GenBank:XM_059884151.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X3;transcript_id=Cattle_Y_T00935;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884151.1-8
haplotype2-0000357	CAT	exon	36693913	36696364	.	+	.	ID=Cattle_Y_E01450;Parent=Cattle_Y_T00935;Dbxref=GeneID:132344515,GenBank:XM_059884151.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344515;product=gamma-taxilin-like, transcript variant X3;transcript_id=Cattle_Y_T00935;gene_id=Cattle_Y_G00620;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884151.1-9
haplotype2-0000357	CAT	CDS	36606987	36607275	.	+	0	ID=Cattle_Y_C01101;Parent=Cattle_Y_T00935;Dbxref=GeneID:132344515,GenBank:XP_059740134.1;Name=XP_059740134.1;gbkey=CDS;gene=LOC132344515;product=gamma-taxilin-like isoform X3;protein_id=XP_059740134.1;gene_id=Cattle_Y_G00620;transcript_id=Cattle_Y_T00935;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36608689	36608780	.	+	2	ID=Cattle_Y_C01102;Parent=Cattle_Y_T00935;Dbxref=GeneID:132344515,GenBank:XP_059740134.1;Name=XP_059740134.1;gbkey=CDS;gene=LOC132344515;product=gamma-taxilin-like isoform X3;protein_id=XP_059740134.1;gene_id=Cattle_Y_G00620;transcript_id=Cattle_Y_T00935;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36679295	36679465	.	+	0	ID=Cattle_Y_C01103;Parent=Cattle_Y_T00935;Dbxref=GeneID:132344515,GenBank:XP_059740134.1;Name=XP_059740134.1;gbkey=CDS;gene=LOC132344515;product=gamma-taxilin-like isoform X3;protein_id=XP_059740134.1;gene_id=Cattle_Y_G00620;transcript_id=Cattle_Y_T00935;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36684447	36684641	.	+	0	ID=Cattle_Y_C01104;Parent=Cattle_Y_T00935;Dbxref=GeneID:132344515,GenBank:XP_059740134.1;Name=XP_059740134.1;gbkey=CDS;gene=LOC132344515;product=gamma-taxilin-like isoform X3;protein_id=XP_059740134.1;gene_id=Cattle_Y_G00620;transcript_id=Cattle_Y_T00935;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36687289	36687408	.	+	0	ID=Cattle_Y_C01105;Parent=Cattle_Y_T00935;Dbxref=GeneID:132344515,GenBank:XP_059740134.1;Name=XP_059740134.1;gbkey=CDS;gene=LOC132344515;product=gamma-taxilin-like isoform X3;protein_id=XP_059740134.1;gene_id=Cattle_Y_G00620;transcript_id=Cattle_Y_T00935;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36691126	36691218	.	+	0	ID=Cattle_Y_C01106;Parent=Cattle_Y_T00935;Dbxref=GeneID:132344515,GenBank:XP_059740134.1;Name=XP_059740134.1;gbkey=CDS;gene=LOC132344515;product=gamma-taxilin-like isoform X3;protein_id=XP_059740134.1;gene_id=Cattle_Y_G00620;transcript_id=Cattle_Y_T00935;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36693148	36693243	.	+	0	ID=Cattle_Y_C01107;Parent=Cattle_Y_T00935;Dbxref=GeneID:132344515,GenBank:XP_059740134.1;Name=XP_059740134.1;gbkey=CDS;gene=LOC132344515;product=gamma-taxilin-like isoform X3;protein_id=XP_059740134.1;gene_id=Cattle_Y_G00620;transcript_id=Cattle_Y_T00935;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36693913	36694050	.	+	0	ID=Cattle_Y_C01108;Parent=Cattle_Y_T00935;Dbxref=GeneID:132344515,GenBank:XP_059740134.1;Name=XP_059740134.1;gbkey=CDS;gene=LOC132344515;product=gamma-taxilin-like isoform X3;protein_id=XP_059740134.1;gene_id=Cattle_Y_G00620;transcript_id=Cattle_Y_T00935;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	36800982	36801640	.	+	.	ID=Cattle_Y_G00621;Dbxref=GeneID:132344651;Name=LOC132344651;description=uncharacterized LOC132344651;gbkey=Gene;gene=LOC132344651;gene_biotype=lncRNA;gene_id=Cattle_Y_G00621;source_id=gene-LOC132344651
haplotype2-0000357	CAT	lnc_RNA	36800982	36801640	.	+	.	ID=Cattle_Y_T00936;Parent=Cattle_Y_G00621;Dbxref=GeneID:132344651,GenBank:XR_009493660.1;Name=XR_009493660.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=ncRNA;gene=LOC132344651;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T00936;gene_id=Cattle_Y_G00621;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=rna-XR_009493660.1
haplotype2-0000357	CAT	exon	36800982	36801160	.	+	.	ID=Cattle_Y_E01451;Parent=Cattle_Y_T00936;Dbxref=GeneID:132344651,GenBank:XR_009493660.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=ncRNA;gene=LOC132344651;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T00936;gene_id=Cattle_Y_G00621;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493660.1-1
haplotype2-0000357	CAT	exon	36801344	36801640	.	+	.	ID=Cattle_Y_E01452;Parent=Cattle_Y_T00936;Dbxref=GeneID:132344651,GenBank:XR_009493660.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=ncRNA;gene=LOC132344651;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T00936;gene_id=Cattle_Y_G00621;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493660.1-2
haplotype2-0000357	CAT	gene	36831116	36832045	.	-	.	ID=Cattle_Y_G00622;Dbxref=GeneID:132342092;Name=LOC132342092;description=olfactory receptor 4C6-like;gbkey=Gene;gene=LOC132342092;gene_biotype=protein_coding;gene_id=Cattle_Y_G00622;source_id=gene-LOC132342092
haplotype2-0000357	CAT	mRNA	36831116	36832045	.	-	.	ID=Cattle_Y_T00937;Parent=Cattle_Y_G00622;Dbxref=GeneID:132342092,GenBank:XM_059884300.1;Name=XM_059884300.1;gbkey=mRNA;gene=LOC132342092;model_evidence=Supporting evidence includes similarity to: 8 Proteins;product=olfactory receptor 4C6-like;transcript_id=Cattle_Y_T00937;gene_id=Cattle_Y_G00622;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884300.1
haplotype2-0000357	CAT	exon	36831116	36832045	.	-	.	ID=Cattle_Y_E01453;Parent=Cattle_Y_T00937;Dbxref=GeneID:132342092,GenBank:XM_059884300.1;gbkey=mRNA;gene=LOC132342092;product=olfactory receptor 4C6-like;transcript_id=Cattle_Y_T00937;gene_id=Cattle_Y_G00622;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884300.1-1
haplotype2-0000357	CAT	CDS	36831116	36832045	.	-	0	ID=Cattle_Y_C01109;Parent=Cattle_Y_T00937;Dbxref=GeneID:132342092,GenBank:XP_059740283.1;Name=XP_059740283.1;gbkey=CDS;gene=LOC132342092;product=olfactory receptor 4C6-like;protein_id=XP_059740283.1;gene_id=Cattle_Y_G00622;transcript_id=Cattle_Y_T00937;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	36850910	36851828	.	-	.	ID=Cattle_Y_G00623;Dbxref=GeneID:132344650;Name=LOC132344650;description=olfactory receptor 4C3D-like;gbkey=Gene;gene=LOC132344650;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00623;source_id=gene-LOC132344650
haplotype2-0000357	CAT	exon	36850910	36851828	.	-	.	ID=Cattle_Y_T00938;Parent=Cattle_Y_G00623;Dbxref=GeneID:132344650;gbkey=exon;gene=LOC132344650;model_evidence=Supporting evidence includes similarity to: 9 Proteins;pseudo=true;gene_id=Cattle_Y_G00623;transcript_id=Cattle_Y_T00938;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344650
haplotype2-0000357	CAT	gene	36868998	36869935	.	-	.	ID=Cattle_Y_G00624;Dbxref=GeneID:132344453;Name=LOC132344453;description=olfactory receptor 4C3D-like;gbkey=Gene;gene=LOC132344453;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00624;source_id=gene-LOC132344453
haplotype2-0000357	CAT	exon	36868998	36869935	.	-	.	ID=Cattle_Y_T00939;Parent=Cattle_Y_G00624;Dbxref=GeneID:132344453;gbkey=exon;gene=LOC132344453;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 26%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00624;transcript_id=Cattle_Y_T00939;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344453
haplotype2-0000357	CAT	gene	36874055	36877677	.	-	.	ID=Cattle_Y_G00625;Dbxref=GeneID:132344649;Name=LOC132344649;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344649;gene_biotype=protein_coding;gene_id=Cattle_Y_G00625;source_id=gene-LOC132344649
haplotype2-0000357	CAT	mRNA	36874055	36877677	.	-	.	ID=Cattle_Y_T00940;Parent=Cattle_Y_G00625;Dbxref=GeneID:132344649,GenBank:XM_059884298.1;Name=XM_059884298.1;gbkey=mRNA;gene=LOC132344649;model_evidence=Supporting evidence includes similarity to: 2 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T00940;gene_id=Cattle_Y_G00625;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884298.1
haplotype2-0000357	CAT	exon	36874055	36874268	.	-	.	ID=Cattle_Y_E01454;Parent=Cattle_Y_T00940;Dbxref=GeneID:132344649,GenBank:XM_059884298.1;gbkey=mRNA;gene=LOC132344649;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00940;gene_id=Cattle_Y_G00625;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884298.1-6
haplotype2-0000357	CAT	exon	36875524	36875610	.	-	.	ID=Cattle_Y_E01455;Parent=Cattle_Y_T00940;Dbxref=GeneID:132344649,GenBank:XM_059884298.1;gbkey=mRNA;gene=LOC132344649;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00940;gene_id=Cattle_Y_G00625;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884298.1-5
haplotype2-0000357	CAT	exon	36875730	36875875	.	-	.	ID=Cattle_Y_E01456;Parent=Cattle_Y_T00940;Dbxref=GeneID:132344649,GenBank:XM_059884298.1;gbkey=mRNA;gene=LOC132344649;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00940;gene_id=Cattle_Y_G00625;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884298.1-4
haplotype2-0000357	CAT	exon	36876017	36876128	.	-	.	ID=Cattle_Y_E01457;Parent=Cattle_Y_T00940;Dbxref=GeneID:132344649,GenBank:XM_059884298.1;gbkey=mRNA;gene=LOC132344649;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00940;gene_id=Cattle_Y_G00625;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884298.1-3
haplotype2-0000357	CAT	exon	36876271	36876348	.	-	.	ID=Cattle_Y_E01458;Parent=Cattle_Y_T00940;Dbxref=GeneID:132344649,GenBank:XM_059884298.1;gbkey=mRNA;gene=LOC132344649;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00940;gene_id=Cattle_Y_G00625;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884298.1-2
haplotype2-0000357	CAT	exon	36876941	36877677	.	-	.	ID=Cattle_Y_E01459;Parent=Cattle_Y_T00940;Dbxref=GeneID:132344649,GenBank:XM_059884298.1;gbkey=mRNA;gene=LOC132344649;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00940;gene_id=Cattle_Y_G00625;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884298.1-1
haplotype2-0000357	CAT	CDS	36874245	36874268	.	-	0	ID=Cattle_Y_C01110;Parent=Cattle_Y_T00940;Dbxref=GeneID:132344649,GenBank:XP_059740281.1;Name=XP_059740281.1;gbkey=CDS;gene=LOC132344649;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740281.1;gene_id=Cattle_Y_G00625;transcript_id=Cattle_Y_T00940;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36875524	36875610	.	-	0	ID=Cattle_Y_C01111;Parent=Cattle_Y_T00940;Dbxref=GeneID:132344649,GenBank:XP_059740281.1;Name=XP_059740281.1;gbkey=CDS;gene=LOC132344649;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740281.1;gene_id=Cattle_Y_G00625;transcript_id=Cattle_Y_T00940;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36875730	36875875	.	-	2	ID=Cattle_Y_C01112;Parent=Cattle_Y_T00940;Dbxref=GeneID:132344649,GenBank:XP_059740281.1;Name=XP_059740281.1;gbkey=CDS;gene=LOC132344649;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740281.1;gene_id=Cattle_Y_G00625;transcript_id=Cattle_Y_T00940;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36876017	36876128	.	-	0	ID=Cattle_Y_C01113;Parent=Cattle_Y_T00940;Dbxref=GeneID:132344649,GenBank:XP_059740281.1;Name=XP_059740281.1;gbkey=CDS;gene=LOC132344649;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740281.1;gene_id=Cattle_Y_G00625;transcript_id=Cattle_Y_T00940;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36876271	36876348	.	-	0	ID=Cattle_Y_C01114;Parent=Cattle_Y_T00940;Dbxref=GeneID:132344649,GenBank:XP_059740281.1;Name=XP_059740281.1;gbkey=CDS;gene=LOC132344649;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740281.1;gene_id=Cattle_Y_G00625;transcript_id=Cattle_Y_T00940;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36876941	36877468	.	-	0	ID=Cattle_Y_C01115;Parent=Cattle_Y_T00940;Dbxref=GeneID:132344649,GenBank:XP_059740281.1;Name=XP_059740281.1;gbkey=CDS;gene=LOC132344649;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740281.1;gene_id=Cattle_Y_G00625;transcript_id=Cattle_Y_T00940;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	36874055	36877677	.	-	.	ID=Cattle_Y_T00941;Parent=Cattle_Y_G00625;Dbxref=GeneID:132344649,GenBank:XM_059884299.1;Name=XM_059884299.1;gbkey=mRNA;gene=LOC132344649;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T00941;gene_id=Cattle_Y_G00625;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884299.1
haplotype2-0000357	CAT	exon	36874055	36874268	.	-	.	ID=Cattle_Y_E01460;Parent=Cattle_Y_T00941;Dbxref=GeneID:132344649,GenBank:XM_059884299.1;gbkey=mRNA;gene=LOC132344649;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00941;gene_id=Cattle_Y_G00625;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884299.1-5
haplotype2-0000357	CAT	exon	36875524	36875610	.	-	.	ID=Cattle_Y_E01461;Parent=Cattle_Y_T00941;Dbxref=GeneID:132344649,GenBank:XM_059884299.1;gbkey=mRNA;gene=LOC132344649;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00941;gene_id=Cattle_Y_G00625;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884299.1-4
haplotype2-0000357	CAT	exon	36875730	36875875	.	-	.	ID=Cattle_Y_E01462;Parent=Cattle_Y_T00941;Dbxref=GeneID:132344649,GenBank:XM_059884299.1;gbkey=mRNA;gene=LOC132344649;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00941;gene_id=Cattle_Y_G00625;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884299.1-3
haplotype2-0000357	CAT	exon	36876017	36876128	.	-	.	ID=Cattle_Y_E01463;Parent=Cattle_Y_T00941;Dbxref=GeneID:132344649,GenBank:XM_059884299.1;gbkey=mRNA;gene=LOC132344649;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00941;gene_id=Cattle_Y_G00625;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884299.1-2
haplotype2-0000357	CAT	exon	36876920	36877677	.	-	.	ID=Cattle_Y_E01464;Parent=Cattle_Y_T00941;Dbxref=GeneID:132344649,GenBank:XM_059884299.1;gbkey=mRNA;gene=LOC132344649;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00941;gene_id=Cattle_Y_G00625;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884299.1-1
haplotype2-0000357	CAT	CDS	36874245	36874268	.	-	0	ID=Cattle_Y_C01116;Parent=Cattle_Y_T00941;Dbxref=GeneID:132344649,GenBank:XP_059740282.1;Name=XP_059740282.1;gbkey=CDS;gene=LOC132344649;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740282.1;gene_id=Cattle_Y_G00625;transcript_id=Cattle_Y_T00941;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36875524	36875610	.	-	0	ID=Cattle_Y_C01117;Parent=Cattle_Y_T00941;Dbxref=GeneID:132344649,GenBank:XP_059740282.1;Name=XP_059740282.1;gbkey=CDS;gene=LOC132344649;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740282.1;gene_id=Cattle_Y_G00625;transcript_id=Cattle_Y_T00941;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36875730	36875875	.	-	2	ID=Cattle_Y_C01118;Parent=Cattle_Y_T00941;Dbxref=GeneID:132344649,GenBank:XP_059740282.1;Name=XP_059740282.1;gbkey=CDS;gene=LOC132344649;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740282.1;gene_id=Cattle_Y_G00625;transcript_id=Cattle_Y_T00941;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36876017	36876128	.	-	0	ID=Cattle_Y_C01119;Parent=Cattle_Y_T00941;Dbxref=GeneID:132344649,GenBank:XP_059740282.1;Name=XP_059740282.1;gbkey=CDS;gene=LOC132344649;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740282.1;gene_id=Cattle_Y_G00625;transcript_id=Cattle_Y_T00941;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	36876920	36877468	.	-	0	ID=Cattle_Y_C01120;Parent=Cattle_Y_T00941;Dbxref=GeneID:132344649,GenBank:XP_059740282.1;Name=XP_059740282.1;gbkey=CDS;gene=LOC132344649;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740282.1;gene_id=Cattle_Y_G00625;transcript_id=Cattle_Y_T00941;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	36883058	37003805	.	-	.	ID=Cattle_Y_G00626;Dbxref=GeneID:132344452;Name=LOC132344452;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344452;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00626;source_id=gene-LOC132344452
haplotype2-0000357	CAT	exon	36883058	36883368	.	-	.	ID=Cattle_Y_T00942;Parent=Cattle_Y_G00626;Dbxref=GeneID:132344452;gbkey=exon;gene=LOC132344452;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00626;transcript_id=Cattle_Y_T00942;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344452-4
haplotype2-0000357	CAT	exon	36997628	36998354	.	-	.	ID=Cattle_Y_T00943;Parent=Cattle_Y_G00626;Dbxref=GeneID:132344452;gbkey=exon;gene=LOC132344452;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00626;transcript_id=Cattle_Y_T00943;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344452-3
haplotype2-0000357	CAT	exon	36998398	36998763	.	-	.	ID=Cattle_Y_T00944;Parent=Cattle_Y_G00626;Dbxref=GeneID:132344452;gbkey=exon;gene=LOC132344452;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00626;transcript_id=Cattle_Y_T00944;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344452-2
haplotype2-0000357	CAT	exon	37003750	37003805	.	-	.	ID=Cattle_Y_T00945;Parent=Cattle_Y_G00626;Dbxref=GeneID:132344452;gbkey=exon;gene=LOC132344452;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00626;transcript_id=Cattle_Y_T00945;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344452
haplotype2-0000357	CAT	gene	37010741	37015959	.	-	.	ID=Cattle_Y_G00627;Dbxref=GeneID:132344514;Name=LOC132344514;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC132344514;gene_biotype=protein_coding;gene_id=Cattle_Y_G00627;source_id=gene-LOC132344514
haplotype2-0000357	CAT	mRNA	37010741	37015959	.	-	.	ID=Cattle_Y_T00946;Parent=Cattle_Y_G00627;Dbxref=GeneID:132344514,GenBank:XM_059884148.1;Name=XM_059884148.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344514;model_evidence=Supporting evidence includes similarity to: 16 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T00946;gene_id=Cattle_Y_G00627;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884148.1
haplotype2-0000357	CAT	exon	37010741	37011566	.	-	.	ID=Cattle_Y_E01465;Parent=Cattle_Y_T00946;Dbxref=GeneID:132344514,GenBank:XM_059884148.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344514;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T00946;gene_id=Cattle_Y_G00627;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884148.1-4
haplotype2-0000357	CAT	exon	37012325	37012927	.	-	.	ID=Cattle_Y_E01466;Parent=Cattle_Y_T00946;Dbxref=GeneID:132344514,GenBank:XM_059884148.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344514;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T00946;gene_id=Cattle_Y_G00627;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884148.1-3
haplotype2-0000357	CAT	exon	37013212	37013531	.	-	.	ID=Cattle_Y_E01467;Parent=Cattle_Y_T00946;Dbxref=GeneID:132344514,GenBank:XM_059884148.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344514;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T00946;gene_id=Cattle_Y_G00627;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884148.1-2
haplotype2-0000357	CAT	exon	37015790	37015959	.	-	.	ID=Cattle_Y_E01468;Parent=Cattle_Y_T00946;Dbxref=GeneID:132344514,GenBank:XM_059884148.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344514;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T00946;gene_id=Cattle_Y_G00627;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884148.1-1
haplotype2-0000357	CAT	CDS	37010990	37011566	.	-	1	ID=Cattle_Y_C01121;Parent=Cattle_Y_T00946;Dbxref=GeneID:132344514,GenBank:XP_059740131.1;Name=XP_059740131.1;gbkey=CDS;gene=LOC132344514;product=melanoma antigen preferentially expressed in tumors-like;protein_id=XP_059740131.1;gene_id=Cattle_Y_G00627;transcript_id=Cattle_Y_T00946;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37012325	37012927	.	-	1	ID=Cattle_Y_C01122;Parent=Cattle_Y_T00946;Dbxref=GeneID:132344514,GenBank:XP_059740131.1;Name=XP_059740131.1;gbkey=CDS;gene=LOC132344514;product=melanoma antigen preferentially expressed in tumors-like;protein_id=XP_059740131.1;gene_id=Cattle_Y_G00627;transcript_id=Cattle_Y_T00946;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37013212	37013504	.	-	0	ID=Cattle_Y_C01123;Parent=Cattle_Y_T00946;Dbxref=GeneID:132344514,GenBank:XP_059740131.1;Name=XP_059740131.1;gbkey=CDS;gene=LOC132344514;product=melanoma antigen preferentially expressed in tumors-like;protein_id=XP_059740131.1;gene_id=Cattle_Y_G00627;transcript_id=Cattle_Y_T00946;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	37062483	37063673	.	+	.	ID=Cattle_Y_G00628;Dbxref=GeneID:132344642;Name=LOC132344642;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344642;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00628;source_id=gene-LOC132344642
haplotype2-0000357	CAT	exon	37062483	37063673	.	+	.	ID=Cattle_Y_T00947;Parent=Cattle_Y_G00628;Dbxref=GeneID:132344642;gbkey=exon;gene=LOC132344642;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 85%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00628;transcript_id=Cattle_Y_T00947;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344642
haplotype2-0000357	CAT	gene	37073014	37076585	.	-	.	ID=Cattle_Y_G00629;Dbxref=GeneID:132344643;Name=LOC132344643;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344643;gene_biotype=protein_coding;gene_id=Cattle_Y_G00629;source_id=gene-LOC132344643
haplotype2-0000357	CAT	mRNA	37073014	37076585	.	-	.	ID=Cattle_Y_T00948;Parent=Cattle_Y_G00629;Dbxref=GeneID:132344643,GenBank:XM_059884295.1;Name=XM_059884295.1;gbkey=mRNA;gene=LOC132344643;model_evidence=Supporting evidence includes similarity to: 6 Proteins%2C and 9%25 coverage of the annotated genomic feature by RNAseq alignments;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00948;gene_id=Cattle_Y_G00629;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884295.1
haplotype2-0000357	CAT	exon	37073014	37073152	.	-	.	ID=Cattle_Y_E01469;Parent=Cattle_Y_T00948;Dbxref=GeneID:132344643,GenBank:XM_059884295.1;gbkey=mRNA;gene=LOC132344643;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00948;gene_id=Cattle_Y_G00629;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884295.1-6
haplotype2-0000357	CAT	exon	37073269	37073414	.	-	.	ID=Cattle_Y_E01470;Parent=Cattle_Y_T00948;Dbxref=GeneID:132344643,GenBank:XM_059884295.1;gbkey=mRNA;gene=LOC132344643;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00948;gene_id=Cattle_Y_G00629;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884295.1-5
haplotype2-0000357	CAT	exon	37073509	37073614	.	-	.	ID=Cattle_Y_E01471;Parent=Cattle_Y_T00948;Dbxref=GeneID:132344643,GenBank:XM_059884295.1;gbkey=mRNA;gene=LOC132344643;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00948;gene_id=Cattle_Y_G00629;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884295.1-4
haplotype2-0000357	CAT	exon	37073803	37073880	.	-	.	ID=Cattle_Y_E01472;Parent=Cattle_Y_T00948;Dbxref=GeneID:132344643,GenBank:XM_059884295.1;gbkey=mRNA;gene=LOC132344643;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00948;gene_id=Cattle_Y_G00629;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884295.1-3
haplotype2-0000357	CAT	exon	37075959	37076395	.	-	.	ID=Cattle_Y_E01473;Parent=Cattle_Y_T00948;Dbxref=GeneID:132344643,GenBank:XM_059884295.1;gbkey=mRNA;gene=LOC132344643;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00948;gene_id=Cattle_Y_G00629;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884295.1-2
haplotype2-0000357	CAT	exon	37076447	37076585	.	-	.	ID=Cattle_Y_E01474;Parent=Cattle_Y_T00948;Dbxref=GeneID:132344643,GenBank:XM_059884295.1;gbkey=mRNA;gene=LOC132344643;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00948;gene_id=Cattle_Y_G00629;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884295.1-1
haplotype2-0000357	CAT	CDS	37073075	37073152	.	-	0	ID=Cattle_Y_C01124;Parent=Cattle_Y_T00948;Dbxref=GeneID:132344643,GenBank:XP_059740278.1;Name=XP_059740278.1;gbkey=CDS;gene=LOC132344643;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740278.1;gene_id=Cattle_Y_G00629;transcript_id=Cattle_Y_T00948;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37073269	37073414	.	-	2	ID=Cattle_Y_C01125;Parent=Cattle_Y_T00948;Dbxref=GeneID:132344643,GenBank:XP_059740278.1;Name=XP_059740278.1;gbkey=CDS;gene=LOC132344643;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740278.1;gene_id=Cattle_Y_G00629;transcript_id=Cattle_Y_T00948;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37073509	37073614	.	-	0	ID=Cattle_Y_C01126;Parent=Cattle_Y_T00948;Dbxref=GeneID:132344643,GenBank:XP_059740278.1;Name=XP_059740278.1;gbkey=CDS;gene=LOC132344643;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740278.1;gene_id=Cattle_Y_G00629;transcript_id=Cattle_Y_T00948;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37073803	37073880	.	-	0	ID=Cattle_Y_C01127;Parent=Cattle_Y_T00948;Dbxref=GeneID:132344643,GenBank:XP_059740278.1;Name=XP_059740278.1;gbkey=CDS;gene=LOC132344643;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740278.1;gene_id=Cattle_Y_G00629;transcript_id=Cattle_Y_T00948;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37075959	37076395	.	-	2	ID=Cattle_Y_C01128;Parent=Cattle_Y_T00948;Dbxref=GeneID:132344643,GenBank:XP_059740278.1;Name=XP_059740278.1;gbkey=CDS;gene=LOC132344643;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740278.1;gene_id=Cattle_Y_G00629;transcript_id=Cattle_Y_T00948;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37076447	37076570	.	-	0	ID=Cattle_Y_C01129;Parent=Cattle_Y_T00948;Dbxref=GeneID:132344643,GenBank:XP_059740278.1;Name=XP_059740278.1;gbkey=CDS;gene=LOC132344643;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740278.1;gene_id=Cattle_Y_G00629;transcript_id=Cattle_Y_T00948;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	37261829	37265390	.	+	.	ID=Cattle_Y_G00630;Dbxref=GeneID:132344630;Name=LOC132344630;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344630;gene_biotype=protein_coding;gene_id=Cattle_Y_G00630;source_id=gene-LOC132344630
haplotype2-0000357	CAT	mRNA	37261829	37265390	.	+	.	ID=Cattle_Y_T00949;Parent=Cattle_Y_G00630;Dbxref=GeneID:132344630,GenBank:XM_059884288.1;Name=XM_059884288.1;gbkey=mRNA;gene=LOC132344630;model_evidence=Supporting evidence includes similarity to: 5 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00949;gene_id=Cattle_Y_G00630;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884288.1
haplotype2-0000357	CAT	exon	37261829	37262015	.	+	.	ID=Cattle_Y_E01475;Parent=Cattle_Y_T00949;Dbxref=GeneID:132344630,GenBank:XM_059884288.1;gbkey=mRNA;gene=LOC132344630;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00949;gene_id=Cattle_Y_G00630;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884288.1-1
haplotype2-0000357	CAT	exon	37262067	37262503	.	+	.	ID=Cattle_Y_E01476;Parent=Cattle_Y_T00949;Dbxref=GeneID:132344630,GenBank:XM_059884288.1;gbkey=mRNA;gene=LOC132344630;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00949;gene_id=Cattle_Y_G00630;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884288.1-2
haplotype2-0000357	CAT	exon	37264585	37264662	.	+	.	ID=Cattle_Y_E01477;Parent=Cattle_Y_T00949;Dbxref=GeneID:132344630,GenBank:XM_059884288.1;gbkey=mRNA;gene=LOC132344630;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00949;gene_id=Cattle_Y_G00630;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884288.1-3
haplotype2-0000357	CAT	exon	37264851	37264956	.	+	.	ID=Cattle_Y_E01478;Parent=Cattle_Y_T00949;Dbxref=GeneID:132344630,GenBank:XM_059884288.1;gbkey=mRNA;gene=LOC132344630;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00949;gene_id=Cattle_Y_G00630;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884288.1-4
haplotype2-0000357	CAT	exon	37265051	37265196	.	+	.	ID=Cattle_Y_E01479;Parent=Cattle_Y_T00949;Dbxref=GeneID:132344630,GenBank:XM_059884288.1;gbkey=mRNA;gene=LOC132344630;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00949;gene_id=Cattle_Y_G00630;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884288.1-5
haplotype2-0000357	CAT	exon	37265313	37265390	.	+	.	ID=Cattle_Y_E01480;Parent=Cattle_Y_T00949;Dbxref=GeneID:132344630,GenBank:XM_059884288.1;gbkey=mRNA;gene=LOC132344630;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00949;gene_id=Cattle_Y_G00630;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884288.1-6
haplotype2-0000357	CAT	CDS	37261892	37262015	.	+	0	ID=Cattle_Y_C01130;Parent=Cattle_Y_T00949;Dbxref=GeneID:132344630,GenBank:XP_059740271.1;Name=XP_059740271.1;gbkey=CDS;gene=LOC132344630;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740271.1;gene_id=Cattle_Y_G00630;transcript_id=Cattle_Y_T00949;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37262067	37262503	.	+	2	ID=Cattle_Y_C01131;Parent=Cattle_Y_T00949;Dbxref=GeneID:132344630,GenBank:XP_059740271.1;Name=XP_059740271.1;gbkey=CDS;gene=LOC132344630;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740271.1;gene_id=Cattle_Y_G00630;transcript_id=Cattle_Y_T00949;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37264585	37264662	.	+	0	ID=Cattle_Y_C01132;Parent=Cattle_Y_T00949;Dbxref=GeneID:132344630,GenBank:XP_059740271.1;Name=XP_059740271.1;gbkey=CDS;gene=LOC132344630;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740271.1;gene_id=Cattle_Y_G00630;transcript_id=Cattle_Y_T00949;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37264851	37264956	.	+	0	ID=Cattle_Y_C01133;Parent=Cattle_Y_T00949;Dbxref=GeneID:132344630,GenBank:XP_059740271.1;Name=XP_059740271.1;gbkey=CDS;gene=LOC132344630;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740271.1;gene_id=Cattle_Y_G00630;transcript_id=Cattle_Y_T00949;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37265051	37265196	.	+	2	ID=Cattle_Y_C01134;Parent=Cattle_Y_T00949;Dbxref=GeneID:132344630,GenBank:XP_059740271.1;Name=XP_059740271.1;gbkey=CDS;gene=LOC132344630;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740271.1;gene_id=Cattle_Y_G00630;transcript_id=Cattle_Y_T00949;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37265313	37265390	.	+	0	ID=Cattle_Y_C01135;Parent=Cattle_Y_T00949;Dbxref=GeneID:132344630,GenBank:XP_059740271.1;Name=XP_059740271.1;gbkey=CDS;gene=LOC132344630;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740271.1;gene_id=Cattle_Y_G00630;transcript_id=Cattle_Y_T00949;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	37266410	37275965	.	-	.	ID=Cattle_Y_G00631;Dbxref=GeneID:132344445;Name=LOC132344445;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344445;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00631;source_id=gene-LOC132344445
haplotype2-0000357	CAT	exon	37266410	37266547	.	-	.	ID=Cattle_Y_T00950;Parent=Cattle_Y_G00631;Dbxref=GeneID:132344445;gbkey=exon;gene=LOC132344445;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 67%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00631;transcript_id=Cattle_Y_T00950;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344445
haplotype2-0000357	CAT	exon	37267599	37267762	.	-	.	ID=Cattle_Y_T00951;Parent=Cattle_Y_G00631;Dbxref=GeneID:132344445;gbkey=exon;gene=LOC132344445;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 67%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00631;transcript_id=Cattle_Y_T00951;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344445-2
haplotype2-0000357	CAT	exon	37274737	37275965	.	-	.	ID=Cattle_Y_T00952;Parent=Cattle_Y_G00631;Dbxref=GeneID:132344445;gbkey=exon;gene=LOC132344445;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 67%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00631;transcript_id=Cattle_Y_T00952;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344445-3
haplotype2-0000357	CAT	gene	37323765	37328935	.	+	.	ID=Cattle_Y_G00632;Dbxref=GeneID:132344505;Name=LOC132344505;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC132344505;gene_biotype=protein_coding;gene_id=Cattle_Y_G00632;source_id=gene-LOC132344505
haplotype2-0000357	CAT	mRNA	37323765	37328935	.	+	.	ID=Cattle_Y_T00953;Parent=Cattle_Y_G00632;Dbxref=GeneID:132344505,GenBank:XM_059884134.1;Name=XM_059884134.1;gbkey=mRNA;gene=LOC132344505;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 15 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X1;transcript_id=Cattle_Y_T00953;gene_id=Cattle_Y_G00632;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884134.1
haplotype2-0000357	CAT	exon	37323765	37323974	.	+	.	ID=Cattle_Y_E01481;Parent=Cattle_Y_T00953;Dbxref=GeneID:132344505,GenBank:XM_059884134.1;gbkey=mRNA;gene=LOC132344505;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00953;gene_id=Cattle_Y_G00632;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884134.1-1
haplotype2-0000357	CAT	exon	37324791	37324857	.	+	.	ID=Cattle_Y_E01482;Parent=Cattle_Y_T00953;Dbxref=GeneID:132344505,GenBank:XM_059884134.1;gbkey=mRNA;gene=LOC132344505;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00953;gene_id=Cattle_Y_G00632;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884134.1-2
haplotype2-0000357	CAT	exon	37326232	37326551	.	+	.	ID=Cattle_Y_E01483;Parent=Cattle_Y_T00953;Dbxref=GeneID:132344505,GenBank:XM_059884134.1;gbkey=mRNA;gene=LOC132344505;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00953;gene_id=Cattle_Y_G00632;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884134.1-3
haplotype2-0000357	CAT	exon	37326836	37327438	.	+	.	ID=Cattle_Y_E01484;Parent=Cattle_Y_T00953;Dbxref=GeneID:132344505,GenBank:XM_059884134.1;gbkey=mRNA;gene=LOC132344505;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00953;gene_id=Cattle_Y_G00632;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884134.1-4
haplotype2-0000357	CAT	exon	37328197	37328935	.	+	.	ID=Cattle_Y_E01485;Parent=Cattle_Y_T00953;Dbxref=GeneID:132344505,GenBank:XM_059884134.1;gbkey=mRNA;gene=LOC132344505;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00953;gene_id=Cattle_Y_G00632;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884134.1-5
haplotype2-0000357	CAT	CDS	37324822	37324857	.	+	0	ID=Cattle_Y_C01136;Parent=Cattle_Y_T00953;Dbxref=GeneID:132344505,GenBank:XP_059740117.1;Name=XP_059740117.1;gbkey=CDS;gene=LOC132344505;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740117.1;gene_id=Cattle_Y_G00632;transcript_id=Cattle_Y_T00953;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37326232	37326551	.	+	0	ID=Cattle_Y_C01137;Parent=Cattle_Y_T00953;Dbxref=GeneID:132344505,GenBank:XP_059740117.1;Name=XP_059740117.1;gbkey=CDS;gene=LOC132344505;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740117.1;gene_id=Cattle_Y_G00632;transcript_id=Cattle_Y_T00953;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37326836	37327438	.	+	1	ID=Cattle_Y_C01138;Parent=Cattle_Y_T00953;Dbxref=GeneID:132344505,GenBank:XP_059740117.1;Name=XP_059740117.1;gbkey=CDS;gene=LOC132344505;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740117.1;gene_id=Cattle_Y_G00632;transcript_id=Cattle_Y_T00953;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37328197	37328773	.	+	1	ID=Cattle_Y_C01139;Parent=Cattle_Y_T00953;Dbxref=GeneID:132344505,GenBank:XP_059740117.1;Name=XP_059740117.1;gbkey=CDS;gene=LOC132344505;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740117.1;gene_id=Cattle_Y_G00632;transcript_id=Cattle_Y_T00953;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	37323765	37328935	.	+	.	ID=Cattle_Y_T00954;Parent=Cattle_Y_G00632;Dbxref=GeneID:132344505,GenBank:XM_059884135.1;Name=XM_059884135.1;gbkey=mRNA;gene=LOC132344505;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 13 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X2;transcript_id=Cattle_Y_T00954;gene_id=Cattle_Y_G00632;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884135.1
haplotype2-0000357	CAT	exon	37323765	37323974	.	+	.	ID=Cattle_Y_E01486;Parent=Cattle_Y_T00954;Dbxref=GeneID:132344505,GenBank:XM_059884135.1;gbkey=mRNA;gene=LOC132344505;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00954;gene_id=Cattle_Y_G00632;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884135.1-1
haplotype2-0000357	CAT	exon	37326232	37326551	.	+	.	ID=Cattle_Y_E01487;Parent=Cattle_Y_T00954;Dbxref=GeneID:132344505,GenBank:XM_059884135.1;gbkey=mRNA;gene=LOC132344505;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00954;gene_id=Cattle_Y_G00632;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884135.1-2
haplotype2-0000357	CAT	exon	37326836	37327438	.	+	.	ID=Cattle_Y_E01488;Parent=Cattle_Y_T00954;Dbxref=GeneID:132344505,GenBank:XM_059884135.1;gbkey=mRNA;gene=LOC132344505;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00954;gene_id=Cattle_Y_G00632;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884135.1-3
haplotype2-0000357	CAT	exon	37328197	37328935	.	+	.	ID=Cattle_Y_E01489;Parent=Cattle_Y_T00954;Dbxref=GeneID:132344505,GenBank:XM_059884135.1;gbkey=mRNA;gene=LOC132344505;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00954;gene_id=Cattle_Y_G00632;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884135.1-4
haplotype2-0000357	CAT	CDS	37326259	37326551	.	+	0	ID=Cattle_Y_C01140;Parent=Cattle_Y_T00954;Dbxref=GeneID:132344505,GenBank:XP_059740118.1;Name=XP_059740118.1;gbkey=CDS;gene=LOC132344505;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740118.1;gene_id=Cattle_Y_G00632;transcript_id=Cattle_Y_T00954;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37326836	37327438	.	+	1	ID=Cattle_Y_C01141;Parent=Cattle_Y_T00954;Dbxref=GeneID:132344505,GenBank:XP_059740118.1;Name=XP_059740118.1;gbkey=CDS;gene=LOC132344505;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740118.1;gene_id=Cattle_Y_G00632;transcript_id=Cattle_Y_T00954;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37328197	37328773	.	+	1	ID=Cattle_Y_C01142;Parent=Cattle_Y_T00954;Dbxref=GeneID:132344505,GenBank:XP_059740118.1;Name=XP_059740118.1;gbkey=CDS;gene=LOC132344505;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740118.1;gene_id=Cattle_Y_G00632;transcript_id=Cattle_Y_T00954;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	37337387	37345176	.	-	.	ID=Cattle_Y_G00633;Dbxref=GeneID:132344449;Name=LOC132344449;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344449;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00633;source_id=gene-LOC132344449
haplotype2-0000357	CAT	exon	37337387	37338129	.	-	.	ID=Cattle_Y_T00955;Parent=Cattle_Y_G00633;Dbxref=GeneID:132344449;gbkey=exon;gene=LOC132344449;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00633;transcript_id=Cattle_Y_T00955;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344449
haplotype2-0000357	CAT	exon	37338174	37338539	.	-	.	ID=Cattle_Y_T00956;Parent=Cattle_Y_G00633;Dbxref=GeneID:132344449;gbkey=exon;gene=LOC132344449;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00633;transcript_id=Cattle_Y_T00956;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344449-2
haplotype2-0000357	CAT	exon	37345121	37345176	.	-	.	ID=Cattle_Y_T00957;Parent=Cattle_Y_G00633;Dbxref=GeneID:132344449;gbkey=exon;gene=LOC132344449;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00633;transcript_id=Cattle_Y_T00957;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344449-3
haplotype2-0000357	CAT	gene	37352979	37358197	.	-	.	ID=Cattle_Y_G00634;Dbxref=GeneID:132344504;Name=LOC132344504;description=melanoma antigen preferentially expressed in tumors;gbkey=Gene;gene=LOC132344504;gene_biotype=protein_coding;gene_id=Cattle_Y_G00634;source_id=gene-LOC132344504
haplotype2-0000357	CAT	mRNA	37352979	37358197	.	-	.	ID=Cattle_Y_T00958;Parent=Cattle_Y_G00634;Dbxref=GeneID:132344504,GenBank:XM_059884132.1;Name=XM_059884132.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344504;model_evidence=Supporting evidence includes similarity to: 1 mRNA%2C 1 EST%2C 15 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors%2C transcript variant X1;transcript_id=Cattle_Y_T00958;gene_id=Cattle_Y_G00634;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884132.1
haplotype2-0000357	CAT	exon	37352979	37353804	.	-	.	ID=Cattle_Y_E01490;Parent=Cattle_Y_T00958;Dbxref=GeneID:132344504,GenBank:XM_059884132.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344504;product=melanoma antigen preferentially expressed in tumors, transcript variant X1;transcript_id=Cattle_Y_T00958;gene_id=Cattle_Y_G00634;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884132.1-5
haplotype2-0000357	CAT	exon	37354563	37355165	.	-	.	ID=Cattle_Y_E01491;Parent=Cattle_Y_T00958;Dbxref=GeneID:132344504,GenBank:XM_059884132.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344504;product=melanoma antigen preferentially expressed in tumors, transcript variant X1;transcript_id=Cattle_Y_T00958;gene_id=Cattle_Y_G00634;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884132.1-4
haplotype2-0000357	CAT	exon	37355450	37355769	.	-	.	ID=Cattle_Y_E01492;Parent=Cattle_Y_T00958;Dbxref=GeneID:132344504,GenBank:XM_059884132.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344504;product=melanoma antigen preferentially expressed in tumors, transcript variant X1;transcript_id=Cattle_Y_T00958;gene_id=Cattle_Y_G00634;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884132.1-3
haplotype2-0000357	CAT	exon	37357141	37357207	.	-	.	ID=Cattle_Y_E01493;Parent=Cattle_Y_T00958;Dbxref=GeneID:132344504,GenBank:XM_059884132.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344504;product=melanoma antigen preferentially expressed in tumors, transcript variant X1;transcript_id=Cattle_Y_T00958;gene_id=Cattle_Y_G00634;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884132.1-2
haplotype2-0000357	CAT	exon	37358024	37358197	.	-	.	ID=Cattle_Y_E01494;Parent=Cattle_Y_T00958;Dbxref=GeneID:132344504,GenBank:XM_059884132.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344504;product=melanoma antigen preferentially expressed in tumors, transcript variant X1;transcript_id=Cattle_Y_T00958;gene_id=Cattle_Y_G00634;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884132.1-1
haplotype2-0000357	CAT	CDS	37353228	37353804	.	-	1	ID=Cattle_Y_C01143;Parent=Cattle_Y_T00958;Dbxref=GeneID:132344504,GenBank:XP_059740115.1;Name=XP_059740115.1;gbkey=CDS;gene=LOC132344504;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059740115.1;gene_id=Cattle_Y_G00634;transcript_id=Cattle_Y_T00958;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37354563	37355165	.	-	1	ID=Cattle_Y_C01144;Parent=Cattle_Y_T00958;Dbxref=GeneID:132344504,GenBank:XP_059740115.1;Name=XP_059740115.1;gbkey=CDS;gene=LOC132344504;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059740115.1;gene_id=Cattle_Y_G00634;transcript_id=Cattle_Y_T00958;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37355450	37355769	.	-	0	ID=Cattle_Y_C01145;Parent=Cattle_Y_T00958;Dbxref=GeneID:132344504,GenBank:XP_059740115.1;Name=XP_059740115.1;gbkey=CDS;gene=LOC132344504;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059740115.1;gene_id=Cattle_Y_G00634;transcript_id=Cattle_Y_T00958;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37357141	37357176	.	-	0	ID=Cattle_Y_C01146;Parent=Cattle_Y_T00958;Dbxref=GeneID:132344504,GenBank:XP_059740115.1;Name=XP_059740115.1;gbkey=CDS;gene=LOC132344504;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059740115.1;gene_id=Cattle_Y_G00634;transcript_id=Cattle_Y_T00958;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	37352979	37358197	.	-	.	ID=Cattle_Y_T00959;Parent=Cattle_Y_G00634;Dbxref=GeneID:132344504,GenBank:XM_059884133.1;Name=XM_059884133.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344504;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 13 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors%2C transcript variant X2;transcript_id=Cattle_Y_T00959;gene_id=Cattle_Y_G00634;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884133.1
haplotype2-0000357	CAT	exon	37352979	37353804	.	-	.	ID=Cattle_Y_E01495;Parent=Cattle_Y_T00959;Dbxref=GeneID:132344504,GenBank:XM_059884133.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344504;product=melanoma antigen preferentially expressed in tumors, transcript variant X2;transcript_id=Cattle_Y_T00959;gene_id=Cattle_Y_G00634;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884133.1-4
haplotype2-0000357	CAT	exon	37354563	37355165	.	-	.	ID=Cattle_Y_E01496;Parent=Cattle_Y_T00959;Dbxref=GeneID:132344504,GenBank:XM_059884133.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344504;product=melanoma antigen preferentially expressed in tumors, transcript variant X2;transcript_id=Cattle_Y_T00959;gene_id=Cattle_Y_G00634;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884133.1-3
haplotype2-0000357	CAT	exon	37355450	37355769	.	-	.	ID=Cattle_Y_E01497;Parent=Cattle_Y_T00959;Dbxref=GeneID:132344504,GenBank:XM_059884133.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344504;product=melanoma antigen preferentially expressed in tumors, transcript variant X2;transcript_id=Cattle_Y_T00959;gene_id=Cattle_Y_G00634;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884133.1-2
haplotype2-0000357	CAT	exon	37358024	37358197	.	-	.	ID=Cattle_Y_E01498;Parent=Cattle_Y_T00959;Dbxref=GeneID:132344504,GenBank:XM_059884133.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344504;product=melanoma antigen preferentially expressed in tumors, transcript variant X2;transcript_id=Cattle_Y_T00959;gene_id=Cattle_Y_G00634;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884133.1-1
haplotype2-0000357	CAT	CDS	37353228	37353804	.	-	1	ID=Cattle_Y_C01147;Parent=Cattle_Y_T00959;Dbxref=GeneID:132344504,GenBank:XP_059740116.1;Name=XP_059740116.1;gbkey=CDS;gene=LOC132344504;product=melanoma antigen preferentially expressed in tumors isoform X2;protein_id=XP_059740116.1;gene_id=Cattle_Y_G00634;transcript_id=Cattle_Y_T00959;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37354563	37355165	.	-	1	ID=Cattle_Y_C01148;Parent=Cattle_Y_T00959;Dbxref=GeneID:132344504,GenBank:XP_059740116.1;Name=XP_059740116.1;gbkey=CDS;gene=LOC132344504;product=melanoma antigen preferentially expressed in tumors isoform X2;protein_id=XP_059740116.1;gene_id=Cattle_Y_G00634;transcript_id=Cattle_Y_T00959;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37355450	37355742	.	-	0	ID=Cattle_Y_C01149;Parent=Cattle_Y_T00959;Dbxref=GeneID:132344504,GenBank:XP_059740116.1;Name=XP_059740116.1;gbkey=CDS;gene=LOC132344504;product=melanoma antigen preferentially expressed in tumors isoform X2;protein_id=XP_059740116.1;gene_id=Cattle_Y_G00634;transcript_id=Cattle_Y_T00959;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	37405144	37414719	.	+	.	ID=Cattle_Y_G00635;Dbxref=GeneID:132344448;Name=LOC132344448;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344448;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00635;source_id=gene-LOC132344448
haplotype2-0000357	CAT	exon	37405144	37406395	.	+	.	ID=Cattle_Y_T00960;Parent=Cattle_Y_G00635;Dbxref=GeneID:132344448;gbkey=exon;gene=LOC132344448;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 52%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00635;transcript_id=Cattle_Y_T00960;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344448-3
haplotype2-0000357	CAT	exon	37413367	37413530	.	+	.	ID=Cattle_Y_T00961;Parent=Cattle_Y_G00635;Dbxref=GeneID:132344448;gbkey=exon;gene=LOC132344448;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 52%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00635;transcript_id=Cattle_Y_T00961;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344448-2
haplotype2-0000357	CAT	exon	37414582	37414719	.	+	.	ID=Cattle_Y_T00962;Parent=Cattle_Y_G00635;Dbxref=GeneID:132344448;gbkey=exon;gene=LOC132344448;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 52%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00635;transcript_id=Cattle_Y_T00962;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344448
haplotype2-0000357	CAT	gene	37415739	37419309	.	-	.	ID=Cattle_Y_G00636;Dbxref=GeneID:132344641;Name=LOC132344641;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344641;gene_biotype=protein_coding;gene_id=Cattle_Y_G00636;source_id=gene-LOC132344641
haplotype2-0000357	CAT	mRNA	37415739	37419309	.	-	.	ID=Cattle_Y_T00963;Parent=Cattle_Y_G00636;Dbxref=GeneID:132344641,GenBank:XM_059884294.1;Name=XM_059884294.1;gbkey=mRNA;gene=LOC132344641;model_evidence=Supporting evidence includes similarity to: 6 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00963;gene_id=Cattle_Y_G00636;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884294.1
haplotype2-0000357	CAT	exon	37415739	37415816	.	-	.	ID=Cattle_Y_E01499;Parent=Cattle_Y_T00963;Dbxref=GeneID:132344641,GenBank:XM_059884294.1;gbkey=mRNA;gene=LOC132344641;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00963;gene_id=Cattle_Y_G00636;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884294.1-6
haplotype2-0000357	CAT	exon	37415933	37416078	.	-	.	ID=Cattle_Y_E01500;Parent=Cattle_Y_T00963;Dbxref=GeneID:132344641,GenBank:XM_059884294.1;gbkey=mRNA;gene=LOC132344641;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00963;gene_id=Cattle_Y_G00636;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884294.1-5
haplotype2-0000357	CAT	exon	37416173	37416278	.	-	.	ID=Cattle_Y_E01501;Parent=Cattle_Y_T00963;Dbxref=GeneID:132344641,GenBank:XM_059884294.1;gbkey=mRNA;gene=LOC132344641;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00963;gene_id=Cattle_Y_G00636;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884294.1-4
haplotype2-0000357	CAT	exon	37416467	37416544	.	-	.	ID=Cattle_Y_E01502;Parent=Cattle_Y_T00963;Dbxref=GeneID:132344641,GenBank:XM_059884294.1;gbkey=mRNA;gene=LOC132344641;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00963;gene_id=Cattle_Y_G00636;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884294.1-3
haplotype2-0000357	CAT	exon	37418635	37419071	.	-	.	ID=Cattle_Y_E01503;Parent=Cattle_Y_T00963;Dbxref=GeneID:132344641,GenBank:XM_059884294.1;gbkey=mRNA;gene=LOC132344641;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00963;gene_id=Cattle_Y_G00636;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884294.1-2
haplotype2-0000357	CAT	exon	37419123	37419309	.	-	.	ID=Cattle_Y_E01504;Parent=Cattle_Y_T00963;Dbxref=GeneID:132344641,GenBank:XM_059884294.1;gbkey=mRNA;gene=LOC132344641;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00963;gene_id=Cattle_Y_G00636;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884294.1-1
haplotype2-0000357	CAT	CDS	37415739	37415816	.	-	0	ID=Cattle_Y_C01150;Parent=Cattle_Y_T00963;Dbxref=GeneID:132344641,GenBank:XP_059740277.1;Name=XP_059740277.1;gbkey=CDS;gene=LOC132344641;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740277.1;gene_id=Cattle_Y_G00636;transcript_id=Cattle_Y_T00963;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37415933	37416078	.	-	2	ID=Cattle_Y_C01151;Parent=Cattle_Y_T00963;Dbxref=GeneID:132344641,GenBank:XP_059740277.1;Name=XP_059740277.1;gbkey=CDS;gene=LOC132344641;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740277.1;gene_id=Cattle_Y_G00636;transcript_id=Cattle_Y_T00963;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37416173	37416278	.	-	0	ID=Cattle_Y_C01152;Parent=Cattle_Y_T00963;Dbxref=GeneID:132344641,GenBank:XP_059740277.1;Name=XP_059740277.1;gbkey=CDS;gene=LOC132344641;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740277.1;gene_id=Cattle_Y_G00636;transcript_id=Cattle_Y_T00963;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37416467	37416544	.	-	0	ID=Cattle_Y_C01153;Parent=Cattle_Y_T00963;Dbxref=GeneID:132344641,GenBank:XP_059740277.1;Name=XP_059740277.1;gbkey=CDS;gene=LOC132344641;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740277.1;gene_id=Cattle_Y_G00636;transcript_id=Cattle_Y_T00963;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37418635	37419071	.	-	2	ID=Cattle_Y_C01154;Parent=Cattle_Y_T00963;Dbxref=GeneID:132344641,GenBank:XP_059740277.1;Name=XP_059740277.1;gbkey=CDS;gene=LOC132344641;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740277.1;gene_id=Cattle_Y_G00636;transcript_id=Cattle_Y_T00963;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37419123	37419246	.	-	0	ID=Cattle_Y_C01155;Parent=Cattle_Y_T00963;Dbxref=GeneID:132344641,GenBank:XP_059740277.1;Name=XP_059740277.1;gbkey=CDS;gene=LOC132344641;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740277.1;gene_id=Cattle_Y_G00636;transcript_id=Cattle_Y_T00963;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	37436355	37440008	.	-	.	ID=Cattle_Y_G00637;Dbxref=GeneID:132344479;Name=LOC132344479;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344479;gene_biotype=protein_coding;gene_id=Cattle_Y_G00637;source_id=gene-LOC132344479
haplotype2-0000357	CAT	mRNA	37436355	37440007	.	-	.	ID=Cattle_Y_T00964;Parent=Cattle_Y_G00637;Dbxref=GeneID:132344479,GenBank:XM_059884085.1;Name=XM_059884085.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344479;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 2 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T00964;gene_id=Cattle_Y_G00637;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884085.1
haplotype2-0000357	CAT	exon	37436355	37436574	.	-	.	ID=Cattle_Y_E01505;Parent=Cattle_Y_T00964;Dbxref=GeneID:132344479,GenBank:XM_059884085.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344479;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00964;gene_id=Cattle_Y_G00637;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884085.1-6
haplotype2-0000357	CAT	exon	37437833	37437919	.	-	.	ID=Cattle_Y_E01506;Parent=Cattle_Y_T00964;Dbxref=GeneID:132344479,GenBank:XM_059884085.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344479;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00964;gene_id=Cattle_Y_G00637;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884085.1-5
haplotype2-0000357	CAT	exon	37438039	37438184	.	-	.	ID=Cattle_Y_E01507;Parent=Cattle_Y_T00964;Dbxref=GeneID:132344479,GenBank:XM_059884085.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344479;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00964;gene_id=Cattle_Y_G00637;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884085.1-4
haplotype2-0000357	CAT	exon	37438326	37438437	.	-	.	ID=Cattle_Y_E01508;Parent=Cattle_Y_T00964;Dbxref=GeneID:132344479,GenBank:XM_059884085.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344479;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00964;gene_id=Cattle_Y_G00637;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884085.1-3
haplotype2-0000357	CAT	exon	37438580	37438657	.	-	.	ID=Cattle_Y_E01509;Parent=Cattle_Y_T00964;Dbxref=GeneID:132344479,GenBank:XM_059884085.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344479;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00964;gene_id=Cattle_Y_G00637;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884085.1-2
haplotype2-0000357	CAT	exon	37439255	37440007	.	-	.	ID=Cattle_Y_E01510;Parent=Cattle_Y_T00964;Dbxref=GeneID:132344479,GenBank:XM_059884085.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344479;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00964;gene_id=Cattle_Y_G00637;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884085.1-1
haplotype2-0000357	CAT	CDS	37436551	37436574	.	-	0	ID=Cattle_Y_C01156;Parent=Cattle_Y_T00964;Dbxref=GeneID:132344479,GenBank:XP_059740068.1;Name=XP_059740068.1;gbkey=CDS;gene=LOC132344479;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740068.1;gene_id=Cattle_Y_G00637;transcript_id=Cattle_Y_T00964;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37437833	37437919	.	-	0	ID=Cattle_Y_C01157;Parent=Cattle_Y_T00964;Dbxref=GeneID:132344479,GenBank:XP_059740068.1;Name=XP_059740068.1;gbkey=CDS;gene=LOC132344479;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740068.1;gene_id=Cattle_Y_G00637;transcript_id=Cattle_Y_T00964;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37438039	37438184	.	-	2	ID=Cattle_Y_C01158;Parent=Cattle_Y_T00964;Dbxref=GeneID:132344479,GenBank:XP_059740068.1;Name=XP_059740068.1;gbkey=CDS;gene=LOC132344479;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740068.1;gene_id=Cattle_Y_G00637;transcript_id=Cattle_Y_T00964;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37438326	37438437	.	-	0	ID=Cattle_Y_C01159;Parent=Cattle_Y_T00964;Dbxref=GeneID:132344479,GenBank:XP_059740068.1;Name=XP_059740068.1;gbkey=CDS;gene=LOC132344479;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740068.1;gene_id=Cattle_Y_G00637;transcript_id=Cattle_Y_T00964;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37438580	37438657	.	-	0	ID=Cattle_Y_C01160;Parent=Cattle_Y_T00964;Dbxref=GeneID:132344479,GenBank:XP_059740068.1;Name=XP_059740068.1;gbkey=CDS;gene=LOC132344479;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740068.1;gene_id=Cattle_Y_G00637;transcript_id=Cattle_Y_T00964;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37439255	37439782	.	-	0	ID=Cattle_Y_C01161;Parent=Cattle_Y_T00964;Dbxref=GeneID:132344479,GenBank:XP_059740068.1;Name=XP_059740068.1;gbkey=CDS;gene=LOC132344479;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740068.1;gene_id=Cattle_Y_G00637;transcript_id=Cattle_Y_T00964;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	37436355	37440008	.	-	.	ID=Cattle_Y_T00965;Parent=Cattle_Y_G00637;Dbxref=GeneID:132344479,GenBank:XM_059884086.1;Name=XM_059884086.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344479;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T00965;gene_id=Cattle_Y_G00637;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884086.1
haplotype2-0000357	CAT	exon	37436355	37436574	.	-	.	ID=Cattle_Y_E01511;Parent=Cattle_Y_T00965;Dbxref=GeneID:132344479,GenBank:XM_059884086.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344479;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00965;gene_id=Cattle_Y_G00637;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884086.1-5
haplotype2-0000357	CAT	exon	37437833	37437919	.	-	.	ID=Cattle_Y_E01512;Parent=Cattle_Y_T00965;Dbxref=GeneID:132344479,GenBank:XM_059884086.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344479;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00965;gene_id=Cattle_Y_G00637;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884086.1-4
haplotype2-0000357	CAT	exon	37438039	37438184	.	-	.	ID=Cattle_Y_E01513;Parent=Cattle_Y_T00965;Dbxref=GeneID:132344479,GenBank:XM_059884086.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344479;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00965;gene_id=Cattle_Y_G00637;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884086.1-3
haplotype2-0000357	CAT	exon	37438326	37438437	.	-	.	ID=Cattle_Y_E01514;Parent=Cattle_Y_T00965;Dbxref=GeneID:132344479,GenBank:XM_059884086.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344479;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00965;gene_id=Cattle_Y_G00637;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884086.1-2
haplotype2-0000357	CAT	exon	37439234	37440008	.	-	.	ID=Cattle_Y_E01515;Parent=Cattle_Y_T00965;Dbxref=GeneID:132344479,GenBank:XM_059884086.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344479;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00965;gene_id=Cattle_Y_G00637;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884086.1-1
haplotype2-0000357	CAT	CDS	37436551	37436574	.	-	0	ID=Cattle_Y_C01162;Parent=Cattle_Y_T00965;Dbxref=GeneID:132344479,GenBank:XP_059740069.1;Name=XP_059740069.1;gbkey=CDS;gene=LOC132344479;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740069.1;gene_id=Cattle_Y_G00637;transcript_id=Cattle_Y_T00965;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37437833	37437919	.	-	0	ID=Cattle_Y_C01163;Parent=Cattle_Y_T00965;Dbxref=GeneID:132344479,GenBank:XP_059740069.1;Name=XP_059740069.1;gbkey=CDS;gene=LOC132344479;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740069.1;gene_id=Cattle_Y_G00637;transcript_id=Cattle_Y_T00965;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37438039	37438184	.	-	2	ID=Cattle_Y_C01164;Parent=Cattle_Y_T00965;Dbxref=GeneID:132344479,GenBank:XP_059740069.1;Name=XP_059740069.1;gbkey=CDS;gene=LOC132344479;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740069.1;gene_id=Cattle_Y_G00637;transcript_id=Cattle_Y_T00965;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37438326	37438437	.	-	0	ID=Cattle_Y_C01165;Parent=Cattle_Y_T00965;Dbxref=GeneID:132344479,GenBank:XP_059740069.1;Name=XP_059740069.1;gbkey=CDS;gene=LOC132344479;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740069.1;gene_id=Cattle_Y_G00637;transcript_id=Cattle_Y_T00965;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37439234	37439782	.	-	0	ID=Cattle_Y_C01166;Parent=Cattle_Y_T00965;Dbxref=GeneID:132344479,GenBank:XP_059740069.1;Name=XP_059740069.1;gbkey=CDS;gene=LOC132344479;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740069.1;gene_id=Cattle_Y_G00637;transcript_id=Cattle_Y_T00965;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	37452058	37455704	.	-	.	ID=Cattle_Y_G00638;Dbxref=GeneID:132344501;Name=LOC132344501;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344501;gene_biotype=protein_coding;gene_id=Cattle_Y_G00638;source_id=gene-LOC132344501
haplotype2-0000357	CAT	mRNA	37452058	37455703	.	-	.	ID=Cattle_Y_T00966;Parent=Cattle_Y_G00638;Dbxref=GeneID:132344501,GenBank:XM_059884126.1;Name=XM_059884126.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344501;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 4 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T00966;gene_id=Cattle_Y_G00638;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884126.1
haplotype2-0000357	CAT	exon	37452058	37452277	.	-	.	ID=Cattle_Y_E01516;Parent=Cattle_Y_T00966;Dbxref=GeneID:132344501,GenBank:XM_059884126.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344501;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00966;gene_id=Cattle_Y_G00638;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884126.1-6
haplotype2-0000357	CAT	exon	37453536	37453622	.	-	.	ID=Cattle_Y_E01517;Parent=Cattle_Y_T00966;Dbxref=GeneID:132344501,GenBank:XM_059884126.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344501;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00966;gene_id=Cattle_Y_G00638;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884126.1-5
haplotype2-0000357	CAT	exon	37453742	37453887	.	-	.	ID=Cattle_Y_E01518;Parent=Cattle_Y_T00966;Dbxref=GeneID:132344501,GenBank:XM_059884126.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344501;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00966;gene_id=Cattle_Y_G00638;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884126.1-4
haplotype2-0000357	CAT	exon	37454029	37454140	.	-	.	ID=Cattle_Y_E01519;Parent=Cattle_Y_T00966;Dbxref=GeneID:132344501,GenBank:XM_059884126.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344501;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00966;gene_id=Cattle_Y_G00638;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884126.1-3
haplotype2-0000357	CAT	exon	37454283	37454360	.	-	.	ID=Cattle_Y_E01520;Parent=Cattle_Y_T00966;Dbxref=GeneID:132344501,GenBank:XM_059884126.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344501;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00966;gene_id=Cattle_Y_G00638;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884126.1-2
haplotype2-0000357	CAT	exon	37454958	37455703	.	-	.	ID=Cattle_Y_E01521;Parent=Cattle_Y_T00966;Dbxref=GeneID:132344501,GenBank:XM_059884126.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344501;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00966;gene_id=Cattle_Y_G00638;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884126.1-1
haplotype2-0000357	CAT	CDS	37452254	37452277	.	-	0	ID=Cattle_Y_C01167;Parent=Cattle_Y_T00966;Dbxref=GeneID:132344501,GenBank:XP_059740109.1;Name=XP_059740109.1;gbkey=CDS;gene=LOC132344501;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740109.1;gene_id=Cattle_Y_G00638;transcript_id=Cattle_Y_T00966;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37453536	37453622	.	-	0	ID=Cattle_Y_C01168;Parent=Cattle_Y_T00966;Dbxref=GeneID:132344501,GenBank:XP_059740109.1;Name=XP_059740109.1;gbkey=CDS;gene=LOC132344501;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740109.1;gene_id=Cattle_Y_G00638;transcript_id=Cattle_Y_T00966;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37453742	37453887	.	-	2	ID=Cattle_Y_C01169;Parent=Cattle_Y_T00966;Dbxref=GeneID:132344501,GenBank:XP_059740109.1;Name=XP_059740109.1;gbkey=CDS;gene=LOC132344501;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740109.1;gene_id=Cattle_Y_G00638;transcript_id=Cattle_Y_T00966;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37454029	37454140	.	-	0	ID=Cattle_Y_C01170;Parent=Cattle_Y_T00966;Dbxref=GeneID:132344501,GenBank:XP_059740109.1;Name=XP_059740109.1;gbkey=CDS;gene=LOC132344501;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740109.1;gene_id=Cattle_Y_G00638;transcript_id=Cattle_Y_T00966;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37454283	37454360	.	-	0	ID=Cattle_Y_C01171;Parent=Cattle_Y_T00966;Dbxref=GeneID:132344501,GenBank:XP_059740109.1;Name=XP_059740109.1;gbkey=CDS;gene=LOC132344501;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740109.1;gene_id=Cattle_Y_G00638;transcript_id=Cattle_Y_T00966;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37454958	37455485	.	-	0	ID=Cattle_Y_C01172;Parent=Cattle_Y_T00966;Dbxref=GeneID:132344501,GenBank:XP_059740109.1;Name=XP_059740109.1;gbkey=CDS;gene=LOC132344501;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740109.1;gene_id=Cattle_Y_G00638;transcript_id=Cattle_Y_T00966;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	37452058	37455704	.	-	.	ID=Cattle_Y_T00967;Parent=Cattle_Y_G00638;Dbxref=GeneID:132344501,GenBank:XM_059884127.1;Name=XM_059884127.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344501;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T00967;gene_id=Cattle_Y_G00638;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884127.1
haplotype2-0000357	CAT	exon	37452058	37452277	.	-	.	ID=Cattle_Y_E01522;Parent=Cattle_Y_T00967;Dbxref=GeneID:132344501,GenBank:XM_059884127.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344501;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00967;gene_id=Cattle_Y_G00638;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884127.1-5
haplotype2-0000357	CAT	exon	37453536	37453622	.	-	.	ID=Cattle_Y_E01523;Parent=Cattle_Y_T00967;Dbxref=GeneID:132344501,GenBank:XM_059884127.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344501;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00967;gene_id=Cattle_Y_G00638;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884127.1-4
haplotype2-0000357	CAT	exon	37453742	37453887	.	-	.	ID=Cattle_Y_E01524;Parent=Cattle_Y_T00967;Dbxref=GeneID:132344501,GenBank:XM_059884127.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344501;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00967;gene_id=Cattle_Y_G00638;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884127.1-3
haplotype2-0000357	CAT	exon	37454029	37454140	.	-	.	ID=Cattle_Y_E01525;Parent=Cattle_Y_T00967;Dbxref=GeneID:132344501,GenBank:XM_059884127.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344501;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00967;gene_id=Cattle_Y_G00638;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884127.1-2
haplotype2-0000357	CAT	exon	37454937	37455704	.	-	.	ID=Cattle_Y_E01526;Parent=Cattle_Y_T00967;Dbxref=GeneID:132344501,GenBank:XM_059884127.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344501;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00967;gene_id=Cattle_Y_G00638;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884127.1-1
haplotype2-0000357	CAT	CDS	37452254	37452277	.	-	0	ID=Cattle_Y_C01173;Parent=Cattle_Y_T00967;Dbxref=GeneID:132344501,GenBank:XP_059740110.1;Name=XP_059740110.1;gbkey=CDS;gene=LOC132344501;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740110.1;gene_id=Cattle_Y_G00638;transcript_id=Cattle_Y_T00967;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37453536	37453622	.	-	0	ID=Cattle_Y_C01174;Parent=Cattle_Y_T00967;Dbxref=GeneID:132344501,GenBank:XP_059740110.1;Name=XP_059740110.1;gbkey=CDS;gene=LOC132344501;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740110.1;gene_id=Cattle_Y_G00638;transcript_id=Cattle_Y_T00967;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37453742	37453887	.	-	2	ID=Cattle_Y_C01175;Parent=Cattle_Y_T00967;Dbxref=GeneID:132344501,GenBank:XP_059740110.1;Name=XP_059740110.1;gbkey=CDS;gene=LOC132344501;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740110.1;gene_id=Cattle_Y_G00638;transcript_id=Cattle_Y_T00967;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37454029	37454140	.	-	0	ID=Cattle_Y_C01176;Parent=Cattle_Y_T00967;Dbxref=GeneID:132344501,GenBank:XP_059740110.1;Name=XP_059740110.1;gbkey=CDS;gene=LOC132344501;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740110.1;gene_id=Cattle_Y_G00638;transcript_id=Cattle_Y_T00967;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37454937	37455485	.	-	0	ID=Cattle_Y_C01177;Parent=Cattle_Y_T00967;Dbxref=GeneID:132344501,GenBank:XP_059740110.1;Name=XP_059740110.1;gbkey=CDS;gene=LOC132344501;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740110.1;gene_id=Cattle_Y_G00638;transcript_id=Cattle_Y_T00967;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	37467761	37471414	.	-	.	ID=Cattle_Y_G00639;Dbxref=GeneID:132344473;Name=LOC132344473;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344473;gene_biotype=protein_coding;gene_id=Cattle_Y_G00639;source_id=gene-LOC132344473
haplotype2-0000357	CAT	mRNA	37467761	37471413	.	-	.	ID=Cattle_Y_T00968;Parent=Cattle_Y_G00639;Dbxref=GeneID:132344473,GenBank:XM_059884073.1;Name=XM_059884073.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344473;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 4 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T00968;gene_id=Cattle_Y_G00639;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884073.1
haplotype2-0000357	CAT	exon	37467761	37467980	.	-	.	ID=Cattle_Y_E01527;Parent=Cattle_Y_T00968;Dbxref=GeneID:132344473,GenBank:XM_059884073.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344473;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00968;gene_id=Cattle_Y_G00639;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884073.1-6
haplotype2-0000357	CAT	exon	37469239	37469325	.	-	.	ID=Cattle_Y_E01528;Parent=Cattle_Y_T00968;Dbxref=GeneID:132344473,GenBank:XM_059884073.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344473;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00968;gene_id=Cattle_Y_G00639;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884073.1-5
haplotype2-0000357	CAT	exon	37469445	37469590	.	-	.	ID=Cattle_Y_E01529;Parent=Cattle_Y_T00968;Dbxref=GeneID:132344473,GenBank:XM_059884073.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344473;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00968;gene_id=Cattle_Y_G00639;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884073.1-4
haplotype2-0000357	CAT	exon	37469732	37469843	.	-	.	ID=Cattle_Y_E01530;Parent=Cattle_Y_T00968;Dbxref=GeneID:132344473,GenBank:XM_059884073.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344473;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00968;gene_id=Cattle_Y_G00639;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884073.1-3
haplotype2-0000357	CAT	exon	37469986	37470063	.	-	.	ID=Cattle_Y_E01531;Parent=Cattle_Y_T00968;Dbxref=GeneID:132344473,GenBank:XM_059884073.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344473;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00968;gene_id=Cattle_Y_G00639;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884073.1-2
haplotype2-0000357	CAT	exon	37470661	37471413	.	-	.	ID=Cattle_Y_E01532;Parent=Cattle_Y_T00968;Dbxref=GeneID:132344473,GenBank:XM_059884073.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344473;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00968;gene_id=Cattle_Y_G00639;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884073.1-1
haplotype2-0000357	CAT	CDS	37467957	37467980	.	-	0	ID=Cattle_Y_C01178;Parent=Cattle_Y_T00968;Dbxref=GeneID:132344473,GenBank:XP_059740056.1;Name=XP_059740056.1;gbkey=CDS;gene=LOC132344473;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740056.1;gene_id=Cattle_Y_G00639;transcript_id=Cattle_Y_T00968;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37469239	37469325	.	-	0	ID=Cattle_Y_C01179;Parent=Cattle_Y_T00968;Dbxref=GeneID:132344473,GenBank:XP_059740056.1;Name=XP_059740056.1;gbkey=CDS;gene=LOC132344473;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740056.1;gene_id=Cattle_Y_G00639;transcript_id=Cattle_Y_T00968;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37469445	37469590	.	-	2	ID=Cattle_Y_C01180;Parent=Cattle_Y_T00968;Dbxref=GeneID:132344473,GenBank:XP_059740056.1;Name=XP_059740056.1;gbkey=CDS;gene=LOC132344473;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740056.1;gene_id=Cattle_Y_G00639;transcript_id=Cattle_Y_T00968;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37469732	37469843	.	-	0	ID=Cattle_Y_C01181;Parent=Cattle_Y_T00968;Dbxref=GeneID:132344473,GenBank:XP_059740056.1;Name=XP_059740056.1;gbkey=CDS;gene=LOC132344473;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740056.1;gene_id=Cattle_Y_G00639;transcript_id=Cattle_Y_T00968;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37469986	37470063	.	-	0	ID=Cattle_Y_C01182;Parent=Cattle_Y_T00968;Dbxref=GeneID:132344473,GenBank:XP_059740056.1;Name=XP_059740056.1;gbkey=CDS;gene=LOC132344473;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740056.1;gene_id=Cattle_Y_G00639;transcript_id=Cattle_Y_T00968;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37470661	37471188	.	-	0	ID=Cattle_Y_C01183;Parent=Cattle_Y_T00968;Dbxref=GeneID:132344473,GenBank:XP_059740056.1;Name=XP_059740056.1;gbkey=CDS;gene=LOC132344473;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740056.1;gene_id=Cattle_Y_G00639;transcript_id=Cattle_Y_T00968;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	37467761	37471414	.	-	.	ID=Cattle_Y_T00969;Parent=Cattle_Y_G00639;Dbxref=GeneID:132344473,GenBank:XM_059884074.1;Name=XM_059884074.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344473;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T00969;gene_id=Cattle_Y_G00639;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884074.1
haplotype2-0000357	CAT	exon	37467761	37467980	.	-	.	ID=Cattle_Y_E01533;Parent=Cattle_Y_T00969;Dbxref=GeneID:132344473,GenBank:XM_059884074.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344473;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00969;gene_id=Cattle_Y_G00639;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884074.1-5
haplotype2-0000357	CAT	exon	37469239	37469325	.	-	.	ID=Cattle_Y_E01534;Parent=Cattle_Y_T00969;Dbxref=GeneID:132344473,GenBank:XM_059884074.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344473;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00969;gene_id=Cattle_Y_G00639;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884074.1-4
haplotype2-0000357	CAT	exon	37469445	37469590	.	-	.	ID=Cattle_Y_E01535;Parent=Cattle_Y_T00969;Dbxref=GeneID:132344473,GenBank:XM_059884074.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344473;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00969;gene_id=Cattle_Y_G00639;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884074.1-3
haplotype2-0000357	CAT	exon	37469732	37469843	.	-	.	ID=Cattle_Y_E01536;Parent=Cattle_Y_T00969;Dbxref=GeneID:132344473,GenBank:XM_059884074.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344473;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00969;gene_id=Cattle_Y_G00639;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884074.1-2
haplotype2-0000357	CAT	exon	37470640	37471414	.	-	.	ID=Cattle_Y_E01537;Parent=Cattle_Y_T00969;Dbxref=GeneID:132344473,GenBank:XM_059884074.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344473;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00969;gene_id=Cattle_Y_G00639;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884074.1-1
haplotype2-0000357	CAT	CDS	37467957	37467980	.	-	0	ID=Cattle_Y_C01184;Parent=Cattle_Y_T00969;Dbxref=GeneID:132344473,GenBank:XP_059740057.1;Name=XP_059740057.1;gbkey=CDS;gene=LOC132344473;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740057.1;gene_id=Cattle_Y_G00639;transcript_id=Cattle_Y_T00969;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37469239	37469325	.	-	0	ID=Cattle_Y_C01185;Parent=Cattle_Y_T00969;Dbxref=GeneID:132344473,GenBank:XP_059740057.1;Name=XP_059740057.1;gbkey=CDS;gene=LOC132344473;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740057.1;gene_id=Cattle_Y_G00639;transcript_id=Cattle_Y_T00969;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37469445	37469590	.	-	2	ID=Cattle_Y_C01186;Parent=Cattle_Y_T00969;Dbxref=GeneID:132344473,GenBank:XP_059740057.1;Name=XP_059740057.1;gbkey=CDS;gene=LOC132344473;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740057.1;gene_id=Cattle_Y_G00639;transcript_id=Cattle_Y_T00969;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37469732	37469843	.	-	0	ID=Cattle_Y_C01187;Parent=Cattle_Y_T00969;Dbxref=GeneID:132344473,GenBank:XP_059740057.1;Name=XP_059740057.1;gbkey=CDS;gene=LOC132344473;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740057.1;gene_id=Cattle_Y_G00639;transcript_id=Cattle_Y_T00969;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37470640	37471188	.	-	0	ID=Cattle_Y_C01188;Parent=Cattle_Y_T00969;Dbxref=GeneID:132344473,GenBank:XP_059740057.1;Name=XP_059740057.1;gbkey=CDS;gene=LOC132344473;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740057.1;gene_id=Cattle_Y_G00639;transcript_id=Cattle_Y_T00969;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	37483458	37487111	.	-	.	ID=Cattle_Y_G00640;Dbxref=GeneID:132344478;Name=LOC132344478;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344478;gene_biotype=protein_coding;gene_id=Cattle_Y_G00640;source_id=gene-LOC132344478
haplotype2-0000357	CAT	mRNA	37483458	37487110	.	-	.	ID=Cattle_Y_T00970;Parent=Cattle_Y_G00640;Dbxref=GeneID:132344478,GenBank:XM_059884083.1;Name=XM_059884083.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344478;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T00970;gene_id=Cattle_Y_G00640;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884083.1
haplotype2-0000357	CAT	exon	37483458	37483677	.	-	.	ID=Cattle_Y_E01538;Parent=Cattle_Y_T00970;Dbxref=GeneID:132344478,GenBank:XM_059884083.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344478;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00970;gene_id=Cattle_Y_G00640;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884083.1-6
haplotype2-0000357	CAT	exon	37484936	37485022	.	-	.	ID=Cattle_Y_E01539;Parent=Cattle_Y_T00970;Dbxref=GeneID:132344478,GenBank:XM_059884083.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344478;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00970;gene_id=Cattle_Y_G00640;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884083.1-5
haplotype2-0000357	CAT	exon	37485142	37485287	.	-	.	ID=Cattle_Y_E01540;Parent=Cattle_Y_T00970;Dbxref=GeneID:132344478,GenBank:XM_059884083.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344478;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00970;gene_id=Cattle_Y_G00640;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884083.1-4
haplotype2-0000357	CAT	exon	37485429	37485540	.	-	.	ID=Cattle_Y_E01541;Parent=Cattle_Y_T00970;Dbxref=GeneID:132344478,GenBank:XM_059884083.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344478;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00970;gene_id=Cattle_Y_G00640;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884083.1-3
haplotype2-0000357	CAT	exon	37485683	37485760	.	-	.	ID=Cattle_Y_E01542;Parent=Cattle_Y_T00970;Dbxref=GeneID:132344478,GenBank:XM_059884083.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344478;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00970;gene_id=Cattle_Y_G00640;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884083.1-2
haplotype2-0000357	CAT	exon	37486358	37487110	.	-	.	ID=Cattle_Y_E01543;Parent=Cattle_Y_T00970;Dbxref=GeneID:132344478,GenBank:XM_059884083.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344478;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00970;gene_id=Cattle_Y_G00640;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884083.1-1
haplotype2-0000357	CAT	CDS	37483654	37483677	.	-	0	ID=Cattle_Y_C01189;Parent=Cattle_Y_T00970;Dbxref=GeneID:132344478,GenBank:XP_059740066.1;Name=XP_059740066.1;gbkey=CDS;gene=LOC132344478;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740066.1;gene_id=Cattle_Y_G00640;transcript_id=Cattle_Y_T00970;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37484936	37485022	.	-	0	ID=Cattle_Y_C01190;Parent=Cattle_Y_T00970;Dbxref=GeneID:132344478,GenBank:XP_059740066.1;Name=XP_059740066.1;gbkey=CDS;gene=LOC132344478;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740066.1;gene_id=Cattle_Y_G00640;transcript_id=Cattle_Y_T00970;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37485142	37485287	.	-	2	ID=Cattle_Y_C01191;Parent=Cattle_Y_T00970;Dbxref=GeneID:132344478,GenBank:XP_059740066.1;Name=XP_059740066.1;gbkey=CDS;gene=LOC132344478;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740066.1;gene_id=Cattle_Y_G00640;transcript_id=Cattle_Y_T00970;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37485429	37485540	.	-	0	ID=Cattle_Y_C01192;Parent=Cattle_Y_T00970;Dbxref=GeneID:132344478,GenBank:XP_059740066.1;Name=XP_059740066.1;gbkey=CDS;gene=LOC132344478;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740066.1;gene_id=Cattle_Y_G00640;transcript_id=Cattle_Y_T00970;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37485683	37485760	.	-	0	ID=Cattle_Y_C01193;Parent=Cattle_Y_T00970;Dbxref=GeneID:132344478,GenBank:XP_059740066.1;Name=XP_059740066.1;gbkey=CDS;gene=LOC132344478;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740066.1;gene_id=Cattle_Y_G00640;transcript_id=Cattle_Y_T00970;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37486358	37486885	.	-	0	ID=Cattle_Y_C01194;Parent=Cattle_Y_T00970;Dbxref=GeneID:132344478,GenBank:XP_059740066.1;Name=XP_059740066.1;gbkey=CDS;gene=LOC132344478;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740066.1;gene_id=Cattle_Y_G00640;transcript_id=Cattle_Y_T00970;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	37483458	37487111	.	-	.	ID=Cattle_Y_T00971;Parent=Cattle_Y_G00640;Dbxref=GeneID:132344478,GenBank:XM_059884084.1;Name=XM_059884084.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344478;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T00971;gene_id=Cattle_Y_G00640;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884084.1
haplotype2-0000357	CAT	exon	37483458	37483677	.	-	.	ID=Cattle_Y_E01544;Parent=Cattle_Y_T00971;Dbxref=GeneID:132344478,GenBank:XM_059884084.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344478;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00971;gene_id=Cattle_Y_G00640;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884084.1-5
haplotype2-0000357	CAT	exon	37484936	37485022	.	-	.	ID=Cattle_Y_E01545;Parent=Cattle_Y_T00971;Dbxref=GeneID:132344478,GenBank:XM_059884084.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344478;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00971;gene_id=Cattle_Y_G00640;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884084.1-4
haplotype2-0000357	CAT	exon	37485142	37485287	.	-	.	ID=Cattle_Y_E01546;Parent=Cattle_Y_T00971;Dbxref=GeneID:132344478,GenBank:XM_059884084.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344478;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00971;gene_id=Cattle_Y_G00640;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884084.1-3
haplotype2-0000357	CAT	exon	37485429	37485540	.	-	.	ID=Cattle_Y_E01547;Parent=Cattle_Y_T00971;Dbxref=GeneID:132344478,GenBank:XM_059884084.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344478;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00971;gene_id=Cattle_Y_G00640;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884084.1-2
haplotype2-0000357	CAT	exon	37486337	37487111	.	-	.	ID=Cattle_Y_E01548;Parent=Cattle_Y_T00971;Dbxref=GeneID:132344478,GenBank:XM_059884084.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344478;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00971;gene_id=Cattle_Y_G00640;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884084.1-1
haplotype2-0000357	CAT	CDS	37483654	37483677	.	-	0	ID=Cattle_Y_C01195;Parent=Cattle_Y_T00971;Dbxref=GeneID:132344478,GenBank:XP_059740067.1;Name=XP_059740067.1;gbkey=CDS;gene=LOC132344478;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740067.1;gene_id=Cattle_Y_G00640;transcript_id=Cattle_Y_T00971;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37484936	37485022	.	-	0	ID=Cattle_Y_C01196;Parent=Cattle_Y_T00971;Dbxref=GeneID:132344478,GenBank:XP_059740067.1;Name=XP_059740067.1;gbkey=CDS;gene=LOC132344478;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740067.1;gene_id=Cattle_Y_G00640;transcript_id=Cattle_Y_T00971;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37485142	37485287	.	-	2	ID=Cattle_Y_C01197;Parent=Cattle_Y_T00971;Dbxref=GeneID:132344478,GenBank:XP_059740067.1;Name=XP_059740067.1;gbkey=CDS;gene=LOC132344478;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740067.1;gene_id=Cattle_Y_G00640;transcript_id=Cattle_Y_T00971;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37485429	37485540	.	-	0	ID=Cattle_Y_C01198;Parent=Cattle_Y_T00971;Dbxref=GeneID:132344478,GenBank:XP_059740067.1;Name=XP_059740067.1;gbkey=CDS;gene=LOC132344478;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740067.1;gene_id=Cattle_Y_G00640;transcript_id=Cattle_Y_T00971;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37486337	37486885	.	-	0	ID=Cattle_Y_C01199;Parent=Cattle_Y_T00971;Dbxref=GeneID:132344478,GenBank:XP_059740067.1;Name=XP_059740067.1;gbkey=CDS;gene=LOC132344478;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740067.1;gene_id=Cattle_Y_G00640;transcript_id=Cattle_Y_T00971;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	37499159	37502798	.	-	.	ID=Cattle_Y_G00641;Dbxref=GeneID:132344513;Name=LOC132344513;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344513;gene_biotype=protein_coding;gene_id=Cattle_Y_G00641;source_id=gene-LOC132344513
haplotype2-0000357	CAT	mRNA	37499159	37502797	.	-	.	ID=Cattle_Y_T00972;Parent=Cattle_Y_G00641;Dbxref=GeneID:132344513,GenBank:XM_059884146.1;Name=XM_059884146.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344513;model_evidence=Supporting evidence includes similarity to: 2 ESTs%2C 7 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T00972;gene_id=Cattle_Y_G00641;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884146.1
haplotype2-0000357	CAT	exon	37499159	37499378	.	-	.	ID=Cattle_Y_E01549;Parent=Cattle_Y_T00972;Dbxref=GeneID:132344513,GenBank:XM_059884146.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00972;gene_id=Cattle_Y_G00641;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884146.1-6
haplotype2-0000357	CAT	exon	37500637	37500723	.	-	.	ID=Cattle_Y_E01550;Parent=Cattle_Y_T00972;Dbxref=GeneID:132344513,GenBank:XM_059884146.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00972;gene_id=Cattle_Y_G00641;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884146.1-5
haplotype2-0000357	CAT	exon	37500843	37500988	.	-	.	ID=Cattle_Y_E01551;Parent=Cattle_Y_T00972;Dbxref=GeneID:132344513,GenBank:XM_059884146.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00972;gene_id=Cattle_Y_G00641;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884146.1-4
haplotype2-0000357	CAT	exon	37501130	37501241	.	-	.	ID=Cattle_Y_E01552;Parent=Cattle_Y_T00972;Dbxref=GeneID:132344513,GenBank:XM_059884146.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00972;gene_id=Cattle_Y_G00641;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884146.1-3
haplotype2-0000357	CAT	exon	37501384	37501461	.	-	.	ID=Cattle_Y_E01553;Parent=Cattle_Y_T00972;Dbxref=GeneID:132344513,GenBank:XM_059884146.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00972;gene_id=Cattle_Y_G00641;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884146.1-2
haplotype2-0000357	CAT	exon	37502059	37502797	.	-	.	ID=Cattle_Y_E01554;Parent=Cattle_Y_T00972;Dbxref=GeneID:132344513,GenBank:XM_059884146.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00972;gene_id=Cattle_Y_G00641;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884146.1-1
haplotype2-0000357	CAT	CDS	37499355	37499378	.	-	0	ID=Cattle_Y_C01200;Parent=Cattle_Y_T00972;Dbxref=GeneID:132344513,GenBank:XP_059740129.1;Name=XP_059740129.1;gbkey=CDS;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740129.1_1;gene_id=Cattle_Y_G00641;transcript_id=Cattle_Y_T00972;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37500637	37500723	.	-	0	ID=Cattle_Y_C01201;Parent=Cattle_Y_T00972;Dbxref=GeneID:132344513,GenBank:XP_059740129.1;Name=XP_059740129.1;gbkey=CDS;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740129.1_1;gene_id=Cattle_Y_G00641;transcript_id=Cattle_Y_T00972;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37500843	37500988	.	-	2	ID=Cattle_Y_C01202;Parent=Cattle_Y_T00972;Dbxref=GeneID:132344513,GenBank:XP_059740129.1;Name=XP_059740129.1;gbkey=CDS;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740129.1_1;gene_id=Cattle_Y_G00641;transcript_id=Cattle_Y_T00972;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37501130	37501241	.	-	0	ID=Cattle_Y_C01203;Parent=Cattle_Y_T00972;Dbxref=GeneID:132344513,GenBank:XP_059740129.1;Name=XP_059740129.1;gbkey=CDS;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740129.1_1;gene_id=Cattle_Y_G00641;transcript_id=Cattle_Y_T00972;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37501384	37501461	.	-	0	ID=Cattle_Y_C01204;Parent=Cattle_Y_T00972;Dbxref=GeneID:132344513,GenBank:XP_059740129.1;Name=XP_059740129.1;gbkey=CDS;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740129.1_1;gene_id=Cattle_Y_G00641;transcript_id=Cattle_Y_T00972;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37502059	37502586	.	-	0	ID=Cattle_Y_C01205;Parent=Cattle_Y_T00972;Dbxref=GeneID:132344513,GenBank:XP_059740129.1;Name=XP_059740129.1;gbkey=CDS;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740129.1_1;gene_id=Cattle_Y_G00641;transcript_id=Cattle_Y_T00972;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	37499159	37502798	.	-	.	ID=Cattle_Y_T00973;Parent=Cattle_Y_G00641;Dbxref=GeneID:132344513,GenBank:XM_059884147.1;Name=XM_059884147.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344513;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T00973;gene_id=Cattle_Y_G00641;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884147.1
haplotype2-0000357	CAT	exon	37499159	37499378	.	-	.	ID=Cattle_Y_E01555;Parent=Cattle_Y_T00973;Dbxref=GeneID:132344513,GenBank:XM_059884147.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00973;gene_id=Cattle_Y_G00641;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884147.1-5
haplotype2-0000357	CAT	exon	37500637	37500723	.	-	.	ID=Cattle_Y_E01556;Parent=Cattle_Y_T00973;Dbxref=GeneID:132344513,GenBank:XM_059884147.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00973;gene_id=Cattle_Y_G00641;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884147.1-4
haplotype2-0000357	CAT	exon	37500843	37500988	.	-	.	ID=Cattle_Y_E01557;Parent=Cattle_Y_T00973;Dbxref=GeneID:132344513,GenBank:XM_059884147.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00973;gene_id=Cattle_Y_G00641;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884147.1-3
haplotype2-0000357	CAT	exon	37501130	37501241	.	-	.	ID=Cattle_Y_E01558;Parent=Cattle_Y_T00973;Dbxref=GeneID:132344513,GenBank:XM_059884147.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00973;gene_id=Cattle_Y_G00641;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884147.1-2
haplotype2-0000357	CAT	exon	37502038	37502798	.	-	.	ID=Cattle_Y_E01559;Parent=Cattle_Y_T00973;Dbxref=GeneID:132344513,GenBank:XM_059884147.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00973;gene_id=Cattle_Y_G00641;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884147.1-1
haplotype2-0000357	CAT	CDS	37499355	37499378	.	-	0	ID=Cattle_Y_C01206;Parent=Cattle_Y_T00973;Dbxref=GeneID:132344513,GenBank:XP_059740130.1;Name=XP_059740130.1;gbkey=CDS;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740130.1_1;gene_id=Cattle_Y_G00641;transcript_id=Cattle_Y_T00973;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37500637	37500723	.	-	0	ID=Cattle_Y_C01207;Parent=Cattle_Y_T00973;Dbxref=GeneID:132344513,GenBank:XP_059740130.1;Name=XP_059740130.1;gbkey=CDS;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740130.1_1;gene_id=Cattle_Y_G00641;transcript_id=Cattle_Y_T00973;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37500843	37500988	.	-	2	ID=Cattle_Y_C01208;Parent=Cattle_Y_T00973;Dbxref=GeneID:132344513,GenBank:XP_059740130.1;Name=XP_059740130.1;gbkey=CDS;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740130.1_1;gene_id=Cattle_Y_G00641;transcript_id=Cattle_Y_T00973;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37501130	37501241	.	-	0	ID=Cattle_Y_C01209;Parent=Cattle_Y_T00973;Dbxref=GeneID:132344513,GenBank:XP_059740130.1;Name=XP_059740130.1;gbkey=CDS;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740130.1_1;gene_id=Cattle_Y_G00641;transcript_id=Cattle_Y_T00973;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	37502038	37502586	.	-	0	ID=Cattle_Y_C01210;Parent=Cattle_Y_T00973;Dbxref=GeneID:132344513,GenBank:XP_059740130.1;Name=XP_059740130.1;gbkey=CDS;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740130.1_1;gene_id=Cattle_Y_G00641;transcript_id=Cattle_Y_T00973;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	38872360	38875913	.	+	.	ID=Cattle_Y_G00642;Dbxref=GeneID:132344639;Name=LOC132344639;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344639;gene_biotype=protein_coding;gene_id=Cattle_Y_G00642;source_id=gene-LOC132344639
haplotype2-0000357	CAT	mRNA	38872360	38875913	.	+	.	ID=Cattle_Y_T00974;Parent=Cattle_Y_G00642;Dbxref=GeneID:132344639,GenBank:XM_059884293.1;Name=XM_059884293.1;gbkey=mRNA;gene=LOC132344639;model_evidence=Supporting evidence includes similarity to: 6 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00974;gene_id=Cattle_Y_G00642;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884293.1
haplotype2-0000357	CAT	exon	38872360	38872546	.	+	.	ID=Cattle_Y_E01560;Parent=Cattle_Y_T00974;Dbxref=GeneID:132344639,GenBank:XM_059884293.1;gbkey=mRNA;gene=LOC132344639;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00974;gene_id=Cattle_Y_G00642;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884293.1-1
haplotype2-0000357	CAT	exon	38872598	38873034	.	+	.	ID=Cattle_Y_E01561;Parent=Cattle_Y_T00974;Dbxref=GeneID:132344639,GenBank:XM_059884293.1;gbkey=mRNA;gene=LOC132344639;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00974;gene_id=Cattle_Y_G00642;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884293.1-2
haplotype2-0000357	CAT	exon	38875108	38875185	.	+	.	ID=Cattle_Y_E01562;Parent=Cattle_Y_T00974;Dbxref=GeneID:132344639,GenBank:XM_059884293.1;gbkey=mRNA;gene=LOC132344639;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00974;gene_id=Cattle_Y_G00642;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884293.1-3
haplotype2-0000357	CAT	exon	38875374	38875479	.	+	.	ID=Cattle_Y_E01563;Parent=Cattle_Y_T00974;Dbxref=GeneID:132344639,GenBank:XM_059884293.1;gbkey=mRNA;gene=LOC132344639;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00974;gene_id=Cattle_Y_G00642;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884293.1-4
haplotype2-0000357	CAT	exon	38875574	38875719	.	+	.	ID=Cattle_Y_E01564;Parent=Cattle_Y_T00974;Dbxref=GeneID:132344639,GenBank:XM_059884293.1;gbkey=mRNA;gene=LOC132344639;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00974;gene_id=Cattle_Y_G00642;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884293.1-5
haplotype2-0000357	CAT	exon	38875836	38875913	.	+	.	ID=Cattle_Y_E01565;Parent=Cattle_Y_T00974;Dbxref=GeneID:132344639,GenBank:XM_059884293.1;gbkey=mRNA;gene=LOC132344639;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00974;gene_id=Cattle_Y_G00642;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884293.1-6
haplotype2-0000357	CAT	CDS	38872423	38872546	.	+	0	ID=Cattle_Y_C01211;Parent=Cattle_Y_T00974;Dbxref=GeneID:132344639,GenBank:XP_059740276.1;Name=XP_059740276.1;gbkey=CDS;gene=LOC132344639;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740276.1;gene_id=Cattle_Y_G00642;transcript_id=Cattle_Y_T00974;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	38872598	38873034	.	+	2	ID=Cattle_Y_C01212;Parent=Cattle_Y_T00974;Dbxref=GeneID:132344639,GenBank:XP_059740276.1;Name=XP_059740276.1;gbkey=CDS;gene=LOC132344639;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740276.1;gene_id=Cattle_Y_G00642;transcript_id=Cattle_Y_T00974;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	38875108	38875185	.	+	0	ID=Cattle_Y_C01213;Parent=Cattle_Y_T00974;Dbxref=GeneID:132344639,GenBank:XP_059740276.1;Name=XP_059740276.1;gbkey=CDS;gene=LOC132344639;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740276.1;gene_id=Cattle_Y_G00642;transcript_id=Cattle_Y_T00974;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	38875374	38875479	.	+	0	ID=Cattle_Y_C01214;Parent=Cattle_Y_T00974;Dbxref=GeneID:132344639,GenBank:XP_059740276.1;Name=XP_059740276.1;gbkey=CDS;gene=LOC132344639;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740276.1;gene_id=Cattle_Y_G00642;transcript_id=Cattle_Y_T00974;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	38875574	38875719	.	+	2	ID=Cattle_Y_C01215;Parent=Cattle_Y_T00974;Dbxref=GeneID:132344639,GenBank:XP_059740276.1;Name=XP_059740276.1;gbkey=CDS;gene=LOC132344639;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740276.1;gene_id=Cattle_Y_G00642;transcript_id=Cattle_Y_T00974;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	38875836	38875913	.	+	0	ID=Cattle_Y_C01216;Parent=Cattle_Y_T00974;Dbxref=GeneID:132344639,GenBank:XP_059740276.1;Name=XP_059740276.1;gbkey=CDS;gene=LOC132344639;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740276.1;gene_id=Cattle_Y_G00642;transcript_id=Cattle_Y_T00974;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	38885381	38886868	.	-	.	ID=Cattle_Y_G00643;Dbxref=GeneID:132344640;Name=LOC132344640;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344640;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00643;source_id=gene-LOC132344640
haplotype2-0000357	CAT	exon	38885381	38886868	.	-	.	ID=Cattle_Y_T00975;Parent=Cattle_Y_G00643;Dbxref=GeneID:132344640;gbkey=exon;gene=LOC132344640;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 67%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00643;transcript_id=Cattle_Y_T00975;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344640
haplotype2-0000357	CAT	gene	38902888	38908135	.	+	.	ID=Cattle_Y_G00644;Dbxref=GeneID:132344490;Name=LOC132344490;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC132344490;gene_biotype=protein_coding;gene_id=Cattle_Y_G00644;source_id=gene-LOC132344490
haplotype2-0000357	CAT	mRNA	38902889	38908135	.	+	.	ID=Cattle_Y_T00976;Parent=Cattle_Y_G00644;Dbxref=GeneID:132344490,GenBank:XM_059884105.1;Name=XM_059884105.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344490;model_evidence=Supporting evidence includes similarity to: 14 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X1;transcript_id=Cattle_Y_T00976;gene_id=Cattle_Y_G00644;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884105.1
haplotype2-0000357	CAT	exon	38902889	38903101	.	+	.	ID=Cattle_Y_E01566;Parent=Cattle_Y_T00976;Dbxref=GeneID:132344490,GenBank:XM_059884105.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344490;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00976;gene_id=Cattle_Y_G00644;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884105.1-1
haplotype2-0000357	CAT	exon	38903918	38903984	.	+	.	ID=Cattle_Y_E01567;Parent=Cattle_Y_T00976;Dbxref=GeneID:132344490,GenBank:XM_059884105.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344490;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00976;gene_id=Cattle_Y_G00644;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884105.1-2
haplotype2-0000357	CAT	exon	38905345	38905664	.	+	.	ID=Cattle_Y_E01568;Parent=Cattle_Y_T00976;Dbxref=GeneID:132344490,GenBank:XM_059884105.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344490;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00976;gene_id=Cattle_Y_G00644;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884105.1-1
haplotype2-0000357	CAT	exon	38905949	38906551	.	+	.	ID=Cattle_Y_E01569;Parent=Cattle_Y_T00976;Dbxref=GeneID:132344490,GenBank:XM_059884105.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344490;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00976;gene_id=Cattle_Y_G00644;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884105.1-1
haplotype2-0000357	CAT	exon	38907310	38908135	.	+	.	ID=Cattle_Y_E01570;Parent=Cattle_Y_T00976;Dbxref=GeneID:132344490,GenBank:XM_059884105.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344490;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00976;gene_id=Cattle_Y_G00644;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884105.1-5
haplotype2-0000357	CAT	CDS	38903949	38903984	.	+	0	ID=Cattle_Y_C01217;Parent=Cattle_Y_T00976;gene_id=Cattle_Y_G00644;transcript_id=Cattle_Y_T00976;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	38905345	38905664	.	+	0	ID=Cattle_Y_C01218;Parent=Cattle_Y_T00976;gene_id=Cattle_Y_G00644;transcript_id=Cattle_Y_T00976;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	38905949	38906551	.	+	1	ID=Cattle_Y_C01219;Parent=Cattle_Y_T00976;gene_id=Cattle_Y_G00644;transcript_id=Cattle_Y_T00976;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	38907310	38907886	.	+	1	ID=Cattle_Y_C01220;Parent=Cattle_Y_T00976;gene_id=Cattle_Y_G00644;transcript_id=Cattle_Y_T00976;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	38902888	38908135	.	+	.	ID=Cattle_Y_T00977;Parent=Cattle_Y_G00644;Dbxref=GeneID:132344490,GenBank:XM_059884106.1;Name=XM_059884106.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344490;model_evidence=Supporting evidence includes similarity to: 13 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X2;transcript_id=Cattle_Y_T00977;gene_id=Cattle_Y_G00644;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884106.1
haplotype2-0000357	CAT	exon	38902888	38903101	.	+	.	ID=Cattle_Y_E01571;Parent=Cattle_Y_T00977;Dbxref=GeneID:132344490,GenBank:XM_059884106.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344490;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00977;gene_id=Cattle_Y_G00644;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884106.1-1
haplotype2-0000357	CAT	exon	38905345	38905664	.	+	.	ID=Cattle_Y_E01572;Parent=Cattle_Y_T00977;Dbxref=GeneID:132344490,GenBank:XM_059884106.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344490;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00977;gene_id=Cattle_Y_G00644;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884106.1-2
haplotype2-0000357	CAT	exon	38905949	38906551	.	+	.	ID=Cattle_Y_E01573;Parent=Cattle_Y_T00977;Dbxref=GeneID:132344490,GenBank:XM_059884106.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344490;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00977;gene_id=Cattle_Y_G00644;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884106.1-1
haplotype2-0000357	CAT	exon	38907310	38908135	.	+	.	ID=Cattle_Y_E01574;Parent=Cattle_Y_T00977;Dbxref=GeneID:132344490,GenBank:XM_059884106.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344490;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00977;gene_id=Cattle_Y_G00644;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884106.1-4
haplotype2-0000357	CAT	CDS	38905372	38905664	.	+	0	ID=Cattle_Y_C01221;Parent=Cattle_Y_T00977;gene_id=Cattle_Y_G00644;transcript_id=Cattle_Y_T00977;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	38905949	38906551	.	+	1	ID=Cattle_Y_C01222;Parent=Cattle_Y_T00977;gene_id=Cattle_Y_G00644;transcript_id=Cattle_Y_T00977;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	38907310	38907886	.	+	1	ID=Cattle_Y_C01223;Parent=Cattle_Y_T00977;gene_id=Cattle_Y_G00644;transcript_id=Cattle_Y_T00977;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	39584812	39588312	.	+	.	ID=Cattle_Y_G00645;Dbxref=GeneID:132344503;Name=LOC132344503;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344503;gene_biotype=protein_coding;gene_id=Cattle_Y_G00645;source_id=gene-LOC132344503
haplotype2-0000357	CAT	mRNA	39584812	39588312	.	+	.	ID=Cattle_Y_T00978;Parent=Cattle_Y_G00645;Dbxref=GeneID:132344503,GenBank:XM_059884130.1;Name=XM_059884130.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344503;model_evidence=Supporting evidence includes similarity to: 4 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T00978;gene_id=Cattle_Y_G00645;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884130.1
haplotype2-0000357	CAT	exon	39584812	39585416	.	+	.	ID=Cattle_Y_E01575;Parent=Cattle_Y_T00978;Dbxref=GeneID:132344503,GenBank:XM_059884130.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344503;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00978;gene_id=Cattle_Y_G00645;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884130.1-1
haplotype2-0000357	CAT	exon	39586010	39586087	.	+	.	ID=Cattle_Y_E01576;Parent=Cattle_Y_T00978;Dbxref=GeneID:132344503,GenBank:XM_059884130.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344503;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00978;gene_id=Cattle_Y_G00645;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884130.1-1
haplotype2-0000357	CAT	exon	39586230	39586341	.	+	.	ID=Cattle_Y_E01577;Parent=Cattle_Y_T00978;Dbxref=GeneID:132344503,GenBank:XM_059884130.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344503;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00978;gene_id=Cattle_Y_G00645;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884130.1-1
haplotype2-0000357	CAT	exon	39586483	39586628	.	+	.	ID=Cattle_Y_E01578;Parent=Cattle_Y_T00978;Dbxref=GeneID:132344503,GenBank:XM_059884130.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344503;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00978;gene_id=Cattle_Y_G00645;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884130.1-1
haplotype2-0000357	CAT	exon	39586748	39586834	.	+	.	ID=Cattle_Y_E01579;Parent=Cattle_Y_T00978;Dbxref=GeneID:132344503,GenBank:XM_059884130.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344503;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00978;gene_id=Cattle_Y_G00645;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884130.1-1
haplotype2-0000357	CAT	exon	39588093	39588312	.	+	.	ID=Cattle_Y_E01580;Parent=Cattle_Y_T00978;Dbxref=GeneID:132344503,GenBank:XM_059884130.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344503;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00978;gene_id=Cattle_Y_G00645;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884130.1-6
haplotype2-0000357	CAT	CDS	39584889	39585416	.	+	0	ID=Cattle_Y_C01224;Parent=Cattle_Y_T00978;gene_id=Cattle_Y_G00645;transcript_id=Cattle_Y_T00978;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39586010	39586087	.	+	0	ID=Cattle_Y_C01225;Parent=Cattle_Y_T00978;gene_id=Cattle_Y_G00645;transcript_id=Cattle_Y_T00978;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39586230	39586341	.	+	0	ID=Cattle_Y_C01226;Parent=Cattle_Y_T00978;gene_id=Cattle_Y_G00645;transcript_id=Cattle_Y_T00978;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39586483	39586628	.	+	2	ID=Cattle_Y_C01227;Parent=Cattle_Y_T00978;gene_id=Cattle_Y_G00645;transcript_id=Cattle_Y_T00978;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39586748	39586834	.	+	0	ID=Cattle_Y_C01228;Parent=Cattle_Y_T00978;gene_id=Cattle_Y_G00645;transcript_id=Cattle_Y_T00978;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39588093	39588116	.	+	0	ID=Cattle_Y_C01229;Parent=Cattle_Y_T00978;gene_id=Cattle_Y_G00645;transcript_id=Cattle_Y_T00978;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	39584812	39588312	.	+	.	ID=Cattle_Y_T00979;Parent=Cattle_Y_G00645;Dbxref=GeneID:132344503,GenBank:XM_059884131.1;Name=XM_059884131.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344503;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T00979;gene_id=Cattle_Y_G00645;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884131.1
haplotype2-0000357	CAT	exon	39584812	39585437	.	+	.	ID=Cattle_Y_E01581;Parent=Cattle_Y_T00979;Dbxref=GeneID:132344503,GenBank:XM_059884131.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344503;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00979;gene_id=Cattle_Y_G00645;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884131.1-1
haplotype2-0000357	CAT	exon	39586230	39586341	.	+	.	ID=Cattle_Y_E01582;Parent=Cattle_Y_T00979;Dbxref=GeneID:132344503,GenBank:XM_059884131.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344503;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00979;gene_id=Cattle_Y_G00645;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884131.1-1
haplotype2-0000357	CAT	exon	39586483	39586628	.	+	.	ID=Cattle_Y_E01583;Parent=Cattle_Y_T00979;Dbxref=GeneID:132344503,GenBank:XM_059884131.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344503;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00979;gene_id=Cattle_Y_G00645;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884131.1-1
haplotype2-0000357	CAT	exon	39586748	39586834	.	+	.	ID=Cattle_Y_E01584;Parent=Cattle_Y_T00979;Dbxref=GeneID:132344503,GenBank:XM_059884131.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344503;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00979;gene_id=Cattle_Y_G00645;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884131.1-1
haplotype2-0000357	CAT	exon	39588093	39588312	.	+	.	ID=Cattle_Y_E01585;Parent=Cattle_Y_T00979;Dbxref=GeneID:132344503,GenBank:XM_059884131.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344503;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00979;gene_id=Cattle_Y_G00645;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884131.1-5
haplotype2-0000357	CAT	CDS	39584889	39585437	.	+	0	ID=Cattle_Y_C01230;Parent=Cattle_Y_T00979;gene_id=Cattle_Y_G00645;transcript_id=Cattle_Y_T00979;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39586230	39586341	.	+	0	ID=Cattle_Y_C01231;Parent=Cattle_Y_T00979;gene_id=Cattle_Y_G00645;transcript_id=Cattle_Y_T00979;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39586483	39586628	.	+	2	ID=Cattle_Y_C01232;Parent=Cattle_Y_T00979;gene_id=Cattle_Y_G00645;transcript_id=Cattle_Y_T00979;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39586748	39586834	.	+	0	ID=Cattle_Y_C01233;Parent=Cattle_Y_T00979;gene_id=Cattle_Y_G00645;transcript_id=Cattle_Y_T00979;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39588093	39588116	.	+	0	ID=Cattle_Y_C01234;Parent=Cattle_Y_T00979;gene_id=Cattle_Y_G00645;transcript_id=Cattle_Y_T00979;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	39600372	39604012	.	+	.	ID=Cattle_Y_G00646;Dbxref=GeneID:132344512;Name=LOC132344512;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344512;gene_biotype=protein_coding;gene_id=Cattle_Y_G00646;source_id=gene-LOC132344512
haplotype2-0000357	CAT	mRNA	39600373	39604012	.	+	.	ID=Cattle_Y_T00980;Parent=Cattle_Y_G00646;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;Name=XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;model_evidence=Supporting evidence includes similarity to: 3 ESTs%2C 3 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T00980;gene_id=Cattle_Y_G00646;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884144.1
haplotype2-0000357	CAT	exon	39600373	39601116	.	+	.	ID=Cattle_Y_E01586;Parent=Cattle_Y_T00980;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00980;gene_id=Cattle_Y_G00646;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-1
haplotype2-0000357	CAT	exon	39601710	39601787	.	+	.	ID=Cattle_Y_E01587;Parent=Cattle_Y_T00980;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00980;gene_id=Cattle_Y_G00646;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-2
haplotype2-0000357	CAT	exon	39601930	39602041	.	+	.	ID=Cattle_Y_E01588;Parent=Cattle_Y_T00980;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00980;gene_id=Cattle_Y_G00646;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-3
haplotype2-0000357	CAT	exon	39602183	39602328	.	+	.	ID=Cattle_Y_E01589;Parent=Cattle_Y_T00980;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00980;gene_id=Cattle_Y_G00646;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-4
haplotype2-0000357	CAT	exon	39602448	39602534	.	+	.	ID=Cattle_Y_E01590;Parent=Cattle_Y_T00980;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00980;gene_id=Cattle_Y_G00646;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-5
haplotype2-0000357	CAT	exon	39603793	39604012	.	+	.	ID=Cattle_Y_E01591;Parent=Cattle_Y_T00980;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00980;gene_id=Cattle_Y_G00646;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-6
haplotype2-0000357	CAT	CDS	39600589	39601116	.	+	0	ID=Cattle_Y_C01235;Parent=Cattle_Y_T00980;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_5;gene_id=Cattle_Y_G00646;transcript_id=Cattle_Y_T00980;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39601710	39601787	.	+	0	ID=Cattle_Y_C01236;Parent=Cattle_Y_T00980;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_5;gene_id=Cattle_Y_G00646;transcript_id=Cattle_Y_T00980;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39601930	39602041	.	+	0	ID=Cattle_Y_C01237;Parent=Cattle_Y_T00980;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_5;gene_id=Cattle_Y_G00646;transcript_id=Cattle_Y_T00980;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39602183	39602328	.	+	2	ID=Cattle_Y_C01238;Parent=Cattle_Y_T00980;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_5;gene_id=Cattle_Y_G00646;transcript_id=Cattle_Y_T00980;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39602448	39602534	.	+	0	ID=Cattle_Y_C01239;Parent=Cattle_Y_T00980;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_5;gene_id=Cattle_Y_G00646;transcript_id=Cattle_Y_T00980;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39603793	39603816	.	+	0	ID=Cattle_Y_C01240;Parent=Cattle_Y_T00980;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_5;gene_id=Cattle_Y_G00646;transcript_id=Cattle_Y_T00980;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	39600372	39604012	.	+	.	ID=Cattle_Y_T00981;Parent=Cattle_Y_G00646;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;Name=XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T00981;gene_id=Cattle_Y_G00646;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884145.1
haplotype2-0000357	CAT	exon	39600372	39601137	.	+	.	ID=Cattle_Y_E01592;Parent=Cattle_Y_T00981;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00981;gene_id=Cattle_Y_G00646;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-1
haplotype2-0000357	CAT	exon	39601930	39602041	.	+	.	ID=Cattle_Y_E01593;Parent=Cattle_Y_T00981;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00981;gene_id=Cattle_Y_G00646;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-2
haplotype2-0000357	CAT	exon	39602183	39602328	.	+	.	ID=Cattle_Y_E01594;Parent=Cattle_Y_T00981;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00981;gene_id=Cattle_Y_G00646;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-3
haplotype2-0000357	CAT	exon	39602448	39602534	.	+	.	ID=Cattle_Y_E01595;Parent=Cattle_Y_T00981;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00981;gene_id=Cattle_Y_G00646;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-4
haplotype2-0000357	CAT	exon	39603793	39604012	.	+	.	ID=Cattle_Y_E01596;Parent=Cattle_Y_T00981;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00981;gene_id=Cattle_Y_G00646;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-5
haplotype2-0000357	CAT	CDS	39600589	39601137	.	+	0	ID=Cattle_Y_C01241;Parent=Cattle_Y_T00981;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1_5;gene_id=Cattle_Y_G00646;transcript_id=Cattle_Y_T00981;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39601930	39602041	.	+	0	ID=Cattle_Y_C01242;Parent=Cattle_Y_T00981;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1_5;gene_id=Cattle_Y_G00646;transcript_id=Cattle_Y_T00981;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39602183	39602328	.	+	2	ID=Cattle_Y_C01243;Parent=Cattle_Y_T00981;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1_5;gene_id=Cattle_Y_G00646;transcript_id=Cattle_Y_T00981;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39602448	39602534	.	+	0	ID=Cattle_Y_C01244;Parent=Cattle_Y_T00981;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1_5;gene_id=Cattle_Y_G00646;transcript_id=Cattle_Y_T00981;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39603793	39603816	.	+	0	ID=Cattle_Y_C01245;Parent=Cattle_Y_T00981;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1_5;gene_id=Cattle_Y_G00646;transcript_id=Cattle_Y_T00981;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	39616072	39619712	.	+	.	ID=Cattle_Y_G00647;Dbxref=GeneID:132344512;Name=LOC132344512;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344512;gene_biotype=protein_coding;gene_id=Cattle_Y_G00647;source_id=gene-LOC132344512
haplotype2-0000357	CAT	mRNA	39616073	39619712	.	+	.	ID=Cattle_Y_T00982;Parent=Cattle_Y_G00647;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;Name=XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;model_evidence=Supporting evidence includes similarity to: 3 ESTs%2C 3 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T00982;gene_id=Cattle_Y_G00647;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884144.1
haplotype2-0000357	CAT	exon	39616073	39616816	.	+	.	ID=Cattle_Y_E01597;Parent=Cattle_Y_T00982;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00982;gene_id=Cattle_Y_G00647;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-1
haplotype2-0000357	CAT	exon	39617410	39617487	.	+	.	ID=Cattle_Y_E01598;Parent=Cattle_Y_T00982;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00982;gene_id=Cattle_Y_G00647;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-2
haplotype2-0000357	CAT	exon	39617630	39617741	.	+	.	ID=Cattle_Y_E01599;Parent=Cattle_Y_T00982;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00982;gene_id=Cattle_Y_G00647;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-3
haplotype2-0000357	CAT	exon	39617883	39618028	.	+	.	ID=Cattle_Y_E01600;Parent=Cattle_Y_T00982;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00982;gene_id=Cattle_Y_G00647;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-4
haplotype2-0000357	CAT	exon	39618148	39618234	.	+	.	ID=Cattle_Y_E01601;Parent=Cattle_Y_T00982;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00982;gene_id=Cattle_Y_G00647;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-5
haplotype2-0000357	CAT	exon	39619493	39619712	.	+	.	ID=Cattle_Y_E01602;Parent=Cattle_Y_T00982;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00982;gene_id=Cattle_Y_G00647;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-6
haplotype2-0000357	CAT	CDS	39616289	39616816	.	+	0	ID=Cattle_Y_C01246;Parent=Cattle_Y_T00982;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_3;gene_id=Cattle_Y_G00647;transcript_id=Cattle_Y_T00982;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39617410	39617487	.	+	0	ID=Cattle_Y_C01247;Parent=Cattle_Y_T00982;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_3;gene_id=Cattle_Y_G00647;transcript_id=Cattle_Y_T00982;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39617630	39617741	.	+	0	ID=Cattle_Y_C01248;Parent=Cattle_Y_T00982;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_3;gene_id=Cattle_Y_G00647;transcript_id=Cattle_Y_T00982;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39617883	39618028	.	+	2	ID=Cattle_Y_C01249;Parent=Cattle_Y_T00982;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_3;gene_id=Cattle_Y_G00647;transcript_id=Cattle_Y_T00982;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39618148	39618234	.	+	0	ID=Cattle_Y_C01250;Parent=Cattle_Y_T00982;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_3;gene_id=Cattle_Y_G00647;transcript_id=Cattle_Y_T00982;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39619493	39619516	.	+	0	ID=Cattle_Y_C01251;Parent=Cattle_Y_T00982;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_3;gene_id=Cattle_Y_G00647;transcript_id=Cattle_Y_T00982;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	39616072	39619712	.	+	.	ID=Cattle_Y_T00983;Parent=Cattle_Y_G00647;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;Name=XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T00983;gene_id=Cattle_Y_G00647;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884145.1
haplotype2-0000357	CAT	exon	39616072	39616837	.	+	.	ID=Cattle_Y_E01603;Parent=Cattle_Y_T00983;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00983;gene_id=Cattle_Y_G00647;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-1
haplotype2-0000357	CAT	exon	39617630	39617741	.	+	.	ID=Cattle_Y_E01604;Parent=Cattle_Y_T00983;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00983;gene_id=Cattle_Y_G00647;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-2
haplotype2-0000357	CAT	exon	39617883	39618028	.	+	.	ID=Cattle_Y_E01605;Parent=Cattle_Y_T00983;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00983;gene_id=Cattle_Y_G00647;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-3
haplotype2-0000357	CAT	exon	39618148	39618234	.	+	.	ID=Cattle_Y_E01606;Parent=Cattle_Y_T00983;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00983;gene_id=Cattle_Y_G00647;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-4
haplotype2-0000357	CAT	exon	39619493	39619712	.	+	.	ID=Cattle_Y_E01607;Parent=Cattle_Y_T00983;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00983;gene_id=Cattle_Y_G00647;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-5
haplotype2-0000357	CAT	CDS	39616289	39616837	.	+	0	ID=Cattle_Y_C01252;Parent=Cattle_Y_T00983;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1_3;gene_id=Cattle_Y_G00647;transcript_id=Cattle_Y_T00983;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39617630	39617741	.	+	0	ID=Cattle_Y_C01253;Parent=Cattle_Y_T00983;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1_3;gene_id=Cattle_Y_G00647;transcript_id=Cattle_Y_T00983;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39617883	39618028	.	+	2	ID=Cattle_Y_C01254;Parent=Cattle_Y_T00983;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1_3;gene_id=Cattle_Y_G00647;transcript_id=Cattle_Y_T00983;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39618148	39618234	.	+	0	ID=Cattle_Y_C01255;Parent=Cattle_Y_T00983;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1_3;gene_id=Cattle_Y_G00647;transcript_id=Cattle_Y_T00983;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39619493	39619516	.	+	0	ID=Cattle_Y_C01256;Parent=Cattle_Y_T00983;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1_3;gene_id=Cattle_Y_G00647;transcript_id=Cattle_Y_T00983;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	39631772	39635412	.	+	.	ID=Cattle_Y_G00648;Dbxref=GeneID:132344512;Name=LOC132344512;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344512;gene_biotype=protein_coding;gene_id=Cattle_Y_G00648;source_id=gene-LOC132344512
haplotype2-0000357	CAT	mRNA	39631773	39635412	.	+	.	ID=Cattle_Y_T00984;Parent=Cattle_Y_G00648;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;Name=XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;model_evidence=Supporting evidence includes similarity to: 3 ESTs%2C 3 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T00984;gene_id=Cattle_Y_G00648;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884144.1
haplotype2-0000357	CAT	exon	39631773	39632516	.	+	.	ID=Cattle_Y_E01608;Parent=Cattle_Y_T00984;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00984;gene_id=Cattle_Y_G00648;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-1
haplotype2-0000357	CAT	exon	39633110	39633187	.	+	.	ID=Cattle_Y_E01609;Parent=Cattle_Y_T00984;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00984;gene_id=Cattle_Y_G00648;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-2
haplotype2-0000357	CAT	exon	39633330	39633441	.	+	.	ID=Cattle_Y_E01610;Parent=Cattle_Y_T00984;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00984;gene_id=Cattle_Y_G00648;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-3
haplotype2-0000357	CAT	exon	39633583	39633728	.	+	.	ID=Cattle_Y_E01611;Parent=Cattle_Y_T00984;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00984;gene_id=Cattle_Y_G00648;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-4
haplotype2-0000357	CAT	exon	39633848	39633934	.	+	.	ID=Cattle_Y_E01612;Parent=Cattle_Y_T00984;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00984;gene_id=Cattle_Y_G00648;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-5
haplotype2-0000357	CAT	exon	39635193	39635412	.	+	.	ID=Cattle_Y_E01613;Parent=Cattle_Y_T00984;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00984;gene_id=Cattle_Y_G00648;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-6
haplotype2-0000357	CAT	CDS	39631989	39632516	.	+	0	ID=Cattle_Y_C01257;Parent=Cattle_Y_T00984;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_4;gene_id=Cattle_Y_G00648;transcript_id=Cattle_Y_T00984;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39633110	39633187	.	+	0	ID=Cattle_Y_C01258;Parent=Cattle_Y_T00984;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_4;gene_id=Cattle_Y_G00648;transcript_id=Cattle_Y_T00984;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39633330	39633441	.	+	0	ID=Cattle_Y_C01259;Parent=Cattle_Y_T00984;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_4;gene_id=Cattle_Y_G00648;transcript_id=Cattle_Y_T00984;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39633583	39633728	.	+	2	ID=Cattle_Y_C01260;Parent=Cattle_Y_T00984;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_4;gene_id=Cattle_Y_G00648;transcript_id=Cattle_Y_T00984;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39633848	39633934	.	+	0	ID=Cattle_Y_C01261;Parent=Cattle_Y_T00984;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_4;gene_id=Cattle_Y_G00648;transcript_id=Cattle_Y_T00984;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39635193	39635216	.	+	0	ID=Cattle_Y_C01262;Parent=Cattle_Y_T00984;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_4;gene_id=Cattle_Y_G00648;transcript_id=Cattle_Y_T00984;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	39631772	39635412	.	+	.	ID=Cattle_Y_T00985;Parent=Cattle_Y_G00648;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;Name=XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T00985;gene_id=Cattle_Y_G00648;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884145.1
haplotype2-0000357	CAT	exon	39631772	39632537	.	+	.	ID=Cattle_Y_E01614;Parent=Cattle_Y_T00985;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00985;gene_id=Cattle_Y_G00648;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-1
haplotype2-0000357	CAT	exon	39633330	39633441	.	+	.	ID=Cattle_Y_E01615;Parent=Cattle_Y_T00985;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00985;gene_id=Cattle_Y_G00648;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-2
haplotype2-0000357	CAT	exon	39633583	39633728	.	+	.	ID=Cattle_Y_E01616;Parent=Cattle_Y_T00985;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00985;gene_id=Cattle_Y_G00648;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-3
haplotype2-0000357	CAT	exon	39633848	39633934	.	+	.	ID=Cattle_Y_E01617;Parent=Cattle_Y_T00985;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00985;gene_id=Cattle_Y_G00648;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-4
haplotype2-0000357	CAT	exon	39635193	39635412	.	+	.	ID=Cattle_Y_E01618;Parent=Cattle_Y_T00985;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00985;gene_id=Cattle_Y_G00648;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-5
haplotype2-0000357	CAT	CDS	39631989	39632537	.	+	0	ID=Cattle_Y_C01263;Parent=Cattle_Y_T00985;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1_4;gene_id=Cattle_Y_G00648;transcript_id=Cattle_Y_T00985;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39633330	39633441	.	+	0	ID=Cattle_Y_C01264;Parent=Cattle_Y_T00985;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1_4;gene_id=Cattle_Y_G00648;transcript_id=Cattle_Y_T00985;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39633583	39633728	.	+	2	ID=Cattle_Y_C01265;Parent=Cattle_Y_T00985;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1_4;gene_id=Cattle_Y_G00648;transcript_id=Cattle_Y_T00985;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39633848	39633934	.	+	0	ID=Cattle_Y_C01266;Parent=Cattle_Y_T00985;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1_4;gene_id=Cattle_Y_G00648;transcript_id=Cattle_Y_T00985;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39635193	39635216	.	+	0	ID=Cattle_Y_C01267;Parent=Cattle_Y_T00985;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1_4;gene_id=Cattle_Y_G00648;transcript_id=Cattle_Y_T00985;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	39647472	39651112	.	+	.	ID=Cattle_Y_G00649;Dbxref=GeneID:132344512;Name=LOC132344512;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344512;gene_biotype=protein_coding;gene_id=Cattle_Y_G00649;source_id=gene-LOC132344512
haplotype2-0000357	CAT	mRNA	39647473	39651112	.	+	.	ID=Cattle_Y_T00986;Parent=Cattle_Y_G00649;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;Name=XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;model_evidence=Supporting evidence includes similarity to: 3 ESTs%2C 3 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T00986;gene_id=Cattle_Y_G00649;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884144.1
haplotype2-0000357	CAT	exon	39647473	39648216	.	+	.	ID=Cattle_Y_E01619;Parent=Cattle_Y_T00986;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00986;gene_id=Cattle_Y_G00649;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-1
haplotype2-0000357	CAT	exon	39648810	39648887	.	+	.	ID=Cattle_Y_E01620;Parent=Cattle_Y_T00986;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00986;gene_id=Cattle_Y_G00649;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-2
haplotype2-0000357	CAT	exon	39649030	39649141	.	+	.	ID=Cattle_Y_E01621;Parent=Cattle_Y_T00986;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00986;gene_id=Cattle_Y_G00649;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-3
haplotype2-0000357	CAT	exon	39649283	39649428	.	+	.	ID=Cattle_Y_E01622;Parent=Cattle_Y_T00986;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00986;gene_id=Cattle_Y_G00649;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-4
haplotype2-0000357	CAT	exon	39649548	39649634	.	+	.	ID=Cattle_Y_E01623;Parent=Cattle_Y_T00986;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00986;gene_id=Cattle_Y_G00649;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-5
haplotype2-0000357	CAT	exon	39650893	39651112	.	+	.	ID=Cattle_Y_E01624;Parent=Cattle_Y_T00986;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00986;gene_id=Cattle_Y_G00649;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-6
haplotype2-0000357	CAT	CDS	39647689	39648216	.	+	0	ID=Cattle_Y_C01268;Parent=Cattle_Y_T00986;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_2;gene_id=Cattle_Y_G00649;transcript_id=Cattle_Y_T00986;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39648810	39648887	.	+	0	ID=Cattle_Y_C01269;Parent=Cattle_Y_T00986;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_2;gene_id=Cattle_Y_G00649;transcript_id=Cattle_Y_T00986;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39649030	39649141	.	+	0	ID=Cattle_Y_C01270;Parent=Cattle_Y_T00986;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_2;gene_id=Cattle_Y_G00649;transcript_id=Cattle_Y_T00986;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39649283	39649428	.	+	2	ID=Cattle_Y_C01271;Parent=Cattle_Y_T00986;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_2;gene_id=Cattle_Y_G00649;transcript_id=Cattle_Y_T00986;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39649548	39649634	.	+	0	ID=Cattle_Y_C01272;Parent=Cattle_Y_T00986;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_2;gene_id=Cattle_Y_G00649;transcript_id=Cattle_Y_T00986;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39650893	39650916	.	+	0	ID=Cattle_Y_C01273;Parent=Cattle_Y_T00986;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_2;gene_id=Cattle_Y_G00649;transcript_id=Cattle_Y_T00986;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	39647472	39651112	.	+	.	ID=Cattle_Y_T00987;Parent=Cattle_Y_G00649;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;Name=XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T00987;gene_id=Cattle_Y_G00649;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884145.1
haplotype2-0000357	CAT	exon	39647472	39648237	.	+	.	ID=Cattle_Y_E01625;Parent=Cattle_Y_T00987;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00987;gene_id=Cattle_Y_G00649;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-1
haplotype2-0000357	CAT	exon	39649030	39649141	.	+	.	ID=Cattle_Y_E01626;Parent=Cattle_Y_T00987;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00987;gene_id=Cattle_Y_G00649;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-2
haplotype2-0000357	CAT	exon	39649283	39649428	.	+	.	ID=Cattle_Y_E01627;Parent=Cattle_Y_T00987;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00987;gene_id=Cattle_Y_G00649;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-3
haplotype2-0000357	CAT	exon	39649548	39649634	.	+	.	ID=Cattle_Y_E01628;Parent=Cattle_Y_T00987;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00987;gene_id=Cattle_Y_G00649;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-4
haplotype2-0000357	CAT	exon	39650893	39651112	.	+	.	ID=Cattle_Y_E01629;Parent=Cattle_Y_T00987;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00987;gene_id=Cattle_Y_G00649;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-5
haplotype2-0000357	CAT	CDS	39647689	39648237	.	+	0	ID=Cattle_Y_C01274;Parent=Cattle_Y_T00987;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1_2;gene_id=Cattle_Y_G00649;transcript_id=Cattle_Y_T00987;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39649030	39649141	.	+	0	ID=Cattle_Y_C01275;Parent=Cattle_Y_T00987;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1_2;gene_id=Cattle_Y_G00649;transcript_id=Cattle_Y_T00987;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39649283	39649428	.	+	2	ID=Cattle_Y_C01276;Parent=Cattle_Y_T00987;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1_2;gene_id=Cattle_Y_G00649;transcript_id=Cattle_Y_T00987;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39649548	39649634	.	+	0	ID=Cattle_Y_C01277;Parent=Cattle_Y_T00987;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1_2;gene_id=Cattle_Y_G00649;transcript_id=Cattle_Y_T00987;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39650893	39650916	.	+	0	ID=Cattle_Y_C01278;Parent=Cattle_Y_T00987;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1_2;gene_id=Cattle_Y_G00649;transcript_id=Cattle_Y_T00987;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	39668169	39671735	.	+	.	ID=Cattle_Y_G00650;Dbxref=GeneID:132344644;Name=LOC132344644;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344644;gene_biotype=protein_coding;gene_id=Cattle_Y_G00650;source_id=gene-LOC132344644
haplotype2-0000357	CAT	mRNA	39668169	39671735	.	+	.	ID=Cattle_Y_T00988;Parent=Cattle_Y_G00650;Dbxref=GeneID:132344644,GenBank:XM_059884296.1;Name=XM_059884296.1;gbkey=mRNA;gene=LOC132344644;model_evidence=Supporting evidence includes similarity to: 6 Proteins%2C and 9%25 coverage of the annotated genomic feature by RNAseq alignments;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00988;gene_id=Cattle_Y_G00650;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884296.1
haplotype2-0000357	CAT	exon	39668169	39668307	.	+	.	ID=Cattle_Y_E01630;Parent=Cattle_Y_T00988;Dbxref=GeneID:132344644,GenBank:XM_059884296.1;gbkey=mRNA;gene=LOC132344644;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00988;gene_id=Cattle_Y_G00650;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884296.1-1
haplotype2-0000357	CAT	exon	39668359	39668795	.	+	.	ID=Cattle_Y_E01631;Parent=Cattle_Y_T00988;Dbxref=GeneID:132344644,GenBank:XM_059884296.1;gbkey=mRNA;gene=LOC132344644;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00988;gene_id=Cattle_Y_G00650;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884296.1-1
haplotype2-0000357	CAT	exon	39670869	39670946	.	+	.	ID=Cattle_Y_E01632;Parent=Cattle_Y_T00988;Dbxref=GeneID:132344644,GenBank:XM_059884296.1;gbkey=mRNA;gene=LOC132344644;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00988;gene_id=Cattle_Y_G00650;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884296.1-1
haplotype2-0000357	CAT	exon	39671135	39671240	.	+	.	ID=Cattle_Y_E01633;Parent=Cattle_Y_T00988;Dbxref=GeneID:132344644,GenBank:XM_059884296.1;gbkey=mRNA;gene=LOC132344644;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00988;gene_id=Cattle_Y_G00650;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884296.1-1
haplotype2-0000357	CAT	exon	39671335	39671480	.	+	.	ID=Cattle_Y_E01634;Parent=Cattle_Y_T00988;Dbxref=GeneID:132344644,GenBank:XM_059884296.1;gbkey=mRNA;gene=LOC132344644;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00988;gene_id=Cattle_Y_G00650;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884296.1-1
haplotype2-0000357	CAT	exon	39671597	39671735	.	+	.	ID=Cattle_Y_E01635;Parent=Cattle_Y_T00988;Dbxref=GeneID:132344644,GenBank:XM_059884296.1;gbkey=mRNA;gene=LOC132344644;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T00988;gene_id=Cattle_Y_G00650;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884296.1-6
haplotype2-0000357	CAT	CDS	39668184	39668307	.	+	0	ID=Cattle_Y_C01279;Parent=Cattle_Y_T00988;gene_id=Cattle_Y_G00650;transcript_id=Cattle_Y_T00988;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39668359	39668795	.	+	2	ID=Cattle_Y_C01280;Parent=Cattle_Y_T00988;gene_id=Cattle_Y_G00650;transcript_id=Cattle_Y_T00988;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39670869	39670946	.	+	0	ID=Cattle_Y_C01281;Parent=Cattle_Y_T00988;gene_id=Cattle_Y_G00650;transcript_id=Cattle_Y_T00988;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39671135	39671240	.	+	0	ID=Cattle_Y_C01282;Parent=Cattle_Y_T00988;gene_id=Cattle_Y_G00650;transcript_id=Cattle_Y_T00988;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39671335	39671480	.	+	2	ID=Cattle_Y_C01283;Parent=Cattle_Y_T00988;gene_id=Cattle_Y_G00650;transcript_id=Cattle_Y_T00988;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39671597	39671674	.	+	0	ID=Cattle_Y_C01284;Parent=Cattle_Y_T00988;gene_id=Cattle_Y_G00650;transcript_id=Cattle_Y_T00988;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	39672693	39682127	.	-	.	ID=Cattle_Y_G00651;Dbxref=GeneID:132344450;Name=LOC132344450;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344450;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00651;source_id=gene-LOC132344450
haplotype2-0000357	CAT	exon	39672693	39672830	.	-	.	ID=Cattle_Y_T00989;Parent=Cattle_Y_G00651;Dbxref=GeneID:132344450;gbkey=exon;gene=LOC132344450;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 64%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00651;transcript_id=Cattle_Y_T00989;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344450
haplotype2-0000357	CAT	exon	39673882	39674045	.	-	.	ID=Cattle_Y_T00990;Parent=Cattle_Y_G00651;Dbxref=GeneID:132344450;gbkey=exon;gene=LOC132344450;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 64%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00651;transcript_id=Cattle_Y_T00990;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344450-2
haplotype2-0000357	CAT	exon	39681012	39682127	.	-	.	ID=Cattle_Y_T00991;Parent=Cattle_Y_G00651;Dbxref=GeneID:132344450;gbkey=exon;gene=LOC132344450;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 64%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00651;transcript_id=Cattle_Y_T00991;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344450-3
haplotype2-0000357	CAT	gene	39698657	39703902	.	+	.	ID=Cattle_Y_G00652;Dbxref=GeneID:132344502;Name=LOC132344502;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC132344502;gene_biotype=protein_coding;gene_id=Cattle_Y_G00652;source_id=gene-LOC132344502
haplotype2-0000357	CAT	mRNA	39698658	39703902	.	+	.	ID=Cattle_Y_T00992;Parent=Cattle_Y_G00652;Dbxref=GeneID:132344502,GenBank:XM_059884128.1;Name=XM_059884128.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344502;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 15 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X1;transcript_id=Cattle_Y_T00992;gene_id=Cattle_Y_G00652;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884128.1
haplotype2-0000357	CAT	exon	39698658	39698868	.	+	.	ID=Cattle_Y_E01636;Parent=Cattle_Y_T00992;Dbxref=GeneID:132344502,GenBank:XM_059884128.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344502;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00992;gene_id=Cattle_Y_G00652;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884128.1-1
haplotype2-0000357	CAT	exon	39699685	39699751	.	+	.	ID=Cattle_Y_E01637;Parent=Cattle_Y_T00992;Dbxref=GeneID:132344502,GenBank:XM_059884128.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344502;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00992;gene_id=Cattle_Y_G00652;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884128.1-2
haplotype2-0000357	CAT	exon	39701112	39701431	.	+	.	ID=Cattle_Y_E01638;Parent=Cattle_Y_T00992;Dbxref=GeneID:132344502,GenBank:XM_059884128.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344502;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00992;gene_id=Cattle_Y_G00652;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884128.1-3
haplotype2-0000357	CAT	exon	39701716	39702318	.	+	.	ID=Cattle_Y_E01639;Parent=Cattle_Y_T00992;Dbxref=GeneID:132344502,GenBank:XM_059884128.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344502;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00992;gene_id=Cattle_Y_G00652;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884128.1-4
haplotype2-0000357	CAT	exon	39703077	39703902	.	+	.	ID=Cattle_Y_E01640;Parent=Cattle_Y_T00992;Dbxref=GeneID:132344502,GenBank:XM_059884128.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344502;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T00992;gene_id=Cattle_Y_G00652;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884128.1-5
haplotype2-0000357	CAT	CDS	39699716	39699751	.	+	0	ID=Cattle_Y_C01285;Parent=Cattle_Y_T00992;Dbxref=GeneID:132344502,GenBank:XP_059740111.1;Name=XP_059740111.1;gbkey=CDS;gene=LOC132344502;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740111.1;gene_id=Cattle_Y_G00652;transcript_id=Cattle_Y_T00992;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39701112	39701431	.	+	0	ID=Cattle_Y_C01286;Parent=Cattle_Y_T00992;Dbxref=GeneID:132344502,GenBank:XP_059740111.1;Name=XP_059740111.1;gbkey=CDS;gene=LOC132344502;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740111.1;gene_id=Cattle_Y_G00652;transcript_id=Cattle_Y_T00992;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39701716	39702318	.	+	1	ID=Cattle_Y_C01287;Parent=Cattle_Y_T00992;Dbxref=GeneID:132344502,GenBank:XP_059740111.1;Name=XP_059740111.1;gbkey=CDS;gene=LOC132344502;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740111.1;gene_id=Cattle_Y_G00652;transcript_id=Cattle_Y_T00992;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39703077	39703653	.	+	1	ID=Cattle_Y_C01288;Parent=Cattle_Y_T00992;Dbxref=GeneID:132344502,GenBank:XP_059740111.1;Name=XP_059740111.1;gbkey=CDS;gene=LOC132344502;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740111.1;gene_id=Cattle_Y_G00652;transcript_id=Cattle_Y_T00992;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	39698657	39703902	.	+	.	ID=Cattle_Y_T00993;Parent=Cattle_Y_G00652;Dbxref=GeneID:132344502,GenBank:XM_059884129.1;Name=XM_059884129.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344502;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 13 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X2;transcript_id=Cattle_Y_T00993;gene_id=Cattle_Y_G00652;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884129.1
haplotype2-0000357	CAT	exon	39698657	39698868	.	+	.	ID=Cattle_Y_E01641;Parent=Cattle_Y_T00993;Dbxref=GeneID:132344502,GenBank:XM_059884129.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344502;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00993;gene_id=Cattle_Y_G00652;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884129.1-1
haplotype2-0000357	CAT	exon	39701112	39701431	.	+	.	ID=Cattle_Y_E01642;Parent=Cattle_Y_T00993;Dbxref=GeneID:132344502,GenBank:XM_059884129.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344502;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00993;gene_id=Cattle_Y_G00652;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884129.1-2
haplotype2-0000357	CAT	exon	39701716	39702318	.	+	.	ID=Cattle_Y_E01643;Parent=Cattle_Y_T00993;Dbxref=GeneID:132344502,GenBank:XM_059884129.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344502;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00993;gene_id=Cattle_Y_G00652;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884129.1-3
haplotype2-0000357	CAT	exon	39703077	39703902	.	+	.	ID=Cattle_Y_E01644;Parent=Cattle_Y_T00993;Dbxref=GeneID:132344502,GenBank:XM_059884129.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344502;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T00993;gene_id=Cattle_Y_G00652;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884129.1-4
haplotype2-0000357	CAT	CDS	39701139	39701431	.	+	0	ID=Cattle_Y_C01289;Parent=Cattle_Y_T00993;Dbxref=GeneID:132344502,GenBank:XP_059740112.1;Name=XP_059740112.1;gbkey=CDS;gene=LOC132344502;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740112.1;gene_id=Cattle_Y_G00652;transcript_id=Cattle_Y_T00993;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39701716	39702318	.	+	1	ID=Cattle_Y_C01290;Parent=Cattle_Y_T00993;Dbxref=GeneID:132344502,GenBank:XP_059740112.1;Name=XP_059740112.1;gbkey=CDS;gene=LOC132344502;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740112.1;gene_id=Cattle_Y_G00652;transcript_id=Cattle_Y_T00993;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	39703077	39703653	.	+	1	ID=Cattle_Y_C01291;Parent=Cattle_Y_T00993;Dbxref=GeneID:132344502,GenBank:XP_059740112.1;Name=XP_059740112.1;gbkey=CDS;gene=LOC132344502;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740112.1;gene_id=Cattle_Y_G00652;transcript_id=Cattle_Y_T00993;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	40202951	40206591	.	+	.	ID=Cattle_Y_G00653;Dbxref=GeneID:132344512;Name=LOC132344512;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344512;gene_biotype=protein_coding;gene_id=Cattle_Y_G00653;source_id=gene-LOC132344512
haplotype2-0000357	CAT	mRNA	40202952	40206591	.	+	.	ID=Cattle_Y_T00994;Parent=Cattle_Y_G00653;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;Name=XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;model_evidence=Supporting evidence includes similarity to: 3 ESTs%2C 3 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T00994;gene_id=Cattle_Y_G00653;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884144.1
haplotype2-0000357	CAT	exon	40202952	40203695	.	+	.	ID=Cattle_Y_E01645;Parent=Cattle_Y_T00994;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00994;gene_id=Cattle_Y_G00653;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-1
haplotype2-0000357	CAT	exon	40204289	40204366	.	+	.	ID=Cattle_Y_E01646;Parent=Cattle_Y_T00994;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00994;gene_id=Cattle_Y_G00653;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-2
haplotype2-0000357	CAT	exon	40204509	40204620	.	+	.	ID=Cattle_Y_E01647;Parent=Cattle_Y_T00994;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00994;gene_id=Cattle_Y_G00653;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-3
haplotype2-0000357	CAT	exon	40204762	40204907	.	+	.	ID=Cattle_Y_E01648;Parent=Cattle_Y_T00994;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00994;gene_id=Cattle_Y_G00653;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-4
haplotype2-0000357	CAT	exon	40205027	40205113	.	+	.	ID=Cattle_Y_E01649;Parent=Cattle_Y_T00994;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00994;gene_id=Cattle_Y_G00653;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-5
haplotype2-0000357	CAT	exon	40206372	40206591	.	+	.	ID=Cattle_Y_E01650;Parent=Cattle_Y_T00994;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00994;gene_id=Cattle_Y_G00653;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-6
haplotype2-0000357	CAT	CDS	40203168	40203695	.	+	0	ID=Cattle_Y_C01292;Parent=Cattle_Y_T00994;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_1;gene_id=Cattle_Y_G00653;transcript_id=Cattle_Y_T00994;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40204289	40204366	.	+	0	ID=Cattle_Y_C01293;Parent=Cattle_Y_T00994;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_1;gene_id=Cattle_Y_G00653;transcript_id=Cattle_Y_T00994;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40204509	40204620	.	+	0	ID=Cattle_Y_C01294;Parent=Cattle_Y_T00994;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_1;gene_id=Cattle_Y_G00653;transcript_id=Cattle_Y_T00994;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40204762	40204907	.	+	2	ID=Cattle_Y_C01295;Parent=Cattle_Y_T00994;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_1;gene_id=Cattle_Y_G00653;transcript_id=Cattle_Y_T00994;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40205027	40205113	.	+	0	ID=Cattle_Y_C01296;Parent=Cattle_Y_T00994;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_1;gene_id=Cattle_Y_G00653;transcript_id=Cattle_Y_T00994;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40206372	40206395	.	+	0	ID=Cattle_Y_C01297;Parent=Cattle_Y_T00994;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1_1;gene_id=Cattle_Y_G00653;transcript_id=Cattle_Y_T00994;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	40202951	40206591	.	+	.	ID=Cattle_Y_T00995;Parent=Cattle_Y_G00653;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;Name=XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T00995;gene_id=Cattle_Y_G00653;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884145.1
haplotype2-0000357	CAT	exon	40202951	40203716	.	+	.	ID=Cattle_Y_E01651;Parent=Cattle_Y_T00995;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00995;gene_id=Cattle_Y_G00653;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-1
haplotype2-0000357	CAT	exon	40204509	40204620	.	+	.	ID=Cattle_Y_E01652;Parent=Cattle_Y_T00995;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00995;gene_id=Cattle_Y_G00653;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-2
haplotype2-0000357	CAT	exon	40204762	40204907	.	+	.	ID=Cattle_Y_E01653;Parent=Cattle_Y_T00995;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00995;gene_id=Cattle_Y_G00653;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-3
haplotype2-0000357	CAT	exon	40205027	40205113	.	+	.	ID=Cattle_Y_E01654;Parent=Cattle_Y_T00995;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00995;gene_id=Cattle_Y_G00653;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-4
haplotype2-0000357	CAT	exon	40206372	40206591	.	+	.	ID=Cattle_Y_E01655;Parent=Cattle_Y_T00995;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00995;gene_id=Cattle_Y_G00653;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-5
haplotype2-0000357	CAT	CDS	40203168	40203716	.	+	0	ID=Cattle_Y_C01298;Parent=Cattle_Y_T00995;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1_1;gene_id=Cattle_Y_G00653;transcript_id=Cattle_Y_T00995;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40204509	40204620	.	+	0	ID=Cattle_Y_C01299;Parent=Cattle_Y_T00995;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1_1;gene_id=Cattle_Y_G00653;transcript_id=Cattle_Y_T00995;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40204762	40204907	.	+	2	ID=Cattle_Y_C01300;Parent=Cattle_Y_T00995;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1_1;gene_id=Cattle_Y_G00653;transcript_id=Cattle_Y_T00995;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40205027	40205113	.	+	0	ID=Cattle_Y_C01301;Parent=Cattle_Y_T00995;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1_1;gene_id=Cattle_Y_G00653;transcript_id=Cattle_Y_T00995;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40206372	40206395	.	+	0	ID=Cattle_Y_C01302;Parent=Cattle_Y_T00995;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1_1;gene_id=Cattle_Y_G00653;transcript_id=Cattle_Y_T00995;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	40218642	40222291	.	+	.	ID=Cattle_Y_G00654;Dbxref=GeneID:132344471;Name=LOC132344471;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344471;gene_biotype=protein_coding;gene_id=Cattle_Y_G00654;source_id=gene-LOC132344471
haplotype2-0000357	CAT	mRNA	40218643	40222291	.	+	.	ID=Cattle_Y_T00996;Parent=Cattle_Y_G00654;Dbxref=GeneID:132344471,GenBank:XM_059884069.1;Name=XM_059884069.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344471;model_evidence=Supporting evidence includes similarity to: 1 mRNA%2C 1 EST%2C 5 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T00996;gene_id=Cattle_Y_G00654;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884069.1
haplotype2-0000357	CAT	exon	40218643	40219395	.	+	.	ID=Cattle_Y_E01656;Parent=Cattle_Y_T00996;Dbxref=GeneID:132344471,GenBank:XM_059884069.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344471;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00996;gene_id=Cattle_Y_G00654;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884069.1-1
haplotype2-0000357	CAT	exon	40219989	40220066	.	+	.	ID=Cattle_Y_E01657;Parent=Cattle_Y_T00996;Dbxref=GeneID:132344471,GenBank:XM_059884069.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344471;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00996;gene_id=Cattle_Y_G00654;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884069.1-2
haplotype2-0000357	CAT	exon	40220209	40220320	.	+	.	ID=Cattle_Y_E01658;Parent=Cattle_Y_T00996;Dbxref=GeneID:132344471,GenBank:XM_059884069.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344471;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00996;gene_id=Cattle_Y_G00654;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884069.1-3
haplotype2-0000357	CAT	exon	40220462	40220607	.	+	.	ID=Cattle_Y_E01659;Parent=Cattle_Y_T00996;Dbxref=GeneID:132344471,GenBank:XM_059884069.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344471;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00996;gene_id=Cattle_Y_G00654;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884069.1-4
haplotype2-0000357	CAT	exon	40220727	40220813	.	+	.	ID=Cattle_Y_E01660;Parent=Cattle_Y_T00996;Dbxref=GeneID:132344471,GenBank:XM_059884069.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344471;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00996;gene_id=Cattle_Y_G00654;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884069.1-5
haplotype2-0000357	CAT	exon	40222072	40222291	.	+	.	ID=Cattle_Y_E01661;Parent=Cattle_Y_T00996;Dbxref=GeneID:132344471,GenBank:XM_059884069.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344471;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00996;gene_id=Cattle_Y_G00654;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884069.1-6
haplotype2-0000357	CAT	CDS	40218868	40219395	.	+	0	ID=Cattle_Y_C01303;Parent=Cattle_Y_T00996;Dbxref=GeneID:132344471,GenBank:XP_059740052.1;Name=XP_059740052.1;gbkey=CDS;gene=LOC132344471;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740052.1;gene_id=Cattle_Y_G00654;transcript_id=Cattle_Y_T00996;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40219989	40220066	.	+	0	ID=Cattle_Y_C01304;Parent=Cattle_Y_T00996;Dbxref=GeneID:132344471,GenBank:XP_059740052.1;Name=XP_059740052.1;gbkey=CDS;gene=LOC132344471;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740052.1;gene_id=Cattle_Y_G00654;transcript_id=Cattle_Y_T00996;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40220209	40220320	.	+	0	ID=Cattle_Y_C01305;Parent=Cattle_Y_T00996;Dbxref=GeneID:132344471,GenBank:XP_059740052.1;Name=XP_059740052.1;gbkey=CDS;gene=LOC132344471;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740052.1;gene_id=Cattle_Y_G00654;transcript_id=Cattle_Y_T00996;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40220462	40220607	.	+	2	ID=Cattle_Y_C01306;Parent=Cattle_Y_T00996;Dbxref=GeneID:132344471,GenBank:XP_059740052.1;Name=XP_059740052.1;gbkey=CDS;gene=LOC132344471;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740052.1;gene_id=Cattle_Y_G00654;transcript_id=Cattle_Y_T00996;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40220727	40220813	.	+	0	ID=Cattle_Y_C01307;Parent=Cattle_Y_T00996;Dbxref=GeneID:132344471,GenBank:XP_059740052.1;Name=XP_059740052.1;gbkey=CDS;gene=LOC132344471;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740052.1;gene_id=Cattle_Y_G00654;transcript_id=Cattle_Y_T00996;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40222072	40222095	.	+	0	ID=Cattle_Y_C01308;Parent=Cattle_Y_T00996;Dbxref=GeneID:132344471,GenBank:XP_059740052.1;Name=XP_059740052.1;gbkey=CDS;gene=LOC132344471;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740052.1;gene_id=Cattle_Y_G00654;transcript_id=Cattle_Y_T00996;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	40218642	40222291	.	+	.	ID=Cattle_Y_T00997;Parent=Cattle_Y_G00654;Dbxref=GeneID:132344471,GenBank:XM_059884070.1;Name=XM_059884070.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344471;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T00997;gene_id=Cattle_Y_G00654;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884070.1
haplotype2-0000357	CAT	exon	40218642	40219416	.	+	.	ID=Cattle_Y_E01662;Parent=Cattle_Y_T00997;Dbxref=GeneID:132344471,GenBank:XM_059884070.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344471;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00997;gene_id=Cattle_Y_G00654;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884070.1-1
haplotype2-0000357	CAT	exon	40220209	40220320	.	+	.	ID=Cattle_Y_E01663;Parent=Cattle_Y_T00997;Dbxref=GeneID:132344471,GenBank:XM_059884070.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344471;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00997;gene_id=Cattle_Y_G00654;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884070.1-2
haplotype2-0000357	CAT	exon	40220462	40220607	.	+	.	ID=Cattle_Y_E01664;Parent=Cattle_Y_T00997;Dbxref=GeneID:132344471,GenBank:XM_059884070.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344471;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00997;gene_id=Cattle_Y_G00654;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884070.1-3
haplotype2-0000357	CAT	exon	40220727	40220813	.	+	.	ID=Cattle_Y_E01665;Parent=Cattle_Y_T00997;Dbxref=GeneID:132344471,GenBank:XM_059884070.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344471;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00997;gene_id=Cattle_Y_G00654;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884070.1-4
haplotype2-0000357	CAT	exon	40222072	40222291	.	+	.	ID=Cattle_Y_E01666;Parent=Cattle_Y_T00997;Dbxref=GeneID:132344471,GenBank:XM_059884070.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344471;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00997;gene_id=Cattle_Y_G00654;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884070.1-5
haplotype2-0000357	CAT	CDS	40218868	40219416	.	+	0	ID=Cattle_Y_C01309;Parent=Cattle_Y_T00997;Dbxref=GeneID:132344471,GenBank:XP_059740053.1;Name=XP_059740053.1;gbkey=CDS;gene=LOC132344471;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740053.1;gene_id=Cattle_Y_G00654;transcript_id=Cattle_Y_T00997;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40220209	40220320	.	+	0	ID=Cattle_Y_C01310;Parent=Cattle_Y_T00997;Dbxref=GeneID:132344471,GenBank:XP_059740053.1;Name=XP_059740053.1;gbkey=CDS;gene=LOC132344471;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740053.1;gene_id=Cattle_Y_G00654;transcript_id=Cattle_Y_T00997;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40220462	40220607	.	+	2	ID=Cattle_Y_C01311;Parent=Cattle_Y_T00997;Dbxref=GeneID:132344471,GenBank:XP_059740053.1;Name=XP_059740053.1;gbkey=CDS;gene=LOC132344471;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740053.1;gene_id=Cattle_Y_G00654;transcript_id=Cattle_Y_T00997;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40220727	40220813	.	+	0	ID=Cattle_Y_C01312;Parent=Cattle_Y_T00997;Dbxref=GeneID:132344471,GenBank:XP_059740053.1;Name=XP_059740053.1;gbkey=CDS;gene=LOC132344471;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740053.1;gene_id=Cattle_Y_G00654;transcript_id=Cattle_Y_T00997;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40222072	40222095	.	+	0	ID=Cattle_Y_C01313;Parent=Cattle_Y_T00997;Dbxref=GeneID:132344471,GenBank:XP_059740053.1;Name=XP_059740053.1;gbkey=CDS;gene=LOC132344471;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740053.1;gene_id=Cattle_Y_G00654;transcript_id=Cattle_Y_T00997;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	40234342	40237991	.	+	.	ID=Cattle_Y_G00655;Dbxref=GeneID:132344477;Name=LOC132344477;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344477;gene_biotype=protein_coding;gene_id=Cattle_Y_G00655;source_id=gene-LOC132344477
haplotype2-0000357	CAT	mRNA	40234343	40237991	.	+	.	ID=Cattle_Y_T00998;Parent=Cattle_Y_G00655;Dbxref=GeneID:132344477,GenBank:XM_059884081.1;Name=XM_059884081.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344477;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 4 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T00998;gene_id=Cattle_Y_G00655;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884081.1
haplotype2-0000357	CAT	exon	40234343	40235095	.	+	.	ID=Cattle_Y_E01667;Parent=Cattle_Y_T00998;Dbxref=GeneID:132344477,GenBank:XM_059884081.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344477;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00998;gene_id=Cattle_Y_G00655;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884081.1-1
haplotype2-0000357	CAT	exon	40235689	40235766	.	+	.	ID=Cattle_Y_E01668;Parent=Cattle_Y_T00998;Dbxref=GeneID:132344477,GenBank:XM_059884081.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344477;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00998;gene_id=Cattle_Y_G00655;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884081.1-2
haplotype2-0000357	CAT	exon	40235909	40236020	.	+	.	ID=Cattle_Y_E01669;Parent=Cattle_Y_T00998;Dbxref=GeneID:132344477,GenBank:XM_059884081.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344477;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00998;gene_id=Cattle_Y_G00655;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884081.1-3
haplotype2-0000357	CAT	exon	40236162	40236307	.	+	.	ID=Cattle_Y_E01670;Parent=Cattle_Y_T00998;Dbxref=GeneID:132344477,GenBank:XM_059884081.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344477;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00998;gene_id=Cattle_Y_G00655;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884081.1-4
haplotype2-0000357	CAT	exon	40236427	40236513	.	+	.	ID=Cattle_Y_E01671;Parent=Cattle_Y_T00998;Dbxref=GeneID:132344477,GenBank:XM_059884081.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344477;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00998;gene_id=Cattle_Y_G00655;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884081.1-5
haplotype2-0000357	CAT	exon	40237772	40237991	.	+	.	ID=Cattle_Y_E01672;Parent=Cattle_Y_T00998;Dbxref=GeneID:132344477,GenBank:XM_059884081.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344477;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T00998;gene_id=Cattle_Y_G00655;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884081.1-6
haplotype2-0000357	CAT	CDS	40234568	40235095	.	+	0	ID=Cattle_Y_C01314;Parent=Cattle_Y_T00998;Dbxref=GeneID:132344477,GenBank:XP_059740064.1;Name=XP_059740064.1;gbkey=CDS;gene=LOC132344477;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740064.1;gene_id=Cattle_Y_G00655;transcript_id=Cattle_Y_T00998;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40235689	40235766	.	+	0	ID=Cattle_Y_C01315;Parent=Cattle_Y_T00998;Dbxref=GeneID:132344477,GenBank:XP_059740064.1;Name=XP_059740064.1;gbkey=CDS;gene=LOC132344477;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740064.1;gene_id=Cattle_Y_G00655;transcript_id=Cattle_Y_T00998;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40235909	40236020	.	+	0	ID=Cattle_Y_C01316;Parent=Cattle_Y_T00998;Dbxref=GeneID:132344477,GenBank:XP_059740064.1;Name=XP_059740064.1;gbkey=CDS;gene=LOC132344477;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740064.1;gene_id=Cattle_Y_G00655;transcript_id=Cattle_Y_T00998;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40236162	40236307	.	+	2	ID=Cattle_Y_C01317;Parent=Cattle_Y_T00998;Dbxref=GeneID:132344477,GenBank:XP_059740064.1;Name=XP_059740064.1;gbkey=CDS;gene=LOC132344477;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740064.1;gene_id=Cattle_Y_G00655;transcript_id=Cattle_Y_T00998;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40236427	40236513	.	+	0	ID=Cattle_Y_C01318;Parent=Cattle_Y_T00998;Dbxref=GeneID:132344477,GenBank:XP_059740064.1;Name=XP_059740064.1;gbkey=CDS;gene=LOC132344477;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740064.1;gene_id=Cattle_Y_G00655;transcript_id=Cattle_Y_T00998;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40237772	40237795	.	+	0	ID=Cattle_Y_C01319;Parent=Cattle_Y_T00998;Dbxref=GeneID:132344477,GenBank:XP_059740064.1;Name=XP_059740064.1;gbkey=CDS;gene=LOC132344477;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740064.1;gene_id=Cattle_Y_G00655;transcript_id=Cattle_Y_T00998;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	40234342	40237991	.	+	.	ID=Cattle_Y_T00999;Parent=Cattle_Y_G00655;Dbxref=GeneID:132344477,GenBank:XM_059884082.1;Name=XM_059884082.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344477;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T00999;gene_id=Cattle_Y_G00655;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884082.1
haplotype2-0000357	CAT	exon	40234342	40235116	.	+	.	ID=Cattle_Y_E01673;Parent=Cattle_Y_T00999;Dbxref=GeneID:132344477,GenBank:XM_059884082.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344477;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00999;gene_id=Cattle_Y_G00655;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884082.1-1
haplotype2-0000357	CAT	exon	40235909	40236020	.	+	.	ID=Cattle_Y_E01674;Parent=Cattle_Y_T00999;Dbxref=GeneID:132344477,GenBank:XM_059884082.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344477;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00999;gene_id=Cattle_Y_G00655;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884082.1-2
haplotype2-0000357	CAT	exon	40236162	40236307	.	+	.	ID=Cattle_Y_E01675;Parent=Cattle_Y_T00999;Dbxref=GeneID:132344477,GenBank:XM_059884082.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344477;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00999;gene_id=Cattle_Y_G00655;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884082.1-3
haplotype2-0000357	CAT	exon	40236427	40236513	.	+	.	ID=Cattle_Y_E01676;Parent=Cattle_Y_T00999;Dbxref=GeneID:132344477,GenBank:XM_059884082.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344477;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00999;gene_id=Cattle_Y_G00655;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884082.1-4
haplotype2-0000357	CAT	exon	40237772	40237991	.	+	.	ID=Cattle_Y_E01677;Parent=Cattle_Y_T00999;Dbxref=GeneID:132344477,GenBank:XM_059884082.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344477;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T00999;gene_id=Cattle_Y_G00655;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884082.1-5
haplotype2-0000357	CAT	CDS	40234568	40235116	.	+	0	ID=Cattle_Y_C01320;Parent=Cattle_Y_T00999;Dbxref=GeneID:132344477,GenBank:XP_059740065.1;Name=XP_059740065.1;gbkey=CDS;gene=LOC132344477;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740065.1;gene_id=Cattle_Y_G00655;transcript_id=Cattle_Y_T00999;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40235909	40236020	.	+	0	ID=Cattle_Y_C01321;Parent=Cattle_Y_T00999;Dbxref=GeneID:132344477,GenBank:XP_059740065.1;Name=XP_059740065.1;gbkey=CDS;gene=LOC132344477;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740065.1;gene_id=Cattle_Y_G00655;transcript_id=Cattle_Y_T00999;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40236162	40236307	.	+	2	ID=Cattle_Y_C01322;Parent=Cattle_Y_T00999;Dbxref=GeneID:132344477,GenBank:XP_059740065.1;Name=XP_059740065.1;gbkey=CDS;gene=LOC132344477;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740065.1;gene_id=Cattle_Y_G00655;transcript_id=Cattle_Y_T00999;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40236427	40236513	.	+	0	ID=Cattle_Y_C01323;Parent=Cattle_Y_T00999;Dbxref=GeneID:132344477,GenBank:XP_059740065.1;Name=XP_059740065.1;gbkey=CDS;gene=LOC132344477;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740065.1;gene_id=Cattle_Y_G00655;transcript_id=Cattle_Y_T00999;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40237772	40237795	.	+	0	ID=Cattle_Y_C01324;Parent=Cattle_Y_T00999;Dbxref=GeneID:132344477,GenBank:XP_059740065.1;Name=XP_059740065.1;gbkey=CDS;gene=LOC132344477;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740065.1;gene_id=Cattle_Y_G00655;transcript_id=Cattle_Y_T00999;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	40250041	40253690	.	+	.	ID=Cattle_Y_G00656;Dbxref=GeneID:132344475;Name=LOC132344475;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344475;gene_biotype=protein_coding;gene_id=Cattle_Y_G00656;source_id=gene-LOC132344475
haplotype2-0000357	CAT	mRNA	40250042	40253690	.	+	.	ID=Cattle_Y_T01000;Parent=Cattle_Y_G00656;Dbxref=GeneID:132344475,GenBank:XM_059884077.1;Name=XM_059884077.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344475;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 5 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T01000;gene_id=Cattle_Y_G00656;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884077.1
haplotype2-0000357	CAT	exon	40250042	40250794	.	+	.	ID=Cattle_Y_E01678;Parent=Cattle_Y_T01000;Dbxref=GeneID:132344475,GenBank:XM_059884077.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344475;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01000;gene_id=Cattle_Y_G00656;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884077.1-1
haplotype2-0000357	CAT	exon	40251388	40251465	.	+	.	ID=Cattle_Y_E01679;Parent=Cattle_Y_T01000;Dbxref=GeneID:132344475,GenBank:XM_059884077.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344475;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01000;gene_id=Cattle_Y_G00656;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884077.1-2
haplotype2-0000357	CAT	exon	40251608	40251719	.	+	.	ID=Cattle_Y_E01680;Parent=Cattle_Y_T01000;Dbxref=GeneID:132344475,GenBank:XM_059884077.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344475;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01000;gene_id=Cattle_Y_G00656;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884077.1-3
haplotype2-0000357	CAT	exon	40251861	40252006	.	+	.	ID=Cattle_Y_E01681;Parent=Cattle_Y_T01000;Dbxref=GeneID:132344475,GenBank:XM_059884077.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344475;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01000;gene_id=Cattle_Y_G00656;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884077.1-4
haplotype2-0000357	CAT	exon	40252126	40252212	.	+	.	ID=Cattle_Y_E01682;Parent=Cattle_Y_T01000;Dbxref=GeneID:132344475,GenBank:XM_059884077.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344475;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01000;gene_id=Cattle_Y_G00656;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884077.1-5
haplotype2-0000357	CAT	exon	40253471	40253690	.	+	.	ID=Cattle_Y_E01683;Parent=Cattle_Y_T01000;Dbxref=GeneID:132344475,GenBank:XM_059884077.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344475;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01000;gene_id=Cattle_Y_G00656;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884077.1-6
haplotype2-0000357	CAT	CDS	40250267	40250794	.	+	0	ID=Cattle_Y_C01325;Parent=Cattle_Y_T01000;Dbxref=GeneID:132344475,GenBank:XP_059740060.1;Name=XP_059740060.1;gbkey=CDS;gene=LOC132344475;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740060.1;gene_id=Cattle_Y_G00656;transcript_id=Cattle_Y_T01000;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40251388	40251465	.	+	0	ID=Cattle_Y_C01326;Parent=Cattle_Y_T01000;Dbxref=GeneID:132344475,GenBank:XP_059740060.1;Name=XP_059740060.1;gbkey=CDS;gene=LOC132344475;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740060.1;gene_id=Cattle_Y_G00656;transcript_id=Cattle_Y_T01000;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40251608	40251719	.	+	0	ID=Cattle_Y_C01327;Parent=Cattle_Y_T01000;Dbxref=GeneID:132344475,GenBank:XP_059740060.1;Name=XP_059740060.1;gbkey=CDS;gene=LOC132344475;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740060.1;gene_id=Cattle_Y_G00656;transcript_id=Cattle_Y_T01000;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40251861	40252006	.	+	2	ID=Cattle_Y_C01328;Parent=Cattle_Y_T01000;Dbxref=GeneID:132344475,GenBank:XP_059740060.1;Name=XP_059740060.1;gbkey=CDS;gene=LOC132344475;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740060.1;gene_id=Cattle_Y_G00656;transcript_id=Cattle_Y_T01000;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40252126	40252212	.	+	0	ID=Cattle_Y_C01329;Parent=Cattle_Y_T01000;Dbxref=GeneID:132344475,GenBank:XP_059740060.1;Name=XP_059740060.1;gbkey=CDS;gene=LOC132344475;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740060.1;gene_id=Cattle_Y_G00656;transcript_id=Cattle_Y_T01000;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40253471	40253494	.	+	0	ID=Cattle_Y_C01330;Parent=Cattle_Y_T01000;Dbxref=GeneID:132344475,GenBank:XP_059740060.1;Name=XP_059740060.1;gbkey=CDS;gene=LOC132344475;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740060.1;gene_id=Cattle_Y_G00656;transcript_id=Cattle_Y_T01000;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	40250041	40253690	.	+	.	ID=Cattle_Y_T01001;Parent=Cattle_Y_G00656;Dbxref=GeneID:132344475,GenBank:XM_059884078.1;Name=XM_059884078.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344475;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T01001;gene_id=Cattle_Y_G00656;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884078.1
haplotype2-0000357	CAT	exon	40250041	40250815	.	+	.	ID=Cattle_Y_E01684;Parent=Cattle_Y_T01001;Dbxref=GeneID:132344475,GenBank:XM_059884078.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344475;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01001;gene_id=Cattle_Y_G00656;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884078.1-1
haplotype2-0000357	CAT	exon	40251608	40251719	.	+	.	ID=Cattle_Y_E01685;Parent=Cattle_Y_T01001;Dbxref=GeneID:132344475,GenBank:XM_059884078.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344475;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01001;gene_id=Cattle_Y_G00656;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884078.1-2
haplotype2-0000357	CAT	exon	40251861	40252006	.	+	.	ID=Cattle_Y_E01686;Parent=Cattle_Y_T01001;Dbxref=GeneID:132344475,GenBank:XM_059884078.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344475;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01001;gene_id=Cattle_Y_G00656;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884078.1-3
haplotype2-0000357	CAT	exon	40252126	40252212	.	+	.	ID=Cattle_Y_E01687;Parent=Cattle_Y_T01001;Dbxref=GeneID:132344475,GenBank:XM_059884078.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344475;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01001;gene_id=Cattle_Y_G00656;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884078.1-4
haplotype2-0000357	CAT	exon	40253471	40253690	.	+	.	ID=Cattle_Y_E01688;Parent=Cattle_Y_T01001;Dbxref=GeneID:132344475,GenBank:XM_059884078.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344475;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01001;gene_id=Cattle_Y_G00656;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884078.1-5
haplotype2-0000357	CAT	CDS	40250267	40250815	.	+	0	ID=Cattle_Y_C01331;Parent=Cattle_Y_T01001;Dbxref=GeneID:132344475,GenBank:XP_059740061.1;Name=XP_059740061.1;gbkey=CDS;gene=LOC132344475;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740061.1;gene_id=Cattle_Y_G00656;transcript_id=Cattle_Y_T01001;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40251608	40251719	.	+	0	ID=Cattle_Y_C01332;Parent=Cattle_Y_T01001;Dbxref=GeneID:132344475,GenBank:XP_059740061.1;Name=XP_059740061.1;gbkey=CDS;gene=LOC132344475;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740061.1;gene_id=Cattle_Y_G00656;transcript_id=Cattle_Y_T01001;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40251861	40252006	.	+	2	ID=Cattle_Y_C01333;Parent=Cattle_Y_T01001;Dbxref=GeneID:132344475,GenBank:XP_059740061.1;Name=XP_059740061.1;gbkey=CDS;gene=LOC132344475;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740061.1;gene_id=Cattle_Y_G00656;transcript_id=Cattle_Y_T01001;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40252126	40252212	.	+	0	ID=Cattle_Y_C01334;Parent=Cattle_Y_T01001;Dbxref=GeneID:132344475,GenBank:XP_059740061.1;Name=XP_059740061.1;gbkey=CDS;gene=LOC132344475;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740061.1;gene_id=Cattle_Y_G00656;transcript_id=Cattle_Y_T01001;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40253471	40253494	.	+	0	ID=Cattle_Y_C01335;Parent=Cattle_Y_T01001;Dbxref=GeneID:132344475,GenBank:XP_059740061.1;Name=XP_059740061.1;gbkey=CDS;gene=LOC132344475;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740061.1;gene_id=Cattle_Y_G00656;transcript_id=Cattle_Y_T01001;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	40265741	40269390	.	+	.	ID=Cattle_Y_G00657;Dbxref=GeneID:132344472;Name=LOC132344472;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344472;gene_biotype=protein_coding;gene_id=Cattle_Y_G00657;source_id=gene-LOC132344472
haplotype2-0000357	CAT	mRNA	40265742	40269390	.	+	.	ID=Cattle_Y_T01002;Parent=Cattle_Y_G00657;Dbxref=GeneID:132344472,GenBank:XM_059884071.1;Name=XM_059884071.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344472;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 5 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T01002;gene_id=Cattle_Y_G00657;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884071.1
haplotype2-0000357	CAT	exon	40265742	40266494	.	+	.	ID=Cattle_Y_E01689;Parent=Cattle_Y_T01002;Dbxref=GeneID:132344472,GenBank:XM_059884071.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344472;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01002;gene_id=Cattle_Y_G00657;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884071.1-1
haplotype2-0000357	CAT	exon	40267088	40267165	.	+	.	ID=Cattle_Y_E01690;Parent=Cattle_Y_T01002;Dbxref=GeneID:132344472,GenBank:XM_059884071.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344472;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01002;gene_id=Cattle_Y_G00657;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884071.1-2
haplotype2-0000357	CAT	exon	40267308	40267419	.	+	.	ID=Cattle_Y_E01691;Parent=Cattle_Y_T01002;Dbxref=GeneID:132344472,GenBank:XM_059884071.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344472;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01002;gene_id=Cattle_Y_G00657;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884071.1-3
haplotype2-0000357	CAT	exon	40267561	40267706	.	+	.	ID=Cattle_Y_E01692;Parent=Cattle_Y_T01002;Dbxref=GeneID:132344472,GenBank:XM_059884071.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344472;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01002;gene_id=Cattle_Y_G00657;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884071.1-4
haplotype2-0000357	CAT	exon	40267826	40267912	.	+	.	ID=Cattle_Y_E01693;Parent=Cattle_Y_T01002;Dbxref=GeneID:132344472,GenBank:XM_059884071.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344472;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01002;gene_id=Cattle_Y_G00657;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884071.1-5
haplotype2-0000357	CAT	exon	40269171	40269390	.	+	.	ID=Cattle_Y_E01694;Parent=Cattle_Y_T01002;Dbxref=GeneID:132344472,GenBank:XM_059884071.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344472;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01002;gene_id=Cattle_Y_G00657;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884071.1-6
haplotype2-0000357	CAT	CDS	40265967	40266494	.	+	0	ID=Cattle_Y_C01336;Parent=Cattle_Y_T01002;Dbxref=GeneID:132344472,GenBank:XP_059740054.1;Name=XP_059740054.1;gbkey=CDS;gene=LOC132344472;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740054.1;gene_id=Cattle_Y_G00657;transcript_id=Cattle_Y_T01002;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40267088	40267165	.	+	0	ID=Cattle_Y_C01337;Parent=Cattle_Y_T01002;Dbxref=GeneID:132344472,GenBank:XP_059740054.1;Name=XP_059740054.1;gbkey=CDS;gene=LOC132344472;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740054.1;gene_id=Cattle_Y_G00657;transcript_id=Cattle_Y_T01002;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40267308	40267419	.	+	0	ID=Cattle_Y_C01338;Parent=Cattle_Y_T01002;Dbxref=GeneID:132344472,GenBank:XP_059740054.1;Name=XP_059740054.1;gbkey=CDS;gene=LOC132344472;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740054.1;gene_id=Cattle_Y_G00657;transcript_id=Cattle_Y_T01002;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40267561	40267706	.	+	2	ID=Cattle_Y_C01339;Parent=Cattle_Y_T01002;Dbxref=GeneID:132344472,GenBank:XP_059740054.1;Name=XP_059740054.1;gbkey=CDS;gene=LOC132344472;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740054.1;gene_id=Cattle_Y_G00657;transcript_id=Cattle_Y_T01002;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40267826	40267912	.	+	0	ID=Cattle_Y_C01340;Parent=Cattle_Y_T01002;Dbxref=GeneID:132344472,GenBank:XP_059740054.1;Name=XP_059740054.1;gbkey=CDS;gene=LOC132344472;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740054.1;gene_id=Cattle_Y_G00657;transcript_id=Cattle_Y_T01002;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40269171	40269194	.	+	0	ID=Cattle_Y_C01341;Parent=Cattle_Y_T01002;Dbxref=GeneID:132344472,GenBank:XP_059740054.1;Name=XP_059740054.1;gbkey=CDS;gene=LOC132344472;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740054.1;gene_id=Cattle_Y_G00657;transcript_id=Cattle_Y_T01002;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	40265741	40269390	.	+	.	ID=Cattle_Y_T01003;Parent=Cattle_Y_G00657;Dbxref=GeneID:132344472,GenBank:XM_059884072.1;Name=XM_059884072.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344472;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T01003;gene_id=Cattle_Y_G00657;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884072.1
haplotype2-0000357	CAT	exon	40265741	40266515	.	+	.	ID=Cattle_Y_E01695;Parent=Cattle_Y_T01003;Dbxref=GeneID:132344472,GenBank:XM_059884072.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344472;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01003;gene_id=Cattle_Y_G00657;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884072.1-1
haplotype2-0000357	CAT	exon	40267308	40267419	.	+	.	ID=Cattle_Y_E01696;Parent=Cattle_Y_T01003;Dbxref=GeneID:132344472,GenBank:XM_059884072.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344472;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01003;gene_id=Cattle_Y_G00657;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884072.1-2
haplotype2-0000357	CAT	exon	40267561	40267706	.	+	.	ID=Cattle_Y_E01697;Parent=Cattle_Y_T01003;Dbxref=GeneID:132344472,GenBank:XM_059884072.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344472;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01003;gene_id=Cattle_Y_G00657;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884072.1-3
haplotype2-0000357	CAT	exon	40267826	40267912	.	+	.	ID=Cattle_Y_E01698;Parent=Cattle_Y_T01003;Dbxref=GeneID:132344472,GenBank:XM_059884072.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344472;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01003;gene_id=Cattle_Y_G00657;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884072.1-4
haplotype2-0000357	CAT	exon	40269171	40269390	.	+	.	ID=Cattle_Y_E01699;Parent=Cattle_Y_T01003;Dbxref=GeneID:132344472,GenBank:XM_059884072.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344472;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01003;gene_id=Cattle_Y_G00657;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884072.1-5
haplotype2-0000357	CAT	CDS	40265967	40266515	.	+	0	ID=Cattle_Y_C01342;Parent=Cattle_Y_T01003;Dbxref=GeneID:132344472,GenBank:XP_059740055.1;Name=XP_059740055.1;gbkey=CDS;gene=LOC132344472;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740055.1;gene_id=Cattle_Y_G00657;transcript_id=Cattle_Y_T01003;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40267308	40267419	.	+	0	ID=Cattle_Y_C01343;Parent=Cattle_Y_T01003;Dbxref=GeneID:132344472,GenBank:XP_059740055.1;Name=XP_059740055.1;gbkey=CDS;gene=LOC132344472;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740055.1;gene_id=Cattle_Y_G00657;transcript_id=Cattle_Y_T01003;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40267561	40267706	.	+	2	ID=Cattle_Y_C01344;Parent=Cattle_Y_T01003;Dbxref=GeneID:132344472,GenBank:XP_059740055.1;Name=XP_059740055.1;gbkey=CDS;gene=LOC132344472;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740055.1;gene_id=Cattle_Y_G00657;transcript_id=Cattle_Y_T01003;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40267826	40267912	.	+	0	ID=Cattle_Y_C01345;Parent=Cattle_Y_T01003;Dbxref=GeneID:132344472,GenBank:XP_059740055.1;Name=XP_059740055.1;gbkey=CDS;gene=LOC132344472;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740055.1;gene_id=Cattle_Y_G00657;transcript_id=Cattle_Y_T01003;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40269171	40269194	.	+	0	ID=Cattle_Y_C01346;Parent=Cattle_Y_T01003;Dbxref=GeneID:132344472,GenBank:XP_059740055.1;Name=XP_059740055.1;gbkey=CDS;gene=LOC132344472;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740055.1;gene_id=Cattle_Y_G00657;transcript_id=Cattle_Y_T01003;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	40281437	40285090	.	+	.	ID=Cattle_Y_G00658;Dbxref=GeneID:132344511;Name=LOC132344511;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344511;gene_biotype=protein_coding;gene_id=Cattle_Y_G00658;source_id=gene-LOC132344511
haplotype2-0000357	CAT	mRNA	40281437	40285090	.	+	.	ID=Cattle_Y_T01004;Parent=Cattle_Y_G00658;Dbxref=GeneID:132344511,GenBank:XM_059884143.1;Name=XM_059884143.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344511;model_evidence=Supporting evidence includes similarity to: 4 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01004;gene_id=Cattle_Y_G00658;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884143.1
haplotype2-0000357	CAT	exon	40281437	40282194	.	+	.	ID=Cattle_Y_E01700;Parent=Cattle_Y_T01004;Dbxref=GeneID:132344511,GenBank:XM_059884143.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344511;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01004;gene_id=Cattle_Y_G00658;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884143.1-1
haplotype2-0000357	CAT	exon	40282788	40282865	.	+	.	ID=Cattle_Y_E01701;Parent=Cattle_Y_T01004;Dbxref=GeneID:132344511,GenBank:XM_059884143.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344511;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01004;gene_id=Cattle_Y_G00658;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884143.1-1
haplotype2-0000357	CAT	exon	40283008	40283119	.	+	.	ID=Cattle_Y_E01702;Parent=Cattle_Y_T01004;Dbxref=GeneID:132344511,GenBank:XM_059884143.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344511;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01004;gene_id=Cattle_Y_G00658;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884143.1-1
haplotype2-0000357	CAT	exon	40283261	40283406	.	+	.	ID=Cattle_Y_E01703;Parent=Cattle_Y_T01004;Dbxref=GeneID:132344511,GenBank:XM_059884143.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344511;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01004;gene_id=Cattle_Y_G00658;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884143.1-1
haplotype2-0000357	CAT	exon	40283526	40283612	.	+	.	ID=Cattle_Y_E01704;Parent=Cattle_Y_T01004;Dbxref=GeneID:132344511,GenBank:XM_059884143.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344511;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01004;gene_id=Cattle_Y_G00658;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884143.1-1
haplotype2-0000357	CAT	exon	40284871	40285090	.	+	.	ID=Cattle_Y_E01705;Parent=Cattle_Y_T01004;Dbxref=GeneID:132344511,GenBank:XM_059884143.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344511;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01004;gene_id=Cattle_Y_G00658;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884143.1-6
haplotype2-0000357	CAT	CDS	40281667	40282194	.	+	0	ID=Cattle_Y_C01347;Parent=Cattle_Y_T01004;gene_id=Cattle_Y_G00658;transcript_id=Cattle_Y_T01004;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40282788	40282865	.	+	0	ID=Cattle_Y_C01348;Parent=Cattle_Y_T01004;gene_id=Cattle_Y_G00658;transcript_id=Cattle_Y_T01004;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40283008	40283119	.	+	0	ID=Cattle_Y_C01349;Parent=Cattle_Y_T01004;gene_id=Cattle_Y_G00658;transcript_id=Cattle_Y_T01004;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40283261	40283406	.	+	2	ID=Cattle_Y_C01350;Parent=Cattle_Y_T01004;gene_id=Cattle_Y_G00658;transcript_id=Cattle_Y_T01004;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40283526	40283612	.	+	0	ID=Cattle_Y_C01351;Parent=Cattle_Y_T01004;gene_id=Cattle_Y_G00658;transcript_id=Cattle_Y_T01004;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40284871	40284894	.	+	0	ID=Cattle_Y_C01352;Parent=Cattle_Y_T01004;gene_id=Cattle_Y_G00658;transcript_id=Cattle_Y_T01004;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	40297139	40300790	.	+	.	ID=Cattle_Y_G00659;Dbxref=GeneID:132344509;Name=LOC132344509;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344509;gene_biotype=protein_coding;gene_id=Cattle_Y_G00659;source_id=gene-LOC132344509
haplotype2-0000357	CAT	mRNA	40297141	40300790	.	+	.	ID=Cattle_Y_T01005;Parent=Cattle_Y_G00659;Dbxref=GeneID:132344509,GenBank:XM_059884140.1;Name=XM_059884140.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344509;model_evidence=Supporting evidence includes similarity to: 4 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T01005;gene_id=Cattle_Y_G00659;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884140.1
haplotype2-0000357	CAT	exon	40297141	40297894	.	+	.	ID=Cattle_Y_E01706;Parent=Cattle_Y_T01005;Dbxref=GeneID:132344509,GenBank:XM_059884140.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344509;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01005;gene_id=Cattle_Y_G00659;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884140.1-1
haplotype2-0000357	CAT	exon	40298488	40298565	.	+	.	ID=Cattle_Y_E01707;Parent=Cattle_Y_T01005;Dbxref=GeneID:132344509,GenBank:XM_059884140.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344509;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01005;gene_id=Cattle_Y_G00659;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884140.1-1
haplotype2-0000357	CAT	exon	40298708	40298819	.	+	.	ID=Cattle_Y_E01708;Parent=Cattle_Y_T01005;Dbxref=GeneID:132344509,GenBank:XM_059884140.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344509;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01005;gene_id=Cattle_Y_G00659;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884140.1-1
haplotype2-0000357	CAT	exon	40298961	40299106	.	+	.	ID=Cattle_Y_E01709;Parent=Cattle_Y_T01005;Dbxref=GeneID:132344509,GenBank:XM_059884140.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344509;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01005;gene_id=Cattle_Y_G00659;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884140.1-1
haplotype2-0000357	CAT	exon	40299226	40299312	.	+	.	ID=Cattle_Y_E01710;Parent=Cattle_Y_T01005;Dbxref=GeneID:132344509,GenBank:XM_059884140.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344509;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01005;gene_id=Cattle_Y_G00659;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884140.1-1
haplotype2-0000357	CAT	exon	40300571	40300790	.	+	.	ID=Cattle_Y_E01711;Parent=Cattle_Y_T01005;Dbxref=GeneID:132344509,GenBank:XM_059884140.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344509;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01005;gene_id=Cattle_Y_G00659;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884140.1-6
haplotype2-0000357	CAT	CDS	40297367	40297894	.	+	0	ID=Cattle_Y_C01353;Parent=Cattle_Y_T01005;gene_id=Cattle_Y_G00659;transcript_id=Cattle_Y_T01005;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40298488	40298565	.	+	0	ID=Cattle_Y_C01354;Parent=Cattle_Y_T01005;gene_id=Cattle_Y_G00659;transcript_id=Cattle_Y_T01005;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40298708	40298819	.	+	0	ID=Cattle_Y_C01355;Parent=Cattle_Y_T01005;gene_id=Cattle_Y_G00659;transcript_id=Cattle_Y_T01005;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40298961	40299106	.	+	2	ID=Cattle_Y_C01356;Parent=Cattle_Y_T01005;gene_id=Cattle_Y_G00659;transcript_id=Cattle_Y_T01005;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40299226	40299312	.	+	0	ID=Cattle_Y_C01357;Parent=Cattle_Y_T01005;gene_id=Cattle_Y_G00659;transcript_id=Cattle_Y_T01005;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40300571	40300594	.	+	0	ID=Cattle_Y_C01358;Parent=Cattle_Y_T01005;gene_id=Cattle_Y_G00659;transcript_id=Cattle_Y_T01005;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	40297139	40300790	.	+	.	ID=Cattle_Y_T01006;Parent=Cattle_Y_G00659;Dbxref=GeneID:132344509,GenBank:XM_059884141.1;Name=XM_059884141.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344509;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T01006;gene_id=Cattle_Y_G00659;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884141.1
haplotype2-0000357	CAT	exon	40297139	40297915	.	+	.	ID=Cattle_Y_E01712;Parent=Cattle_Y_T01006;Dbxref=GeneID:132344509,GenBank:XM_059884141.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344509;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01006;gene_id=Cattle_Y_G00659;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884141.1-1
haplotype2-0000357	CAT	exon	40298708	40298819	.	+	.	ID=Cattle_Y_E01713;Parent=Cattle_Y_T01006;Dbxref=GeneID:132344509,GenBank:XM_059884141.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344509;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01006;gene_id=Cattle_Y_G00659;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884141.1-1
haplotype2-0000357	CAT	exon	40298961	40299106	.	+	.	ID=Cattle_Y_E01714;Parent=Cattle_Y_T01006;Dbxref=GeneID:132344509,GenBank:XM_059884141.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344509;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01006;gene_id=Cattle_Y_G00659;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884141.1-1
haplotype2-0000357	CAT	exon	40299226	40299312	.	+	.	ID=Cattle_Y_E01715;Parent=Cattle_Y_T01006;Dbxref=GeneID:132344509,GenBank:XM_059884141.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344509;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01006;gene_id=Cattle_Y_G00659;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884141.1-1
haplotype2-0000357	CAT	exon	40300571	40300790	.	+	.	ID=Cattle_Y_E01716;Parent=Cattle_Y_T01006;Dbxref=GeneID:132344509,GenBank:XM_059884141.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344509;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01006;gene_id=Cattle_Y_G00659;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884141.1-5
haplotype2-0000357	CAT	CDS	40297367	40297915	.	+	0	ID=Cattle_Y_C01359;Parent=Cattle_Y_T01006;gene_id=Cattle_Y_G00659;transcript_id=Cattle_Y_T01006;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40298708	40298819	.	+	0	ID=Cattle_Y_C01360;Parent=Cattle_Y_T01006;gene_id=Cattle_Y_G00659;transcript_id=Cattle_Y_T01006;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40298961	40299106	.	+	2	ID=Cattle_Y_C01361;Parent=Cattle_Y_T01006;gene_id=Cattle_Y_G00659;transcript_id=Cattle_Y_T01006;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40299226	40299312	.	+	0	ID=Cattle_Y_C01362;Parent=Cattle_Y_T01006;gene_id=Cattle_Y_G00659;transcript_id=Cattle_Y_T01006;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40300571	40300594	.	+	0	ID=Cattle_Y_C01363;Parent=Cattle_Y_T01006;gene_id=Cattle_Y_G00659;transcript_id=Cattle_Y_T01006;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	40312851	40316491	.	+	.	ID=Cattle_Y_G00660;Dbxref=GeneID:132344512;Name=LOC132344512;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344512;gene_biotype=protein_coding;gene_id=Cattle_Y_G00660;source_id=gene-LOC132344512
haplotype2-0000357	CAT	mRNA	40312852	40316491	.	+	.	ID=Cattle_Y_T01007;Parent=Cattle_Y_G00660;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;Name=XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;model_evidence=Supporting evidence includes similarity to: 3 ESTs%2C 3 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T01007;gene_id=Cattle_Y_G00660;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884144.1
haplotype2-0000357	CAT	exon	40312852	40313595	.	+	.	ID=Cattle_Y_E01717;Parent=Cattle_Y_T01007;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01007;gene_id=Cattle_Y_G00660;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-1
haplotype2-0000357	CAT	exon	40314189	40314266	.	+	.	ID=Cattle_Y_E01718;Parent=Cattle_Y_T01007;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01007;gene_id=Cattle_Y_G00660;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-2
haplotype2-0000357	CAT	exon	40314409	40314520	.	+	.	ID=Cattle_Y_E01719;Parent=Cattle_Y_T01007;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01007;gene_id=Cattle_Y_G00660;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-3
haplotype2-0000357	CAT	exon	40314662	40314807	.	+	.	ID=Cattle_Y_E01720;Parent=Cattle_Y_T01007;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01007;gene_id=Cattle_Y_G00660;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-4
haplotype2-0000357	CAT	exon	40314927	40315013	.	+	.	ID=Cattle_Y_E01721;Parent=Cattle_Y_T01007;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01007;gene_id=Cattle_Y_G00660;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-5
haplotype2-0000357	CAT	exon	40316272	40316491	.	+	.	ID=Cattle_Y_E01722;Parent=Cattle_Y_T01007;Dbxref=GeneID:132344512,GenBank:XM_059884144.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01007;gene_id=Cattle_Y_G00660;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884144.1-6
haplotype2-0000357	CAT	CDS	40313068	40313595	.	+	0	ID=Cattle_Y_C01364;Parent=Cattle_Y_T01007;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1;gene_id=Cattle_Y_G00660;transcript_id=Cattle_Y_T01007;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40314189	40314266	.	+	0	ID=Cattle_Y_C01365;Parent=Cattle_Y_T01007;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1;gene_id=Cattle_Y_G00660;transcript_id=Cattle_Y_T01007;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40314409	40314520	.	+	0	ID=Cattle_Y_C01366;Parent=Cattle_Y_T01007;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1;gene_id=Cattle_Y_G00660;transcript_id=Cattle_Y_T01007;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40314662	40314807	.	+	2	ID=Cattle_Y_C01367;Parent=Cattle_Y_T01007;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1;gene_id=Cattle_Y_G00660;transcript_id=Cattle_Y_T01007;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40314927	40315013	.	+	0	ID=Cattle_Y_C01368;Parent=Cattle_Y_T01007;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1;gene_id=Cattle_Y_G00660;transcript_id=Cattle_Y_T01007;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40316272	40316295	.	+	0	ID=Cattle_Y_C01369;Parent=Cattle_Y_T01007;Dbxref=GeneID:132344512,GenBank:XP_059740127.1;Name=XP_059740127.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740127.1;gene_id=Cattle_Y_G00660;transcript_id=Cattle_Y_T01007;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	40312851	40316491	.	+	.	ID=Cattle_Y_T01008;Parent=Cattle_Y_G00660;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;Name=XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T01008;gene_id=Cattle_Y_G00660;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884145.1
haplotype2-0000357	CAT	exon	40312851	40313616	.	+	.	ID=Cattle_Y_E01723;Parent=Cattle_Y_T01008;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01008;gene_id=Cattle_Y_G00660;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-1
haplotype2-0000357	CAT	exon	40314409	40314520	.	+	.	ID=Cattle_Y_E01724;Parent=Cattle_Y_T01008;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01008;gene_id=Cattle_Y_G00660;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-2
haplotype2-0000357	CAT	exon	40314662	40314807	.	+	.	ID=Cattle_Y_E01725;Parent=Cattle_Y_T01008;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01008;gene_id=Cattle_Y_G00660;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-3
haplotype2-0000357	CAT	exon	40314927	40315013	.	+	.	ID=Cattle_Y_E01726;Parent=Cattle_Y_T01008;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01008;gene_id=Cattle_Y_G00660;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-4
haplotype2-0000357	CAT	exon	40316272	40316491	.	+	.	ID=Cattle_Y_E01727;Parent=Cattle_Y_T01008;Dbxref=GeneID:132344512,GenBank:XM_059884145.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01008;gene_id=Cattle_Y_G00660;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884145.1-5
haplotype2-0000357	CAT	CDS	40313068	40313616	.	+	0	ID=Cattle_Y_C01370;Parent=Cattle_Y_T01008;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1;gene_id=Cattle_Y_G00660;transcript_id=Cattle_Y_T01008;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40314409	40314520	.	+	0	ID=Cattle_Y_C01371;Parent=Cattle_Y_T01008;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1;gene_id=Cattle_Y_G00660;transcript_id=Cattle_Y_T01008;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40314662	40314807	.	+	2	ID=Cattle_Y_C01372;Parent=Cattle_Y_T01008;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1;gene_id=Cattle_Y_G00660;transcript_id=Cattle_Y_T01008;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40314927	40315013	.	+	0	ID=Cattle_Y_C01373;Parent=Cattle_Y_T01008;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1;gene_id=Cattle_Y_G00660;transcript_id=Cattle_Y_T01008;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40316272	40316295	.	+	0	ID=Cattle_Y_C01374;Parent=Cattle_Y_T01008;Dbxref=GeneID:132344512,GenBank:XP_059740128.1;Name=XP_059740128.1;gbkey=CDS;gene=LOC132344512;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740128.1;gene_id=Cattle_Y_G00660;transcript_id=Cattle_Y_T01008;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	40333500	40337046	.	+	.	ID=Cattle_Y_G00661;Dbxref=GeneID:132344638;Name=LOC132344638;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344638;gene_biotype=protein_coding;gene_id=Cattle_Y_G00661;source_id=gene-LOC132344638
haplotype2-0000357	CAT	mRNA	40333500	40337046	.	+	.	ID=Cattle_Y_T01009;Parent=Cattle_Y_G00661;Dbxref=GeneID:132344638,GenBank:XM_059884292.1;Name=XM_059884292.1;gbkey=mRNA;gene=LOC132344638;model_evidence=Supporting evidence includes similarity to: 6 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01009;gene_id=Cattle_Y_G00661;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884292.1
haplotype2-0000357	CAT	exon	40333500	40333686	.	+	.	ID=Cattle_Y_E01728;Parent=Cattle_Y_T01009;Dbxref=GeneID:132344638,GenBank:XM_059884292.1;gbkey=mRNA;gene=LOC132344638;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01009;gene_id=Cattle_Y_G00661;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884292.1-1
haplotype2-0000357	CAT	exon	40333738	40334174	.	+	.	ID=Cattle_Y_E01729;Parent=Cattle_Y_T01009;Dbxref=GeneID:132344638,GenBank:XM_059884292.1;gbkey=mRNA;gene=LOC132344638;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01009;gene_id=Cattle_Y_G00661;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884292.1-2
haplotype2-0000357	CAT	exon	40336241	40336318	.	+	.	ID=Cattle_Y_E01730;Parent=Cattle_Y_T01009;Dbxref=GeneID:132344638,GenBank:XM_059884292.1;gbkey=mRNA;gene=LOC132344638;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01009;gene_id=Cattle_Y_G00661;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884292.1-3
haplotype2-0000357	CAT	exon	40336507	40336612	.	+	.	ID=Cattle_Y_E01731;Parent=Cattle_Y_T01009;Dbxref=GeneID:132344638,GenBank:XM_059884292.1;gbkey=mRNA;gene=LOC132344638;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01009;gene_id=Cattle_Y_G00661;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884292.1-4
haplotype2-0000357	CAT	exon	40336707	40336852	.	+	.	ID=Cattle_Y_E01732;Parent=Cattle_Y_T01009;Dbxref=GeneID:132344638,GenBank:XM_059884292.1;gbkey=mRNA;gene=LOC132344638;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01009;gene_id=Cattle_Y_G00661;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884292.1-5
haplotype2-0000357	CAT	exon	40336969	40337046	.	+	.	ID=Cattle_Y_E01733;Parent=Cattle_Y_T01009;Dbxref=GeneID:132344638,GenBank:XM_059884292.1;gbkey=mRNA;gene=LOC132344638;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01009;gene_id=Cattle_Y_G00661;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884292.1-6
haplotype2-0000357	CAT	CDS	40333563	40333686	.	+	0	ID=Cattle_Y_C01375;Parent=Cattle_Y_T01009;Dbxref=GeneID:132344638,GenBank:XP_059740275.1;Name=XP_059740275.1;gbkey=CDS;gene=LOC132344638;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740275.1;gene_id=Cattle_Y_G00661;transcript_id=Cattle_Y_T01009;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40333738	40334174	.	+	2	ID=Cattle_Y_C01376;Parent=Cattle_Y_T01009;Dbxref=GeneID:132344638,GenBank:XP_059740275.1;Name=XP_059740275.1;gbkey=CDS;gene=LOC132344638;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740275.1;gene_id=Cattle_Y_G00661;transcript_id=Cattle_Y_T01009;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40336241	40336318	.	+	0	ID=Cattle_Y_C01377;Parent=Cattle_Y_T01009;Dbxref=GeneID:132344638,GenBank:XP_059740275.1;Name=XP_059740275.1;gbkey=CDS;gene=LOC132344638;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740275.1;gene_id=Cattle_Y_G00661;transcript_id=Cattle_Y_T01009;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40336507	40336612	.	+	0	ID=Cattle_Y_C01378;Parent=Cattle_Y_T01009;Dbxref=GeneID:132344638,GenBank:XP_059740275.1;Name=XP_059740275.1;gbkey=CDS;gene=LOC132344638;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740275.1;gene_id=Cattle_Y_G00661;transcript_id=Cattle_Y_T01009;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40336707	40336852	.	+	2	ID=Cattle_Y_C01379;Parent=Cattle_Y_T01009;Dbxref=GeneID:132344638,GenBank:XP_059740275.1;Name=XP_059740275.1;gbkey=CDS;gene=LOC132344638;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740275.1;gene_id=Cattle_Y_G00661;transcript_id=Cattle_Y_T01009;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40336969	40337046	.	+	0	ID=Cattle_Y_C01380;Parent=Cattle_Y_T01009;Dbxref=GeneID:132344638,GenBank:XP_059740275.1;Name=XP_059740275.1;gbkey=CDS;gene=LOC132344638;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740275.1;gene_id=Cattle_Y_G00661;transcript_id=Cattle_Y_T01009;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	40346681	40348011	.	-	.	ID=Cattle_Y_G00662;Dbxref=GeneID:132344637;Name=LOC132344637;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344637;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00662;source_id=gene-LOC132344637
haplotype2-0000357	CAT	exon	40346681	40348011	.	-	.	ID=Cattle_Y_T01010;Parent=Cattle_Y_G00662;Dbxref=GeneID:132344637;gbkey=exon;gene=LOC132344637;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 77%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00662;transcript_id=Cattle_Y_T01010;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344637
haplotype2-0000357	CAT	gene	40394234	40399444	.	+	.	ID=Cattle_Y_G00663;Dbxref=GeneID:132344482;Name=LOC132344482;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC132344482;gene_biotype=protein_coding;gene_id=Cattle_Y_G00663;source_id=gene-LOC132344482
haplotype2-0000357	CAT	mRNA	40395226	40399444	.	+	.	ID=Cattle_Y_T01011;Parent=Cattle_Y_G00663;Dbxref=GeneID:132344482,GenBank:XM_059884092.1;Name=XM_059884092.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344482;model_evidence=Supporting evidence includes similarity to: 1 mRNA%2C 1 EST%2C 5 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X1;transcript_id=Cattle_Y_T01011;gene_id=Cattle_Y_G00663;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884092.1
haplotype2-0000357	CAT	exon	40395226	40395286	.	+	.	ID=Cattle_Y_E01734;Parent=Cattle_Y_T01011;Dbxref=GeneID:132344482,GenBank:XM_059884092.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344482;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T01011;gene_id=Cattle_Y_G00663;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884092.1-1
haplotype2-0000357	CAT	exon	40396654	40396973	.	+	.	ID=Cattle_Y_E01735;Parent=Cattle_Y_T01011;Dbxref=GeneID:132344482,GenBank:XM_059884092.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344482;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T01011;gene_id=Cattle_Y_G00663;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884092.1-2
haplotype2-0000357	CAT	exon	40397258	40397860	.	+	.	ID=Cattle_Y_E01736;Parent=Cattle_Y_T01011;Dbxref=GeneID:132344482,GenBank:XM_059884092.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344482;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T01011;gene_id=Cattle_Y_G00663;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884092.1-3
haplotype2-0000357	CAT	exon	40398619	40399444	.	+	.	ID=Cattle_Y_E01737;Parent=Cattle_Y_T01011;Dbxref=GeneID:132344482,GenBank:XM_059884092.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344482;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T01011;gene_id=Cattle_Y_G00663;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884092.1-4
haplotype2-0000357	CAT	CDS	40395251	40395286	.	+	0	ID=Cattle_Y_C01381;Parent=Cattle_Y_T01011;Dbxref=GeneID:132344482,GenBank:XP_059740075.1;Name=XP_059740075.1;gbkey=CDS;gene=LOC132344482;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740075.1;gene_id=Cattle_Y_G00663;transcript_id=Cattle_Y_T01011;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40396654	40396973	.	+	0	ID=Cattle_Y_C01382;Parent=Cattle_Y_T01011;Dbxref=GeneID:132344482,GenBank:XP_059740075.1;Name=XP_059740075.1;gbkey=CDS;gene=LOC132344482;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740075.1;gene_id=Cattle_Y_G00663;transcript_id=Cattle_Y_T01011;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40397258	40397860	.	+	1	ID=Cattle_Y_C01383;Parent=Cattle_Y_T01011;Dbxref=GeneID:132344482,GenBank:XP_059740075.1;Name=XP_059740075.1;gbkey=CDS;gene=LOC132344482;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740075.1;gene_id=Cattle_Y_G00663;transcript_id=Cattle_Y_T01011;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40398619	40399195	.	+	1	ID=Cattle_Y_C01384;Parent=Cattle_Y_T01011;Dbxref=GeneID:132344482,GenBank:XP_059740075.1;Name=XP_059740075.1;gbkey=CDS;gene=LOC132344482;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740075.1;gene_id=Cattle_Y_G00663;transcript_id=Cattle_Y_T01011;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	40394234	40399444	.	+	.	ID=Cattle_Y_T01012;Parent=Cattle_Y_G00663;Dbxref=GeneID:132344482,GenBank:XM_059884093.1;Name=XM_059884093.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344482;model_evidence=Supporting evidence includes similarity to: 1 mRNA%2C 1 EST%2C 4 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X2;transcript_id=Cattle_Y_T01012;gene_id=Cattle_Y_G00663;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884093.1
haplotype2-0000357	CAT	exon	40394234	40394403	.	+	.	ID=Cattle_Y_E01738;Parent=Cattle_Y_T01012;Dbxref=GeneID:132344482,GenBank:XM_059884093.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344482;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T01012;gene_id=Cattle_Y_G00663;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884093.1-1
haplotype2-0000357	CAT	exon	40396654	40396973	.	+	.	ID=Cattle_Y_E01739;Parent=Cattle_Y_T01012;Dbxref=GeneID:132344482,GenBank:XM_059884093.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344482;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T01012;gene_id=Cattle_Y_G00663;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884093.1-2
haplotype2-0000357	CAT	exon	40397258	40397860	.	+	.	ID=Cattle_Y_E01740;Parent=Cattle_Y_T01012;Dbxref=GeneID:132344482,GenBank:XM_059884093.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344482;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T01012;gene_id=Cattle_Y_G00663;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884093.1-3
haplotype2-0000357	CAT	exon	40398619	40399444	.	+	.	ID=Cattle_Y_E01741;Parent=Cattle_Y_T01012;Dbxref=GeneID:132344482,GenBank:XM_059884093.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344482;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T01012;gene_id=Cattle_Y_G00663;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884093.1-4
haplotype2-0000357	CAT	CDS	40396681	40396973	.	+	0	ID=Cattle_Y_C01385;Parent=Cattle_Y_T01012;Dbxref=GeneID:132344482,GenBank:XP_059740076.1;Name=XP_059740076.1;gbkey=CDS;gene=LOC132344482;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740076.1;gene_id=Cattle_Y_G00663;transcript_id=Cattle_Y_T01012;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40397258	40397860	.	+	1	ID=Cattle_Y_C01386;Parent=Cattle_Y_T01012;Dbxref=GeneID:132344482,GenBank:XP_059740076.1;Name=XP_059740076.1;gbkey=CDS;gene=LOC132344482;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740076.1;gene_id=Cattle_Y_G00663;transcript_id=Cattle_Y_T01012;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40398619	40399195	.	+	1	ID=Cattle_Y_C01387;Parent=Cattle_Y_T01012;Dbxref=GeneID:132344482,GenBank:XP_059740076.1;Name=XP_059740076.1;gbkey=CDS;gene=LOC132344482;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740076.1;gene_id=Cattle_Y_G00663;transcript_id=Cattle_Y_T01012;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	40402365	40414085	.	-	.	ID=Cattle_Y_G00664;Dbxref=GeneID:132344435;Name=LOC132344435;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344435;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00664;source_id=gene-LOC132344435
haplotype2-0000357	CAT	exon	40402365	40402447	.	-	.	ID=Cattle_Y_T01013;Parent=Cattle_Y_G00664;Dbxref=GeneID:132344435;gbkey=exon;gene=LOC132344435;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00664;transcript_id=Cattle_Y_T01013;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344435-4
haplotype2-0000357	CAT	exon	40407816	40408542	.	-	.	ID=Cattle_Y_T01014;Parent=Cattle_Y_G00664;Dbxref=GeneID:132344435;gbkey=exon;gene=LOC132344435;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00664;transcript_id=Cattle_Y_T01014;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344435-3
haplotype2-0000357	CAT	exon	40408587	40408952	.	-	.	ID=Cattle_Y_T01015;Parent=Cattle_Y_G00664;Dbxref=GeneID:132344435;gbkey=exon;gene=LOC132344435;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00664;transcript_id=Cattle_Y_T01015;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344435-2
haplotype2-0000357	CAT	exon	40414030	40414085	.	-	.	ID=Cattle_Y_T01016;Parent=Cattle_Y_G00664;Dbxref=GeneID:132344435;gbkey=exon;gene=LOC132344435;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00664;transcript_id=Cattle_Y_T01016;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344435
haplotype2-0000357	CAT	gene	40421032	40426250	.	-	.	ID=Cattle_Y_G00665;Dbxref=GeneID:132344627;Name=LOC132344627;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC132344627;gene_biotype=protein_coding;gene_id=Cattle_Y_G00665;source_id=gene-LOC132344627
haplotype2-0000357	CAT	mRNA	40421032	40426250	.	-	.	ID=Cattle_Y_T01017;Parent=Cattle_Y_G00665;Dbxref=GeneID:132344627,GenBank:XM_059884284.1;Name=XM_059884284.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344627;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 4 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X1;transcript_id=Cattle_Y_T01017;gene_id=Cattle_Y_G00665;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884284.1
haplotype2-0000357	CAT	exon	40421032	40421857	.	-	.	ID=Cattle_Y_E01742;Parent=Cattle_Y_T01017;Dbxref=GeneID:132344627,GenBank:XM_059884284.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344627;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T01017;gene_id=Cattle_Y_G00665;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884284.1-4
haplotype2-0000357	CAT	exon	40422616	40423218	.	-	.	ID=Cattle_Y_E01743;Parent=Cattle_Y_T01017;Dbxref=GeneID:132344627,GenBank:XM_059884284.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344627;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T01017;gene_id=Cattle_Y_G00665;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884284.1-3
haplotype2-0000357	CAT	exon	40423503	40423822	.	-	.	ID=Cattle_Y_E01744;Parent=Cattle_Y_T01017;Dbxref=GeneID:132344627,GenBank:XM_059884284.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344627;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T01017;gene_id=Cattle_Y_G00665;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884284.1-2
haplotype2-0000357	CAT	exon	40426081	40426250	.	-	.	ID=Cattle_Y_E01745;Parent=Cattle_Y_T01017;Dbxref=GeneID:132344627,GenBank:XM_059884284.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344627;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T01017;gene_id=Cattle_Y_G00665;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884284.1-1
haplotype2-0000357	CAT	CDS	40421281	40421857	.	-	1	ID=Cattle_Y_C01388;Parent=Cattle_Y_T01017;Dbxref=GeneID:132344627,GenBank:XP_059740267.1;Name=XP_059740267.1;gbkey=CDS;gene=LOC132344627;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740267.1;gene_id=Cattle_Y_G00665;transcript_id=Cattle_Y_T01017;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40422616	40423218	.	-	1	ID=Cattle_Y_C01389;Parent=Cattle_Y_T01017;Dbxref=GeneID:132344627,GenBank:XP_059740267.1;Name=XP_059740267.1;gbkey=CDS;gene=LOC132344627;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740267.1;gene_id=Cattle_Y_G00665;transcript_id=Cattle_Y_T01017;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40423503	40423795	.	-	0	ID=Cattle_Y_C01390;Parent=Cattle_Y_T01017;Dbxref=GeneID:132344627,GenBank:XP_059740267.1;Name=XP_059740267.1;gbkey=CDS;gene=LOC132344627;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740267.1;gene_id=Cattle_Y_G00665;transcript_id=Cattle_Y_T01017;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	40421032	40425258	.	-	.	ID=Cattle_Y_T01018;Parent=Cattle_Y_G00665;Dbxref=GeneID:132344627,GenBank:XM_059884285.1;Name=XM_059884285.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344627;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 5 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X2;transcript_id=Cattle_Y_T01018;gene_id=Cattle_Y_G00665;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884285.1
haplotype2-0000357	CAT	exon	40421032	40421857	.	-	.	ID=Cattle_Y_E01746;Parent=Cattle_Y_T01018;Dbxref=GeneID:132344627,GenBank:XM_059884285.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344627;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T01018;gene_id=Cattle_Y_G00665;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884285.1-4
haplotype2-0000357	CAT	exon	40422616	40423218	.	-	.	ID=Cattle_Y_E01747;Parent=Cattle_Y_T01018;Dbxref=GeneID:132344627,GenBank:XM_059884285.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344627;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T01018;gene_id=Cattle_Y_G00665;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884285.1-3
haplotype2-0000357	CAT	exon	40423503	40423822	.	-	.	ID=Cattle_Y_E01748;Parent=Cattle_Y_T01018;Dbxref=GeneID:132344627,GenBank:XM_059884285.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344627;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T01018;gene_id=Cattle_Y_G00665;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884285.1-2
haplotype2-0000357	CAT	exon	40425198	40425258	.	-	.	ID=Cattle_Y_E01749;Parent=Cattle_Y_T01018;Dbxref=GeneID:132344627,GenBank:XM_059884285.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344627;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T01018;gene_id=Cattle_Y_G00665;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884285.1-1
haplotype2-0000357	CAT	CDS	40421281	40421857	.	-	1	ID=Cattle_Y_C01391;Parent=Cattle_Y_T01018;Dbxref=GeneID:132344627,GenBank:XP_059740268.1;Name=XP_059740268.1;gbkey=CDS;gene=LOC132344627;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740268.1;gene_id=Cattle_Y_G00665;transcript_id=Cattle_Y_T01018;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40422616	40423218	.	-	1	ID=Cattle_Y_C01392;Parent=Cattle_Y_T01018;Dbxref=GeneID:132344627,GenBank:XP_059740268.1;Name=XP_059740268.1;gbkey=CDS;gene=LOC132344627;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740268.1;gene_id=Cattle_Y_G00665;transcript_id=Cattle_Y_T01018;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40423503	40423822	.	-	0	ID=Cattle_Y_C01393;Parent=Cattle_Y_T01018;Dbxref=GeneID:132344627,GenBank:XP_059740268.1;Name=XP_059740268.1;gbkey=CDS;gene=LOC132344627;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740268.1;gene_id=Cattle_Y_G00665;transcript_id=Cattle_Y_T01018;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40425198	40425233	.	-	0	ID=Cattle_Y_C01394;Parent=Cattle_Y_T01018;Dbxref=GeneID:132344627,GenBank:XP_059740268.1;Name=XP_059740268.1;gbkey=CDS;gene=LOC132344627;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740268.1;gene_id=Cattle_Y_G00665;transcript_id=Cattle_Y_T01018;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	40472357	40473844	.	+	.	ID=Cattle_Y_G00666;Dbxref=GeneID:132344626;Name=LOC132344626;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344626;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00666;source_id=gene-LOC132344626
haplotype2-0000357	CAT	exon	40472357	40473844	.	+	.	ID=Cattle_Y_T01019;Parent=Cattle_Y_G00666;Dbxref=GeneID:132344626;gbkey=exon;gene=LOC132344626;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 61%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00666;transcript_id=Cattle_Y_T01019;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344626
haplotype2-0000357	CAT	gene	40483321	40486871	.	-	.	ID=Cattle_Y_G00667;Dbxref=GeneID:132344628;Name=LOC132344628;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344628;gene_biotype=protein_coding;gene_id=Cattle_Y_G00667;source_id=gene-LOC132344628
haplotype2-0000357	CAT	mRNA	40483321	40486871	.	-	.	ID=Cattle_Y_T01020;Parent=Cattle_Y_G00667;Dbxref=GeneID:132344628,GenBank:XM_059884286.1;Name=XM_059884286.1;gbkey=mRNA;gene=LOC132344628;model_evidence=Supporting evidence includes similarity to: 6 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01020;gene_id=Cattle_Y_G00667;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884286.1
haplotype2-0000357	CAT	exon	40483321	40483398	.	-	.	ID=Cattle_Y_E01750;Parent=Cattle_Y_T01020;Dbxref=GeneID:132344628,GenBank:XM_059884286.1;gbkey=mRNA;gene=LOC132344628;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01020;gene_id=Cattle_Y_G00667;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884286.1-6
haplotype2-0000357	CAT	exon	40483515	40483660	.	-	.	ID=Cattle_Y_E01751;Parent=Cattle_Y_T01020;Dbxref=GeneID:132344628,GenBank:XM_059884286.1;gbkey=mRNA;gene=LOC132344628;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01020;gene_id=Cattle_Y_G00667;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884286.1-5
haplotype2-0000357	CAT	exon	40483755	40483860	.	-	.	ID=Cattle_Y_E01752;Parent=Cattle_Y_T01020;Dbxref=GeneID:132344628,GenBank:XM_059884286.1;gbkey=mRNA;gene=LOC132344628;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01020;gene_id=Cattle_Y_G00667;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884286.1-4
haplotype2-0000357	CAT	exon	40484049	40484126	.	-	.	ID=Cattle_Y_E01753;Parent=Cattle_Y_T01020;Dbxref=GeneID:132344628,GenBank:XM_059884286.1;gbkey=mRNA;gene=LOC132344628;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01020;gene_id=Cattle_Y_G00667;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884286.1-3
haplotype2-0000357	CAT	exon	40486197	40486633	.	-	.	ID=Cattle_Y_E01754;Parent=Cattle_Y_T01020;Dbxref=GeneID:132344628,GenBank:XM_059884286.1;gbkey=mRNA;gene=LOC132344628;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01020;gene_id=Cattle_Y_G00667;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884286.1-2
haplotype2-0000357	CAT	exon	40486685	40486871	.	-	.	ID=Cattle_Y_E01755;Parent=Cattle_Y_T01020;Dbxref=GeneID:132344628,GenBank:XM_059884286.1;gbkey=mRNA;gene=LOC132344628;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01020;gene_id=Cattle_Y_G00667;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884286.1-1
haplotype2-0000357	CAT	CDS	40483321	40483398	.	-	0	ID=Cattle_Y_C01395;Parent=Cattle_Y_T01020;Dbxref=GeneID:132344628,GenBank:XP_059740269.1;Name=XP_059740269.1;gbkey=CDS;gene=LOC132344628;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740269.1;gene_id=Cattle_Y_G00667;transcript_id=Cattle_Y_T01020;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40483515	40483660	.	-	2	ID=Cattle_Y_C01396;Parent=Cattle_Y_T01020;Dbxref=GeneID:132344628,GenBank:XP_059740269.1;Name=XP_059740269.1;gbkey=CDS;gene=LOC132344628;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740269.1;gene_id=Cattle_Y_G00667;transcript_id=Cattle_Y_T01020;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40483755	40483860	.	-	0	ID=Cattle_Y_C01397;Parent=Cattle_Y_T01020;Dbxref=GeneID:132344628,GenBank:XP_059740269.1;Name=XP_059740269.1;gbkey=CDS;gene=LOC132344628;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740269.1;gene_id=Cattle_Y_G00667;transcript_id=Cattle_Y_T01020;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40484049	40484126	.	-	0	ID=Cattle_Y_C01398;Parent=Cattle_Y_T01020;Dbxref=GeneID:132344628,GenBank:XP_059740269.1;Name=XP_059740269.1;gbkey=CDS;gene=LOC132344628;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740269.1;gene_id=Cattle_Y_G00667;transcript_id=Cattle_Y_T01020;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40486197	40486633	.	-	2	ID=Cattle_Y_C01399;Parent=Cattle_Y_T01020;Dbxref=GeneID:132344628,GenBank:XP_059740269.1;Name=XP_059740269.1;gbkey=CDS;gene=LOC132344628;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740269.1;gene_id=Cattle_Y_G00667;transcript_id=Cattle_Y_T01020;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40486685	40486808	.	-	0	ID=Cattle_Y_C01400;Parent=Cattle_Y_T01020;Dbxref=GeneID:132344628,GenBank:XP_059740269.1;Name=XP_059740269.1;gbkey=CDS;gene=LOC132344628;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740269.1;gene_id=Cattle_Y_G00667;transcript_id=Cattle_Y_T01020;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	40503904	40507433	.	-	.	ID=Cattle_Y_G00668;Dbxref=GeneID:132344487;Name=LOC132344487;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344487;gene_biotype=protein_coding;gene_id=Cattle_Y_G00668;source_id=gene-LOC132344487
haplotype2-0000357	CAT	mRNA	40503904	40507433	.	-	.	ID=Cattle_Y_T01021;Parent=Cattle_Y_G00668;Dbxref=GeneID:132344487,GenBank:XM_059884100.1;Name=XM_059884100.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344487;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 6 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T01021;gene_id=Cattle_Y_G00668;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884100.1
haplotype2-0000357	CAT	exon	40503904	40504123	.	-	.	ID=Cattle_Y_E01756;Parent=Cattle_Y_T01021;Dbxref=GeneID:132344487,GenBank:XM_059884100.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01021;gene_id=Cattle_Y_G00668;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884100.1-6
haplotype2-0000357	CAT	exon	40505382	40505468	.	-	.	ID=Cattle_Y_E01757;Parent=Cattle_Y_T01021;Dbxref=GeneID:132344487,GenBank:XM_059884100.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01021;gene_id=Cattle_Y_G00668;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884100.1-6
haplotype2-0000357	CAT	exon	40505588	40505733	.	-	.	ID=Cattle_Y_E01758;Parent=Cattle_Y_T01021;Dbxref=GeneID:132344487,GenBank:XM_059884100.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01021;gene_id=Cattle_Y_G00668;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884100.1-6
haplotype2-0000357	CAT	exon	40505875	40505986	.	-	.	ID=Cattle_Y_E01759;Parent=Cattle_Y_T01021;Dbxref=GeneID:132344487,GenBank:XM_059884100.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01021;gene_id=Cattle_Y_G00668;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884100.1-6
haplotype2-0000357	CAT	exon	40506129	40506206	.	-	.	ID=Cattle_Y_E01760;Parent=Cattle_Y_T01021;Dbxref=GeneID:132344487,GenBank:XM_059884100.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01021;gene_id=Cattle_Y_G00668;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884100.1-6
haplotype2-0000357	CAT	exon	40506804	40507433	.	-	.	ID=Cattle_Y_E01761;Parent=Cattle_Y_T01021;Dbxref=GeneID:132344487,GenBank:XM_059884100.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01021;gene_id=Cattle_Y_G00668;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884100.1-1
haplotype2-0000357	CAT	CDS	40504100	40504123	.	-	0	ID=Cattle_Y_C01401;Parent=Cattle_Y_T01021;gene_id=Cattle_Y_G00668;transcript_id=Cattle_Y_T01021;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40505382	40505468	.	-	0	ID=Cattle_Y_C01402;Parent=Cattle_Y_T01021;gene_id=Cattle_Y_G00668;transcript_id=Cattle_Y_T01021;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40505588	40505733	.	-	2	ID=Cattle_Y_C01403;Parent=Cattle_Y_T01021;gene_id=Cattle_Y_G00668;transcript_id=Cattle_Y_T01021;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40505875	40505986	.	-	0	ID=Cattle_Y_C01404;Parent=Cattle_Y_T01021;gene_id=Cattle_Y_G00668;transcript_id=Cattle_Y_T01021;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40506129	40506206	.	-	0	ID=Cattle_Y_C01405;Parent=Cattle_Y_T01021;gene_id=Cattle_Y_G00668;transcript_id=Cattle_Y_T01021;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40506804	40507331	.	-	0	ID=Cattle_Y_C01406;Parent=Cattle_Y_T01021;gene_id=Cattle_Y_G00668;transcript_id=Cattle_Y_T01021;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	40503904	40507433	.	-	.	ID=Cattle_Y_T01022;Parent=Cattle_Y_G00668;Dbxref=GeneID:132344487,GenBank:XM_059884101.1;Name=XM_059884101.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344487;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T01022;gene_id=Cattle_Y_G00668;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884101.1
haplotype2-0000357	CAT	exon	40503904	40504123	.	-	.	ID=Cattle_Y_E01762;Parent=Cattle_Y_T01022;Dbxref=GeneID:132344487,GenBank:XM_059884101.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01022;gene_id=Cattle_Y_G00668;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884101.1-5
haplotype2-0000357	CAT	exon	40505382	40505468	.	-	.	ID=Cattle_Y_E01763;Parent=Cattle_Y_T01022;Dbxref=GeneID:132344487,GenBank:XM_059884101.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01022;gene_id=Cattle_Y_G00668;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884101.1-5
haplotype2-0000357	CAT	exon	40505588	40505733	.	-	.	ID=Cattle_Y_E01764;Parent=Cattle_Y_T01022;Dbxref=GeneID:132344487,GenBank:XM_059884101.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01022;gene_id=Cattle_Y_G00668;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884101.1-5
haplotype2-0000357	CAT	exon	40505875	40505986	.	-	.	ID=Cattle_Y_E01765;Parent=Cattle_Y_T01022;Dbxref=GeneID:132344487,GenBank:XM_059884101.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01022;gene_id=Cattle_Y_G00668;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884101.1-5
haplotype2-0000357	CAT	exon	40506783	40507433	.	-	.	ID=Cattle_Y_E01766;Parent=Cattle_Y_T01022;Dbxref=GeneID:132344487,GenBank:XM_059884101.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01022;gene_id=Cattle_Y_G00668;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884101.1-1
haplotype2-0000357	CAT	CDS	40504100	40504123	.	-	0	ID=Cattle_Y_C01407;Parent=Cattle_Y_T01022;gene_id=Cattle_Y_G00668;transcript_id=Cattle_Y_T01022;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40505382	40505468	.	-	0	ID=Cattle_Y_C01408;Parent=Cattle_Y_T01022;gene_id=Cattle_Y_G00668;transcript_id=Cattle_Y_T01022;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40505588	40505733	.	-	2	ID=Cattle_Y_C01409;Parent=Cattle_Y_T01022;gene_id=Cattle_Y_G00668;transcript_id=Cattle_Y_T01022;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40505875	40505986	.	-	0	ID=Cattle_Y_C01410;Parent=Cattle_Y_T01022;gene_id=Cattle_Y_G00668;transcript_id=Cattle_Y_T01022;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40506783	40507331	.	-	0	ID=Cattle_Y_C01411;Parent=Cattle_Y_T01022;gene_id=Cattle_Y_G00668;transcript_id=Cattle_Y_T01022;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	40519587	40523232	.	-	.	ID=Cattle_Y_G00669;Dbxref=GeneID:132344491;Name=LOC132344491;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344491;gene_biotype=protein_coding;gene_id=Cattle_Y_G00669;source_id=gene-LOC132344491
haplotype2-0000357	CAT	mRNA	40519587	40523232	.	-	.	ID=Cattle_Y_T01023;Parent=Cattle_Y_G00669;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;Name=XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;model_evidence=Supporting evidence includes similarity to: 2 mRNAs%2C 3 ESTs%2C 14 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T01023;gene_id=Cattle_Y_G00669;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884107.1
haplotype2-0000357	CAT	exon	40519587	40519805	.	-	.	ID=Cattle_Y_E01767;Parent=Cattle_Y_T01023;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01023;gene_id=Cattle_Y_G00669;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884107.1-6
haplotype2-0000357	CAT	exon	40521066	40521152	.	-	.	ID=Cattle_Y_E01768;Parent=Cattle_Y_T01023;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01023;gene_id=Cattle_Y_G00669;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884107.1-5
haplotype2-0000357	CAT	exon	40521272	40521417	.	-	.	ID=Cattle_Y_E01769;Parent=Cattle_Y_T01023;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01023;gene_id=Cattle_Y_G00669;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884107.1-4
haplotype2-0000357	CAT	exon	40521559	40521670	.	-	.	ID=Cattle_Y_E01770;Parent=Cattle_Y_T01023;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01023;gene_id=Cattle_Y_G00669;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884107.1-3
haplotype2-0000357	CAT	exon	40521813	40521890	.	-	.	ID=Cattle_Y_E01771;Parent=Cattle_Y_T01023;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01023;gene_id=Cattle_Y_G00669;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884107.1-2
haplotype2-0000357	CAT	exon	40522488	40523232	.	-	.	ID=Cattle_Y_E01772;Parent=Cattle_Y_T01023;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01023;gene_id=Cattle_Y_G00669;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884107.1-1
haplotype2-0000357	CAT	CDS	40519782	40519805	.	-	0	ID=Cattle_Y_C01412;Parent=Cattle_Y_T01023;Dbxref=GeneID:132344491,GenBank:XP_059740090.1;Name=XP_059740090.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740090.1_3;gene_id=Cattle_Y_G00669;transcript_id=Cattle_Y_T01023;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40521066	40521152	.	-	0	ID=Cattle_Y_C01413;Parent=Cattle_Y_T01023;Dbxref=GeneID:132344491,GenBank:XP_059740090.1;Name=XP_059740090.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740090.1_3;gene_id=Cattle_Y_G00669;transcript_id=Cattle_Y_T01023;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40521272	40521417	.	-	2	ID=Cattle_Y_C01414;Parent=Cattle_Y_T01023;Dbxref=GeneID:132344491,GenBank:XP_059740090.1;Name=XP_059740090.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740090.1_3;gene_id=Cattle_Y_G00669;transcript_id=Cattle_Y_T01023;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40521559	40521670	.	-	0	ID=Cattle_Y_C01415;Parent=Cattle_Y_T01023;Dbxref=GeneID:132344491,GenBank:XP_059740090.1;Name=XP_059740090.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740090.1_3;gene_id=Cattle_Y_G00669;transcript_id=Cattle_Y_T01023;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40521813	40521890	.	-	0	ID=Cattle_Y_C01416;Parent=Cattle_Y_T01023;Dbxref=GeneID:132344491,GenBank:XP_059740090.1;Name=XP_059740090.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740090.1_3;gene_id=Cattle_Y_G00669;transcript_id=Cattle_Y_T01023;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40522488	40523015	.	-	0	ID=Cattle_Y_C01417;Parent=Cattle_Y_T01023;Dbxref=GeneID:132344491,GenBank:XP_059740090.1;Name=XP_059740090.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740090.1_3;gene_id=Cattle_Y_G00669;transcript_id=Cattle_Y_T01023;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	40519587	40523232	.	-	.	ID=Cattle_Y_T01024;Parent=Cattle_Y_G00669;Dbxref=GeneID:132344491,GenBank:XM_059884108.1;Name=XM_059884108.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T01024;gene_id=Cattle_Y_G00669;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884108.1
haplotype2-0000357	CAT	exon	40519587	40519805	.	-	.	ID=Cattle_Y_E01773;Parent=Cattle_Y_T01024;Dbxref=GeneID:132344491,GenBank:XM_059884108.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01024;gene_id=Cattle_Y_G00669;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884108.1-5
haplotype2-0000357	CAT	exon	40521066	40521152	.	-	.	ID=Cattle_Y_E01774;Parent=Cattle_Y_T01024;Dbxref=GeneID:132344491,GenBank:XM_059884108.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01024;gene_id=Cattle_Y_G00669;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884108.1-4
haplotype2-0000357	CAT	exon	40521272	40521417	.	-	.	ID=Cattle_Y_E01775;Parent=Cattle_Y_T01024;Dbxref=GeneID:132344491,GenBank:XM_059884108.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01024;gene_id=Cattle_Y_G00669;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884108.1-3
haplotype2-0000357	CAT	exon	40521559	40521670	.	-	.	ID=Cattle_Y_E01776;Parent=Cattle_Y_T01024;Dbxref=GeneID:132344491,GenBank:XM_059884108.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01024;gene_id=Cattle_Y_G00669;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884108.1-2
haplotype2-0000357	CAT	exon	40522467	40523232	.	-	.	ID=Cattle_Y_E01777;Parent=Cattle_Y_T01024;Dbxref=GeneID:132344491,GenBank:XM_059884108.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01024;gene_id=Cattle_Y_G00669;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884108.1-1
haplotype2-0000357	CAT	CDS	40519782	40519805	.	-	0	ID=Cattle_Y_C01418;Parent=Cattle_Y_T01024;Dbxref=GeneID:132344491,GenBank:XP_059740091.1;Name=XP_059740091.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740091.1_3;gene_id=Cattle_Y_G00669;transcript_id=Cattle_Y_T01024;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40521066	40521152	.	-	0	ID=Cattle_Y_C01419;Parent=Cattle_Y_T01024;Dbxref=GeneID:132344491,GenBank:XP_059740091.1;Name=XP_059740091.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740091.1_3;gene_id=Cattle_Y_G00669;transcript_id=Cattle_Y_T01024;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40521272	40521417	.	-	2	ID=Cattle_Y_C01420;Parent=Cattle_Y_T01024;Dbxref=GeneID:132344491,GenBank:XP_059740091.1;Name=XP_059740091.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740091.1_3;gene_id=Cattle_Y_G00669;transcript_id=Cattle_Y_T01024;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40521559	40521670	.	-	0	ID=Cattle_Y_C01421;Parent=Cattle_Y_T01024;Dbxref=GeneID:132344491,GenBank:XP_059740091.1;Name=XP_059740091.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740091.1_3;gene_id=Cattle_Y_G00669;transcript_id=Cattle_Y_T01024;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40522467	40523015	.	-	0	ID=Cattle_Y_C01422;Parent=Cattle_Y_T01024;Dbxref=GeneID:132344491,GenBank:XP_059740091.1;Name=XP_059740091.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740091.1_3;gene_id=Cattle_Y_G00669;transcript_id=Cattle_Y_T01024;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	40535274	40538919	.	-	.	ID=Cattle_Y_G00670;Dbxref=GeneID:132344491;Name=LOC132344491;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344491;gene_biotype=protein_coding;gene_id=Cattle_Y_G00670;source_id=gene-LOC132344491
haplotype2-0000357	CAT	mRNA	40535274	40538919	.	-	.	ID=Cattle_Y_T01025;Parent=Cattle_Y_G00670;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;Name=XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;model_evidence=Supporting evidence includes similarity to: 2 mRNAs%2C 3 ESTs%2C 14 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T01025;gene_id=Cattle_Y_G00670;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884107.1
haplotype2-0000357	CAT	exon	40535274	40535492	.	-	.	ID=Cattle_Y_E01778;Parent=Cattle_Y_T01025;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01025;gene_id=Cattle_Y_G00670;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884107.1-6
haplotype2-0000357	CAT	exon	40536753	40536839	.	-	.	ID=Cattle_Y_E01779;Parent=Cattle_Y_T01025;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01025;gene_id=Cattle_Y_G00670;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884107.1-5
haplotype2-0000357	CAT	exon	40536959	40537104	.	-	.	ID=Cattle_Y_E01780;Parent=Cattle_Y_T01025;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01025;gene_id=Cattle_Y_G00670;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884107.1-4
haplotype2-0000357	CAT	exon	40537246	40537357	.	-	.	ID=Cattle_Y_E01781;Parent=Cattle_Y_T01025;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01025;gene_id=Cattle_Y_G00670;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884107.1-3
haplotype2-0000357	CAT	exon	40537500	40537577	.	-	.	ID=Cattle_Y_E01782;Parent=Cattle_Y_T01025;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01025;gene_id=Cattle_Y_G00670;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884107.1-2
haplotype2-0000357	CAT	exon	40538175	40538919	.	-	.	ID=Cattle_Y_E01783;Parent=Cattle_Y_T01025;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01025;gene_id=Cattle_Y_G00670;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884107.1-1
haplotype2-0000357	CAT	CDS	40535469	40535492	.	-	0	ID=Cattle_Y_C01423;Parent=Cattle_Y_T01025;Dbxref=GeneID:132344491,GenBank:XP_059740090.1;Name=XP_059740090.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740090.1_1;gene_id=Cattle_Y_G00670;transcript_id=Cattle_Y_T01025;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40536753	40536839	.	-	0	ID=Cattle_Y_C01424;Parent=Cattle_Y_T01025;Dbxref=GeneID:132344491,GenBank:XP_059740090.1;Name=XP_059740090.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740090.1_1;gene_id=Cattle_Y_G00670;transcript_id=Cattle_Y_T01025;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40536959	40537104	.	-	2	ID=Cattle_Y_C01425;Parent=Cattle_Y_T01025;Dbxref=GeneID:132344491,GenBank:XP_059740090.1;Name=XP_059740090.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740090.1_1;gene_id=Cattle_Y_G00670;transcript_id=Cattle_Y_T01025;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40537246	40537357	.	-	0	ID=Cattle_Y_C01426;Parent=Cattle_Y_T01025;Dbxref=GeneID:132344491,GenBank:XP_059740090.1;Name=XP_059740090.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740090.1_1;gene_id=Cattle_Y_G00670;transcript_id=Cattle_Y_T01025;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40537500	40537577	.	-	0	ID=Cattle_Y_C01427;Parent=Cattle_Y_T01025;Dbxref=GeneID:132344491,GenBank:XP_059740090.1;Name=XP_059740090.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740090.1_1;gene_id=Cattle_Y_G00670;transcript_id=Cattle_Y_T01025;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40538175	40538702	.	-	0	ID=Cattle_Y_C01428;Parent=Cattle_Y_T01025;Dbxref=GeneID:132344491,GenBank:XP_059740090.1;Name=XP_059740090.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740090.1_1;gene_id=Cattle_Y_G00670;transcript_id=Cattle_Y_T01025;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	40535274	40538919	.	-	.	ID=Cattle_Y_T01026;Parent=Cattle_Y_G00670;Dbxref=GeneID:132344491,GenBank:XM_059884108.1;Name=XM_059884108.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T01026;gene_id=Cattle_Y_G00670;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884108.1
haplotype2-0000357	CAT	exon	40535274	40535492	.	-	.	ID=Cattle_Y_E01784;Parent=Cattle_Y_T01026;Dbxref=GeneID:132344491,GenBank:XM_059884108.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01026;gene_id=Cattle_Y_G00670;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884108.1-5
haplotype2-0000357	CAT	exon	40536753	40536839	.	-	.	ID=Cattle_Y_E01785;Parent=Cattle_Y_T01026;Dbxref=GeneID:132344491,GenBank:XM_059884108.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01026;gene_id=Cattle_Y_G00670;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884108.1-4
haplotype2-0000357	CAT	exon	40536959	40537104	.	-	.	ID=Cattle_Y_E01786;Parent=Cattle_Y_T01026;Dbxref=GeneID:132344491,GenBank:XM_059884108.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01026;gene_id=Cattle_Y_G00670;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884108.1-3
haplotype2-0000357	CAT	exon	40537246	40537357	.	-	.	ID=Cattle_Y_E01787;Parent=Cattle_Y_T01026;Dbxref=GeneID:132344491,GenBank:XM_059884108.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01026;gene_id=Cattle_Y_G00670;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884108.1-2
haplotype2-0000357	CAT	exon	40538154	40538919	.	-	.	ID=Cattle_Y_E01788;Parent=Cattle_Y_T01026;Dbxref=GeneID:132344491,GenBank:XM_059884108.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01026;gene_id=Cattle_Y_G00670;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884108.1-1
haplotype2-0000357	CAT	CDS	40535469	40535492	.	-	0	ID=Cattle_Y_C01429;Parent=Cattle_Y_T01026;Dbxref=GeneID:132344491,GenBank:XP_059740091.1;Name=XP_059740091.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740091.1_1;gene_id=Cattle_Y_G00670;transcript_id=Cattle_Y_T01026;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40536753	40536839	.	-	0	ID=Cattle_Y_C01430;Parent=Cattle_Y_T01026;Dbxref=GeneID:132344491,GenBank:XP_059740091.1;Name=XP_059740091.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740091.1_1;gene_id=Cattle_Y_G00670;transcript_id=Cattle_Y_T01026;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40536959	40537104	.	-	2	ID=Cattle_Y_C01431;Parent=Cattle_Y_T01026;Dbxref=GeneID:132344491,GenBank:XP_059740091.1;Name=XP_059740091.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740091.1_1;gene_id=Cattle_Y_G00670;transcript_id=Cattle_Y_T01026;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40537246	40537357	.	-	0	ID=Cattle_Y_C01432;Parent=Cattle_Y_T01026;Dbxref=GeneID:132344491,GenBank:XP_059740091.1;Name=XP_059740091.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740091.1_1;gene_id=Cattle_Y_G00670;transcript_id=Cattle_Y_T01026;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40538154	40538702	.	-	0	ID=Cattle_Y_C01433;Parent=Cattle_Y_T01026;Dbxref=GeneID:132344491,GenBank:XP_059740091.1;Name=XP_059740091.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740091.1_1;gene_id=Cattle_Y_G00670;transcript_id=Cattle_Y_T01026;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	40550955	40554600	.	-	.	ID=Cattle_Y_G00671;Dbxref=GeneID:132344491;Name=LOC132344491;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344491;gene_biotype=protein_coding;gene_id=Cattle_Y_G00671;source_id=gene-LOC132344491
haplotype2-0000357	CAT	mRNA	40550955	40554600	.	-	.	ID=Cattle_Y_T01027;Parent=Cattle_Y_G00671;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;Name=XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;model_evidence=Supporting evidence includes similarity to: 2 mRNAs%2C 3 ESTs%2C 14 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T01027;gene_id=Cattle_Y_G00671;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884107.1
haplotype2-0000357	CAT	exon	40550955	40551173	.	-	.	ID=Cattle_Y_E01789;Parent=Cattle_Y_T01027;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01027;gene_id=Cattle_Y_G00671;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884107.1-6
haplotype2-0000357	CAT	exon	40552434	40552520	.	-	.	ID=Cattle_Y_E01790;Parent=Cattle_Y_T01027;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01027;gene_id=Cattle_Y_G00671;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884107.1-5
haplotype2-0000357	CAT	exon	40552640	40552785	.	-	.	ID=Cattle_Y_E01791;Parent=Cattle_Y_T01027;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01027;gene_id=Cattle_Y_G00671;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884107.1-4
haplotype2-0000357	CAT	exon	40552927	40553038	.	-	.	ID=Cattle_Y_E01792;Parent=Cattle_Y_T01027;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01027;gene_id=Cattle_Y_G00671;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884107.1-3
haplotype2-0000357	CAT	exon	40553181	40553258	.	-	.	ID=Cattle_Y_E01793;Parent=Cattle_Y_T01027;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01027;gene_id=Cattle_Y_G00671;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884107.1-2
haplotype2-0000357	CAT	exon	40553856	40554600	.	-	.	ID=Cattle_Y_E01794;Parent=Cattle_Y_T01027;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01027;gene_id=Cattle_Y_G00671;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884107.1-1
haplotype2-0000357	CAT	CDS	40551150	40551173	.	-	0	ID=Cattle_Y_C01434;Parent=Cattle_Y_T01027;Dbxref=GeneID:132344491,GenBank:XP_059740090.1;Name=XP_059740090.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740090.1_2;gene_id=Cattle_Y_G00671;transcript_id=Cattle_Y_T01027;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40552434	40552520	.	-	0	ID=Cattle_Y_C01435;Parent=Cattle_Y_T01027;Dbxref=GeneID:132344491,GenBank:XP_059740090.1;Name=XP_059740090.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740090.1_2;gene_id=Cattle_Y_G00671;transcript_id=Cattle_Y_T01027;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40552640	40552785	.	-	2	ID=Cattle_Y_C01436;Parent=Cattle_Y_T01027;Dbxref=GeneID:132344491,GenBank:XP_059740090.1;Name=XP_059740090.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740090.1_2;gene_id=Cattle_Y_G00671;transcript_id=Cattle_Y_T01027;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40552927	40553038	.	-	0	ID=Cattle_Y_C01437;Parent=Cattle_Y_T01027;Dbxref=GeneID:132344491,GenBank:XP_059740090.1;Name=XP_059740090.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740090.1_2;gene_id=Cattle_Y_G00671;transcript_id=Cattle_Y_T01027;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40553181	40553258	.	-	0	ID=Cattle_Y_C01438;Parent=Cattle_Y_T01027;Dbxref=GeneID:132344491,GenBank:XP_059740090.1;Name=XP_059740090.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740090.1_2;gene_id=Cattle_Y_G00671;transcript_id=Cattle_Y_T01027;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40553856	40554383	.	-	0	ID=Cattle_Y_C01439;Parent=Cattle_Y_T01027;Dbxref=GeneID:132344491,GenBank:XP_059740090.1;Name=XP_059740090.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740090.1_2;gene_id=Cattle_Y_G00671;transcript_id=Cattle_Y_T01027;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	40550955	40554600	.	-	.	ID=Cattle_Y_T01028;Parent=Cattle_Y_G00671;Dbxref=GeneID:132344491,GenBank:XM_059884108.1;Name=XM_059884108.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T01028;gene_id=Cattle_Y_G00671;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884108.1
haplotype2-0000357	CAT	exon	40550955	40551173	.	-	.	ID=Cattle_Y_E01795;Parent=Cattle_Y_T01028;Dbxref=GeneID:132344491,GenBank:XM_059884108.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01028;gene_id=Cattle_Y_G00671;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884108.1-5
haplotype2-0000357	CAT	exon	40552434	40552520	.	-	.	ID=Cattle_Y_E01796;Parent=Cattle_Y_T01028;Dbxref=GeneID:132344491,GenBank:XM_059884108.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01028;gene_id=Cattle_Y_G00671;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884108.1-4
haplotype2-0000357	CAT	exon	40552640	40552785	.	-	.	ID=Cattle_Y_E01797;Parent=Cattle_Y_T01028;Dbxref=GeneID:132344491,GenBank:XM_059884108.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01028;gene_id=Cattle_Y_G00671;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884108.1-3
haplotype2-0000357	CAT	exon	40552927	40553038	.	-	.	ID=Cattle_Y_E01798;Parent=Cattle_Y_T01028;Dbxref=GeneID:132344491,GenBank:XM_059884108.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01028;gene_id=Cattle_Y_G00671;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884108.1-2
haplotype2-0000357	CAT	exon	40553835	40554600	.	-	.	ID=Cattle_Y_E01799;Parent=Cattle_Y_T01028;Dbxref=GeneID:132344491,GenBank:XM_059884108.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01028;gene_id=Cattle_Y_G00671;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884108.1-1
haplotype2-0000357	CAT	CDS	40551150	40551173	.	-	0	ID=Cattle_Y_C01440;Parent=Cattle_Y_T01028;Dbxref=GeneID:132344491,GenBank:XP_059740091.1;Name=XP_059740091.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740091.1_2;gene_id=Cattle_Y_G00671;transcript_id=Cattle_Y_T01028;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40552434	40552520	.	-	0	ID=Cattle_Y_C01441;Parent=Cattle_Y_T01028;Dbxref=GeneID:132344491,GenBank:XP_059740091.1;Name=XP_059740091.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740091.1_2;gene_id=Cattle_Y_G00671;transcript_id=Cattle_Y_T01028;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40552640	40552785	.	-	2	ID=Cattle_Y_C01442;Parent=Cattle_Y_T01028;Dbxref=GeneID:132344491,GenBank:XP_059740091.1;Name=XP_059740091.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740091.1_2;gene_id=Cattle_Y_G00671;transcript_id=Cattle_Y_T01028;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40552927	40553038	.	-	0	ID=Cattle_Y_C01443;Parent=Cattle_Y_T01028;Dbxref=GeneID:132344491,GenBank:XP_059740091.1;Name=XP_059740091.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740091.1_2;gene_id=Cattle_Y_G00671;transcript_id=Cattle_Y_T01028;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	40553835	40554383	.	-	0	ID=Cattle_Y_C01444;Parent=Cattle_Y_T01028;Dbxref=GeneID:132344491,GenBank:XP_059740091.1;Name=XP_059740091.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740091.1_2;gene_id=Cattle_Y_G00671;transcript_id=Cattle_Y_T01028;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	41023799	41027448	.	-	.	ID=Cattle_Y_G00672;Dbxref=GeneID:132344508;Name=LOC132344508;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344508;gene_biotype=protein_coding;gene_id=Cattle_Y_G00672;source_id=gene-LOC132344508
haplotype2-0000357	CAT	mRNA	41023799	41027448	.	-	.	ID=Cattle_Y_T01029;Parent=Cattle_Y_G00672;Dbxref=GeneID:132344508,GenBank:XM_059884139.1;Name=XM_059884139.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344508;model_evidence=Supporting evidence includes similarity to: 3 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01029;gene_id=Cattle_Y_G00672;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884139.1
haplotype2-0000357	CAT	exon	41023799	41024018	.	-	.	ID=Cattle_Y_E01800;Parent=Cattle_Y_T01029;Dbxref=GeneID:132344508,GenBank:XM_059884139.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344508;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01029;gene_id=Cattle_Y_G00672;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884139.1-6
haplotype2-0000357	CAT	exon	41025277	41025363	.	-	.	ID=Cattle_Y_E01801;Parent=Cattle_Y_T01029;Dbxref=GeneID:132344508,GenBank:XM_059884139.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344508;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01029;gene_id=Cattle_Y_G00672;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884139.1-5
haplotype2-0000357	CAT	exon	41025483	41025628	.	-	.	ID=Cattle_Y_E01802;Parent=Cattle_Y_T01029;Dbxref=GeneID:132344508,GenBank:XM_059884139.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344508;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01029;gene_id=Cattle_Y_G00672;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884139.1-4
haplotype2-0000357	CAT	exon	41025770	41025881	.	-	.	ID=Cattle_Y_E01803;Parent=Cattle_Y_T01029;Dbxref=GeneID:132344508,GenBank:XM_059884139.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344508;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01029;gene_id=Cattle_Y_G00672;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884139.1-3
haplotype2-0000357	CAT	exon	41026024	41026101	.	-	.	ID=Cattle_Y_E01804;Parent=Cattle_Y_T01029;Dbxref=GeneID:132344508,GenBank:XM_059884139.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344508;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01029;gene_id=Cattle_Y_G00672;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884139.1-2
haplotype2-0000357	CAT	exon	41026695	41027448	.	-	.	ID=Cattle_Y_E01805;Parent=Cattle_Y_T01029;Dbxref=GeneID:132344508,GenBank:XM_059884139.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344508;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01029;gene_id=Cattle_Y_G00672;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884139.1-1
haplotype2-0000357	CAT	CDS	41023995	41024018	.	-	0	ID=Cattle_Y_C01445;Parent=Cattle_Y_T01029;Dbxref=GeneID:132344508,GenBank:XP_059740122.1;Name=XP_059740122.1;gbkey=CDS;gene=LOC132344508;product=testis-specific Y-encoded protein 3-like;protein_id=XP_059740122.1;gene_id=Cattle_Y_G00672;transcript_id=Cattle_Y_T01029;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41025277	41025363	.	-	0	ID=Cattle_Y_C01446;Parent=Cattle_Y_T01029;Dbxref=GeneID:132344508,GenBank:XP_059740122.1;Name=XP_059740122.1;gbkey=CDS;gene=LOC132344508;product=testis-specific Y-encoded protein 3-like;protein_id=XP_059740122.1;gene_id=Cattle_Y_G00672;transcript_id=Cattle_Y_T01029;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41025483	41025628	.	-	2	ID=Cattle_Y_C01447;Parent=Cattle_Y_T01029;Dbxref=GeneID:132344508,GenBank:XP_059740122.1;Name=XP_059740122.1;gbkey=CDS;gene=LOC132344508;product=testis-specific Y-encoded protein 3-like;protein_id=XP_059740122.1;gene_id=Cattle_Y_G00672;transcript_id=Cattle_Y_T01029;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41025770	41025881	.	-	0	ID=Cattle_Y_C01448;Parent=Cattle_Y_T01029;Dbxref=GeneID:132344508,GenBank:XP_059740122.1;Name=XP_059740122.1;gbkey=CDS;gene=LOC132344508;product=testis-specific Y-encoded protein 3-like;protein_id=XP_059740122.1;gene_id=Cattle_Y_G00672;transcript_id=Cattle_Y_T01029;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41026024	41026101	.	-	0	ID=Cattle_Y_C01449;Parent=Cattle_Y_T01029;Dbxref=GeneID:132344508,GenBank:XP_059740122.1;Name=XP_059740122.1;gbkey=CDS;gene=LOC132344508;product=testis-specific Y-encoded protein 3-like;protein_id=XP_059740122.1;gene_id=Cattle_Y_G00672;transcript_id=Cattle_Y_T01029;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41026695	41027222	.	-	0	ID=Cattle_Y_C01450;Parent=Cattle_Y_T01029;Dbxref=GeneID:132344508,GenBank:XP_059740122.1;Name=XP_059740122.1;gbkey=CDS;gene=LOC132344508;product=testis-specific Y-encoded protein 3-like;protein_id=XP_059740122.1;gene_id=Cattle_Y_G00672;transcript_id=Cattle_Y_T01029;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	41039503	41043138	.	-	.	ID=Cattle_Y_G00673;Dbxref=GeneID:132344513;Name=LOC132344513;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344513;gene_biotype=protein_coding;gene_id=Cattle_Y_G00673;source_id=gene-LOC132344513
haplotype2-0000357	CAT	mRNA	41039503	41043137	.	-	.	ID=Cattle_Y_T01030;Parent=Cattle_Y_G00673;Dbxref=GeneID:132344513,GenBank:XM_059884146.1;Name=XM_059884146.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344513;model_evidence=Supporting evidence includes similarity to: 2 ESTs%2C 7 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T01030;gene_id=Cattle_Y_G00673;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884146.1
haplotype2-0000357	CAT	exon	41039503	41039722	.	-	.	ID=Cattle_Y_E01806;Parent=Cattle_Y_T01030;Dbxref=GeneID:132344513,GenBank:XM_059884146.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01030;gene_id=Cattle_Y_G00673;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884146.1-6
haplotype2-0000357	CAT	exon	41040981	41041067	.	-	.	ID=Cattle_Y_E01807;Parent=Cattle_Y_T01030;Dbxref=GeneID:132344513,GenBank:XM_059884146.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01030;gene_id=Cattle_Y_G00673;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884146.1-5
haplotype2-0000357	CAT	exon	41041187	41041332	.	-	.	ID=Cattle_Y_E01808;Parent=Cattle_Y_T01030;Dbxref=GeneID:132344513,GenBank:XM_059884146.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01030;gene_id=Cattle_Y_G00673;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884146.1-4
haplotype2-0000357	CAT	exon	41041474	41041585	.	-	.	ID=Cattle_Y_E01809;Parent=Cattle_Y_T01030;Dbxref=GeneID:132344513,GenBank:XM_059884146.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01030;gene_id=Cattle_Y_G00673;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884146.1-3
haplotype2-0000357	CAT	exon	41041728	41041805	.	-	.	ID=Cattle_Y_E01810;Parent=Cattle_Y_T01030;Dbxref=GeneID:132344513,GenBank:XM_059884146.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01030;gene_id=Cattle_Y_G00673;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884146.1-2
haplotype2-0000357	CAT	exon	41042399	41043137	.	-	.	ID=Cattle_Y_E01811;Parent=Cattle_Y_T01030;Dbxref=GeneID:132344513,GenBank:XM_059884146.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01030;gene_id=Cattle_Y_G00673;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884146.1-1
haplotype2-0000357	CAT	CDS	41039699	41039722	.	-	0	ID=Cattle_Y_C01451;Parent=Cattle_Y_T01030;Dbxref=GeneID:132344513,GenBank:XP_059740129.1;Name=XP_059740129.1;gbkey=CDS;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740129.1;gene_id=Cattle_Y_G00673;transcript_id=Cattle_Y_T01030;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41040981	41041067	.	-	0	ID=Cattle_Y_C01452;Parent=Cattle_Y_T01030;Dbxref=GeneID:132344513,GenBank:XP_059740129.1;Name=XP_059740129.1;gbkey=CDS;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740129.1;gene_id=Cattle_Y_G00673;transcript_id=Cattle_Y_T01030;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41041187	41041332	.	-	2	ID=Cattle_Y_C01453;Parent=Cattle_Y_T01030;Dbxref=GeneID:132344513,GenBank:XP_059740129.1;Name=XP_059740129.1;gbkey=CDS;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740129.1;gene_id=Cattle_Y_G00673;transcript_id=Cattle_Y_T01030;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41041474	41041585	.	-	0	ID=Cattle_Y_C01454;Parent=Cattle_Y_T01030;Dbxref=GeneID:132344513,GenBank:XP_059740129.1;Name=XP_059740129.1;gbkey=CDS;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740129.1;gene_id=Cattle_Y_G00673;transcript_id=Cattle_Y_T01030;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41041728	41041805	.	-	0	ID=Cattle_Y_C01455;Parent=Cattle_Y_T01030;Dbxref=GeneID:132344513,GenBank:XP_059740129.1;Name=XP_059740129.1;gbkey=CDS;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740129.1;gene_id=Cattle_Y_G00673;transcript_id=Cattle_Y_T01030;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41042399	41042926	.	-	0	ID=Cattle_Y_C01456;Parent=Cattle_Y_T01030;Dbxref=GeneID:132344513,GenBank:XP_059740129.1;Name=XP_059740129.1;gbkey=CDS;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740129.1;gene_id=Cattle_Y_G00673;transcript_id=Cattle_Y_T01030;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	41039503	41043138	.	-	.	ID=Cattle_Y_T01031;Parent=Cattle_Y_G00673;Dbxref=GeneID:132344513,GenBank:XM_059884147.1;Name=XM_059884147.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344513;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T01031;gene_id=Cattle_Y_G00673;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884147.1
haplotype2-0000357	CAT	exon	41039503	41039722	.	-	.	ID=Cattle_Y_E01812;Parent=Cattle_Y_T01031;Dbxref=GeneID:132344513,GenBank:XM_059884147.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01031;gene_id=Cattle_Y_G00673;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884147.1-5
haplotype2-0000357	CAT	exon	41040981	41041067	.	-	.	ID=Cattle_Y_E01813;Parent=Cattle_Y_T01031;Dbxref=GeneID:132344513,GenBank:XM_059884147.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01031;gene_id=Cattle_Y_G00673;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884147.1-4
haplotype2-0000357	CAT	exon	41041187	41041332	.	-	.	ID=Cattle_Y_E01814;Parent=Cattle_Y_T01031;Dbxref=GeneID:132344513,GenBank:XM_059884147.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01031;gene_id=Cattle_Y_G00673;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884147.1-3
haplotype2-0000357	CAT	exon	41041474	41041585	.	-	.	ID=Cattle_Y_E01815;Parent=Cattle_Y_T01031;Dbxref=GeneID:132344513,GenBank:XM_059884147.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01031;gene_id=Cattle_Y_G00673;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884147.1-2
haplotype2-0000357	CAT	exon	41042378	41043138	.	-	.	ID=Cattle_Y_E01816;Parent=Cattle_Y_T01031;Dbxref=GeneID:132344513,GenBank:XM_059884147.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01031;gene_id=Cattle_Y_G00673;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884147.1-1
haplotype2-0000357	CAT	CDS	41039699	41039722	.	-	0	ID=Cattle_Y_C01457;Parent=Cattle_Y_T01031;Dbxref=GeneID:132344513,GenBank:XP_059740130.1;Name=XP_059740130.1;gbkey=CDS;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740130.1;gene_id=Cattle_Y_G00673;transcript_id=Cattle_Y_T01031;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41040981	41041067	.	-	0	ID=Cattle_Y_C01458;Parent=Cattle_Y_T01031;Dbxref=GeneID:132344513,GenBank:XP_059740130.1;Name=XP_059740130.1;gbkey=CDS;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740130.1;gene_id=Cattle_Y_G00673;transcript_id=Cattle_Y_T01031;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41041187	41041332	.	-	2	ID=Cattle_Y_C01459;Parent=Cattle_Y_T01031;Dbxref=GeneID:132344513,GenBank:XP_059740130.1;Name=XP_059740130.1;gbkey=CDS;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740130.1;gene_id=Cattle_Y_G00673;transcript_id=Cattle_Y_T01031;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41041474	41041585	.	-	0	ID=Cattle_Y_C01460;Parent=Cattle_Y_T01031;Dbxref=GeneID:132344513,GenBank:XP_059740130.1;Name=XP_059740130.1;gbkey=CDS;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740130.1;gene_id=Cattle_Y_G00673;transcript_id=Cattle_Y_T01031;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41042378	41042926	.	-	0	ID=Cattle_Y_C01461;Parent=Cattle_Y_T01031;Dbxref=GeneID:132344513,GenBank:XP_059740130.1;Name=XP_059740130.1;gbkey=CDS;gene=LOC132344513;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740130.1;gene_id=Cattle_Y_G00673;transcript_id=Cattle_Y_T01031;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	41055197	41058836	.	-	.	ID=Cattle_Y_G00674;Dbxref=GeneID:132344510;Name=LOC132344510;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344510;gene_biotype=protein_coding;gene_id=Cattle_Y_G00674;source_id=gene-LOC132344510
haplotype2-0000357	CAT	mRNA	41055197	41058836	.	-	.	ID=Cattle_Y_T01032;Parent=Cattle_Y_G00674;Dbxref=GeneID:132344510,GenBank:XM_059884142.1;Name=XM_059884142.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344510;model_evidence=Supporting evidence includes similarity to: 5 Proteins%2C and 99%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01032;gene_id=Cattle_Y_G00674;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884142.1
haplotype2-0000357	CAT	exon	41055197	41055416	.	-	.	ID=Cattle_Y_E01817;Parent=Cattle_Y_T01032;Dbxref=GeneID:132344510,GenBank:XM_059884142.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344510;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01032;gene_id=Cattle_Y_G00674;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884142.1-6
haplotype2-0000357	CAT	exon	41056676	41056762	.	-	.	ID=Cattle_Y_E01818;Parent=Cattle_Y_T01032;Dbxref=GeneID:132344510,GenBank:XM_059884142.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344510;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01032;gene_id=Cattle_Y_G00674;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884142.1-6
haplotype2-0000357	CAT	exon	41056882	41057027	.	-	.	ID=Cattle_Y_E01819;Parent=Cattle_Y_T01032;Dbxref=GeneID:132344510,GenBank:XM_059884142.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344510;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01032;gene_id=Cattle_Y_G00674;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884142.1-6
haplotype2-0000357	CAT	exon	41057169	41057280	.	-	.	ID=Cattle_Y_E01820;Parent=Cattle_Y_T01032;Dbxref=GeneID:132344510,GenBank:XM_059884142.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344510;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01032;gene_id=Cattle_Y_G00674;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884142.1-6
haplotype2-0000357	CAT	exon	41057423	41057500	.	-	.	ID=Cattle_Y_E01821;Parent=Cattle_Y_T01032;Dbxref=GeneID:132344510,GenBank:XM_059884142.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344510;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01032;gene_id=Cattle_Y_G00674;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884142.1-6
haplotype2-0000357	CAT	exon	41058094	41058836	.	-	.	ID=Cattle_Y_E01822;Parent=Cattle_Y_T01032;Dbxref=GeneID:132344510,GenBank:XM_059884142.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344510;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01032;gene_id=Cattle_Y_G00674;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884142.1-1
haplotype2-0000357	CAT	CDS	41055393	41055416	.	-	0	ID=Cattle_Y_C01462;Parent=Cattle_Y_T01032;gene_id=Cattle_Y_G00674;transcript_id=Cattle_Y_T01032;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41056676	41056762	.	-	0	ID=Cattle_Y_C01463;Parent=Cattle_Y_T01032;gene_id=Cattle_Y_G00674;transcript_id=Cattle_Y_T01032;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41056882	41057027	.	-	2	ID=Cattle_Y_C01464;Parent=Cattle_Y_T01032;gene_id=Cattle_Y_G00674;transcript_id=Cattle_Y_T01032;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41057169	41057280	.	-	0	ID=Cattle_Y_C01465;Parent=Cattle_Y_T01032;gene_id=Cattle_Y_G00674;transcript_id=Cattle_Y_T01032;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41057423	41057500	.	-	0	ID=Cattle_Y_C01466;Parent=Cattle_Y_T01032;gene_id=Cattle_Y_G00674;transcript_id=Cattle_Y_T01032;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41058094	41058621	.	-	0	ID=Cattle_Y_C01467;Parent=Cattle_Y_T01032;gene_id=Cattle_Y_G00674;transcript_id=Cattle_Y_T01032;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	41657289	41660852	.	+	.	ID=Cattle_Y_G00675;Dbxref=GeneID:132344647;Name=LOC132344647;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344647;gene_biotype=protein_coding;gene_id=Cattle_Y_G00675;source_id=gene-LOC132344647
haplotype2-0000357	CAT	mRNA	41657289	41660852	.	+	.	ID=Cattle_Y_T01033;Parent=Cattle_Y_G00675;Dbxref=GeneID:132344647,GenBank:XM_059884297.1;Name=XM_059884297.1;gbkey=mRNA;gene=LOC132344647;model_evidence=Supporting evidence includes similarity to: 6 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01033;gene_id=Cattle_Y_G00675;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884297.1
haplotype2-0000357	CAT	exon	41657289	41657475	.	+	.	ID=Cattle_Y_E01823;Parent=Cattle_Y_T01033;Dbxref=GeneID:132344647,GenBank:XM_059884297.1;gbkey=mRNA;gene=LOC132344647;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01033;gene_id=Cattle_Y_G00675;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884297.1-1
haplotype2-0000357	CAT	exon	41657527	41657963	.	+	.	ID=Cattle_Y_E01824;Parent=Cattle_Y_T01033;Dbxref=GeneID:132344647,GenBank:XM_059884297.1;gbkey=mRNA;gene=LOC132344647;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01033;gene_id=Cattle_Y_G00675;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884297.1-1
haplotype2-0000357	CAT	exon	41660047	41660124	.	+	.	ID=Cattle_Y_E01825;Parent=Cattle_Y_T01033;Dbxref=GeneID:132344647,GenBank:XM_059884297.1;gbkey=mRNA;gene=LOC132344647;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01033;gene_id=Cattle_Y_G00675;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884297.1-1
haplotype2-0000357	CAT	exon	41660313	41660418	.	+	.	ID=Cattle_Y_E01826;Parent=Cattle_Y_T01033;Dbxref=GeneID:132344647,GenBank:XM_059884297.1;gbkey=mRNA;gene=LOC132344647;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01033;gene_id=Cattle_Y_G00675;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884297.1-1
haplotype2-0000357	CAT	exon	41660513	41660658	.	+	.	ID=Cattle_Y_E01827;Parent=Cattle_Y_T01033;Dbxref=GeneID:132344647,GenBank:XM_059884297.1;gbkey=mRNA;gene=LOC132344647;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01033;gene_id=Cattle_Y_G00675;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884297.1-1
haplotype2-0000357	CAT	exon	41660775	41660852	.	+	.	ID=Cattle_Y_E01828;Parent=Cattle_Y_T01033;Dbxref=GeneID:132344647,GenBank:XM_059884297.1;gbkey=mRNA;gene=LOC132344647;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01033;gene_id=Cattle_Y_G00675;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884297.1-6
haplotype2-0000357	CAT	CDS	41657352	41657475	.	+	0	ID=Cattle_Y_C01468;Parent=Cattle_Y_T01033;gene_id=Cattle_Y_G00675;transcript_id=Cattle_Y_T01033;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41657527	41657963	.	+	2	ID=Cattle_Y_C01469;Parent=Cattle_Y_T01033;gene_id=Cattle_Y_G00675;transcript_id=Cattle_Y_T01033;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41660047	41660124	.	+	0	ID=Cattle_Y_C01470;Parent=Cattle_Y_T01033;gene_id=Cattle_Y_G00675;transcript_id=Cattle_Y_T01033;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41660313	41660418	.	+	0	ID=Cattle_Y_C01471;Parent=Cattle_Y_T01033;gene_id=Cattle_Y_G00675;transcript_id=Cattle_Y_T01033;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41660513	41660658	.	+	2	ID=Cattle_Y_C01472;Parent=Cattle_Y_T01033;gene_id=Cattle_Y_G00675;transcript_id=Cattle_Y_T01033;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41660775	41660852	.	+	0	ID=Cattle_Y_C01473;Parent=Cattle_Y_T01033;gene_id=Cattle_Y_G00675;transcript_id=Cattle_Y_T01033;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	41670327	41671793	.	-	.	ID=Cattle_Y_G00676;Dbxref=GeneID:132344648;Name=LOC132344648;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344648;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00676;source_id=gene-LOC132344648
haplotype2-0000357	CAT	exon	41670327	41671793	.	-	.	ID=Cattle_Y_T01034;Parent=Cattle_Y_G00676;Dbxref=GeneID:132344648;gbkey=exon;gene=LOC132344648;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 43%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00676;transcript_id=Cattle_Y_T01034;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344648
haplotype2-0000357	CAT	gene	41718466	41723724	.	+	.	ID=Cattle_Y_G00677;Dbxref=GeneID:528601;Name=LOC528601;description=preferentially expressed antigen in melanoma;gbkey=Gene;gene=LOC528601;gene_biotype=protein_coding;gene_synonym=PRAME;gene_id=Cattle_Y_G00677;source_id=gene-LOC528601
haplotype2-0000357	CAT	mRNA	41718535	41723720	.	+	.	ID=Cattle_Y_T01035;Parent=Cattle_Y_G00677;Dbxref=GeneID:528601,GenBank:NM_001077979.2;Name=NM_001077979.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC528601;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001077979.2;product=preferentially expressed antigen in melanoma;transcript_id=Cattle_Y_T01035;gene_id=Cattle_Y_G00677;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001077979.2
haplotype2-0000357	CAT	exon	41718535	41718677	.	+	.	ID=Cattle_Y_E01829;Parent=Cattle_Y_T01035;Dbxref=GeneID:528601,GenBank:NM_001077979.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC528601;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001077979.2;product=preferentially expressed antigen in melanoma;transcript_id=Cattle_Y_T01035;gene_id=Cattle_Y_G00677;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001077979.2-1
haplotype2-0000357	CAT	exon	41719494	41719560	.	+	.	ID=Cattle_Y_E01830;Parent=Cattle_Y_T01035;Dbxref=GeneID:528601,GenBank:NM_001077979.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC528601;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001077979.2;product=preferentially expressed antigen in melanoma;transcript_id=Cattle_Y_T01035;gene_id=Cattle_Y_G00677;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001077979.2-2
haplotype2-0000357	CAT	exon	41720934	41721253	.	+	.	ID=Cattle_Y_E01831;Parent=Cattle_Y_T01035;Dbxref=GeneID:528601,GenBank:NM_001077979.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC528601;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001077979.2;product=preferentially expressed antigen in melanoma;transcript_id=Cattle_Y_T01035;gene_id=Cattle_Y_G00677;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001077979.2-3
haplotype2-0000357	CAT	exon	41721538	41722140	.	+	.	ID=Cattle_Y_E01832;Parent=Cattle_Y_T01035;Dbxref=GeneID:528601,GenBank:NM_001077979.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC528601;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001077979.2;product=preferentially expressed antigen in melanoma;transcript_id=Cattle_Y_T01035;gene_id=Cattle_Y_G00677;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001077979.2-4
haplotype2-0000357	CAT	exon	41722899	41723720	.	+	.	ID=Cattle_Y_E01833;Parent=Cattle_Y_T01035;Dbxref=GeneID:528601,GenBank:NM_001077979.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC528601;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001077979.2;product=preferentially expressed antigen in melanoma;transcript_id=Cattle_Y_T01035;gene_id=Cattle_Y_G00677;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001077979.2-5
haplotype2-0000357	CAT	CDS	41720961	41721253	.	+	0	ID=Cattle_Y_C01474;Parent=Cattle_Y_T01035;Dbxref=GeneID:528601,GenBank:NP_001071447.1;Name=NP_001071447.1;gbkey=CDS;gene=LOC528601;product=preferentially expressed antigen in melanoma;protein_id=NP_001071447.1;gene_id=Cattle_Y_G00677;transcript_id=Cattle_Y_T01035;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41721538	41722140	.	+	1	ID=Cattle_Y_C01475;Parent=Cattle_Y_T01035;Dbxref=GeneID:528601,GenBank:NP_001071447.1;Name=NP_001071447.1;gbkey=CDS;gene=LOC528601;product=preferentially expressed antigen in melanoma;protein_id=NP_001071447.1;gene_id=Cattle_Y_G00677;transcript_id=Cattle_Y_T01035;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41722899	41723475	.	+	1	ID=Cattle_Y_C01476;Parent=Cattle_Y_T01035;Dbxref=GeneID:528601,GenBank:NP_001071447.1;Name=NP_001071447.1;gbkey=CDS;gene=LOC528601;product=preferentially expressed antigen in melanoma;protein_id=NP_001071447.1;gene_id=Cattle_Y_G00677;transcript_id=Cattle_Y_T01035;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	41718466	41723724	.	+	.	ID=Cattle_Y_T01036;Parent=Cattle_Y_G00677;Dbxref=GeneID:528601,GenBank:XM_059883984.1;Name=XM_059883984.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC528601;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 13 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=preferentially expressed antigen in melanoma%2C transcript variant X1;transcript_id=Cattle_Y_T01036;gene_id=Cattle_Y_G00677;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883984.1
haplotype2-0000357	CAT	exon	41718466	41718677	.	+	.	ID=Cattle_Y_E01834;Parent=Cattle_Y_T01036;Dbxref=GeneID:528601,GenBank:XM_059883984.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC528601;product=preferentially expressed antigen in melanoma, transcript variant X1;transcript_id=Cattle_Y_T01036;gene_id=Cattle_Y_G00677;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883984.1-1
haplotype2-0000357	CAT	exon	41720934	41721253	.	+	.	ID=Cattle_Y_E01835;Parent=Cattle_Y_T01036;Dbxref=GeneID:528601,GenBank:XM_059883984.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC528601;product=preferentially expressed antigen in melanoma, transcript variant X1;transcript_id=Cattle_Y_T01036;gene_id=Cattle_Y_G00677;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883984.1-2
haplotype2-0000357	CAT	exon	41721538	41722140	.	+	.	ID=Cattle_Y_E01836;Parent=Cattle_Y_T01036;Dbxref=GeneID:528601,GenBank:XM_059883984.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC528601;product=preferentially expressed antigen in melanoma, transcript variant X1;transcript_id=Cattle_Y_T01036;gene_id=Cattle_Y_G00677;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883984.1-3
haplotype2-0000357	CAT	exon	41722899	41723724	.	+	.	ID=Cattle_Y_E01837;Parent=Cattle_Y_T01036;Dbxref=GeneID:528601,GenBank:XM_059883984.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC528601;product=preferentially expressed antigen in melanoma, transcript variant X1;transcript_id=Cattle_Y_T01036;gene_id=Cattle_Y_G00677;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883984.1-4
haplotype2-0000357	CAT	CDS	41720961	41721253	.	+	0	ID=Cattle_Y_C01477;Parent=Cattle_Y_T01036;Dbxref=GeneID:528601,GenBank:XP_059739967.1;Name=XP_059739967.1;gbkey=CDS;gene=LOC528601;product=preferentially expressed antigen in melanoma isoform X1;protein_id=XP_059739967.1;gene_id=Cattle_Y_G00677;transcript_id=Cattle_Y_T01036;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41721538	41722140	.	+	1	ID=Cattle_Y_C01478;Parent=Cattle_Y_T01036;Dbxref=GeneID:528601,GenBank:XP_059739967.1;Name=XP_059739967.1;gbkey=CDS;gene=LOC528601;product=preferentially expressed antigen in melanoma isoform X1;protein_id=XP_059739967.1;gene_id=Cattle_Y_G00677;transcript_id=Cattle_Y_T01036;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41722899	41723475	.	+	1	ID=Cattle_Y_C01479;Parent=Cattle_Y_T01036;Dbxref=GeneID:528601,GenBank:XP_059739967.1;Name=XP_059739967.1;gbkey=CDS;gene=LOC528601;product=preferentially expressed antigen in melanoma isoform X1;protein_id=XP_059739967.1;gene_id=Cattle_Y_G00677;transcript_id=Cattle_Y_T01036;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	41732103	41738347	.	-	.	ID=Cattle_Y_G00678;Dbxref=GeneID:132344451;Name=LOC132344451;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344451;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00678;source_id=gene-LOC132344451
haplotype2-0000357	CAT	exon	41732103	41732845	.	-	.	ID=Cattle_Y_T01037;Parent=Cattle_Y_G00678;Dbxref=GeneID:132344451;gbkey=exon;gene=LOC132344451;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00678;transcript_id=Cattle_Y_T01037;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344451-3
haplotype2-0000357	CAT	exon	41732890	41733255	.	-	.	ID=Cattle_Y_T01038;Parent=Cattle_Y_G00678;Dbxref=GeneID:132344451;gbkey=exon;gene=LOC132344451;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00678;transcript_id=Cattle_Y_T01038;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344451-2
haplotype2-0000357	CAT	exon	41738292	41738347	.	-	.	ID=Cattle_Y_T01039;Parent=Cattle_Y_G00678;Dbxref=GeneID:132344451;gbkey=exon;gene=LOC132344451;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00678;transcript_id=Cattle_Y_T01039;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344451
haplotype2-0000357	CAT	gene	41745296	41750553	.	-	.	ID=Cattle_Y_G00679;Dbxref=GeneID:132344506;Name=LOC132344506;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC132344506;gene_biotype=protein_coding;gene_id=Cattle_Y_G00679;source_id=gene-LOC132344506
haplotype2-0000357	CAT	mRNA	41745296	41750553	.	-	.	ID=Cattle_Y_T01040;Parent=Cattle_Y_G00679;Dbxref=GeneID:132344506,GenBank:XM_059884136.1;Name=XM_059884136.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344506;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 5 Proteins%2C and 98%25 coverage of the annotated genomic feature by RNAseq alignments;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01040;gene_id=Cattle_Y_G00679;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884136.1
haplotype2-0000357	CAT	exon	41745296	41746121	.	-	.	ID=Cattle_Y_E01838;Parent=Cattle_Y_T01040;Dbxref=GeneID:132344506,GenBank:XM_059884136.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344506;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01040;gene_id=Cattle_Y_G00679;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884136.1-5
haplotype2-0000357	CAT	exon	41746880	41747482	.	-	.	ID=Cattle_Y_E01839;Parent=Cattle_Y_T01040;Dbxref=GeneID:132344506,GenBank:XM_059884136.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344506;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01040;gene_id=Cattle_Y_G00679;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884136.1-5
haplotype2-0000357	CAT	exon	41747767	41748086	.	-	.	ID=Cattle_Y_E01840;Parent=Cattle_Y_T01040;Dbxref=GeneID:132344506,GenBank:XM_059884136.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344506;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01040;gene_id=Cattle_Y_G00679;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884136.1-5
haplotype2-0000357	CAT	exon	41749460	41749526	.	-	.	ID=Cattle_Y_E01841;Parent=Cattle_Y_T01040;Dbxref=GeneID:132344506,GenBank:XM_059884136.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344506;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01040;gene_id=Cattle_Y_G00679;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884136.1-2
haplotype2-0000357	CAT	exon	41750343	41750553	.	-	.	ID=Cattle_Y_E01842;Parent=Cattle_Y_T01040;Dbxref=GeneID:132344506,GenBank:XM_059884136.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344506;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01040;gene_id=Cattle_Y_G00679;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884136.1-1
haplotype2-0000357	CAT	CDS	41745545	41746121	.	-	1	ID=Cattle_Y_C01480;Parent=Cattle_Y_T01040;gene_id=Cattle_Y_G00679;transcript_id=Cattle_Y_T01040;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41746880	41747482	.	-	1	ID=Cattle_Y_C01481;Parent=Cattle_Y_T01040;gene_id=Cattle_Y_G00679;transcript_id=Cattle_Y_T01040;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41747767	41748086	.	-	0	ID=Cattle_Y_C01482;Parent=Cattle_Y_T01040;gene_id=Cattle_Y_G00679;transcript_id=Cattle_Y_T01040;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41749460	41749495	.	-	0	ID=Cattle_Y_C01483;Parent=Cattle_Y_T01040;gene_id=Cattle_Y_G00679;transcript_id=Cattle_Y_T01040;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	41797241	41806860	.	+	.	ID=Cattle_Y_G00680;Dbxref=GeneID:132344443;Name=LOC132344443;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344443;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00680;source_id=gene-LOC132344443
haplotype2-0000357	CAT	exon	41797241	41798489	.	+	.	ID=Cattle_Y_T01041;Parent=Cattle_Y_G00680;Dbxref=GeneID:132344443;gbkey=exon;gene=LOC132344443;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 74%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00680;transcript_id=Cattle_Y_T01041;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344443
haplotype2-0000357	CAT	exon	41805508	41805671	.	+	.	ID=Cattle_Y_T01042;Parent=Cattle_Y_G00680;Dbxref=GeneID:132344443;gbkey=exon;gene=LOC132344443;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 74%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00680;transcript_id=Cattle_Y_T01042;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344443-2
haplotype2-0000357	CAT	exon	41806723	41806860	.	+	.	ID=Cattle_Y_T01043;Parent=Cattle_Y_G00680;Dbxref=GeneID:132344443;gbkey=exon;gene=LOC132344443;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 74%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00680;transcript_id=Cattle_Y_T01043;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344443-3
haplotype2-0000357	CAT	gene	41807879	41811425	.	-	.	ID=Cattle_Y_G00681;Dbxref=GeneID:132344629;Name=LOC132344629;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344629;gene_biotype=protein_coding;gene_id=Cattle_Y_G00681;source_id=gene-LOC132344629
haplotype2-0000357	CAT	mRNA	41807879	41811425	.	-	.	ID=Cattle_Y_T01044;Parent=Cattle_Y_G00681;Dbxref=GeneID:132344629,GenBank:XM_059884287.1;Name=XM_059884287.1;gbkey=mRNA;gene=LOC132344629;model_evidence=Supporting evidence includes similarity to: 6 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01044;gene_id=Cattle_Y_G00681;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884287.1
haplotype2-0000357	CAT	exon	41807879	41807956	.	-	.	ID=Cattle_Y_E01843;Parent=Cattle_Y_T01044;Dbxref=GeneID:132344629,GenBank:XM_059884287.1;gbkey=mRNA;gene=LOC132344629;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01044;gene_id=Cattle_Y_G00681;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884287.1-6
haplotype2-0000357	CAT	exon	41808073	41808218	.	-	.	ID=Cattle_Y_E01844;Parent=Cattle_Y_T01044;Dbxref=GeneID:132344629,GenBank:XM_059884287.1;gbkey=mRNA;gene=LOC132344629;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01044;gene_id=Cattle_Y_G00681;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884287.1-5
haplotype2-0000357	CAT	exon	41808313	41808418	.	-	.	ID=Cattle_Y_E01845;Parent=Cattle_Y_T01044;Dbxref=GeneID:132344629,GenBank:XM_059884287.1;gbkey=mRNA;gene=LOC132344629;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01044;gene_id=Cattle_Y_G00681;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884287.1-4
haplotype2-0000357	CAT	exon	41808607	41808684	.	-	.	ID=Cattle_Y_E01846;Parent=Cattle_Y_T01044;Dbxref=GeneID:132344629,GenBank:XM_059884287.1;gbkey=mRNA;gene=LOC132344629;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01044;gene_id=Cattle_Y_G00681;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884287.1-3
haplotype2-0000357	CAT	exon	41810751	41811187	.	-	.	ID=Cattle_Y_E01847;Parent=Cattle_Y_T01044;Dbxref=GeneID:132344629,GenBank:XM_059884287.1;gbkey=mRNA;gene=LOC132344629;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01044;gene_id=Cattle_Y_G00681;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884287.1-2
haplotype2-0000357	CAT	exon	41811239	41811425	.	-	.	ID=Cattle_Y_E01848;Parent=Cattle_Y_T01044;Dbxref=GeneID:132344629,GenBank:XM_059884287.1;gbkey=mRNA;gene=LOC132344629;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01044;gene_id=Cattle_Y_G00681;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884287.1-1
haplotype2-0000357	CAT	CDS	41807879	41807956	.	-	0	ID=Cattle_Y_C01484;Parent=Cattle_Y_T01044;Dbxref=GeneID:132344629,GenBank:XP_059740270.1;Name=XP_059740270.1;gbkey=CDS;gene=LOC132344629;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740270.1;gene_id=Cattle_Y_G00681;transcript_id=Cattle_Y_T01044;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41808073	41808218	.	-	2	ID=Cattle_Y_C01485;Parent=Cattle_Y_T01044;Dbxref=GeneID:132344629,GenBank:XP_059740270.1;Name=XP_059740270.1;gbkey=CDS;gene=LOC132344629;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740270.1;gene_id=Cattle_Y_G00681;transcript_id=Cattle_Y_T01044;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41808313	41808418	.	-	0	ID=Cattle_Y_C01486;Parent=Cattle_Y_T01044;Dbxref=GeneID:132344629,GenBank:XP_059740270.1;Name=XP_059740270.1;gbkey=CDS;gene=LOC132344629;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740270.1;gene_id=Cattle_Y_G00681;transcript_id=Cattle_Y_T01044;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41808607	41808684	.	-	0	ID=Cattle_Y_C01487;Parent=Cattle_Y_T01044;Dbxref=GeneID:132344629,GenBank:XP_059740270.1;Name=XP_059740270.1;gbkey=CDS;gene=LOC132344629;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740270.1;gene_id=Cattle_Y_G00681;transcript_id=Cattle_Y_T01044;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41810751	41811187	.	-	2	ID=Cattle_Y_C01488;Parent=Cattle_Y_T01044;Dbxref=GeneID:132344629,GenBank:XP_059740270.1;Name=XP_059740270.1;gbkey=CDS;gene=LOC132344629;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740270.1;gene_id=Cattle_Y_G00681;transcript_id=Cattle_Y_T01044;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	41811239	41811362	.	-	0	ID=Cattle_Y_C01489;Parent=Cattle_Y_T01044;Dbxref=GeneID:132344629,GenBank:XP_059740270.1;Name=XP_059740270.1;gbkey=CDS;gene=LOC132344629;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740270.1;gene_id=Cattle_Y_G00681;transcript_id=Cattle_Y_T01044;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	42117507	42121064	.	+	.	ID=Cattle_Y_G00682;Dbxref=GeneID:132344636;Name=LOC132344636;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344636;gene_biotype=protein_coding;gene_id=Cattle_Y_G00682;source_id=gene-LOC132344636
haplotype2-0000357	CAT	mRNA	42117507	42121064	.	+	.	ID=Cattle_Y_T01045;Parent=Cattle_Y_G00682;Dbxref=GeneID:132344636,GenBank:XM_059884291.1;Name=XM_059884291.1;gbkey=mRNA;gene=LOC132344636;model_evidence=Supporting evidence includes similarity to: 5 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01045;gene_id=Cattle_Y_G00682;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884291.1
haplotype2-0000357	CAT	exon	42117507	42117693	.	+	.	ID=Cattle_Y_E01849;Parent=Cattle_Y_T01045;Dbxref=GeneID:132344636,GenBank:XM_059884291.1;gbkey=mRNA;gene=LOC132344636;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01045;gene_id=Cattle_Y_G00682;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884291.1-1
haplotype2-0000357	CAT	exon	42117745	42118181	.	+	.	ID=Cattle_Y_E01850;Parent=Cattle_Y_T01045;Dbxref=GeneID:132344636,GenBank:XM_059884291.1;gbkey=mRNA;gene=LOC132344636;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01045;gene_id=Cattle_Y_G00682;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884291.1-1
haplotype2-0000357	CAT	exon	42120259	42120336	.	+	.	ID=Cattle_Y_E01851;Parent=Cattle_Y_T01045;Dbxref=GeneID:132344636,GenBank:XM_059884291.1;gbkey=mRNA;gene=LOC132344636;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01045;gene_id=Cattle_Y_G00682;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884291.1-1
haplotype2-0000357	CAT	exon	42120525	42120630	.	+	.	ID=Cattle_Y_E01852;Parent=Cattle_Y_T01045;Dbxref=GeneID:132344636,GenBank:XM_059884291.1;gbkey=mRNA;gene=LOC132344636;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01045;gene_id=Cattle_Y_G00682;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884291.1-1
haplotype2-0000357	CAT	exon	42120725	42120870	.	+	.	ID=Cattle_Y_E01853;Parent=Cattle_Y_T01045;Dbxref=GeneID:132344636,GenBank:XM_059884291.1;gbkey=mRNA;gene=LOC132344636;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01045;gene_id=Cattle_Y_G00682;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884291.1-1
haplotype2-0000357	CAT	exon	42120987	42121064	.	+	.	ID=Cattle_Y_E01854;Parent=Cattle_Y_T01045;Dbxref=GeneID:132344636,GenBank:XM_059884291.1;gbkey=mRNA;gene=LOC132344636;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01045;gene_id=Cattle_Y_G00682;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884291.1-6
haplotype2-0000357	CAT	CDS	42117570	42117693	.	+	0	ID=Cattle_Y_C01490;Parent=Cattle_Y_T01045;gene_id=Cattle_Y_G00682;transcript_id=Cattle_Y_T01045;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42117745	42118181	.	+	2	ID=Cattle_Y_C01491;Parent=Cattle_Y_T01045;gene_id=Cattle_Y_G00682;transcript_id=Cattle_Y_T01045;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42120259	42120336	.	+	0	ID=Cattle_Y_C01492;Parent=Cattle_Y_T01045;gene_id=Cattle_Y_G00682;transcript_id=Cattle_Y_T01045;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42120525	42120630	.	+	0	ID=Cattle_Y_C01493;Parent=Cattle_Y_T01045;gene_id=Cattle_Y_G00682;transcript_id=Cattle_Y_T01045;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42120725	42120870	.	+	2	ID=Cattle_Y_C01494;Parent=Cattle_Y_T01045;gene_id=Cattle_Y_G00682;transcript_id=Cattle_Y_T01045;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42120987	42121064	.	+	0	ID=Cattle_Y_C01495;Parent=Cattle_Y_T01045;gene_id=Cattle_Y_G00682;transcript_id=Cattle_Y_T01045;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	42122083	42131637	.	-	.	ID=Cattle_Y_G00683;Dbxref=GeneID:132344440;Name=LOC132344440;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344440;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00683;source_id=gene-LOC132344440
haplotype2-0000357	CAT	exon	42122083	42122220	.	-	.	ID=Cattle_Y_T01046;Parent=Cattle_Y_G00683;Dbxref=GeneID:132344440;gbkey=exon;gene=LOC132344440;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 61%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00683;transcript_id=Cattle_Y_T01046;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344440
haplotype2-0000357	CAT	exon	42123272	42123435	.	-	.	ID=Cattle_Y_T01047;Parent=Cattle_Y_G00683;Dbxref=GeneID:132344440;gbkey=exon;gene=LOC132344440;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 61%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00683;transcript_id=Cattle_Y_T01047;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344440-2
haplotype2-0000357	CAT	exon	42130411	42131637	.	-	.	ID=Cattle_Y_T01048;Parent=Cattle_Y_G00683;Dbxref=GeneID:132344440;gbkey=exon;gene=LOC132344440;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 61%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00683;transcript_id=Cattle_Y_T01048;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344440-3
haplotype2-0000357	CAT	gene	42178388	42183471	.	+	.	ID=Cattle_Y_G00684;Dbxref=GeneID:132344485;Name=LOC132344485;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC132344485;gene_biotype=protein_coding;gene_id=Cattle_Y_G00684;source_id=gene-LOC132344485
haplotype2-0000357	CAT	mRNA	42178388	42183471	.	+	.	ID=Cattle_Y_T01049;Parent=Cattle_Y_G00684;Dbxref=GeneID:132344485,GenBank:XM_059884098.1;Name=XM_059884098.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344485;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 17 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01049;gene_id=Cattle_Y_G00684;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884098.1
haplotype2-0000357	CAT	exon	42178388	42178435	.	+	.	ID=Cattle_Y_E01855;Parent=Cattle_Y_T01049;Dbxref=GeneID:132344485,GenBank:XM_059884098.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344485;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01049;gene_id=Cattle_Y_G00684;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884098.1-1
haplotype2-0000357	CAT	exon	42179252	42179318	.	+	.	ID=Cattle_Y_E01856;Parent=Cattle_Y_T01049;Dbxref=GeneID:132344485,GenBank:XM_059884098.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344485;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01049;gene_id=Cattle_Y_G00684;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884098.1-2
haplotype2-0000357	CAT	exon	42180681	42181000	.	+	.	ID=Cattle_Y_E01857;Parent=Cattle_Y_T01049;Dbxref=GeneID:132344485,GenBank:XM_059884098.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344485;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01049;gene_id=Cattle_Y_G00684;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884098.1-3
haplotype2-0000357	CAT	exon	42181285	42181887	.	+	.	ID=Cattle_Y_E01858;Parent=Cattle_Y_T01049;Dbxref=GeneID:132344485,GenBank:XM_059884098.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344485;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01049;gene_id=Cattle_Y_G00684;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884098.1-4
haplotype2-0000357	CAT	exon	42182646	42183471	.	+	.	ID=Cattle_Y_E01859;Parent=Cattle_Y_T01049;Dbxref=GeneID:132344485,GenBank:XM_059884098.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344485;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01049;gene_id=Cattle_Y_G00684;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884098.1-5
haplotype2-0000357	CAT	CDS	42179283	42179318	.	+	0	ID=Cattle_Y_C01496;Parent=Cattle_Y_T01049;Dbxref=GeneID:132344485,GenBank:XP_059740081.1;Name=XP_059740081.1;gbkey=CDS;gene=LOC132344485;product=melanoma antigen preferentially expressed in tumors-like;protein_id=XP_059740081.1;gene_id=Cattle_Y_G00684;transcript_id=Cattle_Y_T01049;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42180681	42181000	.	+	0	ID=Cattle_Y_C01497;Parent=Cattle_Y_T01049;Dbxref=GeneID:132344485,GenBank:XP_059740081.1;Name=XP_059740081.1;gbkey=CDS;gene=LOC132344485;product=melanoma antigen preferentially expressed in tumors-like;protein_id=XP_059740081.1;gene_id=Cattle_Y_G00684;transcript_id=Cattle_Y_T01049;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42181285	42181887	.	+	1	ID=Cattle_Y_C01498;Parent=Cattle_Y_T01049;Dbxref=GeneID:132344485,GenBank:XP_059740081.1;Name=XP_059740081.1;gbkey=CDS;gene=LOC132344485;product=melanoma antigen preferentially expressed in tumors-like;protein_id=XP_059740081.1;gene_id=Cattle_Y_G00684;transcript_id=Cattle_Y_T01049;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42182646	42183222	.	+	1	ID=Cattle_Y_C01499;Parent=Cattle_Y_T01049;Dbxref=GeneID:132344485,GenBank:XP_059740081.1;Name=XP_059740081.1;gbkey=CDS;gene=LOC132344485;product=melanoma antigen preferentially expressed in tumors-like;protein_id=XP_059740081.1;gene_id=Cattle_Y_G00684;transcript_id=Cattle_Y_T01049;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	42190424	42196716	.	+	.	ID=Cattle_Y_G00685;Dbxref=GeneID:132344441;Name=LOC132344441;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344441;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00685;source_id=gene-LOC132344441
haplotype2-0000357	CAT	exon	42190424	42190479	.	+	.	ID=Cattle_Y_T01050;Parent=Cattle_Y_G00685;Dbxref=GeneID:132344441;gbkey=exon;gene=LOC132344441;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00685;transcript_id=Cattle_Y_T01050;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344441
haplotype2-0000357	CAT	exon	42195564	42195929	.	+	.	ID=Cattle_Y_T01051;Parent=Cattle_Y_G00685;Dbxref=GeneID:132344441;gbkey=exon;gene=LOC132344441;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00685;transcript_id=Cattle_Y_T01051;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344441-2
haplotype2-0000357	CAT	exon	42195974	42196716	.	+	.	ID=Cattle_Y_T01052;Parent=Cattle_Y_G00685;Dbxref=GeneID:132344441;gbkey=exon;gene=LOC132344441;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00685;transcript_id=Cattle_Y_T01052;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344441-3
haplotype2-0000357	CAT	gene	42205082	42210311	.	-	.	ID=Cattle_Y_G00686;Dbxref=GeneID:132344500;Name=LOC132344500;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC132344500;gene_biotype=protein_coding;gene_id=Cattle_Y_G00686;source_id=gene-LOC132344500
haplotype2-0000357	CAT	mRNA	42205082	42210311	.	-	.	ID=Cattle_Y_T01053;Parent=Cattle_Y_G00686;Dbxref=GeneID:132344500,GenBank:XM_059884124.1;Name=XM_059884124.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344500;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 14 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X1;transcript_id=Cattle_Y_T01053;gene_id=Cattle_Y_G00686;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884124.1
haplotype2-0000357	CAT	exon	42205082	42205907	.	-	.	ID=Cattle_Y_E01860;Parent=Cattle_Y_T01053;Dbxref=GeneID:132344500,GenBank:XM_059884124.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344500;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T01053;gene_id=Cattle_Y_G00686;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884124.1-5
haplotype2-0000357	CAT	exon	42206666	42207268	.	-	.	ID=Cattle_Y_E01861;Parent=Cattle_Y_T01053;Dbxref=GeneID:132344500,GenBank:XM_059884124.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344500;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T01053;gene_id=Cattle_Y_G00686;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884124.1-4
haplotype2-0000357	CAT	exon	42207553	42207872	.	-	.	ID=Cattle_Y_E01862;Parent=Cattle_Y_T01053;Dbxref=GeneID:132344500,GenBank:XM_059884124.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344500;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T01053;gene_id=Cattle_Y_G00686;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884124.1-3
haplotype2-0000357	CAT	exon	42209235	42209301	.	-	.	ID=Cattle_Y_E01863;Parent=Cattle_Y_T01053;Dbxref=GeneID:132344500,GenBank:XM_059884124.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344500;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T01053;gene_id=Cattle_Y_G00686;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884124.1-2
haplotype2-0000357	CAT	exon	42210118	42210311	.	-	.	ID=Cattle_Y_E01864;Parent=Cattle_Y_T01053;Dbxref=GeneID:132344500,GenBank:XM_059884124.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344500;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X1;transcript_id=Cattle_Y_T01053;gene_id=Cattle_Y_G00686;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884124.1-1
haplotype2-0000357	CAT	CDS	42205331	42205907	.	-	1	ID=Cattle_Y_C01500;Parent=Cattle_Y_T01053;Dbxref=GeneID:132344500,GenBank:XP_059740107.1;Name=XP_059740107.1;gbkey=CDS;gene=LOC132344500;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740107.1;gene_id=Cattle_Y_G00686;transcript_id=Cattle_Y_T01053;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42206666	42207268	.	-	1	ID=Cattle_Y_C01501;Parent=Cattle_Y_T01053;Dbxref=GeneID:132344500,GenBank:XP_059740107.1;Name=XP_059740107.1;gbkey=CDS;gene=LOC132344500;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740107.1;gene_id=Cattle_Y_G00686;transcript_id=Cattle_Y_T01053;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42207553	42207872	.	-	0	ID=Cattle_Y_C01502;Parent=Cattle_Y_T01053;Dbxref=GeneID:132344500,GenBank:XP_059740107.1;Name=XP_059740107.1;gbkey=CDS;gene=LOC132344500;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740107.1;gene_id=Cattle_Y_G00686;transcript_id=Cattle_Y_T01053;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42209235	42209270	.	-	0	ID=Cattle_Y_C01503;Parent=Cattle_Y_T01053;Dbxref=GeneID:132344500,GenBank:XP_059740107.1;Name=XP_059740107.1;gbkey=CDS;gene=LOC132344500;product=melanoma antigen preferentially expressed in tumors-like isoform X1;protein_id=XP_059740107.1;gene_id=Cattle_Y_G00686;transcript_id=Cattle_Y_T01053;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	42205082	42210311	.	-	.	ID=Cattle_Y_T01054;Parent=Cattle_Y_G00686;Dbxref=GeneID:132344500,GenBank:XM_059884125.1;Name=XM_059884125.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344500;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 12 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like%2C transcript variant X2;transcript_id=Cattle_Y_T01054;gene_id=Cattle_Y_G00686;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884125.1
haplotype2-0000357	CAT	exon	42205082	42205907	.	-	.	ID=Cattle_Y_E01865;Parent=Cattle_Y_T01054;Dbxref=GeneID:132344500,GenBank:XM_059884125.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344500;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T01054;gene_id=Cattle_Y_G00686;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884125.1-4
haplotype2-0000357	CAT	exon	42206666	42207268	.	-	.	ID=Cattle_Y_E01866;Parent=Cattle_Y_T01054;Dbxref=GeneID:132344500,GenBank:XM_059884125.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344500;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T01054;gene_id=Cattle_Y_G00686;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884125.1-3
haplotype2-0000357	CAT	exon	42207553	42207872	.	-	.	ID=Cattle_Y_E01867;Parent=Cattle_Y_T01054;Dbxref=GeneID:132344500,GenBank:XM_059884125.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344500;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T01054;gene_id=Cattle_Y_G00686;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884125.1-2
haplotype2-0000357	CAT	exon	42210118	42210311	.	-	.	ID=Cattle_Y_E01868;Parent=Cattle_Y_T01054;Dbxref=GeneID:132344500,GenBank:XM_059884125.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344500;product=melanoma antigen preferentially expressed in tumors-like, transcript variant X2;transcript_id=Cattle_Y_T01054;gene_id=Cattle_Y_G00686;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884125.1-1
haplotype2-0000357	CAT	CDS	42205331	42205907	.	-	1	ID=Cattle_Y_C01504;Parent=Cattle_Y_T01054;Dbxref=GeneID:132344500,GenBank:XP_059740108.1;Name=XP_059740108.1;gbkey=CDS;gene=LOC132344500;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740108.1;gene_id=Cattle_Y_G00686;transcript_id=Cattle_Y_T01054;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42206666	42207268	.	-	1	ID=Cattle_Y_C01505;Parent=Cattle_Y_T01054;Dbxref=GeneID:132344500,GenBank:XP_059740108.1;Name=XP_059740108.1;gbkey=CDS;gene=LOC132344500;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740108.1;gene_id=Cattle_Y_G00686;transcript_id=Cattle_Y_T01054;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42207553	42207845	.	-	0	ID=Cattle_Y_C01506;Parent=Cattle_Y_T01054;Dbxref=GeneID:132344500,GenBank:XP_059740108.1;Name=XP_059740108.1;gbkey=CDS;gene=LOC132344500;product=melanoma antigen preferentially expressed in tumors-like isoform X2;protein_id=XP_059740108.1;gene_id=Cattle_Y_G00686;transcript_id=Cattle_Y_T01054;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	42256536	42257867	.	+	.	ID=Cattle_Y_G00687;Dbxref=GeneID:132344631;Name=LOC132344631;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344631;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00687;source_id=gene-LOC132344631
haplotype2-0000357	CAT	exon	42256536	42257867	.	+	.	ID=Cattle_Y_T01055;Parent=Cattle_Y_G00687;Dbxref=GeneID:132344631;gbkey=exon;gene=LOC132344631;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 81%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00687;transcript_id=Cattle_Y_T01055;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344631
haplotype2-0000357	CAT	gene	42267437	42271017	.	-	.	ID=Cattle_Y_G00688;Dbxref=GeneID:132344632;Name=LOC132344632;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344632;gene_biotype=protein_coding;gene_id=Cattle_Y_G00688;source_id=gene-LOC132344632
haplotype2-0000357	CAT	mRNA	42267437	42271017	.	-	.	ID=Cattle_Y_T01056;Parent=Cattle_Y_G00688;Dbxref=GeneID:132344632,GenBank:XM_059884289.1;Name=XM_059884289.1;gbkey=mRNA;gene=LOC132344632;model_evidence=Supporting evidence includes similarity to: 6 Proteins%2C and 9%25 coverage of the annotated genomic feature by RNAseq alignments;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01056;gene_id=Cattle_Y_G00688;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884289.1
haplotype2-0000357	CAT	exon	42267437	42267575	.	-	.	ID=Cattle_Y_E01869;Parent=Cattle_Y_T01056;Dbxref=GeneID:132344632,GenBank:XM_059884289.1;gbkey=mRNA;gene=LOC132344632;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01056;gene_id=Cattle_Y_G00688;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884289.1-6
haplotype2-0000357	CAT	exon	42267692	42267837	.	-	.	ID=Cattle_Y_E01870;Parent=Cattle_Y_T01056;Dbxref=GeneID:132344632,GenBank:XM_059884289.1;gbkey=mRNA;gene=LOC132344632;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01056;gene_id=Cattle_Y_G00688;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884289.1-5
haplotype2-0000357	CAT	exon	42267932	42268037	.	-	.	ID=Cattle_Y_E01871;Parent=Cattle_Y_T01056;Dbxref=GeneID:132344632,GenBank:XM_059884289.1;gbkey=mRNA;gene=LOC132344632;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01056;gene_id=Cattle_Y_G00688;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884289.1-4
haplotype2-0000357	CAT	exon	42268226	42268303	.	-	.	ID=Cattle_Y_E01872;Parent=Cattle_Y_T01056;Dbxref=GeneID:132344632,GenBank:XM_059884289.1;gbkey=mRNA;gene=LOC132344632;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01056;gene_id=Cattle_Y_G00688;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884289.1-3
haplotype2-0000357	CAT	exon	42270391	42270827	.	-	.	ID=Cattle_Y_E01873;Parent=Cattle_Y_T01056;Dbxref=GeneID:132344632,GenBank:XM_059884289.1;gbkey=mRNA;gene=LOC132344632;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01056;gene_id=Cattle_Y_G00688;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884289.1-2
haplotype2-0000357	CAT	exon	42270879	42271017	.	-	.	ID=Cattle_Y_E01874;Parent=Cattle_Y_T01056;Dbxref=GeneID:132344632,GenBank:XM_059884289.1;gbkey=mRNA;gene=LOC132344632;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01056;gene_id=Cattle_Y_G00688;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884289.1-1
haplotype2-0000357	CAT	CDS	42267498	42267575	.	-	0	ID=Cattle_Y_C01507;Parent=Cattle_Y_T01056;Dbxref=GeneID:132344632,GenBank:XP_059740272.1;Name=XP_059740272.1;gbkey=CDS;gene=LOC132344632;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740272.1;gene_id=Cattle_Y_G00688;transcript_id=Cattle_Y_T01056;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42267692	42267837	.	-	2	ID=Cattle_Y_C01508;Parent=Cattle_Y_T01056;Dbxref=GeneID:132344632,GenBank:XP_059740272.1;Name=XP_059740272.1;gbkey=CDS;gene=LOC132344632;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740272.1;gene_id=Cattle_Y_G00688;transcript_id=Cattle_Y_T01056;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42267932	42268037	.	-	0	ID=Cattle_Y_C01509;Parent=Cattle_Y_T01056;Dbxref=GeneID:132344632,GenBank:XP_059740272.1;Name=XP_059740272.1;gbkey=CDS;gene=LOC132344632;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740272.1;gene_id=Cattle_Y_G00688;transcript_id=Cattle_Y_T01056;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42268226	42268303	.	-	0	ID=Cattle_Y_C01510;Parent=Cattle_Y_T01056;Dbxref=GeneID:132344632,GenBank:XP_059740272.1;Name=XP_059740272.1;gbkey=CDS;gene=LOC132344632;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740272.1;gene_id=Cattle_Y_G00688;transcript_id=Cattle_Y_T01056;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42270391	42270827	.	-	2	ID=Cattle_Y_C01511;Parent=Cattle_Y_T01056;Dbxref=GeneID:132344632,GenBank:XP_059740272.1;Name=XP_059740272.1;gbkey=CDS;gene=LOC132344632;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740272.1;gene_id=Cattle_Y_G00688;transcript_id=Cattle_Y_T01056;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42270879	42271002	.	-	0	ID=Cattle_Y_C01512;Parent=Cattle_Y_T01056;Dbxref=GeneID:132344632,GenBank:XP_059740272.1;Name=XP_059740272.1;gbkey=CDS;gene=LOC132344632;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740272.1;gene_id=Cattle_Y_G00688;transcript_id=Cattle_Y_T01056;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	42285968	42289612	.	-	.	ID=Cattle_Y_G00689;Dbxref=GeneID:132344496;Name=LOC132344496;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344496;gene_biotype=protein_coding;gene_id=Cattle_Y_G00689;source_id=gene-LOC132344496
haplotype2-0000357	CAT	mRNA	42285968	42289612	.	-	.	ID=Cattle_Y_T01057;Parent=Cattle_Y_G00689;Dbxref=GeneID:132344496,GenBank:XM_059884117.1;Name=XM_059884117.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344496;model_evidence=Supporting evidence includes similarity to: 3 ESTs%2C 5 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T01057;gene_id=Cattle_Y_G00689;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884117.1
haplotype2-0000357	CAT	exon	42285968	42286187	.	-	.	ID=Cattle_Y_E01875;Parent=Cattle_Y_T01057;Dbxref=GeneID:132344496,GenBank:XM_059884117.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344496;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01057;gene_id=Cattle_Y_G00689;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884117.1-6
haplotype2-0000357	CAT	exon	42287446	42287532	.	-	.	ID=Cattle_Y_E01876;Parent=Cattle_Y_T01057;Dbxref=GeneID:132344496,GenBank:XM_059884117.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344496;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01057;gene_id=Cattle_Y_G00689;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884117.1-5
haplotype2-0000357	CAT	exon	42287652	42287797	.	-	.	ID=Cattle_Y_E01877;Parent=Cattle_Y_T01057;Dbxref=GeneID:132344496,GenBank:XM_059884117.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344496;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01057;gene_id=Cattle_Y_G00689;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884117.1-4
haplotype2-0000357	CAT	exon	42287939	42288050	.	-	.	ID=Cattle_Y_E01878;Parent=Cattle_Y_T01057;Dbxref=GeneID:132344496,GenBank:XM_059884117.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344496;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01057;gene_id=Cattle_Y_G00689;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884117.1-3
haplotype2-0000357	CAT	exon	42288193	42288270	.	-	.	ID=Cattle_Y_E01879;Parent=Cattle_Y_T01057;Dbxref=GeneID:132344496,GenBank:XM_059884117.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344496;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01057;gene_id=Cattle_Y_G00689;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884117.1-2
haplotype2-0000357	CAT	exon	42288868	42289612	.	-	.	ID=Cattle_Y_E01880;Parent=Cattle_Y_T01057;Dbxref=GeneID:132344496,GenBank:XM_059884117.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344496;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01057;gene_id=Cattle_Y_G00689;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884117.1-1
haplotype2-0000357	CAT	CDS	42286164	42286187	.	-	0	ID=Cattle_Y_C01513;Parent=Cattle_Y_T01057;Dbxref=GeneID:132344496,GenBank:XP_059740100.1;Name=XP_059740100.1;gbkey=CDS;gene=LOC132344496;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740100.1;gene_id=Cattle_Y_G00689;transcript_id=Cattle_Y_T01057;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42287446	42287532	.	-	0	ID=Cattle_Y_C01514;Parent=Cattle_Y_T01057;Dbxref=GeneID:132344496,GenBank:XP_059740100.1;Name=XP_059740100.1;gbkey=CDS;gene=LOC132344496;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740100.1;gene_id=Cattle_Y_G00689;transcript_id=Cattle_Y_T01057;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42287652	42287797	.	-	2	ID=Cattle_Y_C01515;Parent=Cattle_Y_T01057;Dbxref=GeneID:132344496,GenBank:XP_059740100.1;Name=XP_059740100.1;gbkey=CDS;gene=LOC132344496;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740100.1;gene_id=Cattle_Y_G00689;transcript_id=Cattle_Y_T01057;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42287939	42288050	.	-	0	ID=Cattle_Y_C01516;Parent=Cattle_Y_T01057;Dbxref=GeneID:132344496,GenBank:XP_059740100.1;Name=XP_059740100.1;gbkey=CDS;gene=LOC132344496;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740100.1;gene_id=Cattle_Y_G00689;transcript_id=Cattle_Y_T01057;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42288193	42288270	.	-	0	ID=Cattle_Y_C01517;Parent=Cattle_Y_T01057;Dbxref=GeneID:132344496,GenBank:XP_059740100.1;Name=XP_059740100.1;gbkey=CDS;gene=LOC132344496;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740100.1;gene_id=Cattle_Y_G00689;transcript_id=Cattle_Y_T01057;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42288868	42289395	.	-	0	ID=Cattle_Y_C01518;Parent=Cattle_Y_T01057;Dbxref=GeneID:132344496,GenBank:XP_059740100.1;Name=XP_059740100.1;gbkey=CDS;gene=LOC132344496;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740100.1;gene_id=Cattle_Y_G00689;transcript_id=Cattle_Y_T01057;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	42285968	42289612	.	-	.	ID=Cattle_Y_T01058;Parent=Cattle_Y_G00689;Dbxref=GeneID:132344496,GenBank:XM_059884118.1;Name=XM_059884118.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344496;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T01058;gene_id=Cattle_Y_G00689;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884118.1
haplotype2-0000357	CAT	exon	42285968	42286187	.	-	.	ID=Cattle_Y_E01881;Parent=Cattle_Y_T01058;Dbxref=GeneID:132344496,GenBank:XM_059884118.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344496;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01058;gene_id=Cattle_Y_G00689;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884118.1-5
haplotype2-0000357	CAT	exon	42287446	42287532	.	-	.	ID=Cattle_Y_E01882;Parent=Cattle_Y_T01058;Dbxref=GeneID:132344496,GenBank:XM_059884118.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344496;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01058;gene_id=Cattle_Y_G00689;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884118.1-4
haplotype2-0000357	CAT	exon	42287652	42287797	.	-	.	ID=Cattle_Y_E01883;Parent=Cattle_Y_T01058;Dbxref=GeneID:132344496,GenBank:XM_059884118.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344496;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01058;gene_id=Cattle_Y_G00689;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884118.1-3
haplotype2-0000357	CAT	exon	42287939	42288050	.	-	.	ID=Cattle_Y_E01884;Parent=Cattle_Y_T01058;Dbxref=GeneID:132344496,GenBank:XM_059884118.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344496;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01058;gene_id=Cattle_Y_G00689;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884118.1-2
haplotype2-0000357	CAT	exon	42288847	42289612	.	-	.	ID=Cattle_Y_E01885;Parent=Cattle_Y_T01058;Dbxref=GeneID:132344496,GenBank:XM_059884118.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344496;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01058;gene_id=Cattle_Y_G00689;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884118.1-1
haplotype2-0000357	CAT	CDS	42286164	42286187	.	-	0	ID=Cattle_Y_C01519;Parent=Cattle_Y_T01058;Dbxref=GeneID:132344496,GenBank:XP_059740101.1;Name=XP_059740101.1;gbkey=CDS;gene=LOC132344496;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740101.1;gene_id=Cattle_Y_G00689;transcript_id=Cattle_Y_T01058;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42287446	42287532	.	-	0	ID=Cattle_Y_C01520;Parent=Cattle_Y_T01058;Dbxref=GeneID:132344496,GenBank:XP_059740101.1;Name=XP_059740101.1;gbkey=CDS;gene=LOC132344496;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740101.1;gene_id=Cattle_Y_G00689;transcript_id=Cattle_Y_T01058;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42287652	42287797	.	-	2	ID=Cattle_Y_C01521;Parent=Cattle_Y_T01058;Dbxref=GeneID:132344496,GenBank:XP_059740101.1;Name=XP_059740101.1;gbkey=CDS;gene=LOC132344496;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740101.1;gene_id=Cattle_Y_G00689;transcript_id=Cattle_Y_T01058;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42287939	42288050	.	-	0	ID=Cattle_Y_C01522;Parent=Cattle_Y_T01058;Dbxref=GeneID:132344496,GenBank:XP_059740101.1;Name=XP_059740101.1;gbkey=CDS;gene=LOC132344496;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740101.1;gene_id=Cattle_Y_G00689;transcript_id=Cattle_Y_T01058;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42288847	42289395	.	-	0	ID=Cattle_Y_C01523;Parent=Cattle_Y_T01058;Dbxref=GeneID:132344496,GenBank:XP_059740101.1;Name=XP_059740101.1;gbkey=CDS;gene=LOC132344496;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740101.1;gene_id=Cattle_Y_G00689;transcript_id=Cattle_Y_T01058;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	42301668	42305322	.	-	.	ID=Cattle_Y_G00690;Dbxref=GeneID:132344474;Name=LOC132344474;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344474;gene_biotype=protein_coding;gene_id=Cattle_Y_G00690;source_id=gene-LOC132344474
haplotype2-0000357	CAT	mRNA	42301668	42305320	.	-	.	ID=Cattle_Y_T01059;Parent=Cattle_Y_G00690;Dbxref=GeneID:132344474,GenBank:XM_059884075.1;Name=XM_059884075.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344474;model_evidence=Supporting evidence includes similarity to: 4 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T01059;gene_id=Cattle_Y_G00690;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884075.1
haplotype2-0000357	CAT	exon	42301668	42301887	.	-	.	ID=Cattle_Y_E01886;Parent=Cattle_Y_T01059;Dbxref=GeneID:132344474,GenBank:XM_059884075.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344474;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01059;gene_id=Cattle_Y_G00690;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884075.1-6
haplotype2-0000357	CAT	exon	42303146	42303232	.	-	.	ID=Cattle_Y_E01887;Parent=Cattle_Y_T01059;Dbxref=GeneID:132344474,GenBank:XM_059884075.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344474;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01059;gene_id=Cattle_Y_G00690;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884075.1-6
haplotype2-0000357	CAT	exon	42303352	42303497	.	-	.	ID=Cattle_Y_E01888;Parent=Cattle_Y_T01059;Dbxref=GeneID:132344474,GenBank:XM_059884075.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344474;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01059;gene_id=Cattle_Y_G00690;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884075.1-6
haplotype2-0000357	CAT	exon	42303639	42303750	.	-	.	ID=Cattle_Y_E01889;Parent=Cattle_Y_T01059;Dbxref=GeneID:132344474,GenBank:XM_059884075.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344474;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01059;gene_id=Cattle_Y_G00690;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884075.1-6
haplotype2-0000357	CAT	exon	42303893	42303970	.	-	.	ID=Cattle_Y_E01890;Parent=Cattle_Y_T01059;Dbxref=GeneID:132344474,GenBank:XM_059884075.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344474;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01059;gene_id=Cattle_Y_G00690;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884075.1-6
haplotype2-0000357	CAT	exon	42304568	42305320	.	-	.	ID=Cattle_Y_E01891;Parent=Cattle_Y_T01059;Dbxref=GeneID:132344474,GenBank:XM_059884075.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344474;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01059;gene_id=Cattle_Y_G00690;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884075.1-1
haplotype2-0000357	CAT	CDS	42301864	42301887	.	-	0	ID=Cattle_Y_C01524;Parent=Cattle_Y_T01059;gene_id=Cattle_Y_G00690;transcript_id=Cattle_Y_T01059;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42303146	42303232	.	-	0	ID=Cattle_Y_C01525;Parent=Cattle_Y_T01059;gene_id=Cattle_Y_G00690;transcript_id=Cattle_Y_T01059;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42303352	42303497	.	-	2	ID=Cattle_Y_C01526;Parent=Cattle_Y_T01059;gene_id=Cattle_Y_G00690;transcript_id=Cattle_Y_T01059;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42303639	42303750	.	-	0	ID=Cattle_Y_C01527;Parent=Cattle_Y_T01059;gene_id=Cattle_Y_G00690;transcript_id=Cattle_Y_T01059;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42303893	42303970	.	-	0	ID=Cattle_Y_C01528;Parent=Cattle_Y_T01059;gene_id=Cattle_Y_G00690;transcript_id=Cattle_Y_T01059;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42304568	42305095	.	-	0	ID=Cattle_Y_C01529;Parent=Cattle_Y_T01059;gene_id=Cattle_Y_G00690;transcript_id=Cattle_Y_T01059;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	42301668	42305322	.	-	.	ID=Cattle_Y_T01060;Parent=Cattle_Y_G00690;Dbxref=GeneID:132344474,GenBank:XM_059884076.1;Name=XM_059884076.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344474;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T01060;gene_id=Cattle_Y_G00690;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884076.1
haplotype2-0000357	CAT	exon	42301668	42301887	.	-	.	ID=Cattle_Y_E01892;Parent=Cattle_Y_T01060;Dbxref=GeneID:132344474,GenBank:XM_059884076.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344474;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01060;gene_id=Cattle_Y_G00690;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884076.1-5
haplotype2-0000357	CAT	exon	42303146	42303232	.	-	.	ID=Cattle_Y_E01893;Parent=Cattle_Y_T01060;Dbxref=GeneID:132344474,GenBank:XM_059884076.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344474;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01060;gene_id=Cattle_Y_G00690;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884076.1-5
haplotype2-0000357	CAT	exon	42303352	42303497	.	-	.	ID=Cattle_Y_E01894;Parent=Cattle_Y_T01060;Dbxref=GeneID:132344474,GenBank:XM_059884076.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344474;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01060;gene_id=Cattle_Y_G00690;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884076.1-5
haplotype2-0000357	CAT	exon	42303639	42303750	.	-	.	ID=Cattle_Y_E01895;Parent=Cattle_Y_T01060;Dbxref=GeneID:132344474,GenBank:XM_059884076.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344474;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01060;gene_id=Cattle_Y_G00690;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884076.1-5
haplotype2-0000357	CAT	exon	42304547	42305322	.	-	.	ID=Cattle_Y_E01896;Parent=Cattle_Y_T01060;Dbxref=GeneID:132344474,GenBank:XM_059884076.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344474;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01060;gene_id=Cattle_Y_G00690;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884076.1-1
haplotype2-0000357	CAT	CDS	42301864	42301887	.	-	0	ID=Cattle_Y_C01530;Parent=Cattle_Y_T01060;gene_id=Cattle_Y_G00690;transcript_id=Cattle_Y_T01060;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42303146	42303232	.	-	0	ID=Cattle_Y_C01531;Parent=Cattle_Y_T01060;gene_id=Cattle_Y_G00690;transcript_id=Cattle_Y_T01060;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42303352	42303497	.	-	2	ID=Cattle_Y_C01532;Parent=Cattle_Y_T01060;gene_id=Cattle_Y_G00690;transcript_id=Cattle_Y_T01060;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42303639	42303750	.	-	0	ID=Cattle_Y_C01533;Parent=Cattle_Y_T01060;gene_id=Cattle_Y_G00690;transcript_id=Cattle_Y_T01060;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42304547	42305095	.	-	0	ID=Cattle_Y_C01534;Parent=Cattle_Y_T01060;gene_id=Cattle_Y_G00690;transcript_id=Cattle_Y_T01060;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	42317259	42320788	.	-	.	ID=Cattle_Y_G00691;Dbxref=GeneID:132344487;Name=LOC132344487;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344487;gene_biotype=protein_coding;gene_id=Cattle_Y_G00691;source_id=gene-LOC132344487
haplotype2-0000357	CAT	mRNA	42317259	42320788	.	-	.	ID=Cattle_Y_T01061;Parent=Cattle_Y_G00691;Dbxref=GeneID:132344487,GenBank:XM_059884100.1;Name=XM_059884100.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344487;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 6 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T01061;gene_id=Cattle_Y_G00691;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884100.1
haplotype2-0000357	CAT	exon	42317259	42317478	.	-	.	ID=Cattle_Y_E01897;Parent=Cattle_Y_T01061;Dbxref=GeneID:132344487,GenBank:XM_059884100.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01061;gene_id=Cattle_Y_G00691;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884100.1-6
haplotype2-0000357	CAT	exon	42318737	42318823	.	-	.	ID=Cattle_Y_E01898;Parent=Cattle_Y_T01061;Dbxref=GeneID:132344487,GenBank:XM_059884100.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01061;gene_id=Cattle_Y_G00691;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884100.1-5
haplotype2-0000357	CAT	exon	42318943	42319088	.	-	.	ID=Cattle_Y_E01899;Parent=Cattle_Y_T01061;Dbxref=GeneID:132344487,GenBank:XM_059884100.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01061;gene_id=Cattle_Y_G00691;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884100.1-4
haplotype2-0000357	CAT	exon	42319230	42319341	.	-	.	ID=Cattle_Y_E01900;Parent=Cattle_Y_T01061;Dbxref=GeneID:132344487,GenBank:XM_059884100.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01061;gene_id=Cattle_Y_G00691;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884100.1-3
haplotype2-0000357	CAT	exon	42319484	42319561	.	-	.	ID=Cattle_Y_E01901;Parent=Cattle_Y_T01061;Dbxref=GeneID:132344487,GenBank:XM_059884100.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01061;gene_id=Cattle_Y_G00691;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884100.1-2
haplotype2-0000357	CAT	exon	42320159	42320788	.	-	.	ID=Cattle_Y_E01902;Parent=Cattle_Y_T01061;Dbxref=GeneID:132344487,GenBank:XM_059884100.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01061;gene_id=Cattle_Y_G00691;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884100.1-1
haplotype2-0000357	CAT	CDS	42317455	42317478	.	-	0	ID=Cattle_Y_C01535;Parent=Cattle_Y_T01061;Dbxref=GeneID:132344487,GenBank:XP_059740083.1;Name=XP_059740083.1;gbkey=CDS;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740083.1;gene_id=Cattle_Y_G00691;transcript_id=Cattle_Y_T01061;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42318737	42318823	.	-	0	ID=Cattle_Y_C01536;Parent=Cattle_Y_T01061;Dbxref=GeneID:132344487,GenBank:XP_059740083.1;Name=XP_059740083.1;gbkey=CDS;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740083.1;gene_id=Cattle_Y_G00691;transcript_id=Cattle_Y_T01061;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42318943	42319088	.	-	2	ID=Cattle_Y_C01537;Parent=Cattle_Y_T01061;Dbxref=GeneID:132344487,GenBank:XP_059740083.1;Name=XP_059740083.1;gbkey=CDS;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740083.1;gene_id=Cattle_Y_G00691;transcript_id=Cattle_Y_T01061;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42319230	42319341	.	-	0	ID=Cattle_Y_C01538;Parent=Cattle_Y_T01061;Dbxref=GeneID:132344487,GenBank:XP_059740083.1;Name=XP_059740083.1;gbkey=CDS;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740083.1;gene_id=Cattle_Y_G00691;transcript_id=Cattle_Y_T01061;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42319484	42319561	.	-	0	ID=Cattle_Y_C01539;Parent=Cattle_Y_T01061;Dbxref=GeneID:132344487,GenBank:XP_059740083.1;Name=XP_059740083.1;gbkey=CDS;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740083.1;gene_id=Cattle_Y_G00691;transcript_id=Cattle_Y_T01061;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42320159	42320686	.	-	0	ID=Cattle_Y_C01540;Parent=Cattle_Y_T01061;Dbxref=GeneID:132344487,GenBank:XP_059740083.1;Name=XP_059740083.1;gbkey=CDS;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740083.1;gene_id=Cattle_Y_G00691;transcript_id=Cattle_Y_T01061;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	42317259	42320788	.	-	.	ID=Cattle_Y_T01062;Parent=Cattle_Y_G00691;Dbxref=GeneID:132344487,GenBank:XM_059884101.1;Name=XM_059884101.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344487;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T01062;gene_id=Cattle_Y_G00691;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884101.1
haplotype2-0000357	CAT	exon	42317259	42317478	.	-	.	ID=Cattle_Y_E01903;Parent=Cattle_Y_T01062;Dbxref=GeneID:132344487,GenBank:XM_059884101.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01062;gene_id=Cattle_Y_G00691;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884101.1-5
haplotype2-0000357	CAT	exon	42318737	42318823	.	-	.	ID=Cattle_Y_E01904;Parent=Cattle_Y_T01062;Dbxref=GeneID:132344487,GenBank:XM_059884101.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01062;gene_id=Cattle_Y_G00691;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884101.1-4
haplotype2-0000357	CAT	exon	42318943	42319088	.	-	.	ID=Cattle_Y_E01905;Parent=Cattle_Y_T01062;Dbxref=GeneID:132344487,GenBank:XM_059884101.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01062;gene_id=Cattle_Y_G00691;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884101.1-3
haplotype2-0000357	CAT	exon	42319230	42319341	.	-	.	ID=Cattle_Y_E01906;Parent=Cattle_Y_T01062;Dbxref=GeneID:132344487,GenBank:XM_059884101.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01062;gene_id=Cattle_Y_G00691;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884101.1-2
haplotype2-0000357	CAT	exon	42320138	42320788	.	-	.	ID=Cattle_Y_E01907;Parent=Cattle_Y_T01062;Dbxref=GeneID:132344487,GenBank:XM_059884101.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01062;gene_id=Cattle_Y_G00691;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884101.1-1
haplotype2-0000357	CAT	CDS	42317455	42317478	.	-	0	ID=Cattle_Y_C01541;Parent=Cattle_Y_T01062;Dbxref=GeneID:132344487,GenBank:XP_059740084.1;Name=XP_059740084.1;gbkey=CDS;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740084.1;gene_id=Cattle_Y_G00691;transcript_id=Cattle_Y_T01062;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42318737	42318823	.	-	0	ID=Cattle_Y_C01542;Parent=Cattle_Y_T01062;Dbxref=GeneID:132344487,GenBank:XP_059740084.1;Name=XP_059740084.1;gbkey=CDS;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740084.1;gene_id=Cattle_Y_G00691;transcript_id=Cattle_Y_T01062;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42318943	42319088	.	-	2	ID=Cattle_Y_C01543;Parent=Cattle_Y_T01062;Dbxref=GeneID:132344487,GenBank:XP_059740084.1;Name=XP_059740084.1;gbkey=CDS;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740084.1;gene_id=Cattle_Y_G00691;transcript_id=Cattle_Y_T01062;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42319230	42319341	.	-	0	ID=Cattle_Y_C01544;Parent=Cattle_Y_T01062;Dbxref=GeneID:132344487,GenBank:XP_059740084.1;Name=XP_059740084.1;gbkey=CDS;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740084.1;gene_id=Cattle_Y_G00691;transcript_id=Cattle_Y_T01062;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42320138	42320686	.	-	0	ID=Cattle_Y_C01545;Parent=Cattle_Y_T01062;Dbxref=GeneID:132344487,GenBank:XP_059740084.1;Name=XP_059740084.1;gbkey=CDS;gene=LOC132344487;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740084.1;gene_id=Cattle_Y_G00691;transcript_id=Cattle_Y_T01062;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	42332851	42336380	.	-	.	ID=Cattle_Y_G00692;Dbxref=GeneID:132344488;Name=LOC132344488;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344488;gene_biotype=protein_coding;gene_id=Cattle_Y_G00692;source_id=gene-LOC132344488
haplotype2-0000357	CAT	mRNA	42332851	42336380	.	-	.	ID=Cattle_Y_T01063;Parent=Cattle_Y_G00692;Dbxref=GeneID:132344488,GenBank:XM_059884102.1;Name=XM_059884102.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344488;model_evidence=Supporting evidence includes similarity to: 4 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01063;gene_id=Cattle_Y_G00692;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884102.1
haplotype2-0000357	CAT	exon	42332851	42333070	.	-	.	ID=Cattle_Y_E01908;Parent=Cattle_Y_T01063;Dbxref=GeneID:132344488,GenBank:XM_059884102.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344488;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01063;gene_id=Cattle_Y_G00692;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884102.1-6
haplotype2-0000357	CAT	exon	42334329	42334415	.	-	.	ID=Cattle_Y_E01909;Parent=Cattle_Y_T01063;Dbxref=GeneID:132344488,GenBank:XM_059884102.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344488;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01063;gene_id=Cattle_Y_G00692;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884102.1-6
haplotype2-0000357	CAT	exon	42334535	42334680	.	-	.	ID=Cattle_Y_E01910;Parent=Cattle_Y_T01063;Dbxref=GeneID:132344488,GenBank:XM_059884102.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344488;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01063;gene_id=Cattle_Y_G00692;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884102.1-6
haplotype2-0000357	CAT	exon	42334822	42334933	.	-	.	ID=Cattle_Y_E01911;Parent=Cattle_Y_T01063;Dbxref=GeneID:132344488,GenBank:XM_059884102.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344488;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01063;gene_id=Cattle_Y_G00692;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884102.1-6
haplotype2-0000357	CAT	exon	42335076	42335153	.	-	.	ID=Cattle_Y_E01912;Parent=Cattle_Y_T01063;Dbxref=GeneID:132344488,GenBank:XM_059884102.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344488;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01063;gene_id=Cattle_Y_G00692;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884102.1-6
haplotype2-0000357	CAT	exon	42335751	42336380	.	-	.	ID=Cattle_Y_E01913;Parent=Cattle_Y_T01063;Dbxref=GeneID:132344488,GenBank:XM_059884102.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344488;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01063;gene_id=Cattle_Y_G00692;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884102.1-1
haplotype2-0000357	CAT	CDS	42333047	42333070	.	-	0	ID=Cattle_Y_C01546;Parent=Cattle_Y_T01063;gene_id=Cattle_Y_G00692;transcript_id=Cattle_Y_T01063;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42334329	42334415	.	-	0	ID=Cattle_Y_C01547;Parent=Cattle_Y_T01063;gene_id=Cattle_Y_G00692;transcript_id=Cattle_Y_T01063;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42334535	42334680	.	-	2	ID=Cattle_Y_C01548;Parent=Cattle_Y_T01063;gene_id=Cattle_Y_G00692;transcript_id=Cattle_Y_T01063;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42334822	42334933	.	-	0	ID=Cattle_Y_C01549;Parent=Cattle_Y_T01063;gene_id=Cattle_Y_G00692;transcript_id=Cattle_Y_T01063;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42335076	42335153	.	-	0	ID=Cattle_Y_C01550;Parent=Cattle_Y_T01063;gene_id=Cattle_Y_G00692;transcript_id=Cattle_Y_T01063;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42335751	42336278	.	-	0	ID=Cattle_Y_C01551;Parent=Cattle_Y_T01063;gene_id=Cattle_Y_G00692;transcript_id=Cattle_Y_T01063;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	42740661	42746882	.	-	.	ID=Cattle_Y_G00693;Dbxref=GeneID:132344444;Name=LOC132344444;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344444;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00693;source_id=gene-LOC132344444
haplotype2-0000357	CAT	exon	42740661	42741403	.	-	.	ID=Cattle_Y_T01064;Parent=Cattle_Y_G00693;Dbxref=GeneID:132344444;gbkey=exon;gene=LOC132344444;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00693;transcript_id=Cattle_Y_T01064;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344444
haplotype2-0000357	CAT	exon	42741448	42741813	.	-	.	ID=Cattle_Y_T01065;Parent=Cattle_Y_G00693;Dbxref=GeneID:132344444;gbkey=exon;gene=LOC132344444;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00693;transcript_id=Cattle_Y_T01065;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344444-2
haplotype2-0000357	CAT	exon	42746827	42746882	.	-	.	ID=Cattle_Y_T01066;Parent=Cattle_Y_G00693;Dbxref=GeneID:132344444;gbkey=exon;gene=LOC132344444;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00693;transcript_id=Cattle_Y_T01066;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344444-3
haplotype2-0000357	CAT	gene	42753827	42758906	.	-	.	ID=Cattle_Y_G00694;Dbxref=GeneID:132344486;Name=LOC132344486;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC132344486;gene_biotype=protein_coding;gene_id=Cattle_Y_G00694;source_id=gene-LOC132344486
haplotype2-0000357	CAT	mRNA	42753827	42758906	.	-	.	ID=Cattle_Y_T01067;Parent=Cattle_Y_G00694;Dbxref=GeneID:132344486,GenBank:XM_059884099.1;Name=XM_059884099.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344486;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 15 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01067;gene_id=Cattle_Y_G00694;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884099.1
haplotype2-0000357	CAT	exon	42753827	42754652	.	-	.	ID=Cattle_Y_E01914;Parent=Cattle_Y_T01067;Dbxref=GeneID:132344486,GenBank:XM_059884099.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344486;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01067;gene_id=Cattle_Y_G00694;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884099.1-5
haplotype2-0000357	CAT	exon	42755411	42756013	.	-	.	ID=Cattle_Y_E01915;Parent=Cattle_Y_T01067;Dbxref=GeneID:132344486,GenBank:XM_059884099.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344486;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01067;gene_id=Cattle_Y_G00694;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884099.1-5
haplotype2-0000357	CAT	exon	42756298	42756617	.	-	.	ID=Cattle_Y_E01916;Parent=Cattle_Y_T01067;Dbxref=GeneID:132344486,GenBank:XM_059884099.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344486;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01067;gene_id=Cattle_Y_G00694;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884099.1-5
haplotype2-0000357	CAT	exon	42757977	42758043	.	-	.	ID=Cattle_Y_E01917;Parent=Cattle_Y_T01067;Dbxref=GeneID:132344486,GenBank:XM_059884099.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344486;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01067;gene_id=Cattle_Y_G00694;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884099.1-2
haplotype2-0000357	CAT	exon	42758859	42758906	.	-	.	ID=Cattle_Y_E01918;Parent=Cattle_Y_T01067;Dbxref=GeneID:132344486,GenBank:XM_059884099.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344486;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01067;gene_id=Cattle_Y_G00694;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884099.1-1
haplotype2-0000357	CAT	CDS	42754076	42754652	.	-	1	ID=Cattle_Y_C01552;Parent=Cattle_Y_T01067;gene_id=Cattle_Y_G00694;transcript_id=Cattle_Y_T01067;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42755411	42756013	.	-	1	ID=Cattle_Y_C01553;Parent=Cattle_Y_T01067;gene_id=Cattle_Y_G00694;transcript_id=Cattle_Y_T01067;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42756298	42756617	.	-	0	ID=Cattle_Y_C01554;Parent=Cattle_Y_T01067;gene_id=Cattle_Y_G00694;transcript_id=Cattle_Y_T01067;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42757977	42758012	.	-	0	ID=Cattle_Y_C01555;Parent=Cattle_Y_T01067;gene_id=Cattle_Y_G00694;transcript_id=Cattle_Y_T01067;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	42805720	42815293	.	+	.	ID=Cattle_Y_G00695;Dbxref=GeneID:132344439;Name=LOC132344439;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344439;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00695;source_id=gene-LOC132344439
haplotype2-0000357	CAT	exon	42805720	42806968	.	+	.	ID=Cattle_Y_T01068;Parent=Cattle_Y_G00695;Dbxref=GeneID:132344439;gbkey=exon;gene=LOC132344439;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 75%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00695;transcript_id=Cattle_Y_T01068;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344439
haplotype2-0000357	CAT	exon	42813941	42814104	.	+	.	ID=Cattle_Y_T01069;Parent=Cattle_Y_G00695;Dbxref=GeneID:132344439;gbkey=exon;gene=LOC132344439;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 75%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00695;transcript_id=Cattle_Y_T01069;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344439-2
haplotype2-0000357	CAT	exon	42815156	42815293	.	+	.	ID=Cattle_Y_T01070;Parent=Cattle_Y_G00695;Dbxref=GeneID:132344439;gbkey=exon;gene=LOC132344439;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 75%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00695;transcript_id=Cattle_Y_T01070;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344439-3
haplotype2-0000357	CAT	gene	42816312	42819900	.	-	.	ID=Cattle_Y_G00696;Dbxref=GeneID:132344633;Name=LOC132344633;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344633;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00696;source_id=gene-LOC132344633
haplotype2-0000357	CAT	exon	42816312	42816389	.	-	.	ID=Cattle_Y_T01071;Parent=Cattle_Y_G00696;Dbxref=GeneID:132344633;gbkey=exon;gene=LOC132344633;model_evidence=Supporting evidence includes similarity to: 5 Proteins;pseudo=true;gene_id=Cattle_Y_G00696;transcript_id=Cattle_Y_T01071;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344633
haplotype2-0000357	CAT	exon	42816506	42816651	.	-	.	ID=Cattle_Y_T01072;Parent=Cattle_Y_G00696;Dbxref=GeneID:132344633;gbkey=exon;gene=LOC132344633;model_evidence=Supporting evidence includes similarity to: 5 Proteins;pseudo=true;gene_id=Cattle_Y_G00696;transcript_id=Cattle_Y_T01072;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344633-2
haplotype2-0000357	CAT	exon	42816746	42816851	.	-	.	ID=Cattle_Y_T01073;Parent=Cattle_Y_G00696;Dbxref=GeneID:132344633;gbkey=exon;gene=LOC132344633;model_evidence=Supporting evidence includes similarity to: 5 Proteins;pseudo=true;gene_id=Cattle_Y_G00696;transcript_id=Cattle_Y_T01073;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344633-3
haplotype2-0000357	CAT	exon	42817038	42817115	.	-	.	ID=Cattle_Y_T01074;Parent=Cattle_Y_G00696;Dbxref=GeneID:132344633;gbkey=exon;gene=LOC132344633;model_evidence=Supporting evidence includes similarity to: 5 Proteins;pseudo=true;gene_id=Cattle_Y_G00696;transcript_id=Cattle_Y_T01074;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344633-4
haplotype2-0000357	CAT	exon	42819226	42819648	.	-	.	ID=Cattle_Y_T01075;Parent=Cattle_Y_G00696;Dbxref=GeneID:132344633;gbkey=exon;gene=LOC132344633;model_evidence=Supporting evidence includes similarity to: 5 Proteins;pseudo=true;gene_id=Cattle_Y_G00696;transcript_id=Cattle_Y_T01075;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344633-5
haplotype2-0000357	CAT	exon	42819724	42819900	.	-	.	ID=Cattle_Y_T01076;Parent=Cattle_Y_G00696;Dbxref=GeneID:132344633;gbkey=exon;gene=LOC132344633;model_evidence=Supporting evidence includes similarity to: 5 Proteins;pseudo=true;gene_id=Cattle_Y_G00696;transcript_id=Cattle_Y_T01076;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344633-6
haplotype2-0000357	CAT	gene	42857211	42860851	.	-	.	ID=Cattle_Y_G00697;Dbxref=GeneID:132344491;Name=LOC132344491;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344491;gene_biotype=protein_coding;gene_id=Cattle_Y_G00697;source_id=gene-LOC132344491
haplotype2-0000357	CAT	mRNA	42857211	42860851	.	-	.	ID=Cattle_Y_T01077;Parent=Cattle_Y_G00697;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;Name=XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;model_evidence=Supporting evidence includes similarity to: 2 mRNAs%2C 3 ESTs%2C 14 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T01077;gene_id=Cattle_Y_G00697;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884107.1
haplotype2-0000357	CAT	exon	42857211	42857430	.	-	.	ID=Cattle_Y_E01919;Parent=Cattle_Y_T01077;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01077;gene_id=Cattle_Y_G00697;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884107.1-6
haplotype2-0000357	CAT	exon	42858689	42858775	.	-	.	ID=Cattle_Y_E01920;Parent=Cattle_Y_T01077;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01077;gene_id=Cattle_Y_G00697;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884107.1-5
haplotype2-0000357	CAT	exon	42858895	42859040	.	-	.	ID=Cattle_Y_E01921;Parent=Cattle_Y_T01077;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01077;gene_id=Cattle_Y_G00697;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884107.1-4
haplotype2-0000357	CAT	exon	42859182	42859293	.	-	.	ID=Cattle_Y_E01922;Parent=Cattle_Y_T01077;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01077;gene_id=Cattle_Y_G00697;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884107.1-3
haplotype2-0000357	CAT	exon	42859436	42859513	.	-	.	ID=Cattle_Y_E01923;Parent=Cattle_Y_T01077;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01077;gene_id=Cattle_Y_G00697;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884107.1-2
haplotype2-0000357	CAT	exon	42860107	42860851	.	-	.	ID=Cattle_Y_E01924;Parent=Cattle_Y_T01077;Dbxref=GeneID:132344491,GenBank:XM_059884107.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01077;gene_id=Cattle_Y_G00697;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884107.1-1
haplotype2-0000357	CAT	CDS	42857407	42857430	.	-	0	ID=Cattle_Y_C01556;Parent=Cattle_Y_T01077;Dbxref=GeneID:132344491,GenBank:XP_059740090.1;Name=XP_059740090.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740090.1;gene_id=Cattle_Y_G00697;transcript_id=Cattle_Y_T01077;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42858689	42858775	.	-	0	ID=Cattle_Y_C01557;Parent=Cattle_Y_T01077;Dbxref=GeneID:132344491,GenBank:XP_059740090.1;Name=XP_059740090.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740090.1;gene_id=Cattle_Y_G00697;transcript_id=Cattle_Y_T01077;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42858895	42859040	.	-	2	ID=Cattle_Y_C01558;Parent=Cattle_Y_T01077;Dbxref=GeneID:132344491,GenBank:XP_059740090.1;Name=XP_059740090.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740090.1;gene_id=Cattle_Y_G00697;transcript_id=Cattle_Y_T01077;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42859182	42859293	.	-	0	ID=Cattle_Y_C01559;Parent=Cattle_Y_T01077;Dbxref=GeneID:132344491,GenBank:XP_059740090.1;Name=XP_059740090.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740090.1;gene_id=Cattle_Y_G00697;transcript_id=Cattle_Y_T01077;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42859436	42859513	.	-	0	ID=Cattle_Y_C01560;Parent=Cattle_Y_T01077;Dbxref=GeneID:132344491,GenBank:XP_059740090.1;Name=XP_059740090.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740090.1;gene_id=Cattle_Y_G00697;transcript_id=Cattle_Y_T01077;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42860107	42860634	.	-	0	ID=Cattle_Y_C01561;Parent=Cattle_Y_T01077;Dbxref=GeneID:132344491,GenBank:XP_059740090.1;Name=XP_059740090.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740090.1;gene_id=Cattle_Y_G00697;transcript_id=Cattle_Y_T01077;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	42857211	42860851	.	-	.	ID=Cattle_Y_T01078;Parent=Cattle_Y_G00697;Dbxref=GeneID:132344491,GenBank:XM_059884108.1;Name=XM_059884108.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T01078;gene_id=Cattle_Y_G00697;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884108.1
haplotype2-0000357	CAT	exon	42857211	42857430	.	-	.	ID=Cattle_Y_E01925;Parent=Cattle_Y_T01078;Dbxref=GeneID:132344491,GenBank:XM_059884108.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01078;gene_id=Cattle_Y_G00697;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884108.1-5
haplotype2-0000357	CAT	exon	42858689	42858775	.	-	.	ID=Cattle_Y_E01926;Parent=Cattle_Y_T01078;Dbxref=GeneID:132344491,GenBank:XM_059884108.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01078;gene_id=Cattle_Y_G00697;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884108.1-4
haplotype2-0000357	CAT	exon	42858895	42859040	.	-	.	ID=Cattle_Y_E01927;Parent=Cattle_Y_T01078;Dbxref=GeneID:132344491,GenBank:XM_059884108.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01078;gene_id=Cattle_Y_G00697;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884108.1-3
haplotype2-0000357	CAT	exon	42859182	42859293	.	-	.	ID=Cattle_Y_E01928;Parent=Cattle_Y_T01078;Dbxref=GeneID:132344491,GenBank:XM_059884108.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01078;gene_id=Cattle_Y_G00697;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884108.1-2
haplotype2-0000357	CAT	exon	42860086	42860851	.	-	.	ID=Cattle_Y_E01929;Parent=Cattle_Y_T01078;Dbxref=GeneID:132344491,GenBank:XM_059884108.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01078;gene_id=Cattle_Y_G00697;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884108.1-1
haplotype2-0000357	CAT	CDS	42857407	42857430	.	-	0	ID=Cattle_Y_C01562;Parent=Cattle_Y_T01078;Dbxref=GeneID:132344491,GenBank:XP_059740091.1;Name=XP_059740091.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740091.1;gene_id=Cattle_Y_G00697;transcript_id=Cattle_Y_T01078;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42858689	42858775	.	-	0	ID=Cattle_Y_C01563;Parent=Cattle_Y_T01078;Dbxref=GeneID:132344491,GenBank:XP_059740091.1;Name=XP_059740091.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740091.1;gene_id=Cattle_Y_G00697;transcript_id=Cattle_Y_T01078;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42858895	42859040	.	-	2	ID=Cattle_Y_C01564;Parent=Cattle_Y_T01078;Dbxref=GeneID:132344491,GenBank:XP_059740091.1;Name=XP_059740091.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740091.1;gene_id=Cattle_Y_G00697;transcript_id=Cattle_Y_T01078;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42859182	42859293	.	-	0	ID=Cattle_Y_C01565;Parent=Cattle_Y_T01078;Dbxref=GeneID:132344491,GenBank:XP_059740091.1;Name=XP_059740091.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740091.1;gene_id=Cattle_Y_G00697;transcript_id=Cattle_Y_T01078;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42860086	42860634	.	-	0	ID=Cattle_Y_C01566;Parent=Cattle_Y_T01078;Dbxref=GeneID:132344491,GenBank:XP_059740091.1;Name=XP_059740091.1;gbkey=CDS;gene=LOC132344491;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740091.1;gene_id=Cattle_Y_G00697;transcript_id=Cattle_Y_T01078;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	42872912	42876552	.	-	.	ID=Cattle_Y_G00698;Dbxref=GeneID:132344492;Name=LOC132344492;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344492;gene_biotype=protein_coding;gene_id=Cattle_Y_G00698;source_id=gene-LOC132344492
haplotype2-0000357	CAT	mRNA	42872912	42876552	.	-	.	ID=Cattle_Y_T01079;Parent=Cattle_Y_G00698;Dbxref=GeneID:132344492,GenBank:XM_059884109.1;Name=XM_059884109.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344492;model_evidence=Supporting evidence includes similarity to: 3 ESTs%2C 5 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T01079;gene_id=Cattle_Y_G00698;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884109.1
haplotype2-0000357	CAT	exon	42872912	42873131	.	-	.	ID=Cattle_Y_E01930;Parent=Cattle_Y_T01079;Dbxref=GeneID:132344492,GenBank:XM_059884109.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344492;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01079;gene_id=Cattle_Y_G00698;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884109.1-6
haplotype2-0000357	CAT	exon	42874390	42874476	.	-	.	ID=Cattle_Y_E01931;Parent=Cattle_Y_T01079;Dbxref=GeneID:132344492,GenBank:XM_059884109.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344492;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01079;gene_id=Cattle_Y_G00698;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884109.1-5
haplotype2-0000357	CAT	exon	42874596	42874741	.	-	.	ID=Cattle_Y_E01932;Parent=Cattle_Y_T01079;Dbxref=GeneID:132344492,GenBank:XM_059884109.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344492;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01079;gene_id=Cattle_Y_G00698;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884109.1-4
haplotype2-0000357	CAT	exon	42874883	42874994	.	-	.	ID=Cattle_Y_E01933;Parent=Cattle_Y_T01079;Dbxref=GeneID:132344492,GenBank:XM_059884109.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344492;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01079;gene_id=Cattle_Y_G00698;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884109.1-3
haplotype2-0000357	CAT	exon	42875137	42875214	.	-	.	ID=Cattle_Y_E01934;Parent=Cattle_Y_T01079;Dbxref=GeneID:132344492,GenBank:XM_059884109.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344492;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01079;gene_id=Cattle_Y_G00698;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884109.1-2
haplotype2-0000357	CAT	exon	42875808	42876552	.	-	.	ID=Cattle_Y_E01935;Parent=Cattle_Y_T01079;Dbxref=GeneID:132344492,GenBank:XM_059884109.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344492;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01079;gene_id=Cattle_Y_G00698;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884109.1-1
haplotype2-0000357	CAT	CDS	42873108	42873131	.	-	0	ID=Cattle_Y_C01567;Parent=Cattle_Y_T01079;Dbxref=GeneID:132344492,GenBank:XP_059740092.1;Name=XP_059740092.1;gbkey=CDS;gene=LOC132344492;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740092.1;gene_id=Cattle_Y_G00698;transcript_id=Cattle_Y_T01079;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42874390	42874476	.	-	0	ID=Cattle_Y_C01568;Parent=Cattle_Y_T01079;Dbxref=GeneID:132344492,GenBank:XP_059740092.1;Name=XP_059740092.1;gbkey=CDS;gene=LOC132344492;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740092.1;gene_id=Cattle_Y_G00698;transcript_id=Cattle_Y_T01079;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42874596	42874741	.	-	2	ID=Cattle_Y_C01569;Parent=Cattle_Y_T01079;Dbxref=GeneID:132344492,GenBank:XP_059740092.1;Name=XP_059740092.1;gbkey=CDS;gene=LOC132344492;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740092.1;gene_id=Cattle_Y_G00698;transcript_id=Cattle_Y_T01079;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42874883	42874994	.	-	0	ID=Cattle_Y_C01570;Parent=Cattle_Y_T01079;Dbxref=GeneID:132344492,GenBank:XP_059740092.1;Name=XP_059740092.1;gbkey=CDS;gene=LOC132344492;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740092.1;gene_id=Cattle_Y_G00698;transcript_id=Cattle_Y_T01079;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42875137	42875214	.	-	0	ID=Cattle_Y_C01571;Parent=Cattle_Y_T01079;Dbxref=GeneID:132344492,GenBank:XP_059740092.1;Name=XP_059740092.1;gbkey=CDS;gene=LOC132344492;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740092.1;gene_id=Cattle_Y_G00698;transcript_id=Cattle_Y_T01079;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42875808	42876335	.	-	0	ID=Cattle_Y_C01572;Parent=Cattle_Y_T01079;Dbxref=GeneID:132344492,GenBank:XP_059740092.1;Name=XP_059740092.1;gbkey=CDS;gene=LOC132344492;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740092.1;gene_id=Cattle_Y_G00698;transcript_id=Cattle_Y_T01079;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	42872912	42876552	.	-	.	ID=Cattle_Y_T01080;Parent=Cattle_Y_G00698;Dbxref=GeneID:132344492,GenBank:XM_059884110.1;Name=XM_059884110.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344492;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T01080;gene_id=Cattle_Y_G00698;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884110.1
haplotype2-0000357	CAT	exon	42872912	42873131	.	-	.	ID=Cattle_Y_E01936;Parent=Cattle_Y_T01080;Dbxref=GeneID:132344492,GenBank:XM_059884110.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344492;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01080;gene_id=Cattle_Y_G00698;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884110.1-5
haplotype2-0000357	CAT	exon	42874390	42874476	.	-	.	ID=Cattle_Y_E01937;Parent=Cattle_Y_T01080;Dbxref=GeneID:132344492,GenBank:XM_059884110.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344492;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01080;gene_id=Cattle_Y_G00698;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884110.1-4
haplotype2-0000357	CAT	exon	42874596	42874741	.	-	.	ID=Cattle_Y_E01938;Parent=Cattle_Y_T01080;Dbxref=GeneID:132344492,GenBank:XM_059884110.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344492;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01080;gene_id=Cattle_Y_G00698;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884110.1-3
haplotype2-0000357	CAT	exon	42874883	42874994	.	-	.	ID=Cattle_Y_E01939;Parent=Cattle_Y_T01080;Dbxref=GeneID:132344492,GenBank:XM_059884110.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344492;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01080;gene_id=Cattle_Y_G00698;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884110.1-2
haplotype2-0000357	CAT	exon	42875787	42876552	.	-	.	ID=Cattle_Y_E01940;Parent=Cattle_Y_T01080;Dbxref=GeneID:132344492,GenBank:XM_059884110.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344492;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01080;gene_id=Cattle_Y_G00698;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884110.1-1
haplotype2-0000357	CAT	CDS	42873108	42873131	.	-	0	ID=Cattle_Y_C01573;Parent=Cattle_Y_T01080;Dbxref=GeneID:132344492,GenBank:XP_059740093.1;Name=XP_059740093.1;gbkey=CDS;gene=LOC132344492;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740093.1;gene_id=Cattle_Y_G00698;transcript_id=Cattle_Y_T01080;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42874390	42874476	.	-	0	ID=Cattle_Y_C01574;Parent=Cattle_Y_T01080;Dbxref=GeneID:132344492,GenBank:XP_059740093.1;Name=XP_059740093.1;gbkey=CDS;gene=LOC132344492;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740093.1;gene_id=Cattle_Y_G00698;transcript_id=Cattle_Y_T01080;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42874596	42874741	.	-	2	ID=Cattle_Y_C01575;Parent=Cattle_Y_T01080;Dbxref=GeneID:132344492,GenBank:XP_059740093.1;Name=XP_059740093.1;gbkey=CDS;gene=LOC132344492;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740093.1;gene_id=Cattle_Y_G00698;transcript_id=Cattle_Y_T01080;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42874883	42874994	.	-	0	ID=Cattle_Y_C01576;Parent=Cattle_Y_T01080;Dbxref=GeneID:132344492,GenBank:XP_059740093.1;Name=XP_059740093.1;gbkey=CDS;gene=LOC132344492;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740093.1;gene_id=Cattle_Y_G00698;transcript_id=Cattle_Y_T01080;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42875787	42876335	.	-	0	ID=Cattle_Y_C01577;Parent=Cattle_Y_T01080;Dbxref=GeneID:132344492,GenBank:XP_059740093.1;Name=XP_059740093.1;gbkey=CDS;gene=LOC132344492;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740093.1;gene_id=Cattle_Y_G00698;transcript_id=Cattle_Y_T01080;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	42888618	42892258	.	-	.	ID=Cattle_Y_G00699;Dbxref=GeneID:132344493;Name=LOC132344493;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344493;gene_biotype=protein_coding;gene_id=Cattle_Y_G00699;source_id=gene-LOC132344493
haplotype2-0000357	CAT	mRNA	42888618	42892258	.	-	.	ID=Cattle_Y_T01081;Parent=Cattle_Y_G00699;Dbxref=GeneID:132344493,GenBank:XM_059884111.1;Name=XM_059884111.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344493;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 5 Proteins%2C 1 long SRA read%2C and 99%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T01081;gene_id=Cattle_Y_G00699;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884111.1
haplotype2-0000357	CAT	exon	42888618	42888837	.	-	.	ID=Cattle_Y_E01941;Parent=Cattle_Y_T01081;Dbxref=GeneID:132344493,GenBank:XM_059884111.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344493;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01081;gene_id=Cattle_Y_G00699;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884111.1-6
haplotype2-0000357	CAT	exon	42890096	42890182	.	-	.	ID=Cattle_Y_E01942;Parent=Cattle_Y_T01081;Dbxref=GeneID:132344493,GenBank:XM_059884111.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344493;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01081;gene_id=Cattle_Y_G00699;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884111.1-6
haplotype2-0000357	CAT	exon	42890302	42890447	.	-	.	ID=Cattle_Y_E01943;Parent=Cattle_Y_T01081;Dbxref=GeneID:132344493,GenBank:XM_059884111.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344493;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01081;gene_id=Cattle_Y_G00699;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884111.1-6
haplotype2-0000357	CAT	exon	42890589	42890700	.	-	.	ID=Cattle_Y_E01944;Parent=Cattle_Y_T01081;Dbxref=GeneID:132344493,GenBank:XM_059884111.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344493;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01081;gene_id=Cattle_Y_G00699;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884111.1-6
haplotype2-0000357	CAT	exon	42890843	42890920	.	-	.	ID=Cattle_Y_E01945;Parent=Cattle_Y_T01081;Dbxref=GeneID:132344493,GenBank:XM_059884111.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344493;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01081;gene_id=Cattle_Y_G00699;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884111.1-6
haplotype2-0000357	CAT	exon	42891514	42892258	.	-	.	ID=Cattle_Y_E01946;Parent=Cattle_Y_T01081;Dbxref=GeneID:132344493,GenBank:XM_059884111.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344493;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01081;gene_id=Cattle_Y_G00699;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884111.1-1
haplotype2-0000357	CAT	CDS	42888814	42888837	.	-	0	ID=Cattle_Y_C01578;Parent=Cattle_Y_T01081;gene_id=Cattle_Y_G00699;transcript_id=Cattle_Y_T01081;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42890096	42890182	.	-	0	ID=Cattle_Y_C01579;Parent=Cattle_Y_T01081;gene_id=Cattle_Y_G00699;transcript_id=Cattle_Y_T01081;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42890302	42890447	.	-	2	ID=Cattle_Y_C01580;Parent=Cattle_Y_T01081;gene_id=Cattle_Y_G00699;transcript_id=Cattle_Y_T01081;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42890589	42890700	.	-	0	ID=Cattle_Y_C01581;Parent=Cattle_Y_T01081;gene_id=Cattle_Y_G00699;transcript_id=Cattle_Y_T01081;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42890843	42890920	.	-	0	ID=Cattle_Y_C01582;Parent=Cattle_Y_T01081;gene_id=Cattle_Y_G00699;transcript_id=Cattle_Y_T01081;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42891514	42892041	.	-	0	ID=Cattle_Y_C01583;Parent=Cattle_Y_T01081;gene_id=Cattle_Y_G00699;transcript_id=Cattle_Y_T01081;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	42888618	42891959	.	-	.	ID=Cattle_Y_T01082;Parent=Cattle_Y_G00699;Dbxref=GeneID:132344493,GenBank:XM_059884112.1;Name=XM_059884112.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344493;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T01082;gene_id=Cattle_Y_G00699;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884112.1
haplotype2-0000357	CAT	exon	42888618	42888837	.	-	.	ID=Cattle_Y_E01947;Parent=Cattle_Y_T01082;Dbxref=GeneID:132344493,GenBank:XM_059884112.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344493;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01082;gene_id=Cattle_Y_G00699;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884112.1-5
haplotype2-0000357	CAT	exon	42890096	42890182	.	-	.	ID=Cattle_Y_E01948;Parent=Cattle_Y_T01082;Dbxref=GeneID:132344493,GenBank:XM_059884112.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344493;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01082;gene_id=Cattle_Y_G00699;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884112.1-4
haplotype2-0000357	CAT	exon	42890302	42890447	.	-	.	ID=Cattle_Y_E01949;Parent=Cattle_Y_T01082;Dbxref=GeneID:132344493,GenBank:XM_059884112.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344493;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01082;gene_id=Cattle_Y_G00699;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884112.1-3
haplotype2-0000357	CAT	exon	42890589	42890700	.	-	.	ID=Cattle_Y_E01950;Parent=Cattle_Y_T01082;Dbxref=GeneID:132344493,GenBank:XM_059884112.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344493;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01082;gene_id=Cattle_Y_G00699;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884112.1-2
haplotype2-0000357	CAT	exon	42891493	42891959	.	-	.	ID=Cattle_Y_E01951;Parent=Cattle_Y_T01082;Dbxref=GeneID:132344493,GenBank:XM_059884112.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344493;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01082;gene_id=Cattle_Y_G00699;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884112.1-1
haplotype2-0000357	CAT	CDS	42888814	42888837	.	-	0	ID=Cattle_Y_C01584;Parent=Cattle_Y_T01082;Dbxref=GeneID:132344493,GenBank:XP_059740095.1;Name=XP_059740095.1;gbkey=CDS;gene=LOC132344493;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740095.1;gene_id=Cattle_Y_G00699;transcript_id=Cattle_Y_T01082;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42890096	42890182	.	-	0	ID=Cattle_Y_C01585;Parent=Cattle_Y_T01082;Dbxref=GeneID:132344493,GenBank:XP_059740095.1;Name=XP_059740095.1;gbkey=CDS;gene=LOC132344493;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740095.1;gene_id=Cattle_Y_G00699;transcript_id=Cattle_Y_T01082;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42890302	42890447	.	-	2	ID=Cattle_Y_C01586;Parent=Cattle_Y_T01082;Dbxref=GeneID:132344493,GenBank:XP_059740095.1;Name=XP_059740095.1;gbkey=CDS;gene=LOC132344493;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740095.1;gene_id=Cattle_Y_G00699;transcript_id=Cattle_Y_T01082;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42890589	42890700	.	-	0	ID=Cattle_Y_C01587;Parent=Cattle_Y_T01082;Dbxref=GeneID:132344493,GenBank:XP_059740095.1;Name=XP_059740095.1;gbkey=CDS;gene=LOC132344493;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740095.1;gene_id=Cattle_Y_G00699;transcript_id=Cattle_Y_T01082;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42891493	42891915	.	-	0	ID=Cattle_Y_C01588;Parent=Cattle_Y_T01082;Dbxref=GeneID:132344493,GenBank:XP_059740095.1;Name=XP_059740095.1;gbkey=CDS;gene=LOC132344493;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740095.1;gene_id=Cattle_Y_G00699;transcript_id=Cattle_Y_T01082;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	42904317	42907968	.	-	.	ID=Cattle_Y_G00700;Dbxref=GeneID:132344507;Name=LOC132344507;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344507;gene_biotype=protein_coding;gene_id=Cattle_Y_G00700;source_id=gene-LOC132344507
haplotype2-0000357	CAT	mRNA	42904317	42907966	.	-	.	ID=Cattle_Y_T01083;Parent=Cattle_Y_G00700;Dbxref=GeneID:132344507,GenBank:XM_059884137.1;Name=XM_059884137.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344507;model_evidence=Supporting evidence includes similarity to: 4 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T01083;gene_id=Cattle_Y_G00700;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884137.1
haplotype2-0000357	CAT	exon	42904317	42904536	.	-	.	ID=Cattle_Y_E01952;Parent=Cattle_Y_T01083;Dbxref=GeneID:132344507,GenBank:XM_059884137.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344507;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01083;gene_id=Cattle_Y_G00700;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884137.1-6
haplotype2-0000357	CAT	exon	42905795	42905881	.	-	.	ID=Cattle_Y_E01953;Parent=Cattle_Y_T01083;Dbxref=GeneID:132344507,GenBank:XM_059884137.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344507;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01083;gene_id=Cattle_Y_G00700;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884137.1-6
haplotype2-0000357	CAT	exon	42906001	42906146	.	-	.	ID=Cattle_Y_E01954;Parent=Cattle_Y_T01083;Dbxref=GeneID:132344507,GenBank:XM_059884137.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344507;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01083;gene_id=Cattle_Y_G00700;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884137.1-6
haplotype2-0000357	CAT	exon	42906288	42906399	.	-	.	ID=Cattle_Y_E01955;Parent=Cattle_Y_T01083;Dbxref=GeneID:132344507,GenBank:XM_059884137.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344507;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01083;gene_id=Cattle_Y_G00700;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884137.1-6
haplotype2-0000357	CAT	exon	42906542	42906619	.	-	.	ID=Cattle_Y_E01956;Parent=Cattle_Y_T01083;Dbxref=GeneID:132344507,GenBank:XM_059884137.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344507;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01083;gene_id=Cattle_Y_G00700;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884137.1-6
haplotype2-0000357	CAT	exon	42907213	42907966	.	-	.	ID=Cattle_Y_E01957;Parent=Cattle_Y_T01083;Dbxref=GeneID:132344507,GenBank:XM_059884137.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344507;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01083;gene_id=Cattle_Y_G00700;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884137.1-1
haplotype2-0000357	CAT	CDS	42904513	42904536	.	-	0	ID=Cattle_Y_C01589;Parent=Cattle_Y_T01083;gene_id=Cattle_Y_G00700;transcript_id=Cattle_Y_T01083;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42905795	42905881	.	-	0	ID=Cattle_Y_C01590;Parent=Cattle_Y_T01083;gene_id=Cattle_Y_G00700;transcript_id=Cattle_Y_T01083;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42906001	42906146	.	-	2	ID=Cattle_Y_C01591;Parent=Cattle_Y_T01083;gene_id=Cattle_Y_G00700;transcript_id=Cattle_Y_T01083;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42906288	42906399	.	-	0	ID=Cattle_Y_C01592;Parent=Cattle_Y_T01083;gene_id=Cattle_Y_G00700;transcript_id=Cattle_Y_T01083;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42906542	42906619	.	-	0	ID=Cattle_Y_C01593;Parent=Cattle_Y_T01083;gene_id=Cattle_Y_G00700;transcript_id=Cattle_Y_T01083;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42907213	42907740	.	-	0	ID=Cattle_Y_C01594;Parent=Cattle_Y_T01083;gene_id=Cattle_Y_G00700;transcript_id=Cattle_Y_T01083;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	42904317	42907968	.	-	.	ID=Cattle_Y_T01084;Parent=Cattle_Y_G00700;Dbxref=GeneID:132344507,GenBank:XM_059884138.1;Name=XM_059884138.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344507;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T01084;gene_id=Cattle_Y_G00700;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884138.1
haplotype2-0000357	CAT	exon	42904317	42904536	.	-	.	ID=Cattle_Y_E01958;Parent=Cattle_Y_T01084;Dbxref=GeneID:132344507,GenBank:XM_059884138.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344507;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01084;gene_id=Cattle_Y_G00700;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884138.1-5
haplotype2-0000357	CAT	exon	42905795	42905881	.	-	.	ID=Cattle_Y_E01959;Parent=Cattle_Y_T01084;Dbxref=GeneID:132344507,GenBank:XM_059884138.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344507;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01084;gene_id=Cattle_Y_G00700;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884138.1-5
haplotype2-0000357	CAT	exon	42906001	42906146	.	-	.	ID=Cattle_Y_E01960;Parent=Cattle_Y_T01084;Dbxref=GeneID:132344507,GenBank:XM_059884138.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344507;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01084;gene_id=Cattle_Y_G00700;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884138.1-5
haplotype2-0000357	CAT	exon	42906288	42906399	.	-	.	ID=Cattle_Y_E01961;Parent=Cattle_Y_T01084;Dbxref=GeneID:132344507,GenBank:XM_059884138.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344507;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01084;gene_id=Cattle_Y_G00700;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884138.1-5
haplotype2-0000357	CAT	exon	42907192	42907968	.	-	.	ID=Cattle_Y_E01962;Parent=Cattle_Y_T01084;Dbxref=GeneID:132344507,GenBank:XM_059884138.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344507;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01084;gene_id=Cattle_Y_G00700;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884138.1-1
haplotype2-0000357	CAT	CDS	42904513	42904536	.	-	0	ID=Cattle_Y_C01595;Parent=Cattle_Y_T01084;gene_id=Cattle_Y_G00700;transcript_id=Cattle_Y_T01084;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42905795	42905881	.	-	0	ID=Cattle_Y_C01596;Parent=Cattle_Y_T01084;gene_id=Cattle_Y_G00700;transcript_id=Cattle_Y_T01084;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42906001	42906146	.	-	2	ID=Cattle_Y_C01597;Parent=Cattle_Y_T01084;gene_id=Cattle_Y_G00700;transcript_id=Cattle_Y_T01084;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42906288	42906399	.	-	0	ID=Cattle_Y_C01598;Parent=Cattle_Y_T01084;gene_id=Cattle_Y_G00700;transcript_id=Cattle_Y_T01084;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42907192	42907740	.	-	0	ID=Cattle_Y_C01599;Parent=Cattle_Y_T01084;gene_id=Cattle_Y_G00700;transcript_id=Cattle_Y_T01084;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	42920006	42923646	.	-	.	ID=Cattle_Y_G00701;Dbxref=GeneID:132344494;Name=LOC132344494;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344494;gene_biotype=protein_coding;gene_id=Cattle_Y_G00701;source_id=gene-LOC132344494
haplotype2-0000357	CAT	mRNA	42920006	42923646	.	-	.	ID=Cattle_Y_T01085;Parent=Cattle_Y_G00701;Dbxref=GeneID:132344494,GenBank:XM_059884113.1;Name=XM_059884113.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344494;model_evidence=Supporting evidence includes similarity to: 3 ESTs%2C 5 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T01085;gene_id=Cattle_Y_G00701;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884113.1
haplotype2-0000357	CAT	exon	42920006	42920225	.	-	.	ID=Cattle_Y_E01963;Parent=Cattle_Y_T01085;Dbxref=GeneID:132344494,GenBank:XM_059884113.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344494;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01085;gene_id=Cattle_Y_G00701;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884113.1-6
haplotype2-0000357	CAT	exon	42921484	42921570	.	-	.	ID=Cattle_Y_E01964;Parent=Cattle_Y_T01085;Dbxref=GeneID:132344494,GenBank:XM_059884113.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344494;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01085;gene_id=Cattle_Y_G00701;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884113.1-5
haplotype2-0000357	CAT	exon	42921690	42921835	.	-	.	ID=Cattle_Y_E01965;Parent=Cattle_Y_T01085;Dbxref=GeneID:132344494,GenBank:XM_059884113.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344494;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01085;gene_id=Cattle_Y_G00701;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884113.1-4
haplotype2-0000357	CAT	exon	42921977	42922088	.	-	.	ID=Cattle_Y_E01966;Parent=Cattle_Y_T01085;Dbxref=GeneID:132344494,GenBank:XM_059884113.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344494;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01085;gene_id=Cattle_Y_G00701;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884113.1-3
haplotype2-0000357	CAT	exon	42922231	42922308	.	-	.	ID=Cattle_Y_E01967;Parent=Cattle_Y_T01085;Dbxref=GeneID:132344494,GenBank:XM_059884113.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344494;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01085;gene_id=Cattle_Y_G00701;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884113.1-2
haplotype2-0000357	CAT	exon	42922902	42923646	.	-	.	ID=Cattle_Y_E01968;Parent=Cattle_Y_T01085;Dbxref=GeneID:132344494,GenBank:XM_059884113.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344494;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01085;gene_id=Cattle_Y_G00701;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884113.1-1
haplotype2-0000357	CAT	CDS	42920202	42920225	.	-	0	ID=Cattle_Y_C01600;Parent=Cattle_Y_T01085;Dbxref=GeneID:132344494,GenBank:XP_059740096.1;Name=XP_059740096.1;gbkey=CDS;gene=LOC132344494;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740096.1;gene_id=Cattle_Y_G00701;transcript_id=Cattle_Y_T01085;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42921484	42921570	.	-	0	ID=Cattle_Y_C01601;Parent=Cattle_Y_T01085;Dbxref=GeneID:132344494,GenBank:XP_059740096.1;Name=XP_059740096.1;gbkey=CDS;gene=LOC132344494;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740096.1;gene_id=Cattle_Y_G00701;transcript_id=Cattle_Y_T01085;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42921690	42921835	.	-	2	ID=Cattle_Y_C01602;Parent=Cattle_Y_T01085;Dbxref=GeneID:132344494,GenBank:XP_059740096.1;Name=XP_059740096.1;gbkey=CDS;gene=LOC132344494;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740096.1;gene_id=Cattle_Y_G00701;transcript_id=Cattle_Y_T01085;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42921977	42922088	.	-	0	ID=Cattle_Y_C01603;Parent=Cattle_Y_T01085;Dbxref=GeneID:132344494,GenBank:XP_059740096.1;Name=XP_059740096.1;gbkey=CDS;gene=LOC132344494;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740096.1;gene_id=Cattle_Y_G00701;transcript_id=Cattle_Y_T01085;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42922231	42922308	.	-	0	ID=Cattle_Y_C01604;Parent=Cattle_Y_T01085;Dbxref=GeneID:132344494,GenBank:XP_059740096.1;Name=XP_059740096.1;gbkey=CDS;gene=LOC132344494;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740096.1;gene_id=Cattle_Y_G00701;transcript_id=Cattle_Y_T01085;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42922902	42923429	.	-	0	ID=Cattle_Y_C01605;Parent=Cattle_Y_T01085;Dbxref=GeneID:132344494,GenBank:XP_059740096.1;Name=XP_059740096.1;gbkey=CDS;gene=LOC132344494;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740096.1;gene_id=Cattle_Y_G00701;transcript_id=Cattle_Y_T01085;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	42920006	42923646	.	-	.	ID=Cattle_Y_T01086;Parent=Cattle_Y_G00701;Dbxref=GeneID:132344494,GenBank:XM_059884114.1;Name=XM_059884114.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344494;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T01086;gene_id=Cattle_Y_G00701;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884114.1
haplotype2-0000357	CAT	exon	42920006	42920225	.	-	.	ID=Cattle_Y_E01969;Parent=Cattle_Y_T01086;Dbxref=GeneID:132344494,GenBank:XM_059884114.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344494;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01086;gene_id=Cattle_Y_G00701;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884114.1-5
haplotype2-0000357	CAT	exon	42921484	42921570	.	-	.	ID=Cattle_Y_E01970;Parent=Cattle_Y_T01086;Dbxref=GeneID:132344494,GenBank:XM_059884114.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344494;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01086;gene_id=Cattle_Y_G00701;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884114.1-4
haplotype2-0000357	CAT	exon	42921690	42921835	.	-	.	ID=Cattle_Y_E01971;Parent=Cattle_Y_T01086;Dbxref=GeneID:132344494,GenBank:XM_059884114.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344494;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01086;gene_id=Cattle_Y_G00701;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884114.1-3
haplotype2-0000357	CAT	exon	42921977	42922088	.	-	.	ID=Cattle_Y_E01972;Parent=Cattle_Y_T01086;Dbxref=GeneID:132344494,GenBank:XM_059884114.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344494;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01086;gene_id=Cattle_Y_G00701;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884114.1-2
haplotype2-0000357	CAT	exon	42922881	42923646	.	-	.	ID=Cattle_Y_E01973;Parent=Cattle_Y_T01086;Dbxref=GeneID:132344494,GenBank:XM_059884114.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344494;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01086;gene_id=Cattle_Y_G00701;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884114.1-1
haplotype2-0000357	CAT	CDS	42920202	42920225	.	-	0	ID=Cattle_Y_C01606;Parent=Cattle_Y_T01086;Dbxref=GeneID:132344494,GenBank:XP_059740097.1;Name=XP_059740097.1;gbkey=CDS;gene=LOC132344494;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740097.1;gene_id=Cattle_Y_G00701;transcript_id=Cattle_Y_T01086;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42921484	42921570	.	-	0	ID=Cattle_Y_C01607;Parent=Cattle_Y_T01086;Dbxref=GeneID:132344494,GenBank:XP_059740097.1;Name=XP_059740097.1;gbkey=CDS;gene=LOC132344494;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740097.1;gene_id=Cattle_Y_G00701;transcript_id=Cattle_Y_T01086;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42921690	42921835	.	-	2	ID=Cattle_Y_C01608;Parent=Cattle_Y_T01086;Dbxref=GeneID:132344494,GenBank:XP_059740097.1;Name=XP_059740097.1;gbkey=CDS;gene=LOC132344494;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740097.1;gene_id=Cattle_Y_G00701;transcript_id=Cattle_Y_T01086;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42921977	42922088	.	-	0	ID=Cattle_Y_C01609;Parent=Cattle_Y_T01086;Dbxref=GeneID:132344494,GenBank:XP_059740097.1;Name=XP_059740097.1;gbkey=CDS;gene=LOC132344494;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740097.1;gene_id=Cattle_Y_G00701;transcript_id=Cattle_Y_T01086;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42922881	42923429	.	-	0	ID=Cattle_Y_C01610;Parent=Cattle_Y_T01086;Dbxref=GeneID:132344494,GenBank:XP_059740097.1;Name=XP_059740097.1;gbkey=CDS;gene=LOC132344494;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740097.1;gene_id=Cattle_Y_G00701;transcript_id=Cattle_Y_T01086;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	42935705	42939130	.	-	.	ID=Cattle_Y_G00702;Dbxref=GeneID:132344495;Name=LOC132344495;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344495;gene_biotype=protein_coding;gene_id=Cattle_Y_G00702;source_id=gene-LOC132344495
haplotype2-0000357	CAT	mRNA	42935705	42939130	.	-	.	ID=Cattle_Y_T01087;Parent=Cattle_Y_G00702;Dbxref=GeneID:132344495,GenBank:XM_059884115.1;Name=XM_059884115.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344495;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 5 Proteins%2C 2 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T01087;gene_id=Cattle_Y_G00702;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884115.1
haplotype2-0000357	CAT	exon	42935705	42935924	.	-	.	ID=Cattle_Y_E01974;Parent=Cattle_Y_T01087;Dbxref=GeneID:132344495,GenBank:XM_059884115.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344495;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01087;gene_id=Cattle_Y_G00702;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884115.1-6
haplotype2-0000357	CAT	exon	42937183	42937269	.	-	.	ID=Cattle_Y_E01975;Parent=Cattle_Y_T01087;Dbxref=GeneID:132344495,GenBank:XM_059884115.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344495;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01087;gene_id=Cattle_Y_G00702;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884115.1-5
haplotype2-0000357	CAT	exon	42937389	42937534	.	-	.	ID=Cattle_Y_E01976;Parent=Cattle_Y_T01087;Dbxref=GeneID:132344495,GenBank:XM_059884115.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344495;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01087;gene_id=Cattle_Y_G00702;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884115.1-4
haplotype2-0000357	CAT	exon	42937676	42937787	.	-	.	ID=Cattle_Y_E01977;Parent=Cattle_Y_T01087;Dbxref=GeneID:132344495,GenBank:XM_059884115.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344495;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01087;gene_id=Cattle_Y_G00702;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884115.1-3
haplotype2-0000357	CAT	exon	42937930	42938007	.	-	.	ID=Cattle_Y_E01978;Parent=Cattle_Y_T01087;Dbxref=GeneID:132344495,GenBank:XM_059884115.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344495;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01087;gene_id=Cattle_Y_G00702;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884115.1-2
haplotype2-0000357	CAT	exon	42938601	42939130	.	-	.	ID=Cattle_Y_E01979;Parent=Cattle_Y_T01087;Dbxref=GeneID:132344495,GenBank:XM_059884115.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344495;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01087;gene_id=Cattle_Y_G00702;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884115.1-1
haplotype2-0000357	CAT	CDS	42935901	42935924	.	-	0	ID=Cattle_Y_C01611;Parent=Cattle_Y_T01087;Dbxref=GeneID:132344495,GenBank:XP_059740098.1;Name=XP_059740098.1;gbkey=CDS;gene=LOC132344495;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740098.1;gene_id=Cattle_Y_G00702;transcript_id=Cattle_Y_T01087;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42937183	42937269	.	-	0	ID=Cattle_Y_C01612;Parent=Cattle_Y_T01087;Dbxref=GeneID:132344495,GenBank:XP_059740098.1;Name=XP_059740098.1;gbkey=CDS;gene=LOC132344495;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740098.1;gene_id=Cattle_Y_G00702;transcript_id=Cattle_Y_T01087;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42937389	42937534	.	-	2	ID=Cattle_Y_C01613;Parent=Cattle_Y_T01087;Dbxref=GeneID:132344495,GenBank:XP_059740098.1;Name=XP_059740098.1;gbkey=CDS;gene=LOC132344495;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740098.1;gene_id=Cattle_Y_G00702;transcript_id=Cattle_Y_T01087;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42937676	42937787	.	-	0	ID=Cattle_Y_C01614;Parent=Cattle_Y_T01087;Dbxref=GeneID:132344495,GenBank:XP_059740098.1;Name=XP_059740098.1;gbkey=CDS;gene=LOC132344495;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740098.1;gene_id=Cattle_Y_G00702;transcript_id=Cattle_Y_T01087;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42937930	42938007	.	-	0	ID=Cattle_Y_C01615;Parent=Cattle_Y_T01087;Dbxref=GeneID:132344495,GenBank:XP_059740098.1;Name=XP_059740098.1;gbkey=CDS;gene=LOC132344495;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740098.1;gene_id=Cattle_Y_G00702;transcript_id=Cattle_Y_T01087;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42938601	42939128	.	-	0	ID=Cattle_Y_C01616;Parent=Cattle_Y_T01087;Dbxref=GeneID:132344495,GenBank:XP_059740098.1;Name=XP_059740098.1;gbkey=CDS;gene=LOC132344495;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740098.1;gene_id=Cattle_Y_G00702;transcript_id=Cattle_Y_T01087;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	42935705	42939130	.	-	.	ID=Cattle_Y_T01088;Parent=Cattle_Y_G00702;Dbxref=GeneID:132344495,GenBank:XM_059884116.1;Name=XM_059884116.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344495;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T01088;gene_id=Cattle_Y_G00702;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884116.1
haplotype2-0000357	CAT	exon	42935705	42935924	.	-	.	ID=Cattle_Y_E01980;Parent=Cattle_Y_T01088;Dbxref=GeneID:132344495,GenBank:XM_059884116.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344495;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01088;gene_id=Cattle_Y_G00702;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884116.1-5
haplotype2-0000357	CAT	exon	42937183	42937269	.	-	.	ID=Cattle_Y_E01981;Parent=Cattle_Y_T01088;Dbxref=GeneID:132344495,GenBank:XM_059884116.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344495;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01088;gene_id=Cattle_Y_G00702;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884116.1-4
haplotype2-0000357	CAT	exon	42937389	42937534	.	-	.	ID=Cattle_Y_E01982;Parent=Cattle_Y_T01088;Dbxref=GeneID:132344495,GenBank:XM_059884116.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344495;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01088;gene_id=Cattle_Y_G00702;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884116.1-3
haplotype2-0000357	CAT	exon	42937676	42937787	.	-	.	ID=Cattle_Y_E01983;Parent=Cattle_Y_T01088;Dbxref=GeneID:132344495,GenBank:XM_059884116.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344495;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01088;gene_id=Cattle_Y_G00702;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884116.1-2
haplotype2-0000357	CAT	exon	42938580	42939130	.	-	.	ID=Cattle_Y_E01984;Parent=Cattle_Y_T01088;Dbxref=GeneID:132344495,GenBank:XM_059884116.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344495;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01088;gene_id=Cattle_Y_G00702;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884116.1-1
haplotype2-0000357	CAT	CDS	42935901	42935924	.	-	0	ID=Cattle_Y_C01617;Parent=Cattle_Y_T01088;Dbxref=GeneID:132344495,GenBank:XP_059740099.1;Name=XP_059740099.1;gbkey=CDS;gene=LOC132344495;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740099.1;gene_id=Cattle_Y_G00702;transcript_id=Cattle_Y_T01088;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42937183	42937269	.	-	0	ID=Cattle_Y_C01618;Parent=Cattle_Y_T01088;Dbxref=GeneID:132344495,GenBank:XP_059740099.1;Name=XP_059740099.1;gbkey=CDS;gene=LOC132344495;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740099.1;gene_id=Cattle_Y_G00702;transcript_id=Cattle_Y_T01088;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42937389	42937534	.	-	2	ID=Cattle_Y_C01619;Parent=Cattle_Y_T01088;Dbxref=GeneID:132344495,GenBank:XP_059740099.1;Name=XP_059740099.1;gbkey=CDS;gene=LOC132344495;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740099.1;gene_id=Cattle_Y_G00702;transcript_id=Cattle_Y_T01088;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42937676	42937787	.	-	0	ID=Cattle_Y_C01620;Parent=Cattle_Y_T01088;Dbxref=GeneID:132344495,GenBank:XP_059740099.1;Name=XP_059740099.1;gbkey=CDS;gene=LOC132344495;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740099.1;gene_id=Cattle_Y_G00702;transcript_id=Cattle_Y_T01088;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42938580	42939128	.	-	0	ID=Cattle_Y_C01621;Parent=Cattle_Y_T01088;Dbxref=GeneID:132344495,GenBank:XP_059740099.1;Name=XP_059740099.1;gbkey=CDS;gene=LOC132344495;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740099.1;gene_id=Cattle_Y_G00702;transcript_id=Cattle_Y_T01088;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	42951404	42955044	.	-	.	ID=Cattle_Y_G00703;Dbxref=GeneID:132344497;Name=LOC132344497;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344497;gene_biotype=protein_coding;gene_id=Cattle_Y_G00703;source_id=gene-LOC132344497
haplotype2-0000357	CAT	mRNA	42951404	42955044	.	-	.	ID=Cattle_Y_T01089;Parent=Cattle_Y_G00703;Dbxref=GeneID:132344497,GenBank:XM_059884119.1;Name=XM_059884119.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344497;model_evidence=Supporting evidence includes similarity to: 3 ESTs%2C 5 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T01089;gene_id=Cattle_Y_G00703;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884119.1
haplotype2-0000357	CAT	exon	42951404	42951623	.	-	.	ID=Cattle_Y_E01985;Parent=Cattle_Y_T01089;Dbxref=GeneID:132344497,GenBank:XM_059884119.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344497;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01089;gene_id=Cattle_Y_G00703;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884119.1-6
haplotype2-0000357	CAT	exon	42952882	42952968	.	-	.	ID=Cattle_Y_E01986;Parent=Cattle_Y_T01089;Dbxref=GeneID:132344497,GenBank:XM_059884119.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344497;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01089;gene_id=Cattle_Y_G00703;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884119.1-5
haplotype2-0000357	CAT	exon	42953088	42953233	.	-	.	ID=Cattle_Y_E01987;Parent=Cattle_Y_T01089;Dbxref=GeneID:132344497,GenBank:XM_059884119.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344497;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01089;gene_id=Cattle_Y_G00703;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884119.1-4
haplotype2-0000357	CAT	exon	42953375	42953486	.	-	.	ID=Cattle_Y_E01988;Parent=Cattle_Y_T01089;Dbxref=GeneID:132344497,GenBank:XM_059884119.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344497;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01089;gene_id=Cattle_Y_G00703;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884119.1-3
haplotype2-0000357	CAT	exon	42953629	42953706	.	-	.	ID=Cattle_Y_E01989;Parent=Cattle_Y_T01089;Dbxref=GeneID:132344497,GenBank:XM_059884119.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344497;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01089;gene_id=Cattle_Y_G00703;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884119.1-2
haplotype2-0000357	CAT	exon	42954300	42955044	.	-	.	ID=Cattle_Y_E01990;Parent=Cattle_Y_T01089;Dbxref=GeneID:132344497,GenBank:XM_059884119.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344497;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01089;gene_id=Cattle_Y_G00703;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884119.1-1
haplotype2-0000357	CAT	CDS	42951600	42951623	.	-	0	ID=Cattle_Y_C01622;Parent=Cattle_Y_T01089;Dbxref=GeneID:132344497,GenBank:XP_059740102.1;Name=XP_059740102.1;gbkey=CDS;gene=LOC132344497;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740102.1;gene_id=Cattle_Y_G00703;transcript_id=Cattle_Y_T01089;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42952882	42952968	.	-	0	ID=Cattle_Y_C01623;Parent=Cattle_Y_T01089;Dbxref=GeneID:132344497,GenBank:XP_059740102.1;Name=XP_059740102.1;gbkey=CDS;gene=LOC132344497;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740102.1;gene_id=Cattle_Y_G00703;transcript_id=Cattle_Y_T01089;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42953088	42953233	.	-	2	ID=Cattle_Y_C01624;Parent=Cattle_Y_T01089;Dbxref=GeneID:132344497,GenBank:XP_059740102.1;Name=XP_059740102.1;gbkey=CDS;gene=LOC132344497;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740102.1;gene_id=Cattle_Y_G00703;transcript_id=Cattle_Y_T01089;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42953375	42953486	.	-	0	ID=Cattle_Y_C01625;Parent=Cattle_Y_T01089;Dbxref=GeneID:132344497,GenBank:XP_059740102.1;Name=XP_059740102.1;gbkey=CDS;gene=LOC132344497;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740102.1;gene_id=Cattle_Y_G00703;transcript_id=Cattle_Y_T01089;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42953629	42953706	.	-	0	ID=Cattle_Y_C01626;Parent=Cattle_Y_T01089;Dbxref=GeneID:132344497,GenBank:XP_059740102.1;Name=XP_059740102.1;gbkey=CDS;gene=LOC132344497;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740102.1;gene_id=Cattle_Y_G00703;transcript_id=Cattle_Y_T01089;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42954300	42954827	.	-	0	ID=Cattle_Y_C01627;Parent=Cattle_Y_T01089;Dbxref=GeneID:132344497,GenBank:XP_059740102.1;Name=XP_059740102.1;gbkey=CDS;gene=LOC132344497;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740102.1;gene_id=Cattle_Y_G00703;transcript_id=Cattle_Y_T01089;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	42951404	42955044	.	-	.	ID=Cattle_Y_T01090;Parent=Cattle_Y_G00703;Dbxref=GeneID:132344497,GenBank:XM_059884120.1;Name=XM_059884120.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344497;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T01090;gene_id=Cattle_Y_G00703;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884120.1
haplotype2-0000357	CAT	exon	42951404	42951623	.	-	.	ID=Cattle_Y_E01991;Parent=Cattle_Y_T01090;Dbxref=GeneID:132344497,GenBank:XM_059884120.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344497;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01090;gene_id=Cattle_Y_G00703;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884120.1-5
haplotype2-0000357	CAT	exon	42952882	42952968	.	-	.	ID=Cattle_Y_E01992;Parent=Cattle_Y_T01090;Dbxref=GeneID:132344497,GenBank:XM_059884120.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344497;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01090;gene_id=Cattle_Y_G00703;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884120.1-4
haplotype2-0000357	CAT	exon	42953088	42953233	.	-	.	ID=Cattle_Y_E01993;Parent=Cattle_Y_T01090;Dbxref=GeneID:132344497,GenBank:XM_059884120.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344497;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01090;gene_id=Cattle_Y_G00703;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884120.1-3
haplotype2-0000357	CAT	exon	42953375	42953486	.	-	.	ID=Cattle_Y_E01994;Parent=Cattle_Y_T01090;Dbxref=GeneID:132344497,GenBank:XM_059884120.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344497;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01090;gene_id=Cattle_Y_G00703;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884120.1-2
haplotype2-0000357	CAT	exon	42954279	42955044	.	-	.	ID=Cattle_Y_E01995;Parent=Cattle_Y_T01090;Dbxref=GeneID:132344497,GenBank:XM_059884120.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344497;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01090;gene_id=Cattle_Y_G00703;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884120.1-1
haplotype2-0000357	CAT	CDS	42951600	42951623	.	-	0	ID=Cattle_Y_C01628;Parent=Cattle_Y_T01090;Dbxref=GeneID:132344497,GenBank:XP_059740103.1;Name=XP_059740103.1;gbkey=CDS;gene=LOC132344497;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740103.1;gene_id=Cattle_Y_G00703;transcript_id=Cattle_Y_T01090;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42952882	42952968	.	-	0	ID=Cattle_Y_C01629;Parent=Cattle_Y_T01090;Dbxref=GeneID:132344497,GenBank:XP_059740103.1;Name=XP_059740103.1;gbkey=CDS;gene=LOC132344497;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740103.1;gene_id=Cattle_Y_G00703;transcript_id=Cattle_Y_T01090;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42953088	42953233	.	-	2	ID=Cattle_Y_C01630;Parent=Cattle_Y_T01090;Dbxref=GeneID:132344497,GenBank:XP_059740103.1;Name=XP_059740103.1;gbkey=CDS;gene=LOC132344497;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740103.1;gene_id=Cattle_Y_G00703;transcript_id=Cattle_Y_T01090;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42953375	42953486	.	-	0	ID=Cattle_Y_C01631;Parent=Cattle_Y_T01090;Dbxref=GeneID:132344497,GenBank:XP_059740103.1;Name=XP_059740103.1;gbkey=CDS;gene=LOC132344497;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740103.1;gene_id=Cattle_Y_G00703;transcript_id=Cattle_Y_T01090;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	42954279	42954827	.	-	0	ID=Cattle_Y_C01632;Parent=Cattle_Y_T01090;Dbxref=GeneID:132344497,GenBank:XP_059740103.1;Name=XP_059740103.1;gbkey=CDS;gene=LOC132344497;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740103.1;gene_id=Cattle_Y_G00703;transcript_id=Cattle_Y_T01090;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	43322998	43329225	.	-	.	ID=Cattle_Y_G00704;Dbxref=GeneID:132344438;Name=LOC132344438;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344438;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00704;source_id=gene-LOC132344438
haplotype2-0000357	CAT	exon	43322998	43323740	.	-	.	ID=Cattle_Y_T01091;Parent=Cattle_Y_G00704;Dbxref=GeneID:132344438;gbkey=exon;gene=LOC132344438;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00704;transcript_id=Cattle_Y_T01091;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344438
haplotype2-0000357	CAT	exon	43323785	43324150	.	-	.	ID=Cattle_Y_T01092;Parent=Cattle_Y_G00704;Dbxref=GeneID:132344438;gbkey=exon;gene=LOC132344438;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00704;transcript_id=Cattle_Y_T01092;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344438-2
haplotype2-0000357	CAT	exon	43329170	43329225	.	-	.	ID=Cattle_Y_T01093;Parent=Cattle_Y_G00704;Dbxref=GeneID:132344438;gbkey=exon;gene=LOC132344438;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00704;transcript_id=Cattle_Y_T01093;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344438-3
haplotype2-0000357	CAT	gene	43336172	43341561	.	-	.	ID=Cattle_Y_G00705;Dbxref=GeneID:132344498;Name=LOC132344498;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC132344498;gene_biotype=protein_coding;gene_id=Cattle_Y_G00705;source_id=gene-LOC132344498
haplotype2-0000357	CAT	mRNA	43336172	43341561	.	-	.	ID=Cattle_Y_T01094;Parent=Cattle_Y_G00705;Dbxref=GeneID:132344498,GenBank:XM_059884121.1;Name=XM_059884121.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344498;model_evidence=Supporting evidence includes similarity to: 5 Proteins%2C and 97%25 coverage of the annotated genomic feature by RNAseq alignments;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01094;gene_id=Cattle_Y_G00705;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884121.1
haplotype2-0000357	CAT	exon	43336172	43336997	.	-	.	ID=Cattle_Y_E01996;Parent=Cattle_Y_T01094;Dbxref=GeneID:132344498,GenBank:XM_059884121.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344498;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01094;gene_id=Cattle_Y_G00705;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884121.1-5
haplotype2-0000357	CAT	exon	43337756	43338358	.	-	.	ID=Cattle_Y_E01997;Parent=Cattle_Y_T01094;Dbxref=GeneID:132344498,GenBank:XM_059884121.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344498;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01094;gene_id=Cattle_Y_G00705;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884121.1-5
haplotype2-0000357	CAT	exon	43338643	43338962	.	-	.	ID=Cattle_Y_E01998;Parent=Cattle_Y_T01094;Dbxref=GeneID:132344498,GenBank:XM_059884121.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344498;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01094;gene_id=Cattle_Y_G00705;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884121.1-5
haplotype2-0000357	CAT	exon	43340334	43340400	.	-	.	ID=Cattle_Y_E01999;Parent=Cattle_Y_T01094;Dbxref=GeneID:132344498,GenBank:XM_059884121.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344498;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01094;gene_id=Cattle_Y_G00705;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884121.1-2
haplotype2-0000357	CAT	exon	43341217	43341561	.	-	.	ID=Cattle_Y_E02000;Parent=Cattle_Y_T01094;Dbxref=GeneID:132344498,GenBank:XM_059884121.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344498;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01094;gene_id=Cattle_Y_G00705;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884121.1-1
haplotype2-0000357	CAT	CDS	43336421	43336997	.	-	1	ID=Cattle_Y_C01633;Parent=Cattle_Y_T01094;gene_id=Cattle_Y_G00705;transcript_id=Cattle_Y_T01094;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43337756	43338358	.	-	1	ID=Cattle_Y_C01634;Parent=Cattle_Y_T01094;gene_id=Cattle_Y_G00705;transcript_id=Cattle_Y_T01094;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43338643	43338962	.	-	0	ID=Cattle_Y_C01635;Parent=Cattle_Y_T01094;gene_id=Cattle_Y_G00705;transcript_id=Cattle_Y_T01094;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43340334	43340369	.	-	0	ID=Cattle_Y_C01636;Parent=Cattle_Y_T01094;gene_id=Cattle_Y_G00705;transcript_id=Cattle_Y_T01094;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	43389688	43391130	.	+	.	ID=Cattle_Y_G00706;Dbxref=GeneID:132344634;Name=LOC132344634;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344634;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00706;source_id=gene-LOC132344634
haplotype2-0000357	CAT	exon	43389688	43391130	.	+	.	ID=Cattle_Y_T01095;Parent=Cattle_Y_G00706;Dbxref=GeneID:132344634;gbkey=exon;gene=LOC132344634;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 71%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00706;transcript_id=Cattle_Y_T01095;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344634
haplotype2-0000357	CAT	gene	43400639	43404193	.	-	.	ID=Cattle_Y_G00707;Dbxref=GeneID:132344625;Name=LOC132344625;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344625;gene_biotype=protein_coding;gene_id=Cattle_Y_G00707;source_id=gene-LOC132344625
haplotype2-0000357	CAT	mRNA	43400639	43404193	.	-	.	ID=Cattle_Y_T01096;Parent=Cattle_Y_G00707;Dbxref=GeneID:132344625,GenBank:XM_059884283.1;Name=XM_059884283.1;gbkey=mRNA;gene=LOC132344625;model_evidence=Supporting evidence includes similarity to: 6 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01096;gene_id=Cattle_Y_G00707;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884283.1
haplotype2-0000357	CAT	exon	43400639	43400716	.	-	.	ID=Cattle_Y_E02001;Parent=Cattle_Y_T01096;Dbxref=GeneID:132344625,GenBank:XM_059884283.1;gbkey=mRNA;gene=LOC132344625;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01096;gene_id=Cattle_Y_G00707;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884283.1-6
haplotype2-0000357	CAT	exon	43400833	43400978	.	-	.	ID=Cattle_Y_E02002;Parent=Cattle_Y_T01096;Dbxref=GeneID:132344625,GenBank:XM_059884283.1;gbkey=mRNA;gene=LOC132344625;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01096;gene_id=Cattle_Y_G00707;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884283.1-5
haplotype2-0000357	CAT	exon	43401073	43401178	.	-	.	ID=Cattle_Y_E02003;Parent=Cattle_Y_T01096;Dbxref=GeneID:132344625,GenBank:XM_059884283.1;gbkey=mRNA;gene=LOC132344625;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01096;gene_id=Cattle_Y_G00707;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884283.1-4
haplotype2-0000357	CAT	exon	43401367	43401444	.	-	.	ID=Cattle_Y_E02004;Parent=Cattle_Y_T01096;Dbxref=GeneID:132344625,GenBank:XM_059884283.1;gbkey=mRNA;gene=LOC132344625;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01096;gene_id=Cattle_Y_G00707;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884283.1-3
haplotype2-0000357	CAT	exon	43403519	43403955	.	-	.	ID=Cattle_Y_E02005;Parent=Cattle_Y_T01096;Dbxref=GeneID:132344625,GenBank:XM_059884283.1;gbkey=mRNA;gene=LOC132344625;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01096;gene_id=Cattle_Y_G00707;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884283.1-2
haplotype2-0000357	CAT	exon	43404007	43404193	.	-	.	ID=Cattle_Y_E02006;Parent=Cattle_Y_T01096;Dbxref=GeneID:132344625,GenBank:XM_059884283.1;gbkey=mRNA;gene=LOC132344625;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01096;gene_id=Cattle_Y_G00707;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884283.1-1
haplotype2-0000357	CAT	CDS	43400639	43400716	.	-	0	ID=Cattle_Y_C01637;Parent=Cattle_Y_T01096;Dbxref=GeneID:132344625,GenBank:XP_059740266.1;Name=XP_059740266.1;gbkey=CDS;gene=LOC132344625;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740266.1;gene_id=Cattle_Y_G00707;transcript_id=Cattle_Y_T01096;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43400833	43400978	.	-	2	ID=Cattle_Y_C01638;Parent=Cattle_Y_T01096;Dbxref=GeneID:132344625,GenBank:XP_059740266.1;Name=XP_059740266.1;gbkey=CDS;gene=LOC132344625;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740266.1;gene_id=Cattle_Y_G00707;transcript_id=Cattle_Y_T01096;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43401073	43401178	.	-	0	ID=Cattle_Y_C01639;Parent=Cattle_Y_T01096;Dbxref=GeneID:132344625,GenBank:XP_059740266.1;Name=XP_059740266.1;gbkey=CDS;gene=LOC132344625;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740266.1;gene_id=Cattle_Y_G00707;transcript_id=Cattle_Y_T01096;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43401367	43401444	.	-	0	ID=Cattle_Y_C01640;Parent=Cattle_Y_T01096;Dbxref=GeneID:132344625,GenBank:XP_059740266.1;Name=XP_059740266.1;gbkey=CDS;gene=LOC132344625;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740266.1;gene_id=Cattle_Y_G00707;transcript_id=Cattle_Y_T01096;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43403519	43403955	.	-	2	ID=Cattle_Y_C01641;Parent=Cattle_Y_T01096;Dbxref=GeneID:132344625,GenBank:XP_059740266.1;Name=XP_059740266.1;gbkey=CDS;gene=LOC132344625;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740266.1;gene_id=Cattle_Y_G00707;transcript_id=Cattle_Y_T01096;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43404007	43404130	.	-	0	ID=Cattle_Y_C01642;Parent=Cattle_Y_T01096;Dbxref=GeneID:132344625,GenBank:XP_059740266.1;Name=XP_059740266.1;gbkey=CDS;gene=LOC132344625;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740266.1;gene_id=Cattle_Y_G00707;transcript_id=Cattle_Y_T01096;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	43421169	43424861	.	-	.	ID=Cattle_Y_G00708;Dbxref=GeneID:132344476;Name=LOC132344476;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344476;gene_biotype=protein_coding;gene_id=Cattle_Y_G00708;source_id=gene-LOC132344476
haplotype2-0000357	CAT	mRNA	43421169	43424860	.	-	.	ID=Cattle_Y_T01097;Parent=Cattle_Y_G00708;Dbxref=GeneID:132344476,GenBank:XM_059884079.1;Name=XM_059884079.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344476;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 4 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T01097;gene_id=Cattle_Y_G00708;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884079.1
haplotype2-0000357	CAT	exon	43421169	43421388	.	-	.	ID=Cattle_Y_E02007;Parent=Cattle_Y_T01097;Dbxref=GeneID:132344476,GenBank:XM_059884079.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344476;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01097;gene_id=Cattle_Y_G00708;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884079.1-6
haplotype2-0000357	CAT	exon	43422647	43422733	.	-	.	ID=Cattle_Y_E02008;Parent=Cattle_Y_T01097;Dbxref=GeneID:132344476,GenBank:XM_059884079.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344476;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01097;gene_id=Cattle_Y_G00708;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884079.1-5
haplotype2-0000357	CAT	exon	43422853	43422998	.	-	.	ID=Cattle_Y_E02009;Parent=Cattle_Y_T01097;Dbxref=GeneID:132344476,GenBank:XM_059884079.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344476;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01097;gene_id=Cattle_Y_G00708;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884079.1-4
haplotype2-0000357	CAT	exon	43423140	43423251	.	-	.	ID=Cattle_Y_E02010;Parent=Cattle_Y_T01097;Dbxref=GeneID:132344476,GenBank:XM_059884079.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344476;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01097;gene_id=Cattle_Y_G00708;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884079.1-3
haplotype2-0000357	CAT	exon	43423394	43423471	.	-	.	ID=Cattle_Y_E02011;Parent=Cattle_Y_T01097;Dbxref=GeneID:132344476,GenBank:XM_059884079.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344476;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01097;gene_id=Cattle_Y_G00708;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884079.1-2
haplotype2-0000357	CAT	exon	43424108	43424860	.	-	.	ID=Cattle_Y_E02012;Parent=Cattle_Y_T01097;Dbxref=GeneID:132344476,GenBank:XM_059884079.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344476;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01097;gene_id=Cattle_Y_G00708;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884079.1-1
haplotype2-0000357	CAT	CDS	43421365	43421388	.	-	0	ID=Cattle_Y_C01643;Parent=Cattle_Y_T01097;Dbxref=GeneID:132344476,GenBank:XP_059740062.1;Name=XP_059740062.1;gbkey=CDS;gene=LOC132344476;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740062.1;gene_id=Cattle_Y_G00708;transcript_id=Cattle_Y_T01097;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43422647	43422733	.	-	0	ID=Cattle_Y_C01644;Parent=Cattle_Y_T01097;Dbxref=GeneID:132344476,GenBank:XP_059740062.1;Name=XP_059740062.1;gbkey=CDS;gene=LOC132344476;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740062.1;gene_id=Cattle_Y_G00708;transcript_id=Cattle_Y_T01097;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43422853	43422998	.	-	2	ID=Cattle_Y_C01645;Parent=Cattle_Y_T01097;Dbxref=GeneID:132344476,GenBank:XP_059740062.1;Name=XP_059740062.1;gbkey=CDS;gene=LOC132344476;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740062.1;gene_id=Cattle_Y_G00708;transcript_id=Cattle_Y_T01097;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43423140	43423251	.	-	0	ID=Cattle_Y_C01646;Parent=Cattle_Y_T01097;Dbxref=GeneID:132344476,GenBank:XP_059740062.1;Name=XP_059740062.1;gbkey=CDS;gene=LOC132344476;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740062.1;gene_id=Cattle_Y_G00708;transcript_id=Cattle_Y_T01097;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43423394	43423471	.	-	0	ID=Cattle_Y_C01647;Parent=Cattle_Y_T01097;Dbxref=GeneID:132344476,GenBank:XP_059740062.1;Name=XP_059740062.1;gbkey=CDS;gene=LOC132344476;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740062.1;gene_id=Cattle_Y_G00708;transcript_id=Cattle_Y_T01097;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43424108	43424635	.	-	0	ID=Cattle_Y_C01648;Parent=Cattle_Y_T01097;Dbxref=GeneID:132344476,GenBank:XP_059740062.1;Name=XP_059740062.1;gbkey=CDS;gene=LOC132344476;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740062.1;gene_id=Cattle_Y_G00708;transcript_id=Cattle_Y_T01097;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	43421169	43424861	.	-	.	ID=Cattle_Y_T01098;Parent=Cattle_Y_G00708;Dbxref=GeneID:132344476,GenBank:XM_059884080.1;Name=XM_059884080.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344476;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T01098;gene_id=Cattle_Y_G00708;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884080.1
haplotype2-0000357	CAT	exon	43421169	43421388	.	-	.	ID=Cattle_Y_E02013;Parent=Cattle_Y_T01098;Dbxref=GeneID:132344476,GenBank:XM_059884080.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344476;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01098;gene_id=Cattle_Y_G00708;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884080.1-5
haplotype2-0000357	CAT	exon	43422647	43422733	.	-	.	ID=Cattle_Y_E02014;Parent=Cattle_Y_T01098;Dbxref=GeneID:132344476,GenBank:XM_059884080.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344476;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01098;gene_id=Cattle_Y_G00708;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884080.1-4
haplotype2-0000357	CAT	exon	43422853	43422998	.	-	.	ID=Cattle_Y_E02015;Parent=Cattle_Y_T01098;Dbxref=GeneID:132344476,GenBank:XM_059884080.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344476;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01098;gene_id=Cattle_Y_G00708;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884080.1-3
haplotype2-0000357	CAT	exon	43423140	43423251	.	-	.	ID=Cattle_Y_E02016;Parent=Cattle_Y_T01098;Dbxref=GeneID:132344476,GenBank:XM_059884080.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344476;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01098;gene_id=Cattle_Y_G00708;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884080.1-2
haplotype2-0000357	CAT	exon	43424087	43424861	.	-	.	ID=Cattle_Y_E02017;Parent=Cattle_Y_T01098;Dbxref=GeneID:132344476,GenBank:XM_059884080.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344476;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01098;gene_id=Cattle_Y_G00708;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884080.1-1
haplotype2-0000357	CAT	CDS	43421365	43421388	.	-	0	ID=Cattle_Y_C01649;Parent=Cattle_Y_T01098;Dbxref=GeneID:132344476,GenBank:XP_059740063.1;Name=XP_059740063.1;gbkey=CDS;gene=LOC132344476;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740063.1;gene_id=Cattle_Y_G00708;transcript_id=Cattle_Y_T01098;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43422647	43422733	.	-	0	ID=Cattle_Y_C01650;Parent=Cattle_Y_T01098;Dbxref=GeneID:132344476,GenBank:XP_059740063.1;Name=XP_059740063.1;gbkey=CDS;gene=LOC132344476;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740063.1;gene_id=Cattle_Y_G00708;transcript_id=Cattle_Y_T01098;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43422853	43422998	.	-	2	ID=Cattle_Y_C01651;Parent=Cattle_Y_T01098;Dbxref=GeneID:132344476,GenBank:XP_059740063.1;Name=XP_059740063.1;gbkey=CDS;gene=LOC132344476;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740063.1;gene_id=Cattle_Y_G00708;transcript_id=Cattle_Y_T01098;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43423140	43423251	.	-	0	ID=Cattle_Y_C01652;Parent=Cattle_Y_T01098;Dbxref=GeneID:132344476,GenBank:XP_059740063.1;Name=XP_059740063.1;gbkey=CDS;gene=LOC132344476;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740063.1;gene_id=Cattle_Y_G00708;transcript_id=Cattle_Y_T01098;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43424087	43424635	.	-	0	ID=Cattle_Y_C01653;Parent=Cattle_Y_T01098;Dbxref=GeneID:132344476,GenBank:XP_059740063.1;Name=XP_059740063.1;gbkey=CDS;gene=LOC132344476;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740063.1;gene_id=Cattle_Y_G00708;transcript_id=Cattle_Y_T01098;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	43436895	43440329	.	-	.	ID=Cattle_Y_G00709;Dbxref=GeneID:132344489;Name=LOC132344489;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344489;gene_biotype=protein_coding;gene_id=Cattle_Y_G00709;source_id=gene-LOC132344489
haplotype2-0000357	CAT	mRNA	43436895	43440329	.	-	.	ID=Cattle_Y_T01099;Parent=Cattle_Y_G00709;Dbxref=GeneID:132344489,GenBank:XM_059884103.1;Name=XM_059884103.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344489;model_evidence=Supporting evidence includes similarity to: 2 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T01099;gene_id=Cattle_Y_G00709;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884103.1
haplotype2-0000357	CAT	exon	43436895	43437114	.	-	.	ID=Cattle_Y_E02018;Parent=Cattle_Y_T01099;Dbxref=GeneID:132344489,GenBank:XM_059884103.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344489;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01099;gene_id=Cattle_Y_G00709;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884103.1-6
haplotype2-0000357	CAT	exon	43438373	43438459	.	-	.	ID=Cattle_Y_E02019;Parent=Cattle_Y_T01099;Dbxref=GeneID:132344489,GenBank:XM_059884103.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344489;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01099;gene_id=Cattle_Y_G00709;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884103.1-5
haplotype2-0000357	CAT	exon	43438579	43438724	.	-	.	ID=Cattle_Y_E02020;Parent=Cattle_Y_T01099;Dbxref=GeneID:132344489,GenBank:XM_059884103.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344489;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01099;gene_id=Cattle_Y_G00709;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884103.1-4
haplotype2-0000357	CAT	exon	43438866	43438977	.	-	.	ID=Cattle_Y_E02021;Parent=Cattle_Y_T01099;Dbxref=GeneID:132344489,GenBank:XM_059884103.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344489;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01099;gene_id=Cattle_Y_G00709;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884103.1-3
haplotype2-0000357	CAT	exon	43439120	43439197	.	-	.	ID=Cattle_Y_E02022;Parent=Cattle_Y_T01099;Dbxref=GeneID:132344489,GenBank:XM_059884103.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344489;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01099;gene_id=Cattle_Y_G00709;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884103.1-2
haplotype2-0000357	CAT	exon	43439791	43440329	.	-	.	ID=Cattle_Y_E02023;Parent=Cattle_Y_T01099;Dbxref=GeneID:132344489,GenBank:XM_059884103.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344489;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01099;gene_id=Cattle_Y_G00709;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884103.1-1
haplotype2-0000357	CAT	CDS	43437091	43437114	.	-	0	ID=Cattle_Y_C01654;Parent=Cattle_Y_T01099;Dbxref=GeneID:132344489,GenBank:XP_059740086.1;Name=XP_059740086.1;gbkey=CDS;gene=LOC132344489;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740086.1;gene_id=Cattle_Y_G00709;transcript_id=Cattle_Y_T01099;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43438373	43438459	.	-	0	ID=Cattle_Y_C01655;Parent=Cattle_Y_T01099;Dbxref=GeneID:132344489,GenBank:XP_059740086.1;Name=XP_059740086.1;gbkey=CDS;gene=LOC132344489;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740086.1;gene_id=Cattle_Y_G00709;transcript_id=Cattle_Y_T01099;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43438579	43438724	.	-	2	ID=Cattle_Y_C01656;Parent=Cattle_Y_T01099;Dbxref=GeneID:132344489,GenBank:XP_059740086.1;Name=XP_059740086.1;gbkey=CDS;gene=LOC132344489;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740086.1;gene_id=Cattle_Y_G00709;transcript_id=Cattle_Y_T01099;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43438866	43438977	.	-	0	ID=Cattle_Y_C01657;Parent=Cattle_Y_T01099;Dbxref=GeneID:132344489,GenBank:XP_059740086.1;Name=XP_059740086.1;gbkey=CDS;gene=LOC132344489;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740086.1;gene_id=Cattle_Y_G00709;transcript_id=Cattle_Y_T01099;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43439120	43439197	.	-	0	ID=Cattle_Y_C01658;Parent=Cattle_Y_T01099;Dbxref=GeneID:132344489,GenBank:XP_059740086.1;Name=XP_059740086.1;gbkey=CDS;gene=LOC132344489;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740086.1;gene_id=Cattle_Y_G00709;transcript_id=Cattle_Y_T01099;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43439791	43440318	.	-	0	ID=Cattle_Y_C01659;Parent=Cattle_Y_T01099;Dbxref=GeneID:132344489,GenBank:XP_059740086.1;Name=XP_059740086.1;gbkey=CDS;gene=LOC132344489;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740086.1;gene_id=Cattle_Y_G00709;transcript_id=Cattle_Y_T01099;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	43436895	43440329	.	-	.	ID=Cattle_Y_T01100;Parent=Cattle_Y_G00709;Dbxref=GeneID:132344489,GenBank:XM_059884104.1;Name=XM_059884104.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344489;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T01100;gene_id=Cattle_Y_G00709;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884104.1
haplotype2-0000357	CAT	exon	43436895	43437114	.	-	.	ID=Cattle_Y_E02024;Parent=Cattle_Y_T01100;Dbxref=GeneID:132344489,GenBank:XM_059884104.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344489;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01100;gene_id=Cattle_Y_G00709;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884104.1-5
haplotype2-0000357	CAT	exon	43438373	43438459	.	-	.	ID=Cattle_Y_E02025;Parent=Cattle_Y_T01100;Dbxref=GeneID:132344489,GenBank:XM_059884104.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344489;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01100;gene_id=Cattle_Y_G00709;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884104.1-4
haplotype2-0000357	CAT	exon	43438579	43438724	.	-	.	ID=Cattle_Y_E02026;Parent=Cattle_Y_T01100;Dbxref=GeneID:132344489,GenBank:XM_059884104.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344489;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01100;gene_id=Cattle_Y_G00709;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884104.1-3
haplotype2-0000357	CAT	exon	43438866	43438977	.	-	.	ID=Cattle_Y_E02027;Parent=Cattle_Y_T01100;Dbxref=GeneID:132344489,GenBank:XM_059884104.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344489;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01100;gene_id=Cattle_Y_G00709;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884104.1-2
haplotype2-0000357	CAT	exon	43439770	43440329	.	-	.	ID=Cattle_Y_E02028;Parent=Cattle_Y_T01100;Dbxref=GeneID:132344489,GenBank:XM_059884104.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344489;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01100;gene_id=Cattle_Y_G00709;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884104.1-1
haplotype2-0000357	CAT	CDS	43437091	43437114	.	-	0	ID=Cattle_Y_C01660;Parent=Cattle_Y_T01100;Dbxref=GeneID:132344489,GenBank:XP_059740087.1;Name=XP_059740087.1;gbkey=CDS;gene=LOC132344489;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740087.1;gene_id=Cattle_Y_G00709;transcript_id=Cattle_Y_T01100;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43438373	43438459	.	-	0	ID=Cattle_Y_C01661;Parent=Cattle_Y_T01100;Dbxref=GeneID:132344489,GenBank:XP_059740087.1;Name=XP_059740087.1;gbkey=CDS;gene=LOC132344489;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740087.1;gene_id=Cattle_Y_G00709;transcript_id=Cattle_Y_T01100;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43438579	43438724	.	-	2	ID=Cattle_Y_C01662;Parent=Cattle_Y_T01100;Dbxref=GeneID:132344489,GenBank:XP_059740087.1;Name=XP_059740087.1;gbkey=CDS;gene=LOC132344489;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740087.1;gene_id=Cattle_Y_G00709;transcript_id=Cattle_Y_T01100;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43438866	43438977	.	-	0	ID=Cattle_Y_C01663;Parent=Cattle_Y_T01100;Dbxref=GeneID:132344489,GenBank:XP_059740087.1;Name=XP_059740087.1;gbkey=CDS;gene=LOC132344489;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740087.1;gene_id=Cattle_Y_G00709;transcript_id=Cattle_Y_T01100;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43439770	43440318	.	-	0	ID=Cattle_Y_C01664;Parent=Cattle_Y_T01100;Dbxref=GeneID:132344489,GenBank:XP_059740087.1;Name=XP_059740087.1;gbkey=CDS;gene=LOC132344489;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740087.1;gene_id=Cattle_Y_G00709;transcript_id=Cattle_Y_T01100;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	43452905	43456226	.	-	.	ID=Cattle_Y_G00710;Dbxref=GeneID:132344437;Name=LOC132344437;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344437;gene_biotype=protein_coding;gene_id=Cattle_Y_G00710;source_id=gene-LOC132344437
haplotype2-0000357	CAT	mRNA	43452905	43456226	.	-	.	ID=Cattle_Y_T01101;Parent=Cattle_Y_G00710;Dbxref=GeneID:132344437,GenBank:XM_059884008.1;Name=XM_059884008.1;gbkey=mRNA;gene=LOC132344437;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 94%25 coverage of the annotated genomic feature by RNAseq alignments;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01101;gene_id=Cattle_Y_G00710;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884008.1
haplotype2-0000357	CAT	exon	43452905	43452913	.	-	.	ID=Cattle_Y_E02029;Parent=Cattle_Y_T01101;Dbxref=GeneID:132344437,GenBank:XM_059884008.1;gbkey=mRNA;gene=LOC132344437;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01101;gene_id=Cattle_Y_G00710;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884008.1-5
haplotype2-0000357	CAT	exon	43453982	43454143	.	-	.	ID=Cattle_Y_E02030;Parent=Cattle_Y_T01101;Dbxref=GeneID:132344437,GenBank:XM_059884008.1;gbkey=mRNA;gene=LOC132344437;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01101;gene_id=Cattle_Y_G00710;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884008.1-5
haplotype2-0000357	CAT	exon	43454263	43454408	.	-	.	ID=Cattle_Y_E02031;Parent=Cattle_Y_T01101;Dbxref=GeneID:132344437,GenBank:XM_059884008.1;gbkey=mRNA;gene=LOC132344437;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01101;gene_id=Cattle_Y_G00710;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884008.1-5
haplotype2-0000357	CAT	exon	43454550	43454661	.	-	.	ID=Cattle_Y_E02032;Parent=Cattle_Y_T01101;Dbxref=GeneID:132344437,GenBank:XM_059884008.1;gbkey=mRNA;gene=LOC132344437;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01101;gene_id=Cattle_Y_G00710;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884008.1-5
haplotype2-0000357	CAT	exon	43455454	43456226	.	-	.	ID=Cattle_Y_E02033;Parent=Cattle_Y_T01101;Dbxref=GeneID:132344437,GenBank:XM_059884008.1;gbkey=mRNA;gene=LOC132344437;product=testis-specific Y-encoded protein 3-like;transcript_id=Cattle_Y_T01101;gene_id=Cattle_Y_G00710;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884008.1-1
haplotype2-0000357	CAT	CDS	43452905	43452913	.	-	0	ID=Cattle_Y_C01665;Parent=Cattle_Y_T01101;gene_id=Cattle_Y_G00710;transcript_id=Cattle_Y_T01101;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43453982	43454143	.	-	0	ID=Cattle_Y_C01666;Parent=Cattle_Y_T01101;gene_id=Cattle_Y_G00710;transcript_id=Cattle_Y_T01101;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43454263	43454408	.	-	2	ID=Cattle_Y_C01667;Parent=Cattle_Y_T01101;gene_id=Cattle_Y_G00710;transcript_id=Cattle_Y_T01101;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43454550	43454661	.	-	0	ID=Cattle_Y_C01668;Parent=Cattle_Y_T01101;gene_id=Cattle_Y_G00710;transcript_id=Cattle_Y_T01101;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43455454	43456002	.	-	0	ID=Cattle_Y_C01669;Parent=Cattle_Y_T01101;gene_id=Cattle_Y_G00710;transcript_id=Cattle_Y_T01101;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	43469478	43471909	.	-	.	ID=Cattle_Y_G00711;Dbxref=GeneID:132344483;Name=LOC132344483;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344483;gene_biotype=protein_coding;gene_id=Cattle_Y_G00711;source_id=gene-LOC132344483
haplotype2-0000357	CAT	mRNA	43469480	43471909	.	-	.	ID=Cattle_Y_T01102;Parent=Cattle_Y_G00711;Dbxref=GeneID:132344483,GenBank:XM_059884094.1;Name=XM_059884094.1;gbkey=mRNA;gene=LOC132344483;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 3 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T01102;gene_id=Cattle_Y_G00711;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884094.1
haplotype2-0000357	CAT	exon	43469480	43469825	.	-	.	ID=Cattle_Y_E02034;Parent=Cattle_Y_T01102;Dbxref=GeneID:132344483,GenBank:XM_059884094.1;gbkey=mRNA;gene=LOC132344483;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01102;gene_id=Cattle_Y_G00711;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884094.1-5
haplotype2-0000357	CAT	exon	43469945	43470090	.	-	.	ID=Cattle_Y_E02035;Parent=Cattle_Y_T01102;Dbxref=GeneID:132344483,GenBank:XM_059884094.1;gbkey=mRNA;gene=LOC132344483;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01102;gene_id=Cattle_Y_G00711;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884094.1-5
haplotype2-0000357	CAT	exon	43470232	43470343	.	-	.	ID=Cattle_Y_E02036;Parent=Cattle_Y_T01102;Dbxref=GeneID:132344483,GenBank:XM_059884094.1;gbkey=mRNA;gene=LOC132344483;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01102;gene_id=Cattle_Y_G00711;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884094.1-5
haplotype2-0000357	CAT	exon	43470486	43470563	.	-	.	ID=Cattle_Y_E02037;Parent=Cattle_Y_T01102;Dbxref=GeneID:132344483,GenBank:XM_059884094.1;gbkey=mRNA;gene=LOC132344483;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01102;gene_id=Cattle_Y_G00711;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884094.1-5
haplotype2-0000357	CAT	exon	43471157	43471909	.	-	.	ID=Cattle_Y_E02038;Parent=Cattle_Y_T01102;Dbxref=GeneID:132344483,GenBank:XM_059884094.1;gbkey=mRNA;gene=LOC132344483;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01102;gene_id=Cattle_Y_G00711;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884094.1-1
haplotype2-0000357	CAT	CDS	43469625	43469825	.	-	0	ID=Cattle_Y_C01670;Parent=Cattle_Y_T01102;gene_id=Cattle_Y_G00711;transcript_id=Cattle_Y_T01102;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43469945	43470090	.	-	2	ID=Cattle_Y_C01671;Parent=Cattle_Y_T01102;gene_id=Cattle_Y_G00711;transcript_id=Cattle_Y_T01102;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43470232	43470343	.	-	0	ID=Cattle_Y_C01672;Parent=Cattle_Y_T01102;gene_id=Cattle_Y_G00711;transcript_id=Cattle_Y_T01102;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43470486	43470563	.	-	0	ID=Cattle_Y_C01673;Parent=Cattle_Y_T01102;gene_id=Cattle_Y_G00711;transcript_id=Cattle_Y_T01102;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43471157	43471684	.	-	0	ID=Cattle_Y_C01674;Parent=Cattle_Y_T01102;gene_id=Cattle_Y_G00711;transcript_id=Cattle_Y_T01102;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	43469478	43471909	.	-	.	ID=Cattle_Y_T01103;Parent=Cattle_Y_G00711;Dbxref=GeneID:132344483,GenBank:XM_059884095.1;Name=XM_059884095.1;gbkey=mRNA;gene=LOC132344483;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T01103;gene_id=Cattle_Y_G00711;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884095.1
haplotype2-0000357	CAT	exon	43469478	43469825	.	-	.	ID=Cattle_Y_E02039;Parent=Cattle_Y_T01103;Dbxref=GeneID:132344483,GenBank:XM_059884095.1;gbkey=mRNA;gene=LOC132344483;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01103;gene_id=Cattle_Y_G00711;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884095.1-4
haplotype2-0000357	CAT	exon	43469945	43470090	.	-	.	ID=Cattle_Y_E02040;Parent=Cattle_Y_T01103;Dbxref=GeneID:132344483,GenBank:XM_059884095.1;gbkey=mRNA;gene=LOC132344483;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01103;gene_id=Cattle_Y_G00711;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884095.1-4
haplotype2-0000357	CAT	exon	43470232	43470343	.	-	.	ID=Cattle_Y_E02041;Parent=Cattle_Y_T01103;Dbxref=GeneID:132344483,GenBank:XM_059884095.1;gbkey=mRNA;gene=LOC132344483;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01103;gene_id=Cattle_Y_G00711;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884095.1-4
haplotype2-0000357	CAT	exon	43471136	43471909	.	-	.	ID=Cattle_Y_E02042;Parent=Cattle_Y_T01103;Dbxref=GeneID:132344483,GenBank:XM_059884095.1;gbkey=mRNA;gene=LOC132344483;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01103;gene_id=Cattle_Y_G00711;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884095.1-1
haplotype2-0000357	CAT	CDS	43469625	43469825	.	-	0	ID=Cattle_Y_C01675;Parent=Cattle_Y_T01103;gene_id=Cattle_Y_G00711;transcript_id=Cattle_Y_T01103;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43469945	43470090	.	-	2	ID=Cattle_Y_C01676;Parent=Cattle_Y_T01103;gene_id=Cattle_Y_G00711;transcript_id=Cattle_Y_T01103;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43470232	43470343	.	-	0	ID=Cattle_Y_C01677;Parent=Cattle_Y_T01103;gene_id=Cattle_Y_G00711;transcript_id=Cattle_Y_T01103;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43471136	43471684	.	-	0	ID=Cattle_Y_C01678;Parent=Cattle_Y_T01103;gene_id=Cattle_Y_G00711;transcript_id=Cattle_Y_T01103;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	43483942	43487591	.	-	.	ID=Cattle_Y_G00712;Dbxref=GeneID:132344480;Name=LOC132344480;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344480;gene_biotype=protein_coding;gene_id=Cattle_Y_G00712;source_id=gene-LOC132344480
haplotype2-0000357	CAT	mRNA	43483942	43487590	.	-	.	ID=Cattle_Y_T01104;Parent=Cattle_Y_G00712;Dbxref=GeneID:132344480,GenBank:XM_059884088.1;Name=XM_059884088.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344480;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 2 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T01104;gene_id=Cattle_Y_G00712;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884088.1
haplotype2-0000357	CAT	exon	43483942	43484161	.	-	.	ID=Cattle_Y_E02043;Parent=Cattle_Y_T01104;Dbxref=GeneID:132344480,GenBank:XM_059884088.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344480;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01104;gene_id=Cattle_Y_G00712;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884088.1-6
haplotype2-0000357	CAT	exon	43485420	43485506	.	-	.	ID=Cattle_Y_E02044;Parent=Cattle_Y_T01104;Dbxref=GeneID:132344480,GenBank:XM_059884088.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344480;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01104;gene_id=Cattle_Y_G00712;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884088.1-5
haplotype2-0000357	CAT	exon	43485626	43485771	.	-	.	ID=Cattle_Y_E02045;Parent=Cattle_Y_T01104;Dbxref=GeneID:132344480,GenBank:XM_059884088.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344480;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01104;gene_id=Cattle_Y_G00712;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884088.1-4
haplotype2-0000357	CAT	exon	43485913	43486024	.	-	.	ID=Cattle_Y_E02046;Parent=Cattle_Y_T01104;Dbxref=GeneID:132344480,GenBank:XM_059884088.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344480;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01104;gene_id=Cattle_Y_G00712;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884088.1-3
haplotype2-0000357	CAT	exon	43486167	43486244	.	-	.	ID=Cattle_Y_E02047;Parent=Cattle_Y_T01104;Dbxref=GeneID:132344480,GenBank:XM_059884088.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344480;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01104;gene_id=Cattle_Y_G00712;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884088.1-2
haplotype2-0000357	CAT	exon	43486838	43487590	.	-	.	ID=Cattle_Y_E02048;Parent=Cattle_Y_T01104;Dbxref=GeneID:132344480,GenBank:XM_059884088.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344480;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01104;gene_id=Cattle_Y_G00712;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884088.1-1
haplotype2-0000357	CAT	CDS	43484138	43484161	.	-	0	ID=Cattle_Y_C01679;Parent=Cattle_Y_T01104;Dbxref=GeneID:132344480,GenBank:XP_059740071.1;Name=XP_059740071.1;gbkey=CDS;gene=LOC132344480;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740071.1;gene_id=Cattle_Y_G00712;transcript_id=Cattle_Y_T01104;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43485420	43485506	.	-	0	ID=Cattle_Y_C01680;Parent=Cattle_Y_T01104;Dbxref=GeneID:132344480,GenBank:XP_059740071.1;Name=XP_059740071.1;gbkey=CDS;gene=LOC132344480;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740071.1;gene_id=Cattle_Y_G00712;transcript_id=Cattle_Y_T01104;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43485626	43485771	.	-	2	ID=Cattle_Y_C01681;Parent=Cattle_Y_T01104;Dbxref=GeneID:132344480,GenBank:XP_059740071.1;Name=XP_059740071.1;gbkey=CDS;gene=LOC132344480;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740071.1;gene_id=Cattle_Y_G00712;transcript_id=Cattle_Y_T01104;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43485913	43486024	.	-	0	ID=Cattle_Y_C01682;Parent=Cattle_Y_T01104;Dbxref=GeneID:132344480,GenBank:XP_059740071.1;Name=XP_059740071.1;gbkey=CDS;gene=LOC132344480;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740071.1;gene_id=Cattle_Y_G00712;transcript_id=Cattle_Y_T01104;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43486167	43486244	.	-	0	ID=Cattle_Y_C01683;Parent=Cattle_Y_T01104;Dbxref=GeneID:132344480,GenBank:XP_059740071.1;Name=XP_059740071.1;gbkey=CDS;gene=LOC132344480;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740071.1;gene_id=Cattle_Y_G00712;transcript_id=Cattle_Y_T01104;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43486838	43487365	.	-	0	ID=Cattle_Y_C01684;Parent=Cattle_Y_T01104;Dbxref=GeneID:132344480,GenBank:XP_059740071.1;Name=XP_059740071.1;gbkey=CDS;gene=LOC132344480;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740071.1;gene_id=Cattle_Y_G00712;transcript_id=Cattle_Y_T01104;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	43483942	43487591	.	-	.	ID=Cattle_Y_T01105;Parent=Cattle_Y_G00712;Dbxref=GeneID:132344480,GenBank:XM_059884089.1;Name=XM_059884089.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344480;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T01105;gene_id=Cattle_Y_G00712;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884089.1
haplotype2-0000357	CAT	exon	43483942	43484161	.	-	.	ID=Cattle_Y_E02049;Parent=Cattle_Y_T01105;Dbxref=GeneID:132344480,GenBank:XM_059884089.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344480;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01105;gene_id=Cattle_Y_G00712;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884089.1-5
haplotype2-0000357	CAT	exon	43485420	43485506	.	-	.	ID=Cattle_Y_E02050;Parent=Cattle_Y_T01105;Dbxref=GeneID:132344480,GenBank:XM_059884089.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344480;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01105;gene_id=Cattle_Y_G00712;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884089.1-4
haplotype2-0000357	CAT	exon	43485626	43485771	.	-	.	ID=Cattle_Y_E02051;Parent=Cattle_Y_T01105;Dbxref=GeneID:132344480,GenBank:XM_059884089.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344480;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01105;gene_id=Cattle_Y_G00712;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884089.1-3
haplotype2-0000357	CAT	exon	43485913	43486024	.	-	.	ID=Cattle_Y_E02052;Parent=Cattle_Y_T01105;Dbxref=GeneID:132344480,GenBank:XM_059884089.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344480;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01105;gene_id=Cattle_Y_G00712;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884089.1-2
haplotype2-0000357	CAT	exon	43486817	43487591	.	-	.	ID=Cattle_Y_E02053;Parent=Cattle_Y_T01105;Dbxref=GeneID:132344480,GenBank:XM_059884089.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344480;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01105;gene_id=Cattle_Y_G00712;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884089.1-1
haplotype2-0000357	CAT	CDS	43484138	43484161	.	-	0	ID=Cattle_Y_C01685;Parent=Cattle_Y_T01105;Dbxref=GeneID:132344480,GenBank:XP_059740072.1;Name=XP_059740072.1;gbkey=CDS;gene=LOC132344480;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740072.1;gene_id=Cattle_Y_G00712;transcript_id=Cattle_Y_T01105;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43485420	43485506	.	-	0	ID=Cattle_Y_C01686;Parent=Cattle_Y_T01105;Dbxref=GeneID:132344480,GenBank:XP_059740072.1;Name=XP_059740072.1;gbkey=CDS;gene=LOC132344480;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740072.1;gene_id=Cattle_Y_G00712;transcript_id=Cattle_Y_T01105;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43485626	43485771	.	-	2	ID=Cattle_Y_C01687;Parent=Cattle_Y_T01105;Dbxref=GeneID:132344480,GenBank:XP_059740072.1;Name=XP_059740072.1;gbkey=CDS;gene=LOC132344480;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740072.1;gene_id=Cattle_Y_G00712;transcript_id=Cattle_Y_T01105;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43485913	43486024	.	-	0	ID=Cattle_Y_C01688;Parent=Cattle_Y_T01105;Dbxref=GeneID:132344480,GenBank:XP_059740072.1;Name=XP_059740072.1;gbkey=CDS;gene=LOC132344480;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740072.1;gene_id=Cattle_Y_G00712;transcript_id=Cattle_Y_T01105;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43486817	43487365	.	-	0	ID=Cattle_Y_C01689;Parent=Cattle_Y_T01105;Dbxref=GeneID:132344480,GenBank:XP_059740072.1;Name=XP_059740072.1;gbkey=CDS;gene=LOC132344480;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740072.1;gene_id=Cattle_Y_G00712;transcript_id=Cattle_Y_T01105;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	43499617	43503266	.	-	.	ID=Cattle_Y_G00713;Dbxref=GeneID:132344481;Name=LOC132344481;description=testis-specific Y-encoded protein 3-like;gbkey=Gene;gene=LOC132344481;gene_biotype=protein_coding;gene_id=Cattle_Y_G00713;source_id=gene-LOC132344481
haplotype2-0000357	CAT	mRNA	43499617	43503265	.	-	.	ID=Cattle_Y_T01106;Parent=Cattle_Y_G00713;Dbxref=GeneID:132344481,GenBank:XM_059884090.1;Name=XM_059884090.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344481;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 2 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X1;transcript_id=Cattle_Y_T01106;gene_id=Cattle_Y_G00713;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884090.1
haplotype2-0000357	CAT	exon	43499617	43499836	.	-	.	ID=Cattle_Y_E02054;Parent=Cattle_Y_T01106;Dbxref=GeneID:132344481,GenBank:XM_059884090.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344481;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01106;gene_id=Cattle_Y_G00713;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884090.1-6
haplotype2-0000357	CAT	exon	43501095	43501181	.	-	.	ID=Cattle_Y_E02055;Parent=Cattle_Y_T01106;Dbxref=GeneID:132344481,GenBank:XM_059884090.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344481;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01106;gene_id=Cattle_Y_G00713;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884090.1-5
haplotype2-0000357	CAT	exon	43501301	43501446	.	-	.	ID=Cattle_Y_E02056;Parent=Cattle_Y_T01106;Dbxref=GeneID:132344481,GenBank:XM_059884090.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344481;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01106;gene_id=Cattle_Y_G00713;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884090.1-4
haplotype2-0000357	CAT	exon	43501588	43501699	.	-	.	ID=Cattle_Y_E02057;Parent=Cattle_Y_T01106;Dbxref=GeneID:132344481,GenBank:XM_059884090.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344481;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01106;gene_id=Cattle_Y_G00713;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884090.1-3
haplotype2-0000357	CAT	exon	43501842	43501919	.	-	.	ID=Cattle_Y_E02058;Parent=Cattle_Y_T01106;Dbxref=GeneID:132344481,GenBank:XM_059884090.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344481;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01106;gene_id=Cattle_Y_G00713;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884090.1-2
haplotype2-0000357	CAT	exon	43502513	43503265	.	-	.	ID=Cattle_Y_E02059;Parent=Cattle_Y_T01106;Dbxref=GeneID:132344481,GenBank:XM_059884090.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344481;product=testis-specific Y-encoded protein 3-like, transcript variant X1;transcript_id=Cattle_Y_T01106;gene_id=Cattle_Y_G00713;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884090.1-1
haplotype2-0000357	CAT	CDS	43499813	43499836	.	-	0	ID=Cattle_Y_C01690;Parent=Cattle_Y_T01106;Dbxref=GeneID:132344481,GenBank:XP_059740073.1;Name=XP_059740073.1;gbkey=CDS;gene=LOC132344481;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740073.1;gene_id=Cattle_Y_G00713;transcript_id=Cattle_Y_T01106;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43501095	43501181	.	-	0	ID=Cattle_Y_C01691;Parent=Cattle_Y_T01106;Dbxref=GeneID:132344481,GenBank:XP_059740073.1;Name=XP_059740073.1;gbkey=CDS;gene=LOC132344481;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740073.1;gene_id=Cattle_Y_G00713;transcript_id=Cattle_Y_T01106;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43501301	43501446	.	-	2	ID=Cattle_Y_C01692;Parent=Cattle_Y_T01106;Dbxref=GeneID:132344481,GenBank:XP_059740073.1;Name=XP_059740073.1;gbkey=CDS;gene=LOC132344481;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740073.1;gene_id=Cattle_Y_G00713;transcript_id=Cattle_Y_T01106;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43501588	43501699	.	-	0	ID=Cattle_Y_C01693;Parent=Cattle_Y_T01106;Dbxref=GeneID:132344481,GenBank:XP_059740073.1;Name=XP_059740073.1;gbkey=CDS;gene=LOC132344481;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740073.1;gene_id=Cattle_Y_G00713;transcript_id=Cattle_Y_T01106;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43501842	43501919	.	-	0	ID=Cattle_Y_C01694;Parent=Cattle_Y_T01106;Dbxref=GeneID:132344481,GenBank:XP_059740073.1;Name=XP_059740073.1;gbkey=CDS;gene=LOC132344481;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740073.1;gene_id=Cattle_Y_G00713;transcript_id=Cattle_Y_T01106;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43502513	43503040	.	-	0	ID=Cattle_Y_C01695;Parent=Cattle_Y_T01106;Dbxref=GeneID:132344481,GenBank:XP_059740073.1;Name=XP_059740073.1;gbkey=CDS;gene=LOC132344481;product=testis-specific Y-encoded protein 3-like isoform X1;protein_id=XP_059740073.1;gene_id=Cattle_Y_G00713;transcript_id=Cattle_Y_T01106;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	43499617	43503266	.	-	.	ID=Cattle_Y_T01107;Parent=Cattle_Y_G00713;Dbxref=GeneID:132344481,GenBank:XM_059884091.1;Name=XM_059884091.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344481;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=testis-specific Y-encoded protein 3-like%2C transcript variant X2;transcript_id=Cattle_Y_T01107;gene_id=Cattle_Y_G00713;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884091.1
haplotype2-0000357	CAT	exon	43499617	43499836	.	-	.	ID=Cattle_Y_E02060;Parent=Cattle_Y_T01107;Dbxref=GeneID:132344481,GenBank:XM_059884091.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344481;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01107;gene_id=Cattle_Y_G00713;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884091.1-5
haplotype2-0000357	CAT	exon	43501095	43501181	.	-	.	ID=Cattle_Y_E02061;Parent=Cattle_Y_T01107;Dbxref=GeneID:132344481,GenBank:XM_059884091.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344481;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01107;gene_id=Cattle_Y_G00713;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884091.1-4
haplotype2-0000357	CAT	exon	43501301	43501446	.	-	.	ID=Cattle_Y_E02062;Parent=Cattle_Y_T01107;Dbxref=GeneID:132344481,GenBank:XM_059884091.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344481;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01107;gene_id=Cattle_Y_G00713;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884091.1-3
haplotype2-0000357	CAT	exon	43501588	43501699	.	-	.	ID=Cattle_Y_E02063;Parent=Cattle_Y_T01107;Dbxref=GeneID:132344481,GenBank:XM_059884091.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344481;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01107;gene_id=Cattle_Y_G00713;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884091.1-2
haplotype2-0000357	CAT	exon	43502492	43503266	.	-	.	ID=Cattle_Y_E02064;Parent=Cattle_Y_T01107;Dbxref=GeneID:132344481,GenBank:XM_059884091.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344481;product=testis-specific Y-encoded protein 3-like, transcript variant X2;transcript_id=Cattle_Y_T01107;gene_id=Cattle_Y_G00713;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884091.1-1
haplotype2-0000357	CAT	CDS	43499813	43499836	.	-	0	ID=Cattle_Y_C01696;Parent=Cattle_Y_T01107;Dbxref=GeneID:132344481,GenBank:XP_059740074.1;Name=XP_059740074.1;gbkey=CDS;gene=LOC132344481;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740074.1;gene_id=Cattle_Y_G00713;transcript_id=Cattle_Y_T01107;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43501095	43501181	.	-	0	ID=Cattle_Y_C01697;Parent=Cattle_Y_T01107;Dbxref=GeneID:132344481,GenBank:XP_059740074.1;Name=XP_059740074.1;gbkey=CDS;gene=LOC132344481;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740074.1;gene_id=Cattle_Y_G00713;transcript_id=Cattle_Y_T01107;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43501301	43501446	.	-	2	ID=Cattle_Y_C01698;Parent=Cattle_Y_T01107;Dbxref=GeneID:132344481,GenBank:XP_059740074.1;Name=XP_059740074.1;gbkey=CDS;gene=LOC132344481;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740074.1;gene_id=Cattle_Y_G00713;transcript_id=Cattle_Y_T01107;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43501588	43501699	.	-	0	ID=Cattle_Y_C01699;Parent=Cattle_Y_T01107;Dbxref=GeneID:132344481,GenBank:XP_059740074.1;Name=XP_059740074.1;gbkey=CDS;gene=LOC132344481;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740074.1;gene_id=Cattle_Y_G00713;transcript_id=Cattle_Y_T01107;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43502492	43503040	.	-	0	ID=Cattle_Y_C01700;Parent=Cattle_Y_T01107;Dbxref=GeneID:132344481,GenBank:XP_059740074.1;Name=XP_059740074.1;gbkey=CDS;gene=LOC132344481;product=testis-specific Y-encoded protein 3-like isoform X2;protein_id=XP_059740074.1;gene_id=Cattle_Y_G00713;transcript_id=Cattle_Y_T01107;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	43640910	43654731	.	+	.	ID=Cattle_Y_G00714;Dbxref=GeneID:132344434;Name=LOC132344434;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344434;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00714;source_id=gene-LOC132344434
haplotype2-0000357	CAT	exon	43640910	43641066	.	+	.	ID=Cattle_Y_T01108;Parent=Cattle_Y_G00714;Dbxref=GeneID:132344434;gbkey=exon;gene=LOC132344434;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00714;transcript_id=Cattle_Y_T01108;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344434-3
haplotype2-0000357	CAT	exon	43653039	43654619	.	+	.	ID=Cattle_Y_T01109;Parent=Cattle_Y_G00714;Dbxref=GeneID:132344434;gbkey=exon;gene=LOC132344434;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00714;transcript_id=Cattle_Y_T01109;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344434-2
haplotype2-0000357	CAT	exon	43654700	43654731	.	+	.	ID=Cattle_Y_T01110;Parent=Cattle_Y_G00714;Dbxref=GeneID:132344434;gbkey=exon;gene=LOC132344434;model_evidence=Supporting evidence includes similarity to: 4 Proteins;pseudo=true;gene_id=Cattle_Y_G00714;transcript_id=Cattle_Y_T01110;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344434
haplotype2-0000357	CAT	gene	43662497	43676014	.	+	.	ID=Cattle_Y_G00715;Dbxref=GeneID:132344433;Name=LOC132344433;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344433;gene_biotype=protein_coding;gene_id=Cattle_Y_G00715;source_id=gene-LOC132344433
haplotype2-0000357	CAT	mRNA	43662497	43676014	.	+	.	ID=Cattle_Y_T01111;Parent=Cattle_Y_G00715;Dbxref=GeneID:132344433,GenBank:XM_059884007.1;Name=XM_059884007.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon%3B deleted 2 bases in 1 codon;exception=unclassified transcription discrepancy;gbkey=mRNA;gene=LOC132344433;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 25%25 coverage of the annotated genomic feature by RNAseq alignments;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T01111;gene_id=Cattle_Y_G00715;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884007.1
haplotype2-0000357	CAT	exon	43662497	43662503	.	+	.	ID=Cattle_Y_E02065;Parent=Cattle_Y_T01111;Dbxref=GeneID:132344433,GenBank:XM_059884007.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon;deleted 2 bases in 1 codon;exception=unclassified transcription discrepancy;gbkey=mRNA;gene=LOC132344433;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T01111;gene_id=Cattle_Y_G00715;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884007.1-1
haplotype2-0000357	CAT	exon	43671841	43672427	.	+	.	ID=Cattle_Y_E02066;Parent=Cattle_Y_T01111;Dbxref=GeneID:132344433,GenBank:XM_059884007.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon;deleted 2 bases in 1 codon;exception=unclassified transcription discrepancy;gbkey=mRNA;gene=LOC132344433;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T01111;gene_id=Cattle_Y_G00715;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884007.1-1
haplotype2-0000357	CAT	exon	43672430	43673124	.	+	.	ID=Cattle_Y_E02067;Parent=Cattle_Y_T01111;Dbxref=GeneID:132344433,GenBank:XM_059884007.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon;deleted 2 bases in 1 codon;exception=unclassified transcription discrepancy;gbkey=mRNA;gene=LOC132344433;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T01111;gene_id=Cattle_Y_G00715;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884007.1-1
haplotype2-0000357	CAT	exon	43673126	43673198	.	+	.	ID=Cattle_Y_E02068;Parent=Cattle_Y_T01111;Dbxref=GeneID:132344433,GenBank:XM_059884007.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon;deleted 2 bases in 1 codon;exception=unclassified transcription discrepancy;gbkey=mRNA;gene=LOC132344433;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T01111;gene_id=Cattle_Y_G00715;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884007.1-1
haplotype2-0000357	CAT	exon	43673935	43674024	.	+	.	ID=Cattle_Y_E02069;Parent=Cattle_Y_T01111;Dbxref=GeneID:132344433,GenBank:XM_059884007.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon;deleted 2 bases in 1 codon;exception=unclassified transcription discrepancy;gbkey=mRNA;gene=LOC132344433;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T01111;gene_id=Cattle_Y_G00715;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884007.1-1
haplotype2-0000357	CAT	exon	43676003	43676014	.	+	.	ID=Cattle_Y_E02070;Parent=Cattle_Y_T01111;Dbxref=GeneID:132344433,GenBank:XM_059884007.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon;deleted 2 bases in 1 codon;exception=unclassified transcription discrepancy;gbkey=mRNA;gene=LOC132344433;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T01111;gene_id=Cattle_Y_G00715;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884007.1-6
haplotype2-0000357	CAT	CDS	43662497	43662503	.	+	0	ID=Cattle_Y_C01701;Parent=Cattle_Y_T01111;gene_id=Cattle_Y_G00715;transcript_id=Cattle_Y_T01111;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43671841	43672427	.	+	2	ID=Cattle_Y_C01702;Parent=Cattle_Y_T01111;gene_id=Cattle_Y_G00715;transcript_id=Cattle_Y_T01111;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43672430	43673124	.	+	0	ID=Cattle_Y_C01703;Parent=Cattle_Y_T01111;gene_id=Cattle_Y_G00715;transcript_id=Cattle_Y_T01111;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43673126	43673198	.	+	1	ID=Cattle_Y_C01704;Parent=Cattle_Y_T01111;gene_id=Cattle_Y_G00715;transcript_id=Cattle_Y_T01111;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43673935	43674024	.	+	0	ID=Cattle_Y_C01705;Parent=Cattle_Y_T01111;gene_id=Cattle_Y_G00715;transcript_id=Cattle_Y_T01111;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43676003	43676014	.	+	0	ID=Cattle_Y_C01706;Parent=Cattle_Y_T01111;gene_id=Cattle_Y_G00715;transcript_id=Cattle_Y_T01111;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	43794588	43796240	.	-	.	ID=Cattle_Y_G00716;Dbxref=GeneID:132344624;Name=LOC132344624;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344624;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00716;source_id=gene-LOC132344624
haplotype2-0000357	CAT	exon	43794588	43795305	.	-	.	ID=Cattle_Y_T01112;Parent=Cattle_Y_G00716;Dbxref=GeneID:132344624;gbkey=exon;gene=LOC132344624;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00716;transcript_id=Cattle_Y_T01112;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344624-2
haplotype2-0000357	CAT	exon	43795741	43796240	.	-	.	ID=Cattle_Y_T01113;Parent=Cattle_Y_G00716;Dbxref=GeneID:132344624;gbkey=exon;gene=LOC132344624;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00716;transcript_id=Cattle_Y_T01113;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344624
haplotype2-0000357	CAT	gene	43834936	43847160	.	-	.	ID=Cattle_Y_G00717;Dbxref=GeneID:132344470;Name=LOC132344470;description=melanoma antigen preferentially expressed in tumors;gbkey=Gene;gene=LOC132344470;gene_biotype=protein_coding;gene_id=Cattle_Y_G00717;source_id=gene-LOC132344470
haplotype2-0000357	CAT	mRNA	43834936	43847160	.	-	.	ID=Cattle_Y_T01114;Parent=Cattle_Y_G00717;Dbxref=GeneID:132344470,GenBank:XM_059884066.1;Name=XM_059884066.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344470;model_evidence=Supporting evidence includes similarity to: 1 mRNA%2C 12 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors%2C transcript variant X1;transcript_id=Cattle_Y_T01114;gene_id=Cattle_Y_G00717;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884066.1
haplotype2-0000357	CAT	exon	43834936	43835815	.	-	.	ID=Cattle_Y_E02071;Parent=Cattle_Y_T01114;Dbxref=GeneID:132344470,GenBank:XM_059884066.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors, transcript variant X1;transcript_id=Cattle_Y_T01114;gene_id=Cattle_Y_G00717;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884066.1-6
haplotype2-0000357	CAT	exon	43836997	43837602	.	-	.	ID=Cattle_Y_E02072;Parent=Cattle_Y_T01114;Dbxref=GeneID:132344470,GenBank:XM_059884066.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors, transcript variant X1;transcript_id=Cattle_Y_T01114;gene_id=Cattle_Y_G00717;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884066.1-5
haplotype2-0000357	CAT	exon	43837880	43838199	.	-	.	ID=Cattle_Y_E02073;Parent=Cattle_Y_T01114;Dbxref=GeneID:132344470,GenBank:XM_059884066.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors, transcript variant X1;transcript_id=Cattle_Y_T01114;gene_id=Cattle_Y_G00717;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884066.1-4
haplotype2-0000357	CAT	exon	43839489	43839577	.	-	.	ID=Cattle_Y_E02074;Parent=Cattle_Y_T01114;Dbxref=GeneID:132344470,GenBank:XM_059884066.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors, transcript variant X1;transcript_id=Cattle_Y_T01114;gene_id=Cattle_Y_G00717;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884066.1-3
haplotype2-0000357	CAT	exon	43846373	43846504	.	-	.	ID=Cattle_Y_E02075;Parent=Cattle_Y_T01114;Dbxref=GeneID:132344470,GenBank:XM_059884066.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors, transcript variant X1;transcript_id=Cattle_Y_T01114;gene_id=Cattle_Y_G00717;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884066.1-2
haplotype2-0000357	CAT	exon	43847001	43847160	.	-	.	ID=Cattle_Y_E02076;Parent=Cattle_Y_T01114;Dbxref=GeneID:132344470,GenBank:XM_059884066.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors, transcript variant X1;transcript_id=Cattle_Y_T01114;gene_id=Cattle_Y_G00717;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884066.1-1
haplotype2-0000357	CAT	CDS	43835239	43835815	.	-	1	ID=Cattle_Y_C01707;Parent=Cattle_Y_T01114;Dbxref=GeneID:132344470,GenBank:XP_059740049.1;Name=XP_059740049.1;gbkey=CDS;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059740049.1;gene_id=Cattle_Y_G00717;transcript_id=Cattle_Y_T01114;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43836997	43837602	.	-	1	ID=Cattle_Y_C01708;Parent=Cattle_Y_T01114;Dbxref=GeneID:132344470,GenBank:XP_059740049.1;Name=XP_059740049.1;gbkey=CDS;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059740049.1;gene_id=Cattle_Y_G00717;transcript_id=Cattle_Y_T01114;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43837880	43838199	.	-	0	ID=Cattle_Y_C01709;Parent=Cattle_Y_T01114;Dbxref=GeneID:132344470,GenBank:XP_059740049.1;Name=XP_059740049.1;gbkey=CDS;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059740049.1;gene_id=Cattle_Y_G00717;transcript_id=Cattle_Y_T01114;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43839489	43839524	.	-	0	ID=Cattle_Y_C01710;Parent=Cattle_Y_T01114;Dbxref=GeneID:132344470,GenBank:XP_059740049.1;Name=XP_059740049.1;gbkey=CDS;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059740049.1;gene_id=Cattle_Y_G00717;transcript_id=Cattle_Y_T01114;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	43834936	43847160	.	-	.	ID=Cattle_Y_T01115;Parent=Cattle_Y_G00717;Dbxref=GeneID:132344470,GenBank:XM_059884067.1;Name=XM_059884067.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344470;model_evidence=Supporting evidence includes similarity to: 1 mRNA%2C 12 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors%2C transcript variant X2;transcript_id=Cattle_Y_T01115;gene_id=Cattle_Y_G00717;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884067.1
haplotype2-0000357	CAT	exon	43834936	43835815	.	-	.	ID=Cattle_Y_E02077;Parent=Cattle_Y_T01115;Dbxref=GeneID:132344470,GenBank:XM_059884067.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors, transcript variant X2;transcript_id=Cattle_Y_T01115;gene_id=Cattle_Y_G00717;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884067.1-6
haplotype2-0000357	CAT	exon	43836997	43837602	.	-	.	ID=Cattle_Y_E02078;Parent=Cattle_Y_T01115;Dbxref=GeneID:132344470,GenBank:XM_059884067.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors, transcript variant X2;transcript_id=Cattle_Y_T01115;gene_id=Cattle_Y_G00717;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884067.1-5
haplotype2-0000357	CAT	exon	43837880	43838199	.	-	.	ID=Cattle_Y_E02079;Parent=Cattle_Y_T01115;Dbxref=GeneID:132344470,GenBank:XM_059884067.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors, transcript variant X2;transcript_id=Cattle_Y_T01115;gene_id=Cattle_Y_G00717;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884067.1-4
haplotype2-0000357	CAT	exon	43839489	43839577	.	-	.	ID=Cattle_Y_E02080;Parent=Cattle_Y_T01115;Dbxref=GeneID:132344470,GenBank:XM_059884067.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors, transcript variant X2;transcript_id=Cattle_Y_T01115;gene_id=Cattle_Y_G00717;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884067.1-3
haplotype2-0000357	CAT	exon	43846373	43846481	.	-	.	ID=Cattle_Y_E02081;Parent=Cattle_Y_T01115;Dbxref=GeneID:132344470,GenBank:XM_059884067.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors, transcript variant X2;transcript_id=Cattle_Y_T01115;gene_id=Cattle_Y_G00717;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884067.1-2
haplotype2-0000357	CAT	exon	43847001	43847160	.	-	.	ID=Cattle_Y_E02082;Parent=Cattle_Y_T01115;Dbxref=GeneID:132344470,GenBank:XM_059884067.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors, transcript variant X2;transcript_id=Cattle_Y_T01115;gene_id=Cattle_Y_G00717;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884067.1-1
haplotype2-0000357	CAT	CDS	43835239	43835815	.	-	1	ID=Cattle_Y_C01711;Parent=Cattle_Y_T01115;Dbxref=GeneID:132344470,GenBank:XP_059740050.1;Name=XP_059740050.1;gbkey=CDS;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059740050.1;gene_id=Cattle_Y_G00717;transcript_id=Cattle_Y_T01115;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43836997	43837602	.	-	1	ID=Cattle_Y_C01712;Parent=Cattle_Y_T01115;Dbxref=GeneID:132344470,GenBank:XP_059740050.1;Name=XP_059740050.1;gbkey=CDS;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059740050.1;gene_id=Cattle_Y_G00717;transcript_id=Cattle_Y_T01115;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43837880	43838199	.	-	0	ID=Cattle_Y_C01713;Parent=Cattle_Y_T01115;Dbxref=GeneID:132344470,GenBank:XP_059740050.1;Name=XP_059740050.1;gbkey=CDS;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059740050.1;gene_id=Cattle_Y_G00717;transcript_id=Cattle_Y_T01115;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43839489	43839524	.	-	0	ID=Cattle_Y_C01714;Parent=Cattle_Y_T01115;Dbxref=GeneID:132344470,GenBank:XP_059740050.1;Name=XP_059740050.1;gbkey=CDS;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors isoform X1;protein_id=XP_059740050.1;gene_id=Cattle_Y_G00717;transcript_id=Cattle_Y_T01115;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	43834936	43847160	.	-	.	ID=Cattle_Y_T01116;Parent=Cattle_Y_G00717;Dbxref=GeneID:132344470,GenBank:XM_059884068.1;Name=XM_059884068.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344470;model_evidence=Supporting evidence includes similarity to: 1 mRNA%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors%2C transcript variant X3;transcript_id=Cattle_Y_T01116;gene_id=Cattle_Y_G00717;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884068.1
haplotype2-0000357	CAT	exon	43834936	43835815	.	-	.	ID=Cattle_Y_E02083;Parent=Cattle_Y_T01116;Dbxref=GeneID:132344470,GenBank:XM_059884068.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors, transcript variant X3;transcript_id=Cattle_Y_T01116;gene_id=Cattle_Y_G00717;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884068.1-7
haplotype2-0000357	CAT	exon	43836997	43837109	.	-	.	ID=Cattle_Y_E02084;Parent=Cattle_Y_T01116;Dbxref=GeneID:132344470,GenBank:XM_059884068.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors, transcript variant X3;transcript_id=Cattle_Y_T01116;gene_id=Cattle_Y_G00717;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884068.1-6
haplotype2-0000357	CAT	exon	43837233	43837602	.	-	.	ID=Cattle_Y_E02085;Parent=Cattle_Y_T01116;Dbxref=GeneID:132344470,GenBank:XM_059884068.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors, transcript variant X3;transcript_id=Cattle_Y_T01116;gene_id=Cattle_Y_G00717;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884068.1-5
haplotype2-0000357	CAT	exon	43837880	43838199	.	-	.	ID=Cattle_Y_E02086;Parent=Cattle_Y_T01116;Dbxref=GeneID:132344470,GenBank:XM_059884068.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors, transcript variant X3;transcript_id=Cattle_Y_T01116;gene_id=Cattle_Y_G00717;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884068.1-4
haplotype2-0000357	CAT	exon	43839489	43839577	.	-	.	ID=Cattle_Y_E02087;Parent=Cattle_Y_T01116;Dbxref=GeneID:132344470,GenBank:XM_059884068.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors, transcript variant X3;transcript_id=Cattle_Y_T01116;gene_id=Cattle_Y_G00717;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884068.1-3
haplotype2-0000357	CAT	exon	43846373	43846504	.	-	.	ID=Cattle_Y_E02088;Parent=Cattle_Y_T01116;Dbxref=GeneID:132344470,GenBank:XM_059884068.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors, transcript variant X3;transcript_id=Cattle_Y_T01116;gene_id=Cattle_Y_G00717;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884068.1-2
haplotype2-0000357	CAT	exon	43847001	43847160	.	-	.	ID=Cattle_Y_E02089;Parent=Cattle_Y_T01116;Dbxref=GeneID:132344470,GenBank:XM_059884068.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors, transcript variant X3;transcript_id=Cattle_Y_T01116;gene_id=Cattle_Y_G00717;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884068.1-1
haplotype2-0000357	CAT	CDS	43835239	43835815	.	-	1	ID=Cattle_Y_C01715;Parent=Cattle_Y_T01116;Dbxref=GeneID:132344470,GenBank:XP_059740051.1;Name=XP_059740051.1;gbkey=CDS;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors isoform X2;protein_id=XP_059740051.1;gene_id=Cattle_Y_G00717;transcript_id=Cattle_Y_T01116;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43836997	43837109	.	-	0	ID=Cattle_Y_C01716;Parent=Cattle_Y_T01116;Dbxref=GeneID:132344470,GenBank:XP_059740051.1;Name=XP_059740051.1;gbkey=CDS;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors isoform X2;protein_id=XP_059740051.1;gene_id=Cattle_Y_G00717;transcript_id=Cattle_Y_T01116;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43837233	43837602	.	-	1	ID=Cattle_Y_C01717;Parent=Cattle_Y_T01116;Dbxref=GeneID:132344470,GenBank:XP_059740051.1;Name=XP_059740051.1;gbkey=CDS;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors isoform X2;protein_id=XP_059740051.1;gene_id=Cattle_Y_G00717;transcript_id=Cattle_Y_T01116;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43837880	43838199	.	-	0	ID=Cattle_Y_C01718;Parent=Cattle_Y_T01116;Dbxref=GeneID:132344470,GenBank:XP_059740051.1;Name=XP_059740051.1;gbkey=CDS;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors isoform X2;protein_id=XP_059740051.1;gene_id=Cattle_Y_G00717;transcript_id=Cattle_Y_T01116;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43839489	43839524	.	-	0	ID=Cattle_Y_C01719;Parent=Cattle_Y_T01116;Dbxref=GeneID:132344470,GenBank:XP_059740051.1;Name=XP_059740051.1;gbkey=CDS;gene=LOC132344470;product=melanoma antigen preferentially expressed in tumors isoform X2;protein_id=XP_059740051.1;gene_id=Cattle_Y_G00717;transcript_id=Cattle_Y_T01116;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	43892551	43894473	.	+	.	ID=Cattle_Y_G00718;Dbxref=GeneID:132344432;Name=LOC132344432;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344432;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00718;source_id=gene-LOC132344432
haplotype2-0000357	CAT	exon	43892551	43892737	.	+	.	ID=Cattle_Y_T01117;Parent=Cattle_Y_G00718;Dbxref=GeneID:132344432;gbkey=exon;gene=LOC132344432;model_evidence=Supporting evidence includes similarity to: 2 Proteins;pseudo=true;gene_id=Cattle_Y_G00718;transcript_id=Cattle_Y_T01117;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344432-3
haplotype2-0000357	CAT	exon	43892810	43893300	.	+	.	ID=Cattle_Y_T01118;Parent=Cattle_Y_G00718;Dbxref=GeneID:132344432;gbkey=exon;gene=LOC132344432;model_evidence=Supporting evidence includes similarity to: 2 Proteins;pseudo=true;gene_id=Cattle_Y_G00718;transcript_id=Cattle_Y_T01118;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344432-2
haplotype2-0000357	CAT	exon	43894405	43894473	.	+	.	ID=Cattle_Y_T01119;Parent=Cattle_Y_G00718;Dbxref=GeneID:132344432;gbkey=exon;gene=LOC132344432;model_evidence=Supporting evidence includes similarity to: 2 Proteins;pseudo=true;gene_id=Cattle_Y_G00718;transcript_id=Cattle_Y_T01119;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344432
haplotype2-0000357	CAT	gene	43905465	43906903	.	-	.	ID=Cattle_Y_G00719;Dbxref=GeneID:132344431;Name=LOC132344431;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344431;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00719;source_id=gene-LOC132344431
haplotype2-0000357	CAT	exon	43905465	43906548	.	-	.	ID=Cattle_Y_T01120;Parent=Cattle_Y_G00719;Dbxref=GeneID:132344431;gbkey=exon;gene=LOC132344431;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 8%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00719;transcript_id=Cattle_Y_T01120;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344431-2
haplotype2-0000357	CAT	exon	43906715	43906903	.	-	.	ID=Cattle_Y_T01121;Parent=Cattle_Y_G00719;Dbxref=GeneID:132344431;gbkey=exon;gene=LOC132344431;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 8%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00719;transcript_id=Cattle_Y_T01121;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344431
haplotype2-0000357	CAT	gene	43923405	43925254	.	-	.	ID=Cattle_Y_G00720;Dbxref=GeneID:132344430;Name=LOC132344430;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344430;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00720;source_id=gene-LOC132344430
haplotype2-0000357	CAT	exon	43923405	43924443	.	-	.	ID=Cattle_Y_T01122;Parent=Cattle_Y_G00720;Dbxref=GeneID:132344430;gbkey=exon;gene=LOC132344430;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00720;transcript_id=Cattle_Y_T01122;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344430-2
haplotype2-0000357	CAT	exon	43924699	43925254	.	-	.	ID=Cattle_Y_T01123;Parent=Cattle_Y_G00720;Dbxref=GeneID:132344430;gbkey=exon;gene=LOC132344430;model_evidence=Supporting evidence includes similarity to: 3 Proteins;pseudo=true;gene_id=Cattle_Y_G00720;transcript_id=Cattle_Y_T01123;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344430
haplotype2-0000357	CAT	gene	43936438	43941821	.	-	.	ID=Cattle_Y_G00721;Dbxref=GeneID:132344623;Name=LOC132344623;description=melanoma antigen preferentially expressed in tumors;gbkey=Gene;gene=LOC132344623;gene_biotype=protein_coding;gene_id=Cattle_Y_G00721;source_id=gene-LOC132344623
haplotype2-0000357	CAT	mRNA	43936438	43941821	.	-	.	ID=Cattle_Y_T01124;Parent=Cattle_Y_G00721;Dbxref=GeneID:132344623,GenBank:XM_059884282.1;Name=XM_059884282.1;gbkey=mRNA;gene=LOC132344623;model_evidence=Supporting evidence includes similarity to: 1 mRNA%2C 15 Proteins%2C and 98%25 coverage of the annotated genomic feature by RNAseq alignments;product=melanoma antigen preferentially expressed in tumors;transcript_id=Cattle_Y_T01124;gene_id=Cattle_Y_G00721;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884282.1
haplotype2-0000357	CAT	exon	43936438	43937289	.	-	.	ID=Cattle_Y_E02090;Parent=Cattle_Y_T01124;Dbxref=GeneID:132344623,GenBank:XM_059884282.1;gbkey=mRNA;gene=LOC132344623;product=melanoma antigen preferentially expressed in tumors;transcript_id=Cattle_Y_T01124;gene_id=Cattle_Y_G00721;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884282.1-4
haplotype2-0000357	CAT	exon	43938502	43939107	.	-	.	ID=Cattle_Y_E02091;Parent=Cattle_Y_T01124;Dbxref=GeneID:132344623,GenBank:XM_059884282.1;gbkey=mRNA;gene=LOC132344623;product=melanoma antigen preferentially expressed in tumors;transcript_id=Cattle_Y_T01124;gene_id=Cattle_Y_G00721;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884282.1-3
haplotype2-0000357	CAT	exon	43939391	43939707	.	-	.	ID=Cattle_Y_E02092;Parent=Cattle_Y_T01124;Dbxref=GeneID:132344623,GenBank:XM_059884282.1;gbkey=mRNA;gene=LOC132344623;product=melanoma antigen preferentially expressed in tumors;transcript_id=Cattle_Y_T01124;gene_id=Cattle_Y_G00721;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884282.1-2
haplotype2-0000357	CAT	exon	43941021	43941821	.	-	.	ID=Cattle_Y_E02093;Parent=Cattle_Y_T01124;Dbxref=GeneID:132344623,GenBank:XM_059884282.1;gbkey=mRNA;gene=LOC132344623;product=melanoma antigen preferentially expressed in tumors;transcript_id=Cattle_Y_T01124;gene_id=Cattle_Y_G00721;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884282.1-1
haplotype2-0000357	CAT	CDS	43936713	43937289	.	-	1	ID=Cattle_Y_C01720;Parent=Cattle_Y_T01124;Dbxref=GeneID:132344623,GenBank:XP_059740265.1;Name=XP_059740265.1;gbkey=CDS;gene=LOC132344623;product=melanoma antigen preferentially expressed in tumors;protein_id=XP_059740265.1;gene_id=Cattle_Y_G00721;transcript_id=Cattle_Y_T01124;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43938502	43939107	.	-	1	ID=Cattle_Y_C01721;Parent=Cattle_Y_T01124;Dbxref=GeneID:132344623,GenBank:XP_059740265.1;Name=XP_059740265.1;gbkey=CDS;gene=LOC132344623;product=melanoma antigen preferentially expressed in tumors;protein_id=XP_059740265.1;gene_id=Cattle_Y_G00721;transcript_id=Cattle_Y_T01124;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43939391	43939707	.	-	0	ID=Cattle_Y_C01722;Parent=Cattle_Y_T01124;Dbxref=GeneID:132344623,GenBank:XP_059740265.1;Name=XP_059740265.1;gbkey=CDS;gene=LOC132344623;product=melanoma antigen preferentially expressed in tumors;protein_id=XP_059740265.1;gene_id=Cattle_Y_G00721;transcript_id=Cattle_Y_T01124;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	43941021	43941056	.	-	0	ID=Cattle_Y_C01723;Parent=Cattle_Y_T01124;Dbxref=GeneID:132344623,GenBank:XP_059740265.1;Name=XP_059740265.1;gbkey=CDS;gene=LOC132344623;product=melanoma antigen preferentially expressed in tumors;protein_id=XP_059740265.1;gene_id=Cattle_Y_G00721;transcript_id=Cattle_Y_T01124;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	43958497	43959821	.	-	.	ID=Cattle_Y_G00722;Dbxref=GeneID:132344622;Name=LOC132344622;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344622;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00722;source_id=gene-LOC132344622
haplotype2-0000357	CAT	exon	43958497	43959821	.	-	.	ID=Cattle_Y_T01125;Parent=Cattle_Y_G00722;Dbxref=GeneID:132344622;gbkey=exon;gene=LOC132344622;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 10%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00722;transcript_id=Cattle_Y_T01125;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344622
haplotype2-0000357	CAT	gene	44019652	44035650	.	+	.	ID=Cattle_Y_G00723;Dbxref=GeneID:132344620;Name=LOC132344620;description=ubiquitin-like modifier-activating enzyme 1;gbkey=Gene;gene=LOC132344620;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00723;source_id=gene-LOC132344620
haplotype2-0000357	CAT	exon	44019652	44019729	.	+	.	ID=Cattle_Y_T01126;Parent=Cattle_Y_G00723;Dbxref=GeneID:132344620;gbkey=exon;gene=LOC132344620;model_evidence=Supporting evidence includes similarity to: 28 Proteins, and 30%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00723;transcript_id=Cattle_Y_T01126;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344620-20
haplotype2-0000357	CAT	exon	44019835	44019967	.	+	.	ID=Cattle_Y_T01127;Parent=Cattle_Y_G00723;Dbxref=GeneID:132344620;gbkey=exon;gene=LOC132344620;model_evidence=Supporting evidence includes similarity to: 28 Proteins, and 30%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00723;transcript_id=Cattle_Y_T01127;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344620-19
haplotype2-0000357	CAT	exon	44022097	44022198	.	+	.	ID=Cattle_Y_T01128;Parent=Cattle_Y_G00723;Dbxref=GeneID:132344620;gbkey=exon;gene=LOC132344620;model_evidence=Supporting evidence includes similarity to: 28 Proteins, and 30%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00723;transcript_id=Cattle_Y_T01128;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344620-18
haplotype2-0000357	CAT	exon	44022298	44022440	.	+	.	ID=Cattle_Y_T01129;Parent=Cattle_Y_G00723;Dbxref=GeneID:132344620;gbkey=exon;gene=LOC132344620;model_evidence=Supporting evidence includes similarity to: 28 Proteins, and 30%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00723;transcript_id=Cattle_Y_T01129;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344620-17
haplotype2-0000357	CAT	exon	44022550	44022750	.	+	.	ID=Cattle_Y_T01130;Parent=Cattle_Y_G00723;Dbxref=GeneID:132344620;gbkey=exon;gene=LOC132344620;model_evidence=Supporting evidence includes similarity to: 28 Proteins, and 30%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00723;transcript_id=Cattle_Y_T01130;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344620-16
haplotype2-0000357	CAT	exon	44022867	44022997	.	+	.	ID=Cattle_Y_T01131;Parent=Cattle_Y_G00723;Dbxref=GeneID:132344620;gbkey=exon;gene=LOC132344620;model_evidence=Supporting evidence includes similarity to: 28 Proteins, and 30%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00723;transcript_id=Cattle_Y_T01131;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344620-15
haplotype2-0000357	CAT	exon	44023068	44023143	.	+	.	ID=Cattle_Y_T01132;Parent=Cattle_Y_G00723;Dbxref=GeneID:132344620;gbkey=exon;gene=LOC132344620;model_evidence=Supporting evidence includes similarity to: 28 Proteins, and 30%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00723;transcript_id=Cattle_Y_T01132;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344620-14
haplotype2-0000357	CAT	exon	44023479	44023657	.	+	.	ID=Cattle_Y_T01133;Parent=Cattle_Y_G00723;Dbxref=GeneID:132344620;gbkey=exon;gene=LOC132344620;model_evidence=Supporting evidence includes similarity to: 28 Proteins, and 30%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00723;transcript_id=Cattle_Y_T01133;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344620-13
haplotype2-0000357	CAT	exon	44024628	44024758	.	+	.	ID=Cattle_Y_T01134;Parent=Cattle_Y_G00723;Dbxref=GeneID:132344620;gbkey=exon;gene=LOC132344620;model_evidence=Supporting evidence includes similarity to: 28 Proteins, and 30%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00723;transcript_id=Cattle_Y_T01134;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344620-12
haplotype2-0000357	CAT	exon	44024878	44025045	.	+	.	ID=Cattle_Y_T01135;Parent=Cattle_Y_G00723;Dbxref=GeneID:132344620;gbkey=exon;gene=LOC132344620;model_evidence=Supporting evidence includes similarity to: 28 Proteins, and 30%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00723;transcript_id=Cattle_Y_T01135;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344620-11
haplotype2-0000357	CAT	exon	44026807	44026871	.	+	.	ID=Cattle_Y_T01136;Parent=Cattle_Y_G00723;Dbxref=GeneID:132344620;gbkey=exon;gene=LOC132344620;model_evidence=Supporting evidence includes similarity to: 28 Proteins, and 30%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00723;transcript_id=Cattle_Y_T01136;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344620-10
haplotype2-0000357	CAT	exon	44027235	44027430	.	+	.	ID=Cattle_Y_T01137;Parent=Cattle_Y_G00723;Dbxref=GeneID:132344620;gbkey=exon;gene=LOC132344620;model_evidence=Supporting evidence includes similarity to: 28 Proteins, and 30%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00723;transcript_id=Cattle_Y_T01137;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344620-9
haplotype2-0000357	CAT	exon	44028939	44029013	.	+	.	ID=Cattle_Y_T01138;Parent=Cattle_Y_G00723;Dbxref=GeneID:132344620;gbkey=exon;gene=LOC132344620;model_evidence=Supporting evidence includes similarity to: 28 Proteins, and 30%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00723;transcript_id=Cattle_Y_T01138;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344620-8
haplotype2-0000357	CAT	exon	44029137	44029323	.	+	.	ID=Cattle_Y_T01139;Parent=Cattle_Y_G00723;Dbxref=GeneID:132344620;gbkey=exon;gene=LOC132344620;model_evidence=Supporting evidence includes similarity to: 28 Proteins, and 30%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00723;transcript_id=Cattle_Y_T01139;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344620-7
haplotype2-0000357	CAT	exon	44033996	44034084	.	+	.	ID=Cattle_Y_T01140;Parent=Cattle_Y_G00723;Dbxref=GeneID:132344620;gbkey=exon;gene=LOC132344620;model_evidence=Supporting evidence includes similarity to: 28 Proteins, and 30%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00723;transcript_id=Cattle_Y_T01140;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344620-6
haplotype2-0000357	CAT	exon	44034313	44034405	.	+	.	ID=Cattle_Y_T01141;Parent=Cattle_Y_G00723;Dbxref=GeneID:132344620;gbkey=exon;gene=LOC132344620;model_evidence=Supporting evidence includes similarity to: 28 Proteins, and 30%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00723;transcript_id=Cattle_Y_T01141;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344620-5
haplotype2-0000357	CAT	exon	44034529	44034720	.	+	.	ID=Cattle_Y_T01142;Parent=Cattle_Y_G00723;Dbxref=GeneID:132344620;gbkey=exon;gene=LOC132344620;model_evidence=Supporting evidence includes similarity to: 28 Proteins, and 30%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00723;transcript_id=Cattle_Y_T01142;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344620-4
haplotype2-0000357	CAT	exon	44034984	44035084	.	+	.	ID=Cattle_Y_T01143;Parent=Cattle_Y_G00723;Dbxref=GeneID:132344620;gbkey=exon;gene=LOC132344620;model_evidence=Supporting evidence includes similarity to: 28 Proteins, and 30%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00723;transcript_id=Cattle_Y_T01143;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344620-3
haplotype2-0000357	CAT	exon	44035189	44035290	.	+	.	ID=Cattle_Y_T01144;Parent=Cattle_Y_G00723;Dbxref=GeneID:132344620;gbkey=exon;gene=LOC132344620;model_evidence=Supporting evidence includes similarity to: 28 Proteins, and 30%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00723;transcript_id=Cattle_Y_T01144;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344620-2
haplotype2-0000357	CAT	exon	44035437	44035650	.	+	.	ID=Cattle_Y_T01145;Parent=Cattle_Y_G00723;Dbxref=GeneID:132344620;gbkey=exon;gene=LOC132344620;model_evidence=Supporting evidence includes similarity to: 28 Proteins, and 30%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00723;transcript_id=Cattle_Y_T01145;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344620
haplotype2-0000357	CAT	gene	45864728	45870121	.	-	.	ID=Cattle_Y_G00724;Dbxref=GeneID:132344621;Name=LOC132344621;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC132344621;gene_biotype=protein_coding;gene_id=Cattle_Y_G00724;source_id=gene-LOC132344621
haplotype2-0000357	CAT	mRNA	45864728	45870121	.	-	.	ID=Cattle_Y_T01146;Parent=Cattle_Y_G00724;Dbxref=GeneID:132344621,GenBank:XM_059884281.1;Name=XM_059884281.1;gbkey=mRNA;gene=LOC132344621;model_evidence=Supporting evidence includes similarity to: 17 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01146;gene_id=Cattle_Y_G00724;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884281.1
haplotype2-0000357	CAT	exon	45864728	45865584	.	-	.	ID=Cattle_Y_E02094;Parent=Cattle_Y_T01146;Dbxref=GeneID:132344621,GenBank:XM_059884281.1;gbkey=mRNA;gene=LOC132344621;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01146;gene_id=Cattle_Y_G00724;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884281.1-4
haplotype2-0000357	CAT	exon	45866797	45867402	.	-	.	ID=Cattle_Y_E02095;Parent=Cattle_Y_T01146;Dbxref=GeneID:132344621,GenBank:XM_059884281.1;gbkey=mRNA;gene=LOC132344621;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01146;gene_id=Cattle_Y_G00724;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884281.1-3
haplotype2-0000357	CAT	exon	45867686	45868002	.	-	.	ID=Cattle_Y_E02096;Parent=Cattle_Y_T01146;Dbxref=GeneID:132344621,GenBank:XM_059884281.1;gbkey=mRNA;gene=LOC132344621;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01146;gene_id=Cattle_Y_G00724;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884281.1-2
haplotype2-0000357	CAT	exon	45869309	45870121	.	-	.	ID=Cattle_Y_E02097;Parent=Cattle_Y_T01146;Dbxref=GeneID:132344621,GenBank:XM_059884281.1;gbkey=mRNA;gene=LOC132344621;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01146;gene_id=Cattle_Y_G00724;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884281.1-1
haplotype2-0000357	CAT	CDS	45865008	45865584	.	-	1	ID=Cattle_Y_C01724;Parent=Cattle_Y_T01146;Dbxref=GeneID:132344621,GenBank:XP_059740264.1;Name=XP_059740264.1;gbkey=CDS;gene=LOC132344621;product=melanoma antigen preferentially expressed in tumors-like;protein_id=XP_059740264.1;gene_id=Cattle_Y_G00724;transcript_id=Cattle_Y_T01146;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	45866797	45867402	.	-	1	ID=Cattle_Y_C01725;Parent=Cattle_Y_T01146;Dbxref=GeneID:132344621,GenBank:XP_059740264.1;Name=XP_059740264.1;gbkey=CDS;gene=LOC132344621;product=melanoma antigen preferentially expressed in tumors-like;protein_id=XP_059740264.1;gene_id=Cattle_Y_G00724;transcript_id=Cattle_Y_T01146;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	45867686	45868002	.	-	0	ID=Cattle_Y_C01726;Parent=Cattle_Y_T01146;Dbxref=GeneID:132344621,GenBank:XP_059740264.1;Name=XP_059740264.1;gbkey=CDS;gene=LOC132344621;product=melanoma antigen preferentially expressed in tumors-like;protein_id=XP_059740264.1;gene_id=Cattle_Y_G00724;transcript_id=Cattle_Y_T01146;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	45869309	45869344	.	-	0	ID=Cattle_Y_C01727;Parent=Cattle_Y_T01146;Dbxref=GeneID:132344621,GenBank:XP_059740264.1;Name=XP_059740264.1;gbkey=CDS;gene=LOC132344621;product=melanoma antigen preferentially expressed in tumors-like;protein_id=XP_059740264.1;gene_id=Cattle_Y_G00724;transcript_id=Cattle_Y_T01146;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	45886768	45888092	.	-	.	ID=Cattle_Y_G00725;Dbxref=GeneID:132344622;Name=LOC132344622;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344622;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00725;source_id=gene-LOC132344622
haplotype2-0000357	CAT	exon	45886768	45888092	.	-	.	ID=Cattle_Y_T01147;Parent=Cattle_Y_G00725;Dbxref=GeneID:132344622;gbkey=exon;gene=LOC132344622;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 10%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00725;transcript_id=Cattle_Y_T01147;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344622
haplotype2-0000357	CAT	gene	45947118	45963158	.	+	.	ID=Cattle_Y_G00726;Dbxref=GeneID:132344619;Name=LOC132344619;description=ubiquitin-like modifier-activating enzyme 1;gbkey=Gene;gene=LOC132344619;gene_biotype=transcribed_pseudogene;pseudo=true;gene_id=Cattle_Y_G00726;source_id=gene-LOC132344619
haplotype2-0000357	CAT	transcript	45947118	45963158	.	+	.	ID=Cattle_Y_T01148;Parent=Cattle_Y_G00726;Dbxref=GeneID:132344619,GenBank:XR_009493659.1;Name=XR_009493659.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=misc_RNA;gene=LOC132344619;model_evidence=Supporting evidence includes similarity to: 1 mRNA%2C 26 Proteins%2C and 29%25 coverage of the annotated genomic feature by RNAseq alignments;product=ubiquitin-like modifier-activating enzyme 1;pseudo=true;transcript_id=Cattle_Y_T01148;gene_id=Cattle_Y_G00726;gene_biotype=transcribed_pseudogene;transcript_biotype=transcribed_pseudogene;source_id=rna-XR_009493659.1
haplotype2-0000357	CAT	exon	45947118	45947195	.	+	.	ID=Cattle_Y_E02098;Parent=Cattle_Y_T01148;Dbxref=GeneID:132344619,GenBank:XR_009493659.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=misc_RNA;gene=LOC132344619;product=ubiquitin-like modifier-activating enzyme 1;pseudo=true;transcript_id=Cattle_Y_T01148;gene_id=Cattle_Y_G00726;gene_biotype=transcribed_pseudogene;transcript_biotype=transcribed_pseudogene;source_id=exon-XR_009493659.1-1
haplotype2-0000357	CAT	exon	45947301	45947433	.	+	.	ID=Cattle_Y_E02099;Parent=Cattle_Y_T01148;Dbxref=GeneID:132344619,GenBank:XR_009493659.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=misc_RNA;gene=LOC132344619;product=ubiquitin-like modifier-activating enzyme 1;pseudo=true;transcript_id=Cattle_Y_T01148;gene_id=Cattle_Y_G00726;gene_biotype=transcribed_pseudogene;transcript_biotype=transcribed_pseudogene;source_id=exon-XR_009493659.1-2
haplotype2-0000357	CAT	exon	45949561	45949662	.	+	.	ID=Cattle_Y_E02100;Parent=Cattle_Y_T01148;Dbxref=GeneID:132344619,GenBank:XR_009493659.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=misc_RNA;gene=LOC132344619;product=ubiquitin-like modifier-activating enzyme 1;pseudo=true;transcript_id=Cattle_Y_T01148;gene_id=Cattle_Y_G00726;gene_biotype=transcribed_pseudogene;transcript_biotype=transcribed_pseudogene;source_id=exon-XR_009493659.1-3
haplotype2-0000357	CAT	exon	45949762	45949904	.	+	.	ID=Cattle_Y_E02101;Parent=Cattle_Y_T01148;Dbxref=GeneID:132344619,GenBank:XR_009493659.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=misc_RNA;gene=LOC132344619;product=ubiquitin-like modifier-activating enzyme 1;pseudo=true;transcript_id=Cattle_Y_T01148;gene_id=Cattle_Y_G00726;gene_biotype=transcribed_pseudogene;transcript_biotype=transcribed_pseudogene;source_id=exon-XR_009493659.1-4
haplotype2-0000357	CAT	exon	45950014	45950214	.	+	.	ID=Cattle_Y_E02102;Parent=Cattle_Y_T01148;Dbxref=GeneID:132344619,GenBank:XR_009493659.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=misc_RNA;gene=LOC132344619;product=ubiquitin-like modifier-activating enzyme 1;pseudo=true;transcript_id=Cattle_Y_T01148;gene_id=Cattle_Y_G00726;gene_biotype=transcribed_pseudogene;transcript_biotype=transcribed_pseudogene;source_id=exon-XR_009493659.1-5
haplotype2-0000357	CAT	exon	45950331	45950461	.	+	.	ID=Cattle_Y_E02103;Parent=Cattle_Y_T01148;Dbxref=GeneID:132344619,GenBank:XR_009493659.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=misc_RNA;gene=LOC132344619;product=ubiquitin-like modifier-activating enzyme 1;pseudo=true;transcript_id=Cattle_Y_T01148;gene_id=Cattle_Y_G00726;gene_biotype=transcribed_pseudogene;transcript_biotype=transcribed_pseudogene;source_id=exon-XR_009493659.1-6
haplotype2-0000357	CAT	exon	45950532	45950607	.	+	.	ID=Cattle_Y_E02104;Parent=Cattle_Y_T01148;Dbxref=GeneID:132344619,GenBank:XR_009493659.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=misc_RNA;gene=LOC132344619;product=ubiquitin-like modifier-activating enzyme 1;pseudo=true;transcript_id=Cattle_Y_T01148;gene_id=Cattle_Y_G00726;gene_biotype=transcribed_pseudogene;transcript_biotype=transcribed_pseudogene;source_id=exon-XR_009493659.1-7
haplotype2-0000357	CAT	exon	45950943	45951121	.	+	.	ID=Cattle_Y_E02105;Parent=Cattle_Y_T01148;Dbxref=GeneID:132344619,GenBank:XR_009493659.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=misc_RNA;gene=LOC132344619;product=ubiquitin-like modifier-activating enzyme 1;pseudo=true;transcript_id=Cattle_Y_T01148;gene_id=Cattle_Y_G00726;gene_biotype=transcribed_pseudogene;transcript_biotype=transcribed_pseudogene;source_id=exon-XR_009493659.1-8
haplotype2-0000357	CAT	exon	45952092	45952222	.	+	.	ID=Cattle_Y_E02106;Parent=Cattle_Y_T01148;Dbxref=GeneID:132344619,GenBank:XR_009493659.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=misc_RNA;gene=LOC132344619;product=ubiquitin-like modifier-activating enzyme 1;pseudo=true;transcript_id=Cattle_Y_T01148;gene_id=Cattle_Y_G00726;gene_biotype=transcribed_pseudogene;transcript_biotype=transcribed_pseudogene;source_id=exon-XR_009493659.1-9
haplotype2-0000357	CAT	exon	45952342	45952509	.	+	.	ID=Cattle_Y_E02107;Parent=Cattle_Y_T01148;Dbxref=GeneID:132344619,GenBank:XR_009493659.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=misc_RNA;gene=LOC132344619;product=ubiquitin-like modifier-activating enzyme 1;pseudo=true;transcript_id=Cattle_Y_T01148;gene_id=Cattle_Y_G00726;gene_biotype=transcribed_pseudogene;transcript_biotype=transcribed_pseudogene;source_id=exon-XR_009493659.1-10
haplotype2-0000357	CAT	exon	45954269	45954333	.	+	.	ID=Cattle_Y_E02108;Parent=Cattle_Y_T01148;Dbxref=GeneID:132344619,GenBank:XR_009493659.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=misc_RNA;gene=LOC132344619;product=ubiquitin-like modifier-activating enzyme 1;pseudo=true;transcript_id=Cattle_Y_T01148;gene_id=Cattle_Y_G00726;gene_biotype=transcribed_pseudogene;transcript_biotype=transcribed_pseudogene;source_id=exon-XR_009493659.1-11
haplotype2-0000357	CAT	exon	45954697	45954892	.	+	.	ID=Cattle_Y_E02109;Parent=Cattle_Y_T01148;Dbxref=GeneID:132344619,GenBank:XR_009493659.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=misc_RNA;gene=LOC132344619;product=ubiquitin-like modifier-activating enzyme 1;pseudo=true;transcript_id=Cattle_Y_T01148;gene_id=Cattle_Y_G00726;gene_biotype=transcribed_pseudogene;transcript_biotype=transcribed_pseudogene;source_id=exon-XR_009493659.1-12
haplotype2-0000357	CAT	exon	45956401	45956475	.	+	.	ID=Cattle_Y_E02110;Parent=Cattle_Y_T01148;Dbxref=GeneID:132344619,GenBank:XR_009493659.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=misc_RNA;gene=LOC132344619;product=ubiquitin-like modifier-activating enzyme 1;pseudo=true;transcript_id=Cattle_Y_T01148;gene_id=Cattle_Y_G00726;gene_biotype=transcribed_pseudogene;transcript_biotype=transcribed_pseudogene;source_id=exon-XR_009493659.1-13
haplotype2-0000357	CAT	exon	45956599	45956785	.	+	.	ID=Cattle_Y_E02111;Parent=Cattle_Y_T01148;Dbxref=GeneID:132344619,GenBank:XR_009493659.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=misc_RNA;gene=LOC132344619;product=ubiquitin-like modifier-activating enzyme 1;pseudo=true;transcript_id=Cattle_Y_T01148;gene_id=Cattle_Y_G00726;gene_biotype=transcribed_pseudogene;transcript_biotype=transcribed_pseudogene;source_id=exon-XR_009493659.1-14
haplotype2-0000357	CAT	exon	45961441	45961529	.	+	.	ID=Cattle_Y_E02112;Parent=Cattle_Y_T01148;Dbxref=GeneID:132344619,GenBank:XR_009493659.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=misc_RNA;gene=LOC132344619;product=ubiquitin-like modifier-activating enzyme 1;pseudo=true;transcript_id=Cattle_Y_T01148;gene_id=Cattle_Y_G00726;gene_biotype=transcribed_pseudogene;transcript_biotype=transcribed_pseudogene;source_id=exon-XR_009493659.1-15
haplotype2-0000357	CAT	exon	45961758	45961850	.	+	.	ID=Cattle_Y_E02113;Parent=Cattle_Y_T01148;Dbxref=GeneID:132344619,GenBank:XR_009493659.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=misc_RNA;gene=LOC132344619;product=ubiquitin-like modifier-activating enzyme 1;pseudo=true;transcript_id=Cattle_Y_T01148;gene_id=Cattle_Y_G00726;gene_biotype=transcribed_pseudogene;transcript_biotype=transcribed_pseudogene;source_id=exon-XR_009493659.1-16
haplotype2-0000357	CAT	exon	45961974	45962165	.	+	.	ID=Cattle_Y_E02114;Parent=Cattle_Y_T01148;Dbxref=GeneID:132344619,GenBank:XR_009493659.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=misc_RNA;gene=LOC132344619;product=ubiquitin-like modifier-activating enzyme 1;pseudo=true;transcript_id=Cattle_Y_T01148;gene_id=Cattle_Y_G00726;gene_biotype=transcribed_pseudogene;transcript_biotype=transcribed_pseudogene;source_id=exon-XR_009493659.1-17
haplotype2-0000357	CAT	exon	45962429	45962529	.	+	.	ID=Cattle_Y_E02115;Parent=Cattle_Y_T01148;Dbxref=GeneID:132344619,GenBank:XR_009493659.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=misc_RNA;gene=LOC132344619;product=ubiquitin-like modifier-activating enzyme 1;pseudo=true;transcript_id=Cattle_Y_T01148;gene_id=Cattle_Y_G00726;gene_biotype=transcribed_pseudogene;transcript_biotype=transcribed_pseudogene;source_id=exon-XR_009493659.1-18
haplotype2-0000357	CAT	exon	45962634	45962735	.	+	.	ID=Cattle_Y_E02116;Parent=Cattle_Y_T01148;Dbxref=GeneID:132344619,GenBank:XR_009493659.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=misc_RNA;gene=LOC132344619;product=ubiquitin-like modifier-activating enzyme 1;pseudo=true;transcript_id=Cattle_Y_T01148;gene_id=Cattle_Y_G00726;gene_biotype=transcribed_pseudogene;transcript_biotype=transcribed_pseudogene;source_id=exon-XR_009493659.1-19
haplotype2-0000357	CAT	exon	45962882	45963158	.	+	.	ID=Cattle_Y_E02117;Parent=Cattle_Y_T01148;Dbxref=GeneID:132344619,GenBank:XR_009493659.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=misc_RNA;gene=LOC132344619;product=ubiquitin-like modifier-activating enzyme 1;pseudo=true;transcript_id=Cattle_Y_T01148;gene_id=Cattle_Y_G00726;gene_biotype=transcribed_pseudogene;transcript_biotype=transcribed_pseudogene;source_id=exon-XR_009493659.1-20
haplotype2-0000357	CAT	gene	46391820	46397216	.	-	.	ID=Cattle_Y_G00727;Dbxref=GeneID:132344469;Name=LOC132344469;description=melanoma antigen preferentially expressed in tumors-like;gbkey=Gene;gene=LOC132344469;gene_biotype=protein_coding;gene_id=Cattle_Y_G00727;source_id=gene-LOC132344469
haplotype2-0000357	CAT	mRNA	46391820	46397216	.	-	.	ID=Cattle_Y_T01149;Parent=Cattle_Y_G00727;Dbxref=GeneID:132344469,GenBank:XM_059884065.1;Name=XM_059884065.1;gbkey=mRNA;gene=LOC132344469;model_evidence=Supporting evidence includes similarity to: 34 Proteins%2C and 97%25 coverage of the annotated genomic feature by RNAseq alignments;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01149;gene_id=Cattle_Y_G00727;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884065.1
haplotype2-0000357	CAT	exon	46391820	46392676	.	-	.	ID=Cattle_Y_E02118;Parent=Cattle_Y_T01149;Dbxref=GeneID:132344469,GenBank:XM_059884065.1;gbkey=mRNA;gene=LOC132344469;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01149;gene_id=Cattle_Y_G00727;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884065.1-4
haplotype2-0000357	CAT	exon	46393889	46394494	.	-	.	ID=Cattle_Y_E02119;Parent=Cattle_Y_T01149;Dbxref=GeneID:132344469,GenBank:XM_059884065.1;gbkey=mRNA;gene=LOC132344469;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01149;gene_id=Cattle_Y_G00727;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884065.1-4
haplotype2-0000357	CAT	exon	46394778	46395094	.	-	.	ID=Cattle_Y_E02120;Parent=Cattle_Y_T01149;Dbxref=GeneID:132344469,GenBank:XM_059884065.1;gbkey=mRNA;gene=LOC132344469;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01149;gene_id=Cattle_Y_G00727;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884065.1-4
haplotype2-0000357	CAT	exon	46396404	46397216	.	-	.	ID=Cattle_Y_E02121;Parent=Cattle_Y_T01149;Dbxref=GeneID:132344469,GenBank:XM_059884065.1;gbkey=mRNA;gene=LOC132344469;product=melanoma antigen preferentially expressed in tumors-like;transcript_id=Cattle_Y_T01149;gene_id=Cattle_Y_G00727;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884065.1-1
haplotype2-0000357	CAT	CDS	46392100	46392676	.	-	1	ID=Cattle_Y_C01728;Parent=Cattle_Y_T01149;gene_id=Cattle_Y_G00727;transcript_id=Cattle_Y_T01149;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	46393889	46394494	.	-	1	ID=Cattle_Y_C01729;Parent=Cattle_Y_T01149;gene_id=Cattle_Y_G00727;transcript_id=Cattle_Y_T01149;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	46394778	46395094	.	-	0	ID=Cattle_Y_C01730;Parent=Cattle_Y_T01149;gene_id=Cattle_Y_G00727;transcript_id=Cattle_Y_T01149;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	46396404	46396439	.	-	0	ID=Cattle_Y_C01731;Parent=Cattle_Y_T01149;gene_id=Cattle_Y_G00727;transcript_id=Cattle_Y_T01149;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	46413868	46415192	.	-	.	ID=Cattle_Y_G00728;Dbxref=GeneID:132344622;Name=LOC132344622;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344622;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00728;source_id=gene-LOC132344622
haplotype2-0000357	CAT	exon	46413868	46415192	.	-	.	ID=Cattle_Y_T01150;Parent=Cattle_Y_G00728;Dbxref=GeneID:132344622;gbkey=exon;gene=LOC132344622;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 10%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00728;transcript_id=Cattle_Y_T01150;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344622
haplotype2-0000357	CAT	gene	46472598	46490118	.	+	.	ID=Cattle_Y_G00729;Dbxref=GeneID:132344429;Name=LOC132344429;description=ubiquitin-like modifier-activating enzyme 1;gbkey=Gene;gene=LOC132344429;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00729;source_id=gene-LOC132344429
haplotype2-0000357	CAT	exon	46472598	46472603	.	+	.	ID=Cattle_Y_T01151;Parent=Cattle_Y_G00729;Dbxref=GeneID:132344429;gbkey=exon;gene=LOC132344429;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 23%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00729;transcript_id=Cattle_Y_T01151;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344429-25
haplotype2-0000357	CAT	exon	46472696	46472754	.	+	.	ID=Cattle_Y_T01152;Parent=Cattle_Y_G00729;Dbxref=GeneID:132344429;gbkey=exon;gene=LOC132344429;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 23%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00729;transcript_id=Cattle_Y_T01152;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344429-24
haplotype2-0000357	CAT	exon	46472857	46473025	.	+	.	ID=Cattle_Y_T01153;Parent=Cattle_Y_G00729;Dbxref=GeneID:132344429;gbkey=exon;gene=LOC132344429;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 23%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00729;transcript_id=Cattle_Y_T01153;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344429-23
haplotype2-0000357	CAT	exon	46473116	46473250	.	+	.	ID=Cattle_Y_T01154;Parent=Cattle_Y_G00729;Dbxref=GeneID:132344429;gbkey=exon;gene=LOC132344429;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 23%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00729;transcript_id=Cattle_Y_T01154;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344429-22
haplotype2-0000357	CAT	exon	46473869	46473975	.	+	.	ID=Cattle_Y_T01155;Parent=Cattle_Y_G00729;Dbxref=GeneID:132344429;gbkey=exon;gene=LOC132344429;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 23%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00729;transcript_id=Cattle_Y_T01155;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344429-21
haplotype2-0000357	CAT	exon	46474185	46474275	.	+	.	ID=Cattle_Y_T01156;Parent=Cattle_Y_G00729;Dbxref=GeneID:132344429;gbkey=exon;gene=LOC132344429;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 23%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00729;transcript_id=Cattle_Y_T01156;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344429-20
haplotype2-0000357	CAT	exon	46474381	46474513	.	+	.	ID=Cattle_Y_T01157;Parent=Cattle_Y_G00729;Dbxref=GeneID:132344429;gbkey=exon;gene=LOC132344429;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 23%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00729;transcript_id=Cattle_Y_T01157;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344429-19
haplotype2-0000357	CAT	exon	46476645	46476746	.	+	.	ID=Cattle_Y_T01158;Parent=Cattle_Y_G00729;Dbxref=GeneID:132344429;gbkey=exon;gene=LOC132344429;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 23%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00729;transcript_id=Cattle_Y_T01158;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344429-18
haplotype2-0000357	CAT	exon	46476846	46476988	.	+	.	ID=Cattle_Y_T01159;Parent=Cattle_Y_G00729;Dbxref=GeneID:132344429;gbkey=exon;gene=LOC132344429;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 23%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00729;transcript_id=Cattle_Y_T01159;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344429-17
haplotype2-0000357	CAT	exon	46477098	46477298	.	+	.	ID=Cattle_Y_T01160;Parent=Cattle_Y_G00729;Dbxref=GeneID:132344429;gbkey=exon;gene=LOC132344429;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 23%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00729;transcript_id=Cattle_Y_T01160;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344429-16
haplotype2-0000357	CAT	exon	46477415	46477545	.	+	.	ID=Cattle_Y_T01161;Parent=Cattle_Y_G00729;Dbxref=GeneID:132344429;gbkey=exon;gene=LOC132344429;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 23%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00729;transcript_id=Cattle_Y_T01161;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344429-15
haplotype2-0000357	CAT	exon	46477616	46477691	.	+	.	ID=Cattle_Y_T01162;Parent=Cattle_Y_G00729;Dbxref=GeneID:132344429;gbkey=exon;gene=LOC132344429;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 23%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00729;transcript_id=Cattle_Y_T01162;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344429-14
haplotype2-0000357	CAT	exon	46478027	46478205	.	+	.	ID=Cattle_Y_T01163;Parent=Cattle_Y_G00729;Dbxref=GeneID:132344429;gbkey=exon;gene=LOC132344429;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 23%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00729;transcript_id=Cattle_Y_T01163;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344429-13
haplotype2-0000357	CAT	exon	46479176	46479306	.	+	.	ID=Cattle_Y_T01164;Parent=Cattle_Y_G00729;Dbxref=GeneID:132344429;gbkey=exon;gene=LOC132344429;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 23%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00729;transcript_id=Cattle_Y_T01164;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344429-12
haplotype2-0000357	CAT	exon	46479426	46479593	.	+	.	ID=Cattle_Y_T01165;Parent=Cattle_Y_G00729;Dbxref=GeneID:132344429;gbkey=exon;gene=LOC132344429;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 23%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00729;transcript_id=Cattle_Y_T01165;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344429-11
haplotype2-0000357	CAT	exon	46481353	46481417	.	+	.	ID=Cattle_Y_T01166;Parent=Cattle_Y_G00729;Dbxref=GeneID:132344429;gbkey=exon;gene=LOC132344429;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 23%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00729;transcript_id=Cattle_Y_T01166;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344429-10
haplotype2-0000357	CAT	exon	46481781	46481976	.	+	.	ID=Cattle_Y_T01167;Parent=Cattle_Y_G00729;Dbxref=GeneID:132344429;gbkey=exon;gene=LOC132344429;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 23%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00729;transcript_id=Cattle_Y_T01167;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344429-9
haplotype2-0000357	CAT	exon	46483485	46483559	.	+	.	ID=Cattle_Y_T01168;Parent=Cattle_Y_G00729;Dbxref=GeneID:132344429;gbkey=exon;gene=LOC132344429;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 23%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00729;transcript_id=Cattle_Y_T01168;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344429-8
haplotype2-0000357	CAT	exon	46483683	46483869	.	+	.	ID=Cattle_Y_T01169;Parent=Cattle_Y_G00729;Dbxref=GeneID:132344429;gbkey=exon;gene=LOC132344429;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 23%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00729;transcript_id=Cattle_Y_T01169;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344429-7
haplotype2-0000357	CAT	exon	46488542	46488630	.	+	.	ID=Cattle_Y_T01170;Parent=Cattle_Y_G00729;Dbxref=GeneID:132344429;gbkey=exon;gene=LOC132344429;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 23%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00729;transcript_id=Cattle_Y_T01170;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344429-6
haplotype2-0000357	CAT	exon	46488859	46488951	.	+	.	ID=Cattle_Y_T01171;Parent=Cattle_Y_G00729;Dbxref=GeneID:132344429;gbkey=exon;gene=LOC132344429;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 23%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00729;transcript_id=Cattle_Y_T01171;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344429-5
haplotype2-0000357	CAT	exon	46489075	46489266	.	+	.	ID=Cattle_Y_T01172;Parent=Cattle_Y_G00729;Dbxref=GeneID:132344429;gbkey=exon;gene=LOC132344429;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 23%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00729;transcript_id=Cattle_Y_T01172;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344429-4
haplotype2-0000357	CAT	exon	46489530	46489631	.	+	.	ID=Cattle_Y_T01173;Parent=Cattle_Y_G00729;Dbxref=GeneID:132344429;gbkey=exon;gene=LOC132344429;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 23%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00729;transcript_id=Cattle_Y_T01173;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344429-3
haplotype2-0000357	CAT	exon	46489742	46489836	.	+	.	ID=Cattle_Y_T01174;Parent=Cattle_Y_G00729;Dbxref=GeneID:132344429;gbkey=exon;gene=LOC132344429;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 23%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00729;transcript_id=Cattle_Y_T01174;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344429-2
haplotype2-0000357	CAT	exon	46489983	46490118	.	+	.	ID=Cattle_Y_T01175;Parent=Cattle_Y_G00729;Dbxref=GeneID:132344429;gbkey=exon;gene=LOC132344429;model_evidence=Supporting evidence includes similarity to: 2 Proteins, and 23%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00729;transcript_id=Cattle_Y_T01175;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344429
haplotype2-0000357	CAT	gene	47108586	47142716	.	+	.	ID=Cattle_Y_G00730;Dbxref=GeneID:132344428;Name=LOC132344428;description=eukaryotic translation initiation factor 1A%2C X-chromosomal-like;gbkey=Gene;gene=LOC132344428;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00730;source_id=gene-LOC132344428
haplotype2-0000357	CAT	exon	47108586	47108599	.	+	.	ID=Cattle_Y_T01176;Parent=Cattle_Y_G00730;Dbxref=GeneID:132344428;gbkey=exon;gene=LOC132344428;model_evidence=Supporting evidence includes similarity to: 5 Proteins;pseudo=true;gene_id=Cattle_Y_G00730;transcript_id=Cattle_Y_T01176;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344428-7
haplotype2-0000357	CAT	exon	47110589	47110671	.	+	.	ID=Cattle_Y_T01177;Parent=Cattle_Y_G00730;Dbxref=GeneID:132344428;gbkey=exon;gene=LOC132344428;model_evidence=Supporting evidence includes similarity to: 5 Proteins;pseudo=true;gene_id=Cattle_Y_G00730;transcript_id=Cattle_Y_T01177;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344428-6
haplotype2-0000357	CAT	exon	47117288	47117386	.	+	.	ID=Cattle_Y_T01178;Parent=Cattle_Y_G00730;Dbxref=GeneID:132344428;gbkey=exon;gene=LOC132344428;model_evidence=Supporting evidence includes similarity to: 5 Proteins;pseudo=true;gene_id=Cattle_Y_G00730;transcript_id=Cattle_Y_T01178;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344428-5
haplotype2-0000357	CAT	exon	47120004	47120054	.	+	.	ID=Cattle_Y_T01179;Parent=Cattle_Y_G00730;Dbxref=GeneID:132344428;gbkey=exon;gene=LOC132344428;model_evidence=Supporting evidence includes similarity to: 5 Proteins;pseudo=true;gene_id=Cattle_Y_G00730;transcript_id=Cattle_Y_T01179;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344428-4
haplotype2-0000357	CAT	exon	47124967	47125048	.	+	.	ID=Cattle_Y_T01180;Parent=Cattle_Y_G00730;Dbxref=GeneID:132344428;gbkey=exon;gene=LOC132344428;model_evidence=Supporting evidence includes similarity to: 5 Proteins;pseudo=true;gene_id=Cattle_Y_G00730;transcript_id=Cattle_Y_T01180;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344428-3
haplotype2-0000357	CAT	exon	47127607	47127712	.	+	.	ID=Cattle_Y_T01181;Parent=Cattle_Y_G00730;Dbxref=GeneID:132344428;gbkey=exon;gene=LOC132344428;model_evidence=Supporting evidence includes similarity to: 5 Proteins;pseudo=true;gene_id=Cattle_Y_G00730;transcript_id=Cattle_Y_T01181;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344428-2
haplotype2-0000357	CAT	exon	47142443	47142716	.	+	.	ID=Cattle_Y_T01182;Parent=Cattle_Y_G00730;Dbxref=GeneID:132344428;gbkey=exon;gene=LOC132344428;model_evidence=Supporting evidence includes similarity to: 5 Proteins;pseudo=true;gene_id=Cattle_Y_G00730;transcript_id=Cattle_Y_T01182;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344428
haplotype2-0000357	CAT	gene	47158306	47216504	.	+	.	ID=Cattle_Y_G00731;Dbxref=GeneID:132344427;Name=LOC132344427;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344427;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00731;source_id=gene-LOC132344427
haplotype2-0000357	CAT	exon	47158306	47159914	.	+	.	ID=Cattle_Y_T01183;Parent=Cattle_Y_G00731;Dbxref=GeneID:132344427;gbkey=exon;gene=LOC132344427;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 13%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00731;transcript_id=Cattle_Y_T01183;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344427-9
haplotype2-0000357	CAT	exon	47211749	47211885	.	+	.	ID=Cattle_Y_T01184;Parent=Cattle_Y_G00731;Dbxref=GeneID:132344427;gbkey=exon;gene=LOC132344427;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 13%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00731;transcript_id=Cattle_Y_T01184;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344427-8
haplotype2-0000357	CAT	exon	47211938	47211951	.	+	.	ID=Cattle_Y_T01185;Parent=Cattle_Y_G00731;Dbxref=GeneID:132344427;gbkey=exon;gene=LOC132344427;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 13%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00731;transcript_id=Cattle_Y_T01185;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344427-7
haplotype2-0000357	CAT	exon	47212004	47212233	.	+	.	ID=Cattle_Y_T01186;Parent=Cattle_Y_G00731;Dbxref=GeneID:132344427;gbkey=exon;gene=LOC132344427;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 13%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00731;transcript_id=Cattle_Y_T01186;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344427-6
haplotype2-0000357	CAT	exon	47213553	47213750	.	+	.	ID=Cattle_Y_T01187;Parent=Cattle_Y_G00731;Dbxref=GeneID:132344427;gbkey=exon;gene=LOC132344427;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 13%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00731;transcript_id=Cattle_Y_T01187;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344427-5
haplotype2-0000357	CAT	exon	47214335	47214619	.	+	.	ID=Cattle_Y_T01188;Parent=Cattle_Y_G00731;Dbxref=GeneID:132344427;gbkey=exon;gene=LOC132344427;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 13%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00731;transcript_id=Cattle_Y_T01188;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344427-4
haplotype2-0000357	CAT	exon	47214703	47214758	.	+	.	ID=Cattle_Y_T01189;Parent=Cattle_Y_G00731;Dbxref=GeneID:132344427;gbkey=exon;gene=LOC132344427;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 13%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00731;transcript_id=Cattle_Y_T01189;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344427-3
haplotype2-0000357	CAT	exon	47216063	47216197	.	+	.	ID=Cattle_Y_T01190;Parent=Cattle_Y_G00731;Dbxref=GeneID:132344427;gbkey=exon;gene=LOC132344427;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 13%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00731;transcript_id=Cattle_Y_T01190;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344427-2
haplotype2-0000357	CAT	exon	47216252	47216504	.	+	.	ID=Cattle_Y_T01191;Parent=Cattle_Y_G00731;Dbxref=GeneID:132344427;gbkey=exon;gene=LOC132344427;model_evidence=Supporting evidence includes similarity to: 3 Proteins, and 13%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00731;transcript_id=Cattle_Y_T01191;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344427
haplotype2-0000357	CAT	gene	47228519	47230112	.	+	.	ID=Cattle_Y_G00732;Dbxref=GeneID:132344618;Name=LOC132344618;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344618;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00732;source_id=gene-LOC132344618
haplotype2-0000357	CAT	exon	47228519	47230112	.	+	.	ID=Cattle_Y_T01192;Parent=Cattle_Y_G00732;Dbxref=GeneID:132344618;gbkey=exon;gene=LOC132344618;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00732;transcript_id=Cattle_Y_T01192;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344618
haplotype2-0000357	CAT	gene	47253753	47259735	.	+	.	ID=Cattle_Y_G00733;Dbxref=GeneID:132344426;Name=LOC132344426;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344426;gene_biotype=protein_coding;gene_id=Cattle_Y_G00733;source_id=gene-LOC132344426
haplotype2-0000357	CAT	mRNA	47253753	47259735	.	+	.	ID=Cattle_Y_T01193;Parent=Cattle_Y_G00733;Dbxref=GeneID:132344426,GenBank:XM_059884006.1;Name=XM_059884006.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;exception=unclassified transcription discrepancy;gbkey=mRNA;gene=LOC132344426;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 32%25 coverage of the annotated genomic feature by RNAseq alignments;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T01193;gene_id=Cattle_Y_G00733;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884006.1
haplotype2-0000357	CAT	exon	47253753	47253771	.	+	.	ID=Cattle_Y_E02122;Parent=Cattle_Y_T01193;Dbxref=GeneID:132344426,GenBank:XM_059884006.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;exception=unclassified transcription discrepancy;gbkey=mRNA;gene=LOC132344426;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T01193;gene_id=Cattle_Y_G00733;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884006.1-1
haplotype2-0000357	CAT	exon	47254020	47255234	.	+	.	ID=Cattle_Y_E02123;Parent=Cattle_Y_T01193;Dbxref=GeneID:132344426,GenBank:XM_059884006.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;exception=unclassified transcription discrepancy;gbkey=mRNA;gene=LOC132344426;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T01193;gene_id=Cattle_Y_G00733;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884006.1-2
haplotype2-0000357	CAT	exon	47255237	47255497	.	+	.	ID=Cattle_Y_E02124;Parent=Cattle_Y_T01193;Dbxref=GeneID:132344426,GenBank:XM_059884006.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;exception=unclassified transcription discrepancy;gbkey=mRNA;gene=LOC132344426;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T01193;gene_id=Cattle_Y_G00733;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884006.1-3
haplotype2-0000357	CAT	exon	47259698	47259735	.	+	.	ID=Cattle_Y_E02125;Parent=Cattle_Y_T01193;Dbxref=GeneID:132344426,GenBank:XM_059884006.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;exception=unclassified transcription discrepancy;gbkey=mRNA;gene=LOC132344426;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T01193;gene_id=Cattle_Y_G00733;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884006.1-4
haplotype2-0000357	CAT	CDS	47253753	47253771	.	+	0	ID=Cattle_Y_C01732;Parent=Cattle_Y_T01193;Dbxref=GeneID:132344426,GenBank:XP_059739989.1;Name=XP_059739989.1;Note=The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;exception=unclassified translation discrepancy;gbkey=CDS;gene=LOC132344426;product=LOW QUALITY PROTEIN: zinc finger protein 280B-like;protein_id=XP_059739989.1;gene_id=Cattle_Y_G00733;transcript_id=Cattle_Y_T01193;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47254020	47255234	.	+	2	ID=Cattle_Y_C01733;Parent=Cattle_Y_T01193;Dbxref=GeneID:132344426,GenBank:XP_059739989.1;Name=XP_059739989.1;Note=The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;exception=unclassified translation discrepancy;gbkey=CDS;gene=LOC132344426;product=LOW QUALITY PROTEIN: zinc finger protein 280B-like;protein_id=XP_059739989.1;gene_id=Cattle_Y_G00733;transcript_id=Cattle_Y_T01193;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47255237	47255497	.	+	2	ID=Cattle_Y_C01734;Parent=Cattle_Y_T01193;Dbxref=GeneID:132344426,GenBank:XP_059739989.1;Name=XP_059739989.1;Note=The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;exception=unclassified translation discrepancy;gbkey=CDS;gene=LOC132344426;product=LOW QUALITY PROTEIN: zinc finger protein 280B-like;protein_id=XP_059739989.1;gene_id=Cattle_Y_G00733;transcript_id=Cattle_Y_T01193;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47259698	47259735	.	+	2	ID=Cattle_Y_C01735;Parent=Cattle_Y_T01193;Dbxref=GeneID:132344426,GenBank:XP_059739989.1;Name=XP_059739989.1;Note=The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;exception=unclassified translation discrepancy;gbkey=CDS;gene=LOC132344426;product=LOW QUALITY PROTEIN: zinc finger protein 280B-like;protein_id=XP_059739989.1;gene_id=Cattle_Y_G00733;transcript_id=Cattle_Y_T01193;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47271347	47273570	.	-	.	ID=Cattle_Y_G00734;Dbxref=GeneID:132344616;Name=LOC132344616;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344616;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00734;source_id=gene-LOC132344616
haplotype2-0000357	CAT	exon	47271347	47271424	.	-	.	ID=Cattle_Y_T01194;Parent=Cattle_Y_G00734;Dbxref=GeneID:132344616;gbkey=exon;gene=LOC132344616;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00734;transcript_id=Cattle_Y_T01194;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344616-6
haplotype2-0000357	CAT	exon	47271541	47271686	.	-	.	ID=Cattle_Y_T01195;Parent=Cattle_Y_G00734;Dbxref=GeneID:132344616;gbkey=exon;gene=LOC132344616;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00734;transcript_id=Cattle_Y_T01195;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344616-5
haplotype2-0000357	CAT	exon	47271782	47271893	.	-	.	ID=Cattle_Y_T01196;Parent=Cattle_Y_G00734;Dbxref=GeneID:132344616;gbkey=exon;gene=LOC132344616;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00734;transcript_id=Cattle_Y_T01196;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344616-4
haplotype2-0000357	CAT	exon	47272077	47272154	.	-	.	ID=Cattle_Y_T01197;Parent=Cattle_Y_G00734;Dbxref=GeneID:132344616;gbkey=exon;gene=LOC132344616;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00734;transcript_id=Cattle_Y_T01197;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344616-3
haplotype2-0000357	CAT	exon	47272934	47273350	.	-	.	ID=Cattle_Y_T01198;Parent=Cattle_Y_G00734;Dbxref=GeneID:132344616;gbkey=exon;gene=LOC132344616;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00734;transcript_id=Cattle_Y_T01198;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344616-2
haplotype2-0000357	CAT	exon	47273447	47273570	.	-	.	ID=Cattle_Y_T01199;Parent=Cattle_Y_G00734;Dbxref=GeneID:132344616;gbkey=exon;gene=LOC132344616;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00734;transcript_id=Cattle_Y_T01199;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344616
haplotype2-0000357	CAT	gene	47278860	47281109	.	-	.	ID=Cattle_Y_G00735;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00735;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47278860	47278937	.	-	.	ID=Cattle_Y_T01200;Parent=Cattle_Y_G00735;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00735;transcript_id=Cattle_Y_T01200;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47279054	47279199	.	-	.	ID=Cattle_Y_T01201;Parent=Cattle_Y_G00735;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00735;transcript_id=Cattle_Y_T01201;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47279295	47279406	.	-	.	ID=Cattle_Y_T01202;Parent=Cattle_Y_G00735;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00735;transcript_id=Cattle_Y_T01202;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47279590	47279667	.	-	.	ID=Cattle_Y_T01203;Parent=Cattle_Y_G00735;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00735;transcript_id=Cattle_Y_T01203;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47280473	47280889	.	-	.	ID=Cattle_Y_T01204;Parent=Cattle_Y_G00735;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00735;transcript_id=Cattle_Y_T01204;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47280986	47281109	.	-	.	ID=Cattle_Y_T01205;Parent=Cattle_Y_G00735;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00735;transcript_id=Cattle_Y_T01205;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47286395	47288644	.	-	.	ID=Cattle_Y_G00736;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00736;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47286395	47286472	.	-	.	ID=Cattle_Y_T01206;Parent=Cattle_Y_G00736;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00736;transcript_id=Cattle_Y_T01206;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47286589	47286734	.	-	.	ID=Cattle_Y_T01207;Parent=Cattle_Y_G00736;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00736;transcript_id=Cattle_Y_T01207;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47286830	47286941	.	-	.	ID=Cattle_Y_T01208;Parent=Cattle_Y_G00736;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00736;transcript_id=Cattle_Y_T01208;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47287125	47287202	.	-	.	ID=Cattle_Y_T01209;Parent=Cattle_Y_G00736;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00736;transcript_id=Cattle_Y_T01209;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47288008	47288424	.	-	.	ID=Cattle_Y_T01210;Parent=Cattle_Y_G00736;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00736;transcript_id=Cattle_Y_T01210;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47288521	47288644	.	-	.	ID=Cattle_Y_T01211;Parent=Cattle_Y_G00736;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00736;transcript_id=Cattle_Y_T01211;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47293932	47296181	.	-	.	ID=Cattle_Y_G00737;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00737;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47293932	47294009	.	-	.	ID=Cattle_Y_T01212;Parent=Cattle_Y_G00737;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00737;transcript_id=Cattle_Y_T01212;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47294126	47294271	.	-	.	ID=Cattle_Y_T01213;Parent=Cattle_Y_G00737;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00737;transcript_id=Cattle_Y_T01213;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47294367	47294478	.	-	.	ID=Cattle_Y_T01214;Parent=Cattle_Y_G00737;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00737;transcript_id=Cattle_Y_T01214;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47294662	47294739	.	-	.	ID=Cattle_Y_T01215;Parent=Cattle_Y_G00737;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00737;transcript_id=Cattle_Y_T01215;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47295545	47295961	.	-	.	ID=Cattle_Y_T01216;Parent=Cattle_Y_G00737;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00737;transcript_id=Cattle_Y_T01216;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47296058	47296181	.	-	.	ID=Cattle_Y_T01217;Parent=Cattle_Y_G00737;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00737;transcript_id=Cattle_Y_T01217;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47301468	47303716	.	-	.	ID=Cattle_Y_G00738;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00738;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47301468	47301545	.	-	.	ID=Cattle_Y_T01218;Parent=Cattle_Y_G00738;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00738;transcript_id=Cattle_Y_T01218;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47301662	47301807	.	-	.	ID=Cattle_Y_T01219;Parent=Cattle_Y_G00738;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00738;transcript_id=Cattle_Y_T01219;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47301903	47302014	.	-	.	ID=Cattle_Y_T01220;Parent=Cattle_Y_G00738;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00738;transcript_id=Cattle_Y_T01220;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47302198	47302275	.	-	.	ID=Cattle_Y_T01221;Parent=Cattle_Y_G00738;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00738;transcript_id=Cattle_Y_T01221;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47303081	47303497	.	-	.	ID=Cattle_Y_T01222;Parent=Cattle_Y_G00738;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00738;transcript_id=Cattle_Y_T01222;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47303593	47303716	.	-	.	ID=Cattle_Y_T01223;Parent=Cattle_Y_G00738;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00738;transcript_id=Cattle_Y_T01223;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47308414	47310663	.	-	.	ID=Cattle_Y_G00739;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00739;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47308414	47308491	.	-	.	ID=Cattle_Y_T01224;Parent=Cattle_Y_G00739;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00739;transcript_id=Cattle_Y_T01224;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47308608	47308753	.	-	.	ID=Cattle_Y_T01225;Parent=Cattle_Y_G00739;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00739;transcript_id=Cattle_Y_T01225;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47308849	47308960	.	-	.	ID=Cattle_Y_T01226;Parent=Cattle_Y_G00739;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00739;transcript_id=Cattle_Y_T01226;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47309144	47309221	.	-	.	ID=Cattle_Y_T01227;Parent=Cattle_Y_G00739;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00739;transcript_id=Cattle_Y_T01227;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47310027	47310443	.	-	.	ID=Cattle_Y_T01228;Parent=Cattle_Y_G00739;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00739;transcript_id=Cattle_Y_T01228;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47310540	47310663	.	-	.	ID=Cattle_Y_T01229;Parent=Cattle_Y_G00739;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00739;transcript_id=Cattle_Y_T01229;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47315358	47317607	.	-	.	ID=Cattle_Y_G00740;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00740;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47315358	47315435	.	-	.	ID=Cattle_Y_T01230;Parent=Cattle_Y_G00740;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00740;transcript_id=Cattle_Y_T01230;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47315552	47315697	.	-	.	ID=Cattle_Y_T01231;Parent=Cattle_Y_G00740;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00740;transcript_id=Cattle_Y_T01231;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47315793	47315904	.	-	.	ID=Cattle_Y_T01232;Parent=Cattle_Y_G00740;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00740;transcript_id=Cattle_Y_T01232;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47316088	47316165	.	-	.	ID=Cattle_Y_T01233;Parent=Cattle_Y_G00740;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00740;transcript_id=Cattle_Y_T01233;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47316971	47317387	.	-	.	ID=Cattle_Y_T01234;Parent=Cattle_Y_G00740;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00740;transcript_id=Cattle_Y_T01234;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47317484	47317607	.	-	.	ID=Cattle_Y_T01235;Parent=Cattle_Y_G00740;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00740;transcript_id=Cattle_Y_T01235;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47322302	47324525	.	-	.	ID=Cattle_Y_G00741;Dbxref=GeneID:132344617;Name=LOC132344617;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344617;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00741;source_id=gene-LOC132344617
haplotype2-0000357	CAT	exon	47322302	47322379	.	-	.	ID=Cattle_Y_T01236;Parent=Cattle_Y_G00741;Dbxref=GeneID:132344617;gbkey=exon;gene=LOC132344617;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00741;transcript_id=Cattle_Y_T01236;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344617-6
haplotype2-0000357	CAT	exon	47322496	47322641	.	-	.	ID=Cattle_Y_T01237;Parent=Cattle_Y_G00741;Dbxref=GeneID:132344617;gbkey=exon;gene=LOC132344617;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00741;transcript_id=Cattle_Y_T01237;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344617-5
haplotype2-0000357	CAT	exon	47322737	47322848	.	-	.	ID=Cattle_Y_T01238;Parent=Cattle_Y_G00741;Dbxref=GeneID:132344617;gbkey=exon;gene=LOC132344617;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00741;transcript_id=Cattle_Y_T01238;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344617-4
haplotype2-0000357	CAT	exon	47323032	47323109	.	-	.	ID=Cattle_Y_T01239;Parent=Cattle_Y_G00741;Dbxref=GeneID:132344617;gbkey=exon;gene=LOC132344617;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00741;transcript_id=Cattle_Y_T01239;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344617-3
haplotype2-0000357	CAT	exon	47323889	47324305	.	-	.	ID=Cattle_Y_T01240;Parent=Cattle_Y_G00741;Dbxref=GeneID:132344617;gbkey=exon;gene=LOC132344617;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00741;transcript_id=Cattle_Y_T01240;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344617-2
haplotype2-0000357	CAT	exon	47324402	47324525	.	-	.	ID=Cattle_Y_T01241;Parent=Cattle_Y_G00741;Dbxref=GeneID:132344617;gbkey=exon;gene=LOC132344617;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00741;transcript_id=Cattle_Y_T01241;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344617
haplotype2-0000357	CAT	gene	47329817	47332066	.	-	.	ID=Cattle_Y_G00742;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00742;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47329817	47329894	.	-	.	ID=Cattle_Y_T01242;Parent=Cattle_Y_G00742;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00742;transcript_id=Cattle_Y_T01242;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47330011	47330156	.	-	.	ID=Cattle_Y_T01243;Parent=Cattle_Y_G00742;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00742;transcript_id=Cattle_Y_T01243;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47330252	47330363	.	-	.	ID=Cattle_Y_T01244;Parent=Cattle_Y_G00742;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00742;transcript_id=Cattle_Y_T01244;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47330547	47330624	.	-	.	ID=Cattle_Y_T01245;Parent=Cattle_Y_G00742;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00742;transcript_id=Cattle_Y_T01245;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47331430	47331846	.	-	.	ID=Cattle_Y_T01246;Parent=Cattle_Y_G00742;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00742;transcript_id=Cattle_Y_T01246;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47331943	47332066	.	-	.	ID=Cattle_Y_T01247;Parent=Cattle_Y_G00742;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00742;transcript_id=Cattle_Y_T01247;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47344890	47347139	.	-	.	ID=Cattle_Y_G00743;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00743;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47344890	47344967	.	-	.	ID=Cattle_Y_T01248;Parent=Cattle_Y_G00743;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00743;transcript_id=Cattle_Y_T01248;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47345084	47345229	.	-	.	ID=Cattle_Y_T01249;Parent=Cattle_Y_G00743;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00743;transcript_id=Cattle_Y_T01249;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47345325	47345436	.	-	.	ID=Cattle_Y_T01250;Parent=Cattle_Y_G00743;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00743;transcript_id=Cattle_Y_T01250;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47345620	47345697	.	-	.	ID=Cattle_Y_T01251;Parent=Cattle_Y_G00743;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00743;transcript_id=Cattle_Y_T01251;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47346503	47346919	.	-	.	ID=Cattle_Y_T01252;Parent=Cattle_Y_G00743;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00743;transcript_id=Cattle_Y_T01252;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47347016	47347139	.	-	.	ID=Cattle_Y_T01253;Parent=Cattle_Y_G00743;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00743;transcript_id=Cattle_Y_T01253;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47352427	47354676	.	-	.	ID=Cattle_Y_G00744;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00744;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47352427	47352504	.	-	.	ID=Cattle_Y_T01254;Parent=Cattle_Y_G00744;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00744;transcript_id=Cattle_Y_T01254;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47352621	47352766	.	-	.	ID=Cattle_Y_T01255;Parent=Cattle_Y_G00744;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00744;transcript_id=Cattle_Y_T01255;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47352862	47352973	.	-	.	ID=Cattle_Y_T01256;Parent=Cattle_Y_G00744;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00744;transcript_id=Cattle_Y_T01256;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47353157	47353234	.	-	.	ID=Cattle_Y_T01257;Parent=Cattle_Y_G00744;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00744;transcript_id=Cattle_Y_T01257;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47354040	47354456	.	-	.	ID=Cattle_Y_T01258;Parent=Cattle_Y_G00744;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00744;transcript_id=Cattle_Y_T01258;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47354553	47354676	.	-	.	ID=Cattle_Y_T01259;Parent=Cattle_Y_G00744;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00744;transcript_id=Cattle_Y_T01259;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47359963	47362212	.	-	.	ID=Cattle_Y_G00745;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00745;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47359963	47360040	.	-	.	ID=Cattle_Y_T01260;Parent=Cattle_Y_G00745;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00745;transcript_id=Cattle_Y_T01260;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47360157	47360302	.	-	.	ID=Cattle_Y_T01261;Parent=Cattle_Y_G00745;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00745;transcript_id=Cattle_Y_T01261;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47360398	47360509	.	-	.	ID=Cattle_Y_T01262;Parent=Cattle_Y_G00745;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00745;transcript_id=Cattle_Y_T01262;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47360693	47360770	.	-	.	ID=Cattle_Y_T01263;Parent=Cattle_Y_G00745;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00745;transcript_id=Cattle_Y_T01263;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47361576	47361992	.	-	.	ID=Cattle_Y_T01264;Parent=Cattle_Y_G00745;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00745;transcript_id=Cattle_Y_T01264;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47362089	47362212	.	-	.	ID=Cattle_Y_T01265;Parent=Cattle_Y_G00745;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00745;transcript_id=Cattle_Y_T01265;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47367499	47369748	.	-	.	ID=Cattle_Y_G00746;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00746;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47367499	47367576	.	-	.	ID=Cattle_Y_T01266;Parent=Cattle_Y_G00746;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00746;transcript_id=Cattle_Y_T01266;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47367693	47367838	.	-	.	ID=Cattle_Y_T01267;Parent=Cattle_Y_G00746;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00746;transcript_id=Cattle_Y_T01267;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47367934	47368045	.	-	.	ID=Cattle_Y_T01268;Parent=Cattle_Y_G00746;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00746;transcript_id=Cattle_Y_T01268;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47368229	47368306	.	-	.	ID=Cattle_Y_T01269;Parent=Cattle_Y_G00746;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00746;transcript_id=Cattle_Y_T01269;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47369112	47369528	.	-	.	ID=Cattle_Y_T01270;Parent=Cattle_Y_G00746;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00746;transcript_id=Cattle_Y_T01270;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47369625	47369748	.	-	.	ID=Cattle_Y_T01271;Parent=Cattle_Y_G00746;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00746;transcript_id=Cattle_Y_T01271;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47375036	47377284	.	-	.	ID=Cattle_Y_G00747;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00747;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47375036	47375113	.	-	.	ID=Cattle_Y_T01272;Parent=Cattle_Y_G00747;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00747;transcript_id=Cattle_Y_T01272;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47375230	47375375	.	-	.	ID=Cattle_Y_T01273;Parent=Cattle_Y_G00747;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00747;transcript_id=Cattle_Y_T01273;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47375471	47375582	.	-	.	ID=Cattle_Y_T01274;Parent=Cattle_Y_G00747;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00747;transcript_id=Cattle_Y_T01274;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47375766	47375843	.	-	.	ID=Cattle_Y_T01275;Parent=Cattle_Y_G00747;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00747;transcript_id=Cattle_Y_T01275;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47376649	47377065	.	-	.	ID=Cattle_Y_T01276;Parent=Cattle_Y_G00747;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00747;transcript_id=Cattle_Y_T01276;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47377161	47377284	.	-	.	ID=Cattle_Y_T01277;Parent=Cattle_Y_G00747;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00747;transcript_id=Cattle_Y_T01277;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47381981	47384204	.	-	.	ID=Cattle_Y_G00748;Dbxref=GeneID:132344616;Name=LOC132344616;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344616;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00748;source_id=gene-LOC132344616
haplotype2-0000357	CAT	exon	47381981	47382058	.	-	.	ID=Cattle_Y_T01278;Parent=Cattle_Y_G00748;Dbxref=GeneID:132344616;gbkey=exon;gene=LOC132344616;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00748;transcript_id=Cattle_Y_T01278;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344616-6
haplotype2-0000357	CAT	exon	47382175	47382320	.	-	.	ID=Cattle_Y_T01279;Parent=Cattle_Y_G00748;Dbxref=GeneID:132344616;gbkey=exon;gene=LOC132344616;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00748;transcript_id=Cattle_Y_T01279;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344616-5
haplotype2-0000357	CAT	exon	47382416	47382527	.	-	.	ID=Cattle_Y_T01280;Parent=Cattle_Y_G00748;Dbxref=GeneID:132344616;gbkey=exon;gene=LOC132344616;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00748;transcript_id=Cattle_Y_T01280;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344616-4
haplotype2-0000357	CAT	exon	47382711	47382788	.	-	.	ID=Cattle_Y_T01281;Parent=Cattle_Y_G00748;Dbxref=GeneID:132344616;gbkey=exon;gene=LOC132344616;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00748;transcript_id=Cattle_Y_T01281;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344616-3
haplotype2-0000357	CAT	exon	47383568	47383984	.	-	.	ID=Cattle_Y_T01282;Parent=Cattle_Y_G00748;Dbxref=GeneID:132344616;gbkey=exon;gene=LOC132344616;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00748;transcript_id=Cattle_Y_T01282;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344616-2
haplotype2-0000357	CAT	exon	47384081	47384204	.	-	.	ID=Cattle_Y_T01283;Parent=Cattle_Y_G00748;Dbxref=GeneID:132344616;gbkey=exon;gene=LOC132344616;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00748;transcript_id=Cattle_Y_T01283;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344616
haplotype2-0000357	CAT	gene	47389494	47391743	.	-	.	ID=Cattle_Y_G00749;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00749;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47389494	47389571	.	-	.	ID=Cattle_Y_T01284;Parent=Cattle_Y_G00749;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00749;transcript_id=Cattle_Y_T01284;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47389688	47389833	.	-	.	ID=Cattle_Y_T01285;Parent=Cattle_Y_G00749;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00749;transcript_id=Cattle_Y_T01285;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47389929	47390040	.	-	.	ID=Cattle_Y_T01286;Parent=Cattle_Y_G00749;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00749;transcript_id=Cattle_Y_T01286;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47390224	47390301	.	-	.	ID=Cattle_Y_T01287;Parent=Cattle_Y_G00749;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00749;transcript_id=Cattle_Y_T01287;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47391107	47391523	.	-	.	ID=Cattle_Y_T01288;Parent=Cattle_Y_G00749;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00749;transcript_id=Cattle_Y_T01288;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47391620	47391743	.	-	.	ID=Cattle_Y_T01289;Parent=Cattle_Y_G00749;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00749;transcript_id=Cattle_Y_T01289;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47397005	47399253	.	-	.	ID=Cattle_Y_G00750;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00750;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47397005	47397082	.	-	.	ID=Cattle_Y_T01290;Parent=Cattle_Y_G00750;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00750;transcript_id=Cattle_Y_T01290;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47397199	47397344	.	-	.	ID=Cattle_Y_T01291;Parent=Cattle_Y_G00750;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00750;transcript_id=Cattle_Y_T01291;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47397440	47397551	.	-	.	ID=Cattle_Y_T01292;Parent=Cattle_Y_G00750;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00750;transcript_id=Cattle_Y_T01292;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47397735	47397812	.	-	.	ID=Cattle_Y_T01293;Parent=Cattle_Y_G00750;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00750;transcript_id=Cattle_Y_T01293;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47398618	47399034	.	-	.	ID=Cattle_Y_T01294;Parent=Cattle_Y_G00750;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00750;transcript_id=Cattle_Y_T01294;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47399130	47399253	.	-	.	ID=Cattle_Y_T01295;Parent=Cattle_Y_G00750;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00750;transcript_id=Cattle_Y_T01295;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47404539	47406787	.	-	.	ID=Cattle_Y_G00751;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00751;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47404539	47404616	.	-	.	ID=Cattle_Y_T01296;Parent=Cattle_Y_G00751;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00751;transcript_id=Cattle_Y_T01296;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47404733	47404878	.	-	.	ID=Cattle_Y_T01297;Parent=Cattle_Y_G00751;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00751;transcript_id=Cattle_Y_T01297;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47404974	47405085	.	-	.	ID=Cattle_Y_T01298;Parent=Cattle_Y_G00751;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00751;transcript_id=Cattle_Y_T01298;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47405269	47405346	.	-	.	ID=Cattle_Y_T01299;Parent=Cattle_Y_G00751;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00751;transcript_id=Cattle_Y_T01299;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47406152	47406568	.	-	.	ID=Cattle_Y_T01300;Parent=Cattle_Y_G00751;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00751;transcript_id=Cattle_Y_T01300;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47406664	47406787	.	-	.	ID=Cattle_Y_T01301;Parent=Cattle_Y_G00751;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00751;transcript_id=Cattle_Y_T01301;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47412005	47414254	.	-	.	ID=Cattle_Y_G00752;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00752;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47412005	47412082	.	-	.	ID=Cattle_Y_T01302;Parent=Cattle_Y_G00752;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00752;transcript_id=Cattle_Y_T01302;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47412199	47412344	.	-	.	ID=Cattle_Y_T01303;Parent=Cattle_Y_G00752;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00752;transcript_id=Cattle_Y_T01303;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47412440	47412551	.	-	.	ID=Cattle_Y_T01304;Parent=Cattle_Y_G00752;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00752;transcript_id=Cattle_Y_T01304;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47412735	47412812	.	-	.	ID=Cattle_Y_T01305;Parent=Cattle_Y_G00752;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00752;transcript_id=Cattle_Y_T01305;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47413618	47414034	.	-	.	ID=Cattle_Y_T01306;Parent=Cattle_Y_G00752;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00752;transcript_id=Cattle_Y_T01306;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47414131	47414254	.	-	.	ID=Cattle_Y_T01307;Parent=Cattle_Y_G00752;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00752;transcript_id=Cattle_Y_T01307;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47419540	47421789	.	-	.	ID=Cattle_Y_G00753;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00753;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47419540	47419617	.	-	.	ID=Cattle_Y_T01308;Parent=Cattle_Y_G00753;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00753;transcript_id=Cattle_Y_T01308;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47419734	47419879	.	-	.	ID=Cattle_Y_T01309;Parent=Cattle_Y_G00753;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00753;transcript_id=Cattle_Y_T01309;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47419975	47420086	.	-	.	ID=Cattle_Y_T01310;Parent=Cattle_Y_G00753;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00753;transcript_id=Cattle_Y_T01310;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47420270	47420347	.	-	.	ID=Cattle_Y_T01311;Parent=Cattle_Y_G00753;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00753;transcript_id=Cattle_Y_T01311;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47421153	47421569	.	-	.	ID=Cattle_Y_T01312;Parent=Cattle_Y_G00753;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00753;transcript_id=Cattle_Y_T01312;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47421666	47421789	.	-	.	ID=Cattle_Y_T01313;Parent=Cattle_Y_G00753;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00753;transcript_id=Cattle_Y_T01313;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47427079	47429328	.	-	.	ID=Cattle_Y_G00754;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00754;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47427079	47427156	.	-	.	ID=Cattle_Y_T01314;Parent=Cattle_Y_G00754;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00754;transcript_id=Cattle_Y_T01314;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47427273	47427418	.	-	.	ID=Cattle_Y_T01315;Parent=Cattle_Y_G00754;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00754;transcript_id=Cattle_Y_T01315;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47427514	47427625	.	-	.	ID=Cattle_Y_T01316;Parent=Cattle_Y_G00754;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00754;transcript_id=Cattle_Y_T01316;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47427809	47427886	.	-	.	ID=Cattle_Y_T01317;Parent=Cattle_Y_G00754;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00754;transcript_id=Cattle_Y_T01317;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47428692	47429108	.	-	.	ID=Cattle_Y_T01318;Parent=Cattle_Y_G00754;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00754;transcript_id=Cattle_Y_T01318;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47429205	47429328	.	-	.	ID=Cattle_Y_T01319;Parent=Cattle_Y_G00754;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00754;transcript_id=Cattle_Y_T01319;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47434617	47436865	.	-	.	ID=Cattle_Y_G00755;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00755;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47434617	47434694	.	-	.	ID=Cattle_Y_T01320;Parent=Cattle_Y_G00755;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00755;transcript_id=Cattle_Y_T01320;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47434811	47434956	.	-	.	ID=Cattle_Y_T01321;Parent=Cattle_Y_G00755;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00755;transcript_id=Cattle_Y_T01321;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47435052	47435163	.	-	.	ID=Cattle_Y_T01322;Parent=Cattle_Y_G00755;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00755;transcript_id=Cattle_Y_T01322;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47435347	47435424	.	-	.	ID=Cattle_Y_T01323;Parent=Cattle_Y_G00755;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00755;transcript_id=Cattle_Y_T01323;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47436230	47436646	.	-	.	ID=Cattle_Y_T01324;Parent=Cattle_Y_G00755;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00755;transcript_id=Cattle_Y_T01324;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47436742	47436865	.	-	.	ID=Cattle_Y_T01325;Parent=Cattle_Y_G00755;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00755;transcript_id=Cattle_Y_T01325;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47441563	47443786	.	-	.	ID=Cattle_Y_G00756;Dbxref=GeneID:132344616;Name=LOC132344616;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344616;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00756;source_id=gene-LOC132344616
haplotype2-0000357	CAT	exon	47441563	47441640	.	-	.	ID=Cattle_Y_T01326;Parent=Cattle_Y_G00756;Dbxref=GeneID:132344616;gbkey=exon;gene=LOC132344616;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00756;transcript_id=Cattle_Y_T01326;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344616-6
haplotype2-0000357	CAT	exon	47441757	47441902	.	-	.	ID=Cattle_Y_T01327;Parent=Cattle_Y_G00756;Dbxref=GeneID:132344616;gbkey=exon;gene=LOC132344616;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00756;transcript_id=Cattle_Y_T01327;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344616-5
haplotype2-0000357	CAT	exon	47441998	47442109	.	-	.	ID=Cattle_Y_T01328;Parent=Cattle_Y_G00756;Dbxref=GeneID:132344616;gbkey=exon;gene=LOC132344616;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00756;transcript_id=Cattle_Y_T01328;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344616-4
haplotype2-0000357	CAT	exon	47442293	47442370	.	-	.	ID=Cattle_Y_T01329;Parent=Cattle_Y_G00756;Dbxref=GeneID:132344616;gbkey=exon;gene=LOC132344616;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00756;transcript_id=Cattle_Y_T01329;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344616-3
haplotype2-0000357	CAT	exon	47443150	47443566	.	-	.	ID=Cattle_Y_T01330;Parent=Cattle_Y_G00756;Dbxref=GeneID:132344616;gbkey=exon;gene=LOC132344616;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00756;transcript_id=Cattle_Y_T01330;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344616-2
haplotype2-0000357	CAT	exon	47443663	47443786	.	-	.	ID=Cattle_Y_T01331;Parent=Cattle_Y_G00756;Dbxref=GeneID:132344616;gbkey=exon;gene=LOC132344616;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G00756;transcript_id=Cattle_Y_T01331;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344616
haplotype2-0000357	CAT	gene	47449076	47451325	.	-	.	ID=Cattle_Y_G00757;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00757;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47449076	47449153	.	-	.	ID=Cattle_Y_T01332;Parent=Cattle_Y_G00757;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00757;transcript_id=Cattle_Y_T01332;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47449270	47449415	.	-	.	ID=Cattle_Y_T01333;Parent=Cattle_Y_G00757;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00757;transcript_id=Cattle_Y_T01333;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47449511	47449622	.	-	.	ID=Cattle_Y_T01334;Parent=Cattle_Y_G00757;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00757;transcript_id=Cattle_Y_T01334;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47449806	47449883	.	-	.	ID=Cattle_Y_T01335;Parent=Cattle_Y_G00757;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00757;transcript_id=Cattle_Y_T01335;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47450689	47451105	.	-	.	ID=Cattle_Y_T01336;Parent=Cattle_Y_G00757;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00757;transcript_id=Cattle_Y_T01336;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47451202	47451325	.	-	.	ID=Cattle_Y_T01337;Parent=Cattle_Y_G00757;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00757;transcript_id=Cattle_Y_T01337;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47456616	47458865	.	-	.	ID=Cattle_Y_G00758;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00758;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47456616	47456693	.	-	.	ID=Cattle_Y_T01338;Parent=Cattle_Y_G00758;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00758;transcript_id=Cattle_Y_T01338;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47456810	47456955	.	-	.	ID=Cattle_Y_T01339;Parent=Cattle_Y_G00758;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00758;transcript_id=Cattle_Y_T01339;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47457051	47457162	.	-	.	ID=Cattle_Y_T01340;Parent=Cattle_Y_G00758;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00758;transcript_id=Cattle_Y_T01340;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47457346	47457423	.	-	.	ID=Cattle_Y_T01341;Parent=Cattle_Y_G00758;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00758;transcript_id=Cattle_Y_T01341;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47458229	47458645	.	-	.	ID=Cattle_Y_T01342;Parent=Cattle_Y_G00758;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00758;transcript_id=Cattle_Y_T01342;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47458742	47458865	.	-	.	ID=Cattle_Y_T01343;Parent=Cattle_Y_G00758;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00758;transcript_id=Cattle_Y_T01343;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47464151	47466397	.	-	.	ID=Cattle_Y_G00759;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00759;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47464151	47464228	.	-	.	ID=Cattle_Y_T01344;Parent=Cattle_Y_G00759;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00759;transcript_id=Cattle_Y_T01344;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47464345	47464490	.	-	.	ID=Cattle_Y_T01345;Parent=Cattle_Y_G00759;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00759;transcript_id=Cattle_Y_T01345;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47464586	47464697	.	-	.	ID=Cattle_Y_T01346;Parent=Cattle_Y_G00759;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00759;transcript_id=Cattle_Y_T01346;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47464881	47464958	.	-	.	ID=Cattle_Y_T01347;Parent=Cattle_Y_G00759;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00759;transcript_id=Cattle_Y_T01347;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47465762	47466178	.	-	.	ID=Cattle_Y_T01348;Parent=Cattle_Y_G00759;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00759;transcript_id=Cattle_Y_T01348;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47466274	47466397	.	-	.	ID=Cattle_Y_T01349;Parent=Cattle_Y_G00759;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00759;transcript_id=Cattle_Y_T01349;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47471620	47473868	.	-	.	ID=Cattle_Y_G00760;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00760;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47471620	47471697	.	-	.	ID=Cattle_Y_T01350;Parent=Cattle_Y_G00760;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00760;transcript_id=Cattle_Y_T01350;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47471814	47471959	.	-	.	ID=Cattle_Y_T01351;Parent=Cattle_Y_G00760;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00760;transcript_id=Cattle_Y_T01351;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47472055	47472166	.	-	.	ID=Cattle_Y_T01352;Parent=Cattle_Y_G00760;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00760;transcript_id=Cattle_Y_T01352;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47472350	47472427	.	-	.	ID=Cattle_Y_T01353;Parent=Cattle_Y_G00760;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00760;transcript_id=Cattle_Y_T01353;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47473233	47473649	.	-	.	ID=Cattle_Y_T01354;Parent=Cattle_Y_G00760;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00760;transcript_id=Cattle_Y_T01354;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47473745	47473868	.	-	.	ID=Cattle_Y_T01355;Parent=Cattle_Y_G00760;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00760;transcript_id=Cattle_Y_T01355;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47479094	47481342	.	-	.	ID=Cattle_Y_G00761;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00761;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47479094	47479171	.	-	.	ID=Cattle_Y_T01356;Parent=Cattle_Y_G00761;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00761;transcript_id=Cattle_Y_T01356;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47479288	47479433	.	-	.	ID=Cattle_Y_T01357;Parent=Cattle_Y_G00761;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00761;transcript_id=Cattle_Y_T01357;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47479529	47479640	.	-	.	ID=Cattle_Y_T01358;Parent=Cattle_Y_G00761;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00761;transcript_id=Cattle_Y_T01358;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47479824	47479901	.	-	.	ID=Cattle_Y_T01359;Parent=Cattle_Y_G00761;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00761;transcript_id=Cattle_Y_T01359;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47480707	47481123	.	-	.	ID=Cattle_Y_T01360;Parent=Cattle_Y_G00761;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00761;transcript_id=Cattle_Y_T01360;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47481219	47481342	.	-	.	ID=Cattle_Y_T01361;Parent=Cattle_Y_G00761;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00761;transcript_id=Cattle_Y_T01361;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47486565	47488813	.	-	.	ID=Cattle_Y_G00762;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00762;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47486565	47486642	.	-	.	ID=Cattle_Y_T01362;Parent=Cattle_Y_G00762;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00762;transcript_id=Cattle_Y_T01362;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47486759	47486904	.	-	.	ID=Cattle_Y_T01363;Parent=Cattle_Y_G00762;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00762;transcript_id=Cattle_Y_T01363;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47487000	47487111	.	-	.	ID=Cattle_Y_T01364;Parent=Cattle_Y_G00762;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00762;transcript_id=Cattle_Y_T01364;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47487295	47487372	.	-	.	ID=Cattle_Y_T01365;Parent=Cattle_Y_G00762;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00762;transcript_id=Cattle_Y_T01365;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47488178	47488594	.	-	.	ID=Cattle_Y_T01366;Parent=Cattle_Y_G00762;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00762;transcript_id=Cattle_Y_T01366;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47488690	47488813	.	-	.	ID=Cattle_Y_T01367;Parent=Cattle_Y_G00762;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00762;transcript_id=Cattle_Y_T01367;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47494038	47496286	.	-	.	ID=Cattle_Y_G00763;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00763;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47494038	47494115	.	-	.	ID=Cattle_Y_T01368;Parent=Cattle_Y_G00763;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00763;transcript_id=Cattle_Y_T01368;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47494232	47494377	.	-	.	ID=Cattle_Y_T01369;Parent=Cattle_Y_G00763;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00763;transcript_id=Cattle_Y_T01369;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47494473	47494584	.	-	.	ID=Cattle_Y_T01370;Parent=Cattle_Y_G00763;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00763;transcript_id=Cattle_Y_T01370;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47494768	47494845	.	-	.	ID=Cattle_Y_T01371;Parent=Cattle_Y_G00763;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00763;transcript_id=Cattle_Y_T01371;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47495651	47496067	.	-	.	ID=Cattle_Y_T01372;Parent=Cattle_Y_G00763;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00763;transcript_id=Cattle_Y_T01372;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47496163	47496286	.	-	.	ID=Cattle_Y_T01373;Parent=Cattle_Y_G00763;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00763;transcript_id=Cattle_Y_T01373;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47501512	47503760	.	-	.	ID=Cattle_Y_G00764;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00764;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47501512	47501589	.	-	.	ID=Cattle_Y_T01374;Parent=Cattle_Y_G00764;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00764;transcript_id=Cattle_Y_T01374;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47501706	47501851	.	-	.	ID=Cattle_Y_T01375;Parent=Cattle_Y_G00764;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00764;transcript_id=Cattle_Y_T01375;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47501947	47502058	.	-	.	ID=Cattle_Y_T01376;Parent=Cattle_Y_G00764;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00764;transcript_id=Cattle_Y_T01376;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47502242	47502319	.	-	.	ID=Cattle_Y_T01377;Parent=Cattle_Y_G00764;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00764;transcript_id=Cattle_Y_T01377;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47503125	47503541	.	-	.	ID=Cattle_Y_T01378;Parent=Cattle_Y_G00764;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00764;transcript_id=Cattle_Y_T01378;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47503637	47503760	.	-	.	ID=Cattle_Y_T01379;Parent=Cattle_Y_G00764;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00764;transcript_id=Cattle_Y_T01379;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47508980	47511226	.	-	.	ID=Cattle_Y_G00765;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00765;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47508980	47509057	.	-	.	ID=Cattle_Y_T01380;Parent=Cattle_Y_G00765;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00765;transcript_id=Cattle_Y_T01380;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47509174	47509319	.	-	.	ID=Cattle_Y_T01381;Parent=Cattle_Y_G00765;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00765;transcript_id=Cattle_Y_T01381;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47509415	47509526	.	-	.	ID=Cattle_Y_T01382;Parent=Cattle_Y_G00765;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00765;transcript_id=Cattle_Y_T01382;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47509710	47509787	.	-	.	ID=Cattle_Y_T01383;Parent=Cattle_Y_G00765;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00765;transcript_id=Cattle_Y_T01383;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47510591	47511007	.	-	.	ID=Cattle_Y_T01384;Parent=Cattle_Y_G00765;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00765;transcript_id=Cattle_Y_T01384;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47511103	47511226	.	-	.	ID=Cattle_Y_T01385;Parent=Cattle_Y_G00765;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00765;transcript_id=Cattle_Y_T01385;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47516446	47518682	.	-	.	ID=Cattle_Y_G00766;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00766;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47516446	47516523	.	-	.	ID=Cattle_Y_T01386;Parent=Cattle_Y_G00766;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00766;transcript_id=Cattle_Y_T01386;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47516640	47516785	.	-	.	ID=Cattle_Y_T01387;Parent=Cattle_Y_G00766;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00766;transcript_id=Cattle_Y_T01387;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47516881	47516992	.	-	.	ID=Cattle_Y_T01388;Parent=Cattle_Y_G00766;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00766;transcript_id=Cattle_Y_T01388;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47517176	47517253	.	-	.	ID=Cattle_Y_T01389;Parent=Cattle_Y_G00766;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00766;transcript_id=Cattle_Y_T01389;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47518047	47518463	.	-	.	ID=Cattle_Y_T01390;Parent=Cattle_Y_G00766;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00766;transcript_id=Cattle_Y_T01390;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47518559	47518682	.	-	.	ID=Cattle_Y_T01391;Parent=Cattle_Y_G00766;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00766;transcript_id=Cattle_Y_T01391;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47523905	47526139	.	-	.	ID=Cattle_Y_G00767;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00767;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47523905	47523982	.	-	.	ID=Cattle_Y_T01392;Parent=Cattle_Y_G00767;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00767;transcript_id=Cattle_Y_T01392;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47524099	47524244	.	-	.	ID=Cattle_Y_T01393;Parent=Cattle_Y_G00767;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00767;transcript_id=Cattle_Y_T01393;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47524340	47524451	.	-	.	ID=Cattle_Y_T01394;Parent=Cattle_Y_G00767;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00767;transcript_id=Cattle_Y_T01394;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47524635	47524712	.	-	.	ID=Cattle_Y_T01395;Parent=Cattle_Y_G00767;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00767;transcript_id=Cattle_Y_T01395;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47525504	47525920	.	-	.	ID=Cattle_Y_T01396;Parent=Cattle_Y_G00767;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00767;transcript_id=Cattle_Y_T01396;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47526016	47526139	.	-	.	ID=Cattle_Y_T01397;Parent=Cattle_Y_G00767;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00767;transcript_id=Cattle_Y_T01397;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47531357	47533605	.	-	.	ID=Cattle_Y_G00768;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00768;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47531357	47531434	.	-	.	ID=Cattle_Y_T01398;Parent=Cattle_Y_G00768;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00768;transcript_id=Cattle_Y_T01398;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47531551	47531696	.	-	.	ID=Cattle_Y_T01399;Parent=Cattle_Y_G00768;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00768;transcript_id=Cattle_Y_T01399;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47531792	47531903	.	-	.	ID=Cattle_Y_T01400;Parent=Cattle_Y_G00768;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00768;transcript_id=Cattle_Y_T01400;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47532087	47532164	.	-	.	ID=Cattle_Y_T01401;Parent=Cattle_Y_G00768;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00768;transcript_id=Cattle_Y_T01401;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47532970	47533386	.	-	.	ID=Cattle_Y_T01402;Parent=Cattle_Y_G00768;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00768;transcript_id=Cattle_Y_T01402;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47533482	47533605	.	-	.	ID=Cattle_Y_T01403;Parent=Cattle_Y_G00768;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00768;transcript_id=Cattle_Y_T01403;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47538825	47541061	.	-	.	ID=Cattle_Y_G00769;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00769;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47538825	47538902	.	-	.	ID=Cattle_Y_T01404;Parent=Cattle_Y_G00769;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00769;transcript_id=Cattle_Y_T01404;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47539019	47539164	.	-	.	ID=Cattle_Y_T01405;Parent=Cattle_Y_G00769;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00769;transcript_id=Cattle_Y_T01405;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47539260	47539371	.	-	.	ID=Cattle_Y_T01406;Parent=Cattle_Y_G00769;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00769;transcript_id=Cattle_Y_T01406;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47539555	47539632	.	-	.	ID=Cattle_Y_T01407;Parent=Cattle_Y_G00769;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00769;transcript_id=Cattle_Y_T01407;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47540426	47540842	.	-	.	ID=Cattle_Y_T01408;Parent=Cattle_Y_G00769;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00769;transcript_id=Cattle_Y_T01408;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47540938	47541061	.	-	.	ID=Cattle_Y_T01409;Parent=Cattle_Y_G00769;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00769;transcript_id=Cattle_Y_T01409;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47546284	47548520	.	-	.	ID=Cattle_Y_G00770;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00770;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47546284	47546361	.	-	.	ID=Cattle_Y_T01410;Parent=Cattle_Y_G00770;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00770;transcript_id=Cattle_Y_T01410;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47546478	47546623	.	-	.	ID=Cattle_Y_T01411;Parent=Cattle_Y_G00770;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00770;transcript_id=Cattle_Y_T01411;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47546719	47546830	.	-	.	ID=Cattle_Y_T01412;Parent=Cattle_Y_G00770;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00770;transcript_id=Cattle_Y_T01412;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47547014	47547091	.	-	.	ID=Cattle_Y_T01413;Parent=Cattle_Y_G00770;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00770;transcript_id=Cattle_Y_T01413;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47547885	47548301	.	-	.	ID=Cattle_Y_T01414;Parent=Cattle_Y_G00770;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00770;transcript_id=Cattle_Y_T01414;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47548397	47548520	.	-	.	ID=Cattle_Y_T01415;Parent=Cattle_Y_G00770;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00770;transcript_id=Cattle_Y_T01415;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47553741	47555987	.	-	.	ID=Cattle_Y_G00771;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00771;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47553741	47553818	.	-	.	ID=Cattle_Y_T01416;Parent=Cattle_Y_G00771;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00771;transcript_id=Cattle_Y_T01416;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47553935	47554080	.	-	.	ID=Cattle_Y_T01417;Parent=Cattle_Y_G00771;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00771;transcript_id=Cattle_Y_T01417;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47554176	47554287	.	-	.	ID=Cattle_Y_T01418;Parent=Cattle_Y_G00771;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00771;transcript_id=Cattle_Y_T01418;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47554471	47554548	.	-	.	ID=Cattle_Y_T01419;Parent=Cattle_Y_G00771;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00771;transcript_id=Cattle_Y_T01419;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47555352	47555768	.	-	.	ID=Cattle_Y_T01420;Parent=Cattle_Y_G00771;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00771;transcript_id=Cattle_Y_T01420;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47555864	47555987	.	-	.	ID=Cattle_Y_T01421;Parent=Cattle_Y_G00771;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00771;transcript_id=Cattle_Y_T01421;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47561210	47563456	.	-	.	ID=Cattle_Y_G00772;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00772;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47561210	47561287	.	-	.	ID=Cattle_Y_T01422;Parent=Cattle_Y_G00772;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00772;transcript_id=Cattle_Y_T01422;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47561404	47561549	.	-	.	ID=Cattle_Y_T01423;Parent=Cattle_Y_G00772;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00772;transcript_id=Cattle_Y_T01423;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47561645	47561756	.	-	.	ID=Cattle_Y_T01424;Parent=Cattle_Y_G00772;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00772;transcript_id=Cattle_Y_T01424;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47561940	47562017	.	-	.	ID=Cattle_Y_T01425;Parent=Cattle_Y_G00772;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00772;transcript_id=Cattle_Y_T01425;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47562821	47563237	.	-	.	ID=Cattle_Y_T01426;Parent=Cattle_Y_G00772;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00772;transcript_id=Cattle_Y_T01426;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47563333	47563456	.	-	.	ID=Cattle_Y_T01427;Parent=Cattle_Y_G00772;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00772;transcript_id=Cattle_Y_T01427;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47568678	47570924	.	-	.	ID=Cattle_Y_G00773;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00773;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47568678	47568755	.	-	.	ID=Cattle_Y_T01428;Parent=Cattle_Y_G00773;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00773;transcript_id=Cattle_Y_T01428;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47568872	47569017	.	-	.	ID=Cattle_Y_T01429;Parent=Cattle_Y_G00773;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00773;transcript_id=Cattle_Y_T01429;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47569113	47569224	.	-	.	ID=Cattle_Y_T01430;Parent=Cattle_Y_G00773;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00773;transcript_id=Cattle_Y_T01430;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47569408	47569485	.	-	.	ID=Cattle_Y_T01431;Parent=Cattle_Y_G00773;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00773;transcript_id=Cattle_Y_T01431;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47570289	47570705	.	-	.	ID=Cattle_Y_T01432;Parent=Cattle_Y_G00773;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00773;transcript_id=Cattle_Y_T01432;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47570801	47570924	.	-	.	ID=Cattle_Y_T01433;Parent=Cattle_Y_G00773;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00773;transcript_id=Cattle_Y_T01433;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47576146	47578392	.	-	.	ID=Cattle_Y_G00774;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00774;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47576146	47576223	.	-	.	ID=Cattle_Y_T01434;Parent=Cattle_Y_G00774;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00774;transcript_id=Cattle_Y_T01434;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47576340	47576485	.	-	.	ID=Cattle_Y_T01435;Parent=Cattle_Y_G00774;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00774;transcript_id=Cattle_Y_T01435;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47576581	47576692	.	-	.	ID=Cattle_Y_T01436;Parent=Cattle_Y_G00774;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00774;transcript_id=Cattle_Y_T01436;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47576876	47576953	.	-	.	ID=Cattle_Y_T01437;Parent=Cattle_Y_G00774;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00774;transcript_id=Cattle_Y_T01437;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47577757	47578173	.	-	.	ID=Cattle_Y_T01438;Parent=Cattle_Y_G00774;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00774;transcript_id=Cattle_Y_T01438;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47578269	47578392	.	-	.	ID=Cattle_Y_T01439;Parent=Cattle_Y_G00774;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00774;transcript_id=Cattle_Y_T01439;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47591211	47593459	.	-	.	ID=Cattle_Y_G00775;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00775;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47591211	47591288	.	-	.	ID=Cattle_Y_T01440;Parent=Cattle_Y_G00775;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00775;transcript_id=Cattle_Y_T01440;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47591405	47591550	.	-	.	ID=Cattle_Y_T01441;Parent=Cattle_Y_G00775;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00775;transcript_id=Cattle_Y_T01441;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47591646	47591757	.	-	.	ID=Cattle_Y_T01442;Parent=Cattle_Y_G00775;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00775;transcript_id=Cattle_Y_T01442;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47591941	47592018	.	-	.	ID=Cattle_Y_T01443;Parent=Cattle_Y_G00775;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00775;transcript_id=Cattle_Y_T01443;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47592824	47593240	.	-	.	ID=Cattle_Y_T01444;Parent=Cattle_Y_G00775;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00775;transcript_id=Cattle_Y_T01444;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47593336	47593459	.	-	.	ID=Cattle_Y_T01445;Parent=Cattle_Y_G00775;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00775;transcript_id=Cattle_Y_T01445;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47598751	47600999	.	-	.	ID=Cattle_Y_G00776;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00776;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47598751	47598828	.	-	.	ID=Cattle_Y_T01446;Parent=Cattle_Y_G00776;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00776;transcript_id=Cattle_Y_T01446;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47598945	47599090	.	-	.	ID=Cattle_Y_T01447;Parent=Cattle_Y_G00776;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00776;transcript_id=Cattle_Y_T01447;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47599186	47599297	.	-	.	ID=Cattle_Y_T01448;Parent=Cattle_Y_G00776;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00776;transcript_id=Cattle_Y_T01448;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47599481	47599558	.	-	.	ID=Cattle_Y_T01449;Parent=Cattle_Y_G00776;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00776;transcript_id=Cattle_Y_T01449;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47600364	47600779	.	-	.	ID=Cattle_Y_T01450;Parent=Cattle_Y_G00776;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00776;transcript_id=Cattle_Y_T01450;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47600876	47600999	.	-	.	ID=Cattle_Y_T01451;Parent=Cattle_Y_G00776;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00776;transcript_id=Cattle_Y_T01451;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47606221	47608469	.	-	.	ID=Cattle_Y_G00777;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00777;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47606221	47606298	.	-	.	ID=Cattle_Y_T01452;Parent=Cattle_Y_G00777;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00777;transcript_id=Cattle_Y_T01452;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47606415	47606560	.	-	.	ID=Cattle_Y_T01453;Parent=Cattle_Y_G00777;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00777;transcript_id=Cattle_Y_T01453;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47606656	47606767	.	-	.	ID=Cattle_Y_T01454;Parent=Cattle_Y_G00777;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00777;transcript_id=Cattle_Y_T01454;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47606951	47607028	.	-	.	ID=Cattle_Y_T01455;Parent=Cattle_Y_G00777;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00777;transcript_id=Cattle_Y_T01455;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47607834	47608250	.	-	.	ID=Cattle_Y_T01456;Parent=Cattle_Y_G00777;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00777;transcript_id=Cattle_Y_T01456;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47608346	47608469	.	-	.	ID=Cattle_Y_T01457;Parent=Cattle_Y_G00777;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00777;transcript_id=Cattle_Y_T01457;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47613763	47616013	.	-	.	ID=Cattle_Y_G00778;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00778;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47613763	47613840	.	-	.	ID=Cattle_Y_T01458;Parent=Cattle_Y_G00778;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00778;transcript_id=Cattle_Y_T01458;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47613957	47614102	.	-	.	ID=Cattle_Y_T01459;Parent=Cattle_Y_G00778;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00778;transcript_id=Cattle_Y_T01459;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47614198	47614309	.	-	.	ID=Cattle_Y_T01460;Parent=Cattle_Y_G00778;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00778;transcript_id=Cattle_Y_T01460;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47614493	47614570	.	-	.	ID=Cattle_Y_T01461;Parent=Cattle_Y_G00778;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00778;transcript_id=Cattle_Y_T01461;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47615378	47615794	.	-	.	ID=Cattle_Y_T01462;Parent=Cattle_Y_G00778;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00778;transcript_id=Cattle_Y_T01462;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47615890	47616013	.	-	.	ID=Cattle_Y_T01463;Parent=Cattle_Y_G00778;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00778;transcript_id=Cattle_Y_T01463;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47621308	47623556	.	-	.	ID=Cattle_Y_G00779;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00779;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47621308	47621385	.	-	.	ID=Cattle_Y_T01464;Parent=Cattle_Y_G00779;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00779;transcript_id=Cattle_Y_T01464;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47621502	47621647	.	-	.	ID=Cattle_Y_T01465;Parent=Cattle_Y_G00779;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00779;transcript_id=Cattle_Y_T01465;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47621743	47621854	.	-	.	ID=Cattle_Y_T01466;Parent=Cattle_Y_G00779;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00779;transcript_id=Cattle_Y_T01466;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47622038	47622115	.	-	.	ID=Cattle_Y_T01467;Parent=Cattle_Y_G00779;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00779;transcript_id=Cattle_Y_T01467;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47622921	47623337	.	-	.	ID=Cattle_Y_T01468;Parent=Cattle_Y_G00779;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00779;transcript_id=Cattle_Y_T01468;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47623433	47623556	.	-	.	ID=Cattle_Y_T01469;Parent=Cattle_Y_G00779;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00779;transcript_id=Cattle_Y_T01469;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47628848	47631096	.	-	.	ID=Cattle_Y_G00780;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00780;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47628848	47628925	.	-	.	ID=Cattle_Y_T01470;Parent=Cattle_Y_G00780;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00780;transcript_id=Cattle_Y_T01470;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47629042	47629187	.	-	.	ID=Cattle_Y_T01471;Parent=Cattle_Y_G00780;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00780;transcript_id=Cattle_Y_T01471;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47629283	47629394	.	-	.	ID=Cattle_Y_T01472;Parent=Cattle_Y_G00780;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00780;transcript_id=Cattle_Y_T01472;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47629578	47629655	.	-	.	ID=Cattle_Y_T01473;Parent=Cattle_Y_G00780;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00780;transcript_id=Cattle_Y_T01473;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47630461	47630876	.	-	.	ID=Cattle_Y_T01474;Parent=Cattle_Y_G00780;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00780;transcript_id=Cattle_Y_T01474;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47630973	47631096	.	-	.	ID=Cattle_Y_T01475;Parent=Cattle_Y_G00780;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00780;transcript_id=Cattle_Y_T01475;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47636314	47638562	.	-	.	ID=Cattle_Y_G00781;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00781;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47636314	47636391	.	-	.	ID=Cattle_Y_T01476;Parent=Cattle_Y_G00781;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00781;transcript_id=Cattle_Y_T01476;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47636508	47636653	.	-	.	ID=Cattle_Y_T01477;Parent=Cattle_Y_G00781;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00781;transcript_id=Cattle_Y_T01477;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47636749	47636860	.	-	.	ID=Cattle_Y_T01478;Parent=Cattle_Y_G00781;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00781;transcript_id=Cattle_Y_T01478;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47637044	47637121	.	-	.	ID=Cattle_Y_T01479;Parent=Cattle_Y_G00781;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00781;transcript_id=Cattle_Y_T01479;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47637927	47638343	.	-	.	ID=Cattle_Y_T01480;Parent=Cattle_Y_G00781;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00781;transcript_id=Cattle_Y_T01480;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47638439	47638562	.	-	.	ID=Cattle_Y_T01481;Parent=Cattle_Y_G00781;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00781;transcript_id=Cattle_Y_T01481;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47674023	47676275	1653	-	.	ID=Cattle_Y_G00782;Dbxref=GeneID:132344572;Name=LOC132344572;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344572;gene_biotype=protein_coding;gene_id=Cattle_Y_G00782;source_id=gene-LOC132344572
haplotype2-0000357	CAT	mRNA	47674023	47676275	1653	-	.	ID=Cattle_Y_T01482;Parent=Cattle_Y_G00782;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;Name=XM_059884237.1;gbkey=mRNA;gene=LOC132344572;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 7%25 coverage of the annotated genomic feature by RNAseq alignments;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01482;gene_id=Cattle_Y_G00782;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884237.1
haplotype2-0000357	CAT	exon	47674023	47674100	132	-	0	ID=Cattle_Y_E02126;Parent=Cattle_Y_T01482;gene_id=Cattle_Y_G00782;transcript_id=Cattle_Y_T01482;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	47674217	47674362	276	-	2	ID=Cattle_Y_E02127;Parent=Cattle_Y_T01482;gene_id=Cattle_Y_G00782;transcript_id=Cattle_Y_T01482;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	47674458	47674569	202	-	0	ID=Cattle_Y_E02128;Parent=Cattle_Y_T01482;gene_id=Cattle_Y_G00782;transcript_id=Cattle_Y_T01482;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	47674753	47674830	133	-	0	ID=Cattle_Y_E02129;Parent=Cattle_Y_T01482;gene_id=Cattle_Y_G00782;transcript_id=Cattle_Y_T01482;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	47675640	47676055	692	-	2	ID=Cattle_Y_E02130;Parent=Cattle_Y_T01482;gene_id=Cattle_Y_G00782;transcript_id=Cattle_Y_T01482;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	47676152	47676275	218	-	0	ID=Cattle_Y_E02131;Parent=Cattle_Y_T01482;gene_id=Cattle_Y_G00782;transcript_id=Cattle_Y_T01482;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47674023	47674100	132	-	0	ID=Cattle_Y_C01736;Parent=Cattle_Y_T01482;gene_id=Cattle_Y_G00782;transcript_id=Cattle_Y_T01482;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47674217	47674362	276	-	2	ID=Cattle_Y_C01737;Parent=Cattle_Y_T01482;gene_id=Cattle_Y_G00782;transcript_id=Cattle_Y_T01482;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47674458	47674569	202	-	0	ID=Cattle_Y_C01738;Parent=Cattle_Y_T01482;gene_id=Cattle_Y_G00782;transcript_id=Cattle_Y_T01482;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47674753	47674830	133	-	0	ID=Cattle_Y_C01739;Parent=Cattle_Y_T01482;gene_id=Cattle_Y_G00782;transcript_id=Cattle_Y_T01482;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47675640	47676055	692	-	2	ID=Cattle_Y_C01740;Parent=Cattle_Y_T01482;gene_id=Cattle_Y_G00782;transcript_id=Cattle_Y_T01482;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47676152	47676275	218	-	0	ID=Cattle_Y_C01741;Parent=Cattle_Y_T01482;gene_id=Cattle_Y_G00782;transcript_id=Cattle_Y_T01482;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47681569	47683815	.	-	.	ID=Cattle_Y_G00783;Dbxref=GeneID:132344603;Name=LOC132344603;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344603;gene_biotype=protein_coding;gene_id=Cattle_Y_G00783;source_id=gene-LOC132344603
haplotype2-0000357	CAT	mRNA	47681569	47683815	.	-	.	ID=Cattle_Y_T01483;Parent=Cattle_Y_G00783;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;Name=XM_059884269.1;gbkey=mRNA;gene=LOC132344603;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01483;gene_id=Cattle_Y_G00783;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884269.1
haplotype2-0000357	CAT	exon	47681569	47681646	.	-	.	ID=Cattle_Y_E02132;Parent=Cattle_Y_T01483;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01483;gene_id=Cattle_Y_G00783;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-6
haplotype2-0000357	CAT	exon	47681763	47681908	.	-	.	ID=Cattle_Y_E02133;Parent=Cattle_Y_T01483;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01483;gene_id=Cattle_Y_G00783;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-5
haplotype2-0000357	CAT	exon	47682004	47682115	.	-	.	ID=Cattle_Y_E02134;Parent=Cattle_Y_T01483;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01483;gene_id=Cattle_Y_G00783;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-4
haplotype2-0000357	CAT	exon	47682299	47682376	.	-	.	ID=Cattle_Y_E02135;Parent=Cattle_Y_T01483;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01483;gene_id=Cattle_Y_G00783;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-3
haplotype2-0000357	CAT	exon	47683180	47683595	.	-	.	ID=Cattle_Y_E02136;Parent=Cattle_Y_T01483;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01483;gene_id=Cattle_Y_G00783;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-2
haplotype2-0000357	CAT	exon	47683692	47683815	.	-	.	ID=Cattle_Y_E02137;Parent=Cattle_Y_T01483;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01483;gene_id=Cattle_Y_G00783;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-1
haplotype2-0000357	CAT	CDS	47681569	47681646	.	-	0	ID=Cattle_Y_C01742;Parent=Cattle_Y_T01483;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_4;gene_id=Cattle_Y_G00783;transcript_id=Cattle_Y_T01483;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47681763	47681908	.	-	2	ID=Cattle_Y_C01743;Parent=Cattle_Y_T01483;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_4;gene_id=Cattle_Y_G00783;transcript_id=Cattle_Y_T01483;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47682004	47682115	.	-	0	ID=Cattle_Y_C01744;Parent=Cattle_Y_T01483;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_4;gene_id=Cattle_Y_G00783;transcript_id=Cattle_Y_T01483;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47682299	47682376	.	-	0	ID=Cattle_Y_C01745;Parent=Cattle_Y_T01483;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_4;gene_id=Cattle_Y_G00783;transcript_id=Cattle_Y_T01483;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47683180	47683595	.	-	2	ID=Cattle_Y_C01746;Parent=Cattle_Y_T01483;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_4;gene_id=Cattle_Y_G00783;transcript_id=Cattle_Y_T01483;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47683692	47683815	.	-	0	ID=Cattle_Y_C01747;Parent=Cattle_Y_T01483;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_4;gene_id=Cattle_Y_G00783;transcript_id=Cattle_Y_T01483;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47704193	47706443	.	-	.	ID=Cattle_Y_G00784;Dbxref=GeneID:132344603;Name=LOC132344603;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344603;gene_biotype=protein_coding;gene_id=Cattle_Y_G00784;source_id=gene-LOC132344603
haplotype2-0000357	CAT	mRNA	47704193	47706443	.	-	.	ID=Cattle_Y_T01484;Parent=Cattle_Y_G00784;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;Name=XM_059884269.1;gbkey=mRNA;gene=LOC132344603;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01484;gene_id=Cattle_Y_G00784;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884269.1
haplotype2-0000357	CAT	exon	47704193	47704270	.	-	.	ID=Cattle_Y_E02138;Parent=Cattle_Y_T01484;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01484;gene_id=Cattle_Y_G00784;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-6
haplotype2-0000357	CAT	exon	47704387	47704532	.	-	.	ID=Cattle_Y_E02139;Parent=Cattle_Y_T01484;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01484;gene_id=Cattle_Y_G00784;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-5
haplotype2-0000357	CAT	exon	47704628	47704739	.	-	.	ID=Cattle_Y_E02140;Parent=Cattle_Y_T01484;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01484;gene_id=Cattle_Y_G00784;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-4
haplotype2-0000357	CAT	exon	47704923	47705000	.	-	.	ID=Cattle_Y_E02141;Parent=Cattle_Y_T01484;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01484;gene_id=Cattle_Y_G00784;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-3
haplotype2-0000357	CAT	exon	47705808	47706223	.	-	.	ID=Cattle_Y_E02142;Parent=Cattle_Y_T01484;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01484;gene_id=Cattle_Y_G00784;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-2
haplotype2-0000357	CAT	exon	47706320	47706443	.	-	.	ID=Cattle_Y_E02143;Parent=Cattle_Y_T01484;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01484;gene_id=Cattle_Y_G00784;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-1
haplotype2-0000357	CAT	CDS	47704193	47704270	.	-	0	ID=Cattle_Y_C01748;Parent=Cattle_Y_T01484;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_3;gene_id=Cattle_Y_G00784;transcript_id=Cattle_Y_T01484;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47704387	47704532	.	-	2	ID=Cattle_Y_C01749;Parent=Cattle_Y_T01484;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_3;gene_id=Cattle_Y_G00784;transcript_id=Cattle_Y_T01484;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47704628	47704739	.	-	0	ID=Cattle_Y_C01750;Parent=Cattle_Y_T01484;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_3;gene_id=Cattle_Y_G00784;transcript_id=Cattle_Y_T01484;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47704923	47705000	.	-	0	ID=Cattle_Y_C01751;Parent=Cattle_Y_T01484;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_3;gene_id=Cattle_Y_G00784;transcript_id=Cattle_Y_T01484;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47705808	47706223	.	-	2	ID=Cattle_Y_C01752;Parent=Cattle_Y_T01484;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_3;gene_id=Cattle_Y_G00784;transcript_id=Cattle_Y_T01484;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47706320	47706443	.	-	0	ID=Cattle_Y_C01753;Parent=Cattle_Y_T01484;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_3;gene_id=Cattle_Y_G00784;transcript_id=Cattle_Y_T01484;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47711736	47713984	.	-	.	ID=Cattle_Y_G00785;Dbxref=GeneID:132344615;Name=LOC132344615;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344615;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G00785;source_id=gene-LOC132344615
haplotype2-0000357	CAT	exon	47711736	47711813	.	-	.	ID=Cattle_Y_T01485;Parent=Cattle_Y_G00785;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00785;transcript_id=Cattle_Y_T01485;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-6
haplotype2-0000357	CAT	exon	47711930	47712075	.	-	.	ID=Cattle_Y_T01486;Parent=Cattle_Y_G00785;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00785;transcript_id=Cattle_Y_T01486;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-5
haplotype2-0000357	CAT	exon	47712171	47712282	.	-	.	ID=Cattle_Y_T01487;Parent=Cattle_Y_G00785;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00785;transcript_id=Cattle_Y_T01487;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-4
haplotype2-0000357	CAT	exon	47712466	47712543	.	-	.	ID=Cattle_Y_T01488;Parent=Cattle_Y_G00785;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00785;transcript_id=Cattle_Y_T01488;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-3
haplotype2-0000357	CAT	exon	47713349	47713764	.	-	.	ID=Cattle_Y_T01489;Parent=Cattle_Y_G00785;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00785;transcript_id=Cattle_Y_T01489;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615-2
haplotype2-0000357	CAT	exon	47713861	47713984	.	-	.	ID=Cattle_Y_T01490;Parent=Cattle_Y_G00785;Dbxref=GeneID:132344615;gbkey=exon;gene=LOC132344615;model_evidence=Supporting evidence includes similarity to: 1 Protein, and 7%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G00785;transcript_id=Cattle_Y_T01490;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344615
haplotype2-0000357	CAT	gene	47719277	47721529	.	-	.	ID=Cattle_Y_G00786;Dbxref=GeneID:132344603;Name=LOC132344603;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344603;gene_biotype=protein_coding;gene_id=Cattle_Y_G00786;source_id=gene-LOC132344603
haplotype2-0000357	CAT	mRNA	47719277	47721529	.	-	.	ID=Cattle_Y_T01491;Parent=Cattle_Y_G00786;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;Name=XM_059884269.1;gbkey=mRNA;gene=LOC132344603;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01491;gene_id=Cattle_Y_G00786;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884269.1
haplotype2-0000357	CAT	exon	47719277	47719354	.	-	.	ID=Cattle_Y_E02144;Parent=Cattle_Y_T01491;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01491;gene_id=Cattle_Y_G00786;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-6
haplotype2-0000357	CAT	exon	47719471	47719616	.	-	.	ID=Cattle_Y_E02145;Parent=Cattle_Y_T01491;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01491;gene_id=Cattle_Y_G00786;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-5
haplotype2-0000357	CAT	exon	47719712	47719823	.	-	.	ID=Cattle_Y_E02146;Parent=Cattle_Y_T01491;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01491;gene_id=Cattle_Y_G00786;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-4
haplotype2-0000357	CAT	exon	47720007	47720084	.	-	.	ID=Cattle_Y_E02147;Parent=Cattle_Y_T01491;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01491;gene_id=Cattle_Y_G00786;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-3
haplotype2-0000357	CAT	exon	47720894	47721309	.	-	.	ID=Cattle_Y_E02148;Parent=Cattle_Y_T01491;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01491;gene_id=Cattle_Y_G00786;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-2
haplotype2-0000357	CAT	exon	47721406	47721529	.	-	.	ID=Cattle_Y_E02149;Parent=Cattle_Y_T01491;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01491;gene_id=Cattle_Y_G00786;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-1
haplotype2-0000357	CAT	CDS	47719277	47719354	.	-	0	ID=Cattle_Y_C01754;Parent=Cattle_Y_T01491;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_5;gene_id=Cattle_Y_G00786;transcript_id=Cattle_Y_T01491;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47719471	47719616	.	-	2	ID=Cattle_Y_C01755;Parent=Cattle_Y_T01491;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_5;gene_id=Cattle_Y_G00786;transcript_id=Cattle_Y_T01491;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47719712	47719823	.	-	0	ID=Cattle_Y_C01756;Parent=Cattle_Y_T01491;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_5;gene_id=Cattle_Y_G00786;transcript_id=Cattle_Y_T01491;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47720007	47720084	.	-	0	ID=Cattle_Y_C01757;Parent=Cattle_Y_T01491;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_5;gene_id=Cattle_Y_G00786;transcript_id=Cattle_Y_T01491;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47720894	47721309	.	-	2	ID=Cattle_Y_C01758;Parent=Cattle_Y_T01491;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_5;gene_id=Cattle_Y_G00786;transcript_id=Cattle_Y_T01491;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47721406	47721529	.	-	0	ID=Cattle_Y_C01759;Parent=Cattle_Y_T01491;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_5;gene_id=Cattle_Y_G00786;transcript_id=Cattle_Y_T01491;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47726822	47729062	.	-	.	ID=Cattle_Y_G00787;Dbxref=GeneID:132344603;Name=LOC132344603;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344603;gene_biotype=protein_coding;gene_id=Cattle_Y_G00787;source_id=gene-LOC132344603
haplotype2-0000357	CAT	mRNA	47726822	47729062	.	-	.	ID=Cattle_Y_T01492;Parent=Cattle_Y_G00787;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;Name=XM_059884269.1;gbkey=mRNA;gene=LOC132344603;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01492;gene_id=Cattle_Y_G00787;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884269.1
haplotype2-0000357	CAT	exon	47726822	47726899	.	-	.	ID=Cattle_Y_E02150;Parent=Cattle_Y_T01492;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01492;gene_id=Cattle_Y_G00787;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-6
haplotype2-0000357	CAT	exon	47727016	47727161	.	-	.	ID=Cattle_Y_E02151;Parent=Cattle_Y_T01492;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01492;gene_id=Cattle_Y_G00787;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-5
haplotype2-0000357	CAT	exon	47727257	47727368	.	-	.	ID=Cattle_Y_E02152;Parent=Cattle_Y_T01492;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01492;gene_id=Cattle_Y_G00787;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-4
haplotype2-0000357	CAT	exon	47727552	47727629	.	-	.	ID=Cattle_Y_E02153;Parent=Cattle_Y_T01492;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01492;gene_id=Cattle_Y_G00787;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-3
haplotype2-0000357	CAT	exon	47728427	47728842	.	-	.	ID=Cattle_Y_E02154;Parent=Cattle_Y_T01492;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01492;gene_id=Cattle_Y_G00787;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-2
haplotype2-0000357	CAT	exon	47728939	47729062	.	-	.	ID=Cattle_Y_E02155;Parent=Cattle_Y_T01492;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01492;gene_id=Cattle_Y_G00787;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-1
haplotype2-0000357	CAT	CDS	47726822	47726899	.	-	0	ID=Cattle_Y_C01760;Parent=Cattle_Y_T01492;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_1;gene_id=Cattle_Y_G00787;transcript_id=Cattle_Y_T01492;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47727016	47727161	.	-	2	ID=Cattle_Y_C01761;Parent=Cattle_Y_T01492;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_1;gene_id=Cattle_Y_G00787;transcript_id=Cattle_Y_T01492;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47727257	47727368	.	-	0	ID=Cattle_Y_C01762;Parent=Cattle_Y_T01492;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_1;gene_id=Cattle_Y_G00787;transcript_id=Cattle_Y_T01492;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47727552	47727629	.	-	0	ID=Cattle_Y_C01763;Parent=Cattle_Y_T01492;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_1;gene_id=Cattle_Y_G00787;transcript_id=Cattle_Y_T01492;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47728427	47728842	.	-	2	ID=Cattle_Y_C01764;Parent=Cattle_Y_T01492;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_1;gene_id=Cattle_Y_G00787;transcript_id=Cattle_Y_T01492;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47728939	47729062	.	-	0	ID=Cattle_Y_C01765;Parent=Cattle_Y_T01492;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_1;gene_id=Cattle_Y_G00787;transcript_id=Cattle_Y_T01492;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47734354	47736594	.	-	.	ID=Cattle_Y_G00788;Dbxref=GeneID:132344603;Name=LOC132344603;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344603;gene_biotype=protein_coding;gene_id=Cattle_Y_G00788;source_id=gene-LOC132344603
haplotype2-0000357	CAT	mRNA	47734354	47736594	.	-	.	ID=Cattle_Y_T01493;Parent=Cattle_Y_G00788;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;Name=XM_059884269.1;gbkey=mRNA;gene=LOC132344603;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01493;gene_id=Cattle_Y_G00788;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884269.1
haplotype2-0000357	CAT	exon	47734354	47734431	.	-	.	ID=Cattle_Y_E02156;Parent=Cattle_Y_T01493;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01493;gene_id=Cattle_Y_G00788;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-6
haplotype2-0000357	CAT	exon	47734548	47734693	.	-	.	ID=Cattle_Y_E02157;Parent=Cattle_Y_T01493;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01493;gene_id=Cattle_Y_G00788;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-5
haplotype2-0000357	CAT	exon	47734789	47734900	.	-	.	ID=Cattle_Y_E02158;Parent=Cattle_Y_T01493;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01493;gene_id=Cattle_Y_G00788;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-4
haplotype2-0000357	CAT	exon	47735084	47735161	.	-	.	ID=Cattle_Y_E02159;Parent=Cattle_Y_T01493;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01493;gene_id=Cattle_Y_G00788;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-3
haplotype2-0000357	CAT	exon	47735959	47736374	.	-	.	ID=Cattle_Y_E02160;Parent=Cattle_Y_T01493;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01493;gene_id=Cattle_Y_G00788;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-2
haplotype2-0000357	CAT	exon	47736471	47736594	.	-	.	ID=Cattle_Y_E02161;Parent=Cattle_Y_T01493;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01493;gene_id=Cattle_Y_G00788;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-1
haplotype2-0000357	CAT	CDS	47734354	47734431	.	-	0	ID=Cattle_Y_C01766;Parent=Cattle_Y_T01493;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_2;gene_id=Cattle_Y_G00788;transcript_id=Cattle_Y_T01493;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47734548	47734693	.	-	2	ID=Cattle_Y_C01767;Parent=Cattle_Y_T01493;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_2;gene_id=Cattle_Y_G00788;transcript_id=Cattle_Y_T01493;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47734789	47734900	.	-	0	ID=Cattle_Y_C01768;Parent=Cattle_Y_T01493;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_2;gene_id=Cattle_Y_G00788;transcript_id=Cattle_Y_T01493;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47735084	47735161	.	-	0	ID=Cattle_Y_C01769;Parent=Cattle_Y_T01493;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_2;gene_id=Cattle_Y_G00788;transcript_id=Cattle_Y_T01493;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47735959	47736374	.	-	2	ID=Cattle_Y_C01770;Parent=Cattle_Y_T01493;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_2;gene_id=Cattle_Y_G00788;transcript_id=Cattle_Y_T01493;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47736471	47736594	.	-	0	ID=Cattle_Y_C01771;Parent=Cattle_Y_T01493;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_2;gene_id=Cattle_Y_G00788;transcript_id=Cattle_Y_T01493;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47741887	47744125	.	-	.	ID=Cattle_Y_G00789;Dbxref=GeneID:132344603;Name=LOC132344603;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344603;gene_biotype=protein_coding;gene_id=Cattle_Y_G00789;source_id=gene-LOC132344603
haplotype2-0000357	CAT	mRNA	47741887	47744125	.	-	.	ID=Cattle_Y_T01494;Parent=Cattle_Y_G00789;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;Name=XM_059884269.1;gbkey=mRNA;gene=LOC132344603;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01494;gene_id=Cattle_Y_G00789;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884269.1
haplotype2-0000357	CAT	exon	47741887	47741964	.	-	.	ID=Cattle_Y_E02162;Parent=Cattle_Y_T01494;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01494;gene_id=Cattle_Y_G00789;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-6
haplotype2-0000357	CAT	exon	47742081	47742226	.	-	.	ID=Cattle_Y_E02163;Parent=Cattle_Y_T01494;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01494;gene_id=Cattle_Y_G00789;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-5
haplotype2-0000357	CAT	exon	47742322	47742433	.	-	.	ID=Cattle_Y_E02164;Parent=Cattle_Y_T01494;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01494;gene_id=Cattle_Y_G00789;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-4
haplotype2-0000357	CAT	exon	47742617	47742694	.	-	.	ID=Cattle_Y_E02165;Parent=Cattle_Y_T01494;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01494;gene_id=Cattle_Y_G00789;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-3
haplotype2-0000357	CAT	exon	47743490	47743905	.	-	.	ID=Cattle_Y_E02166;Parent=Cattle_Y_T01494;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01494;gene_id=Cattle_Y_G00789;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-2
haplotype2-0000357	CAT	exon	47744002	47744125	.	-	.	ID=Cattle_Y_E02167;Parent=Cattle_Y_T01494;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01494;gene_id=Cattle_Y_G00789;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-1
haplotype2-0000357	CAT	CDS	47741887	47741964	.	-	0	ID=Cattle_Y_C01772;Parent=Cattle_Y_T01494;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1;gene_id=Cattle_Y_G00789;transcript_id=Cattle_Y_T01494;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47742081	47742226	.	-	2	ID=Cattle_Y_C01773;Parent=Cattle_Y_T01494;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1;gene_id=Cattle_Y_G00789;transcript_id=Cattle_Y_T01494;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47742322	47742433	.	-	0	ID=Cattle_Y_C01774;Parent=Cattle_Y_T01494;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1;gene_id=Cattle_Y_G00789;transcript_id=Cattle_Y_T01494;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47742617	47742694	.	-	0	ID=Cattle_Y_C01775;Parent=Cattle_Y_T01494;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1;gene_id=Cattle_Y_G00789;transcript_id=Cattle_Y_T01494;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47743490	47743905	.	-	2	ID=Cattle_Y_C01776;Parent=Cattle_Y_T01494;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1;gene_id=Cattle_Y_G00789;transcript_id=Cattle_Y_T01494;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47744002	47744125	.	-	0	ID=Cattle_Y_C01777;Parent=Cattle_Y_T01494;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1;gene_id=Cattle_Y_G00789;transcript_id=Cattle_Y_T01494;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47749418	47751656	.	-	.	ID=Cattle_Y_G00790;Dbxref=GeneID:132344603;Name=LOC132344603;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344603;gene_biotype=protein_coding;gene_id=Cattle_Y_G00790;source_id=gene-LOC132344603
haplotype2-0000357	CAT	mRNA	47749418	47751656	.	-	.	ID=Cattle_Y_T01495;Parent=Cattle_Y_G00790;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;Name=XM_059884269.1;gbkey=mRNA;gene=LOC132344603;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01495;gene_id=Cattle_Y_G00790;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884269.1
haplotype2-0000357	CAT	exon	47749418	47749495	.	-	.	ID=Cattle_Y_E02168;Parent=Cattle_Y_T01495;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01495;gene_id=Cattle_Y_G00790;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-6
haplotype2-0000357	CAT	exon	47749612	47749757	.	-	.	ID=Cattle_Y_E02169;Parent=Cattle_Y_T01495;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01495;gene_id=Cattle_Y_G00790;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-5
haplotype2-0000357	CAT	exon	47749853	47749964	.	-	.	ID=Cattle_Y_E02170;Parent=Cattle_Y_T01495;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01495;gene_id=Cattle_Y_G00790;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-4
haplotype2-0000357	CAT	exon	47750148	47750225	.	-	.	ID=Cattle_Y_E02171;Parent=Cattle_Y_T01495;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01495;gene_id=Cattle_Y_G00790;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-3
haplotype2-0000357	CAT	exon	47751021	47751436	.	-	.	ID=Cattle_Y_E02172;Parent=Cattle_Y_T01495;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01495;gene_id=Cattle_Y_G00790;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-2
haplotype2-0000357	CAT	exon	47751533	47751656	.	-	.	ID=Cattle_Y_E02173;Parent=Cattle_Y_T01495;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01495;gene_id=Cattle_Y_G00790;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-1
haplotype2-0000357	CAT	CDS	47749418	47749495	.	-	0	ID=Cattle_Y_C01778;Parent=Cattle_Y_T01495;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_7;gene_id=Cattle_Y_G00790;transcript_id=Cattle_Y_T01495;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47749612	47749757	.	-	2	ID=Cattle_Y_C01779;Parent=Cattle_Y_T01495;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_7;gene_id=Cattle_Y_G00790;transcript_id=Cattle_Y_T01495;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47749853	47749964	.	-	0	ID=Cattle_Y_C01780;Parent=Cattle_Y_T01495;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_7;gene_id=Cattle_Y_G00790;transcript_id=Cattle_Y_T01495;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47750148	47750225	.	-	0	ID=Cattle_Y_C01781;Parent=Cattle_Y_T01495;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_7;gene_id=Cattle_Y_G00790;transcript_id=Cattle_Y_T01495;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47751021	47751436	.	-	2	ID=Cattle_Y_C01782;Parent=Cattle_Y_T01495;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_7;gene_id=Cattle_Y_G00790;transcript_id=Cattle_Y_T01495;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47751533	47751656	.	-	0	ID=Cattle_Y_C01783;Parent=Cattle_Y_T01495;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_7;gene_id=Cattle_Y_G00790;transcript_id=Cattle_Y_T01495;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47779556	47781794	.	-	.	ID=Cattle_Y_G00791;Dbxref=GeneID:132344603;Name=LOC132344603;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344603;gene_biotype=protein_coding;gene_id=Cattle_Y_G00791;source_id=gene-LOC132344603
haplotype2-0000357	CAT	mRNA	47779556	47781794	.	-	.	ID=Cattle_Y_T01496;Parent=Cattle_Y_G00791;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;Name=XM_059884269.1;gbkey=mRNA;gene=LOC132344603;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01496;gene_id=Cattle_Y_G00791;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884269.1
haplotype2-0000357	CAT	exon	47779556	47779633	.	-	.	ID=Cattle_Y_E02174;Parent=Cattle_Y_T01496;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01496;gene_id=Cattle_Y_G00791;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-6
haplotype2-0000357	CAT	exon	47779750	47779895	.	-	.	ID=Cattle_Y_E02175;Parent=Cattle_Y_T01496;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01496;gene_id=Cattle_Y_G00791;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-5
haplotype2-0000357	CAT	exon	47779991	47780102	.	-	.	ID=Cattle_Y_E02176;Parent=Cattle_Y_T01496;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01496;gene_id=Cattle_Y_G00791;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-4
haplotype2-0000357	CAT	exon	47780286	47780363	.	-	.	ID=Cattle_Y_E02177;Parent=Cattle_Y_T01496;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01496;gene_id=Cattle_Y_G00791;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-3
haplotype2-0000357	CAT	exon	47781159	47781574	.	-	.	ID=Cattle_Y_E02178;Parent=Cattle_Y_T01496;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01496;gene_id=Cattle_Y_G00791;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-2
haplotype2-0000357	CAT	exon	47781671	47781794	.	-	.	ID=Cattle_Y_E02179;Parent=Cattle_Y_T01496;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01496;gene_id=Cattle_Y_G00791;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-1
haplotype2-0000357	CAT	CDS	47779556	47779633	.	-	0	ID=Cattle_Y_C01784;Parent=Cattle_Y_T01496;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_6;gene_id=Cattle_Y_G00791;transcript_id=Cattle_Y_T01496;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47779750	47779895	.	-	2	ID=Cattle_Y_C01785;Parent=Cattle_Y_T01496;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_6;gene_id=Cattle_Y_G00791;transcript_id=Cattle_Y_T01496;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47779991	47780102	.	-	0	ID=Cattle_Y_C01786;Parent=Cattle_Y_T01496;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_6;gene_id=Cattle_Y_G00791;transcript_id=Cattle_Y_T01496;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47780286	47780363	.	-	0	ID=Cattle_Y_C01787;Parent=Cattle_Y_T01496;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_6;gene_id=Cattle_Y_G00791;transcript_id=Cattle_Y_T01496;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47781159	47781574	.	-	2	ID=Cattle_Y_C01788;Parent=Cattle_Y_T01496;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_6;gene_id=Cattle_Y_G00791;transcript_id=Cattle_Y_T01496;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47781671	47781794	.	-	0	ID=Cattle_Y_C01789;Parent=Cattle_Y_T01496;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_6;gene_id=Cattle_Y_G00791;transcript_id=Cattle_Y_T01496;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47802160	47804406	.	-	.	ID=Cattle_Y_G00792;Dbxref=GeneID:132344603;Name=LOC132344603;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344603;gene_biotype=protein_coding;gene_id=Cattle_Y_G00792;source_id=gene-LOC132344603
haplotype2-0000357	CAT	mRNA	47802160	47804406	.	-	.	ID=Cattle_Y_T01497;Parent=Cattle_Y_G00792;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;Name=XM_059884269.1;gbkey=mRNA;gene=LOC132344603;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01497;gene_id=Cattle_Y_G00792;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884269.1
haplotype2-0000357	CAT	exon	47802160	47802237	.	-	.	ID=Cattle_Y_E02180;Parent=Cattle_Y_T01497;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01497;gene_id=Cattle_Y_G00792;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-6
haplotype2-0000357	CAT	exon	47802354	47802499	.	-	.	ID=Cattle_Y_E02181;Parent=Cattle_Y_T01497;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01497;gene_id=Cattle_Y_G00792;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-5
haplotype2-0000357	CAT	exon	47802595	47802706	.	-	.	ID=Cattle_Y_E02182;Parent=Cattle_Y_T01497;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01497;gene_id=Cattle_Y_G00792;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-4
haplotype2-0000357	CAT	exon	47802890	47802967	.	-	.	ID=Cattle_Y_E02183;Parent=Cattle_Y_T01497;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01497;gene_id=Cattle_Y_G00792;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-3
haplotype2-0000357	CAT	exon	47803771	47804186	.	-	.	ID=Cattle_Y_E02184;Parent=Cattle_Y_T01497;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01497;gene_id=Cattle_Y_G00792;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-2
haplotype2-0000357	CAT	exon	47804283	47804406	.	-	.	ID=Cattle_Y_E02185;Parent=Cattle_Y_T01497;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;gbkey=mRNA;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01497;gene_id=Cattle_Y_G00792;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884269.1-1
haplotype2-0000357	CAT	CDS	47802160	47802237	.	-	0	ID=Cattle_Y_C01790;Parent=Cattle_Y_T01497;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_8;gene_id=Cattle_Y_G00792;transcript_id=Cattle_Y_T01497;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47802354	47802499	.	-	2	ID=Cattle_Y_C01791;Parent=Cattle_Y_T01497;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_8;gene_id=Cattle_Y_G00792;transcript_id=Cattle_Y_T01497;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47802595	47802706	.	-	0	ID=Cattle_Y_C01792;Parent=Cattle_Y_T01497;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_8;gene_id=Cattle_Y_G00792;transcript_id=Cattle_Y_T01497;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47802890	47802967	.	-	0	ID=Cattle_Y_C01793;Parent=Cattle_Y_T01497;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_8;gene_id=Cattle_Y_G00792;transcript_id=Cattle_Y_T01497;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47803771	47804186	.	-	2	ID=Cattle_Y_C01794;Parent=Cattle_Y_T01497;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_8;gene_id=Cattle_Y_G00792;transcript_id=Cattle_Y_T01497;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47804283	47804406	.	-	0	ID=Cattle_Y_C01795;Parent=Cattle_Y_T01497;Dbxref=GeneID:132344603,GenBank:XP_059740252.1;Name=XP_059740252.1;gbkey=CDS;gene=LOC132344603;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740252.1_8;gene_id=Cattle_Y_G00792;transcript_id=Cattle_Y_T01497;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47809694	47811832	.	-	.	ID=Cattle_Y_G00793;Dbxref=GeneID:132344587;Name=LOC132344587;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344587;gene_biotype=protein_coding;partial=true;start_range=.,9435132;gene_id=Cattle_Y_G00793;source_id=gene-LOC132344587
haplotype2-0000357	CAT	mRNA	47809694	47811832	.	-	.	ID=Cattle_Y_T01498;Parent=Cattle_Y_G00793;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;Name=XM_059884253.1;gbkey=mRNA;gene=LOC132344587;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9435132;transcript_id=Cattle_Y_T01498;gene_id=Cattle_Y_G00793;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884253.1
haplotype2-0000357	CAT	exon	47809694	47809771	.	-	.	ID=Cattle_Y_E02186;Parent=Cattle_Y_T01498;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01498;gene_id=Cattle_Y_G00793;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-6
haplotype2-0000357	CAT	exon	47809888	47810033	.	-	.	ID=Cattle_Y_E02187;Parent=Cattle_Y_T01498;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01498;gene_id=Cattle_Y_G00793;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-5
haplotype2-0000357	CAT	exon	47810129	47810240	.	-	.	ID=Cattle_Y_E02188;Parent=Cattle_Y_T01498;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01498;gene_id=Cattle_Y_G00793;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-4
haplotype2-0000357	CAT	exon	47810424	47810501	.	-	.	ID=Cattle_Y_E02189;Parent=Cattle_Y_T01498;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01498;gene_id=Cattle_Y_G00793;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-3
haplotype2-0000357	CAT	exon	47811305	47811720	.	-	.	ID=Cattle_Y_E02190;Parent=Cattle_Y_T01498;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01498;gene_id=Cattle_Y_G00793;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-2
haplotype2-0000357	CAT	exon	47811817	47811832	.	-	.	ID=Cattle_Y_E02191;Parent=Cattle_Y_T01498;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9435132;transcript_id=Cattle_Y_T01498;gene_id=Cattle_Y_G00793;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-1
haplotype2-0000357	CAT	CDS	47809694	47809771	.	-	0	ID=Cattle_Y_C01796;Parent=Cattle_Y_T01498;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_3;gene_id=Cattle_Y_G00793;transcript_id=Cattle_Y_T01498;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47809888	47810033	.	-	2	ID=Cattle_Y_C01797;Parent=Cattle_Y_T01498;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_3;gene_id=Cattle_Y_G00793;transcript_id=Cattle_Y_T01498;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47810129	47810240	.	-	0	ID=Cattle_Y_C01798;Parent=Cattle_Y_T01498;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_3;gene_id=Cattle_Y_G00793;transcript_id=Cattle_Y_T01498;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47810424	47810501	.	-	0	ID=Cattle_Y_C01799;Parent=Cattle_Y_T01498;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_3;gene_id=Cattle_Y_G00793;transcript_id=Cattle_Y_T01498;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47811305	47811720	.	-	2	ID=Cattle_Y_C01800;Parent=Cattle_Y_T01498;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_3;gene_id=Cattle_Y_G00793;transcript_id=Cattle_Y_T01498;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47811817	47811832	.	-	0	ID=Cattle_Y_C01801;Parent=Cattle_Y_T01498;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_3;start_range=.,9435132;gene_id=Cattle_Y_G00793;transcript_id=Cattle_Y_T01498;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47817231	47819369	.	-	.	ID=Cattle_Y_G00794;Dbxref=GeneID:132344587;Name=LOC132344587;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344587;gene_biotype=protein_coding;partial=true;start_range=.,9435132;gene_id=Cattle_Y_G00794;source_id=gene-LOC132344587
haplotype2-0000357	CAT	mRNA	47817231	47819369	.	-	.	ID=Cattle_Y_T01499;Parent=Cattle_Y_G00794;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;Name=XM_059884253.1;gbkey=mRNA;gene=LOC132344587;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9435132;transcript_id=Cattle_Y_T01499;gene_id=Cattle_Y_G00794;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884253.1
haplotype2-0000357	CAT	exon	47817231	47817308	.	-	.	ID=Cattle_Y_E02192;Parent=Cattle_Y_T01499;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01499;gene_id=Cattle_Y_G00794;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-6
haplotype2-0000357	CAT	exon	47817425	47817570	.	-	.	ID=Cattle_Y_E02193;Parent=Cattle_Y_T01499;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01499;gene_id=Cattle_Y_G00794;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-5
haplotype2-0000357	CAT	exon	47817666	47817777	.	-	.	ID=Cattle_Y_E02194;Parent=Cattle_Y_T01499;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01499;gene_id=Cattle_Y_G00794;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-4
haplotype2-0000357	CAT	exon	47817961	47818038	.	-	.	ID=Cattle_Y_E02195;Parent=Cattle_Y_T01499;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01499;gene_id=Cattle_Y_G00794;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-3
haplotype2-0000357	CAT	exon	47818842	47819257	.	-	.	ID=Cattle_Y_E02196;Parent=Cattle_Y_T01499;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01499;gene_id=Cattle_Y_G00794;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-2
haplotype2-0000357	CAT	exon	47819354	47819369	.	-	.	ID=Cattle_Y_E02197;Parent=Cattle_Y_T01499;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9435132;transcript_id=Cattle_Y_T01499;gene_id=Cattle_Y_G00794;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-1
haplotype2-0000357	CAT	CDS	47817231	47817308	.	-	0	ID=Cattle_Y_C01802;Parent=Cattle_Y_T01499;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_5;gene_id=Cattle_Y_G00794;transcript_id=Cattle_Y_T01499;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47817425	47817570	.	-	2	ID=Cattle_Y_C01803;Parent=Cattle_Y_T01499;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_5;gene_id=Cattle_Y_G00794;transcript_id=Cattle_Y_T01499;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47817666	47817777	.	-	0	ID=Cattle_Y_C01804;Parent=Cattle_Y_T01499;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_5;gene_id=Cattle_Y_G00794;transcript_id=Cattle_Y_T01499;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47817961	47818038	.	-	0	ID=Cattle_Y_C01805;Parent=Cattle_Y_T01499;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_5;gene_id=Cattle_Y_G00794;transcript_id=Cattle_Y_T01499;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47818842	47819257	.	-	2	ID=Cattle_Y_C01806;Parent=Cattle_Y_T01499;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_5;gene_id=Cattle_Y_G00794;transcript_id=Cattle_Y_T01499;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47819354	47819369	.	-	0	ID=Cattle_Y_C01807;Parent=Cattle_Y_T01499;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_5;start_range=.,9435132;gene_id=Cattle_Y_G00794;transcript_id=Cattle_Y_T01499;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47832311	47834557	.	-	.	ID=Cattle_Y_G00795;Dbxref=GeneID:132344601;Name=LOC132344601;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344601;gene_biotype=protein_coding;gene_id=Cattle_Y_G00795;source_id=gene-LOC132344601
haplotype2-0000357	CAT	mRNA	47832311	47834557	.	-	.	ID=Cattle_Y_T01500;Parent=Cattle_Y_G00795;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;Name=XM_059884267.1;gbkey=mRNA;gene=LOC132344601;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01500;gene_id=Cattle_Y_G00795;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884267.1
haplotype2-0000357	CAT	exon	47832311	47832388	.	-	.	ID=Cattle_Y_E02198;Parent=Cattle_Y_T01500;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01500;gene_id=Cattle_Y_G00795;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-6
haplotype2-0000357	CAT	exon	47832505	47832650	.	-	.	ID=Cattle_Y_E02199;Parent=Cattle_Y_T01500;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01500;gene_id=Cattle_Y_G00795;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-6
haplotype2-0000357	CAT	exon	47832746	47832857	.	-	.	ID=Cattle_Y_E02200;Parent=Cattle_Y_T01500;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01500;gene_id=Cattle_Y_G00795;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-6
haplotype2-0000357	CAT	exon	47833041	47833118	.	-	.	ID=Cattle_Y_E02201;Parent=Cattle_Y_T01500;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01500;gene_id=Cattle_Y_G00795;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-6
haplotype2-0000357	CAT	exon	47833922	47834337	.	-	.	ID=Cattle_Y_E02202;Parent=Cattle_Y_T01500;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01500;gene_id=Cattle_Y_G00795;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-6
haplotype2-0000357	CAT	exon	47834434	47834557	.	-	.	ID=Cattle_Y_E02203;Parent=Cattle_Y_T01500;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01500;gene_id=Cattle_Y_G00795;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-1
haplotype2-0000357	CAT	CDS	47832311	47832388	.	-	0	ID=Cattle_Y_C01808;Parent=Cattle_Y_T01500;gene_id=Cattle_Y_G00795;transcript_id=Cattle_Y_T01500;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47832505	47832650	.	-	2	ID=Cattle_Y_C01809;Parent=Cattle_Y_T01500;gene_id=Cattle_Y_G00795;transcript_id=Cattle_Y_T01500;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47832746	47832857	.	-	0	ID=Cattle_Y_C01810;Parent=Cattle_Y_T01500;gene_id=Cattle_Y_G00795;transcript_id=Cattle_Y_T01500;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47833041	47833118	.	-	0	ID=Cattle_Y_C01811;Parent=Cattle_Y_T01500;gene_id=Cattle_Y_G00795;transcript_id=Cattle_Y_T01500;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47833922	47834337	.	-	2	ID=Cattle_Y_C01812;Parent=Cattle_Y_T01500;gene_id=Cattle_Y_G00795;transcript_id=Cattle_Y_T01500;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47834434	47834557	.	-	0	ID=Cattle_Y_C01813;Parent=Cattle_Y_T01500;gene_id=Cattle_Y_G00795;transcript_id=Cattle_Y_T01500;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47839851	47842097	.	-	.	ID=Cattle_Y_G00796;Dbxref=GeneID:132344604;Name=LOC132344604;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344604;gene_biotype=protein_coding;gene_id=Cattle_Y_G00796;source_id=gene-LOC132344604
haplotype2-0000357	CAT	mRNA	47839851	47842097	.	-	.	ID=Cattle_Y_T01501;Parent=Cattle_Y_G00796;Dbxref=GeneID:132344604,GenBank:XM_059884270.1;Name=XM_059884270.1;gbkey=mRNA;gene=LOC132344604;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01501;gene_id=Cattle_Y_G00796;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884270.1
haplotype2-0000357	CAT	exon	47839851	47839928	.	-	.	ID=Cattle_Y_E02204;Parent=Cattle_Y_T01501;Dbxref=GeneID:132344604,GenBank:XM_059884270.1;gbkey=mRNA;gene=LOC132344604;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01501;gene_id=Cattle_Y_G00796;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884270.1-6
haplotype2-0000357	CAT	exon	47840045	47840190	.	-	.	ID=Cattle_Y_E02205;Parent=Cattle_Y_T01501;Dbxref=GeneID:132344604,GenBank:XM_059884270.1;gbkey=mRNA;gene=LOC132344604;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01501;gene_id=Cattle_Y_G00796;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884270.1-5
haplotype2-0000357	CAT	exon	47840286	47840397	.	-	.	ID=Cattle_Y_E02206;Parent=Cattle_Y_T01501;Dbxref=GeneID:132344604,GenBank:XM_059884270.1;gbkey=mRNA;gene=LOC132344604;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01501;gene_id=Cattle_Y_G00796;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884270.1-4
haplotype2-0000357	CAT	exon	47840581	47840658	.	-	.	ID=Cattle_Y_E02207;Parent=Cattle_Y_T01501;Dbxref=GeneID:132344604,GenBank:XM_059884270.1;gbkey=mRNA;gene=LOC132344604;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01501;gene_id=Cattle_Y_G00796;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884270.1-3
haplotype2-0000357	CAT	exon	47841462	47841877	.	-	.	ID=Cattle_Y_E02208;Parent=Cattle_Y_T01501;Dbxref=GeneID:132344604,GenBank:XM_059884270.1;gbkey=mRNA;gene=LOC132344604;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01501;gene_id=Cattle_Y_G00796;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884270.1-2
haplotype2-0000357	CAT	exon	47841974	47842097	.	-	.	ID=Cattle_Y_E02209;Parent=Cattle_Y_T01501;Dbxref=GeneID:132344604,GenBank:XM_059884270.1;gbkey=mRNA;gene=LOC132344604;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01501;gene_id=Cattle_Y_G00796;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884270.1-1
haplotype2-0000357	CAT	CDS	47839851	47839928	.	-	0	ID=Cattle_Y_C01814;Parent=Cattle_Y_T01501;Dbxref=GeneID:132344604,GenBank:XP_059740253.1;Name=XP_059740253.1;gbkey=CDS;gene=LOC132344604;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740253.1;gene_id=Cattle_Y_G00796;transcript_id=Cattle_Y_T01501;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47840045	47840190	.	-	2	ID=Cattle_Y_C01815;Parent=Cattle_Y_T01501;Dbxref=GeneID:132344604,GenBank:XP_059740253.1;Name=XP_059740253.1;gbkey=CDS;gene=LOC132344604;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740253.1;gene_id=Cattle_Y_G00796;transcript_id=Cattle_Y_T01501;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47840286	47840397	.	-	0	ID=Cattle_Y_C01816;Parent=Cattle_Y_T01501;Dbxref=GeneID:132344604,GenBank:XP_059740253.1;Name=XP_059740253.1;gbkey=CDS;gene=LOC132344604;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740253.1;gene_id=Cattle_Y_G00796;transcript_id=Cattle_Y_T01501;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47840581	47840658	.	-	0	ID=Cattle_Y_C01817;Parent=Cattle_Y_T01501;Dbxref=GeneID:132344604,GenBank:XP_059740253.1;Name=XP_059740253.1;gbkey=CDS;gene=LOC132344604;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740253.1;gene_id=Cattle_Y_G00796;transcript_id=Cattle_Y_T01501;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47841462	47841877	.	-	2	ID=Cattle_Y_C01818;Parent=Cattle_Y_T01501;Dbxref=GeneID:132344604,GenBank:XP_059740253.1;Name=XP_059740253.1;gbkey=CDS;gene=LOC132344604;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740253.1;gene_id=Cattle_Y_G00796;transcript_id=Cattle_Y_T01501;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47841974	47842097	.	-	0	ID=Cattle_Y_C01819;Parent=Cattle_Y_T01501;Dbxref=GeneID:132344604,GenBank:XP_059740253.1;Name=XP_059740253.1;gbkey=CDS;gene=LOC132344604;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740253.1;gene_id=Cattle_Y_G00796;transcript_id=Cattle_Y_T01501;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47847388	47849634	.	-	.	ID=Cattle_Y_G00797;Dbxref=GeneID:132344605;Name=LOC132344605;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344605;gene_biotype=protein_coding;gene_id=Cattle_Y_G00797;source_id=gene-LOC132344605
haplotype2-0000357	CAT	mRNA	47847388	47849634	.	-	.	ID=Cattle_Y_T01502;Parent=Cattle_Y_G00797;Dbxref=GeneID:132344605,GenBank:XM_059884271.1;Name=XM_059884271.1;gbkey=mRNA;gene=LOC132344605;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01502;gene_id=Cattle_Y_G00797;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884271.1
haplotype2-0000357	CAT	exon	47847388	47847465	.	-	.	ID=Cattle_Y_E02210;Parent=Cattle_Y_T01502;Dbxref=GeneID:132344605,GenBank:XM_059884271.1;gbkey=mRNA;gene=LOC132344605;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01502;gene_id=Cattle_Y_G00797;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884271.1-6
haplotype2-0000357	CAT	exon	47847582	47847727	.	-	.	ID=Cattle_Y_E02211;Parent=Cattle_Y_T01502;Dbxref=GeneID:132344605,GenBank:XM_059884271.1;gbkey=mRNA;gene=LOC132344605;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01502;gene_id=Cattle_Y_G00797;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884271.1-6
haplotype2-0000357	CAT	exon	47847823	47847934	.	-	.	ID=Cattle_Y_E02212;Parent=Cattle_Y_T01502;Dbxref=GeneID:132344605,GenBank:XM_059884271.1;gbkey=mRNA;gene=LOC132344605;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01502;gene_id=Cattle_Y_G00797;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884271.1-6
haplotype2-0000357	CAT	exon	47848118	47848195	.	-	.	ID=Cattle_Y_E02213;Parent=Cattle_Y_T01502;Dbxref=GeneID:132344605,GenBank:XM_059884271.1;gbkey=mRNA;gene=LOC132344605;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01502;gene_id=Cattle_Y_G00797;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884271.1-6
haplotype2-0000357	CAT	exon	47848999	47849414	.	-	.	ID=Cattle_Y_E02214;Parent=Cattle_Y_T01502;Dbxref=GeneID:132344605,GenBank:XM_059884271.1;gbkey=mRNA;gene=LOC132344605;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01502;gene_id=Cattle_Y_G00797;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884271.1-6
haplotype2-0000357	CAT	exon	47849511	47849634	.	-	.	ID=Cattle_Y_E02215;Parent=Cattle_Y_T01502;Dbxref=GeneID:132344605,GenBank:XM_059884271.1;gbkey=mRNA;gene=LOC132344605;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01502;gene_id=Cattle_Y_G00797;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884271.1-1
haplotype2-0000357	CAT	CDS	47847388	47847465	.	-	0	ID=Cattle_Y_C01820;Parent=Cattle_Y_T01502;gene_id=Cattle_Y_G00797;transcript_id=Cattle_Y_T01502;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47847582	47847727	.	-	2	ID=Cattle_Y_C01821;Parent=Cattle_Y_T01502;gene_id=Cattle_Y_G00797;transcript_id=Cattle_Y_T01502;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47847823	47847934	.	-	0	ID=Cattle_Y_C01822;Parent=Cattle_Y_T01502;gene_id=Cattle_Y_G00797;transcript_id=Cattle_Y_T01502;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47848118	47848195	.	-	0	ID=Cattle_Y_C01823;Parent=Cattle_Y_T01502;gene_id=Cattle_Y_G00797;transcript_id=Cattle_Y_T01502;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47848999	47849414	.	-	2	ID=Cattle_Y_C01824;Parent=Cattle_Y_T01502;gene_id=Cattle_Y_G00797;transcript_id=Cattle_Y_T01502;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47849511	47849634	.	-	0	ID=Cattle_Y_C01825;Parent=Cattle_Y_T01502;gene_id=Cattle_Y_G00797;transcript_id=Cattle_Y_T01502;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47854929	47857175	.	-	.	ID=Cattle_Y_G00798;Dbxref=GeneID:132344611;Name=LOC132344611;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344611;gene_biotype=protein_coding;gene_id=Cattle_Y_G00798;source_id=gene-LOC132344611
haplotype2-0000357	CAT	mRNA	47854929	47857175	.	-	.	ID=Cattle_Y_T01503;Parent=Cattle_Y_G00798;Dbxref=GeneID:132344611,GenBank:XM_059884277.1;Name=XM_059884277.1;gbkey=mRNA;gene=LOC132344611;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01503;gene_id=Cattle_Y_G00798;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884277.1
haplotype2-0000357	CAT	exon	47854929	47855006	.	-	.	ID=Cattle_Y_E02216;Parent=Cattle_Y_T01503;Dbxref=GeneID:132344611,GenBank:XM_059884277.1;gbkey=mRNA;gene=LOC132344611;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01503;gene_id=Cattle_Y_G00798;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884277.1-6
haplotype2-0000357	CAT	exon	47855123	47855268	.	-	.	ID=Cattle_Y_E02217;Parent=Cattle_Y_T01503;Dbxref=GeneID:132344611,GenBank:XM_059884277.1;gbkey=mRNA;gene=LOC132344611;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01503;gene_id=Cattle_Y_G00798;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884277.1-5
haplotype2-0000357	CAT	exon	47855364	47855475	.	-	.	ID=Cattle_Y_E02218;Parent=Cattle_Y_T01503;Dbxref=GeneID:132344611,GenBank:XM_059884277.1;gbkey=mRNA;gene=LOC132344611;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01503;gene_id=Cattle_Y_G00798;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884277.1-4
haplotype2-0000357	CAT	exon	47855659	47855736	.	-	.	ID=Cattle_Y_E02219;Parent=Cattle_Y_T01503;Dbxref=GeneID:132344611,GenBank:XM_059884277.1;gbkey=mRNA;gene=LOC132344611;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01503;gene_id=Cattle_Y_G00798;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884277.1-3
haplotype2-0000357	CAT	exon	47856540	47856955	.	-	.	ID=Cattle_Y_E02220;Parent=Cattle_Y_T01503;Dbxref=GeneID:132344611,GenBank:XM_059884277.1;gbkey=mRNA;gene=LOC132344611;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01503;gene_id=Cattle_Y_G00798;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884277.1-2
haplotype2-0000357	CAT	exon	47857052	47857175	.	-	.	ID=Cattle_Y_E02221;Parent=Cattle_Y_T01503;Dbxref=GeneID:132344611,GenBank:XM_059884277.1;gbkey=mRNA;gene=LOC132344611;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01503;gene_id=Cattle_Y_G00798;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884277.1-1
haplotype2-0000357	CAT	CDS	47854929	47855006	.	-	0	ID=Cattle_Y_C01826;Parent=Cattle_Y_T01503;Dbxref=GeneID:132344611,GenBank:XP_059740260.1;Name=XP_059740260.1;gbkey=CDS;gene=LOC132344611;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740260.1;gene_id=Cattle_Y_G00798;transcript_id=Cattle_Y_T01503;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47855123	47855268	.	-	2	ID=Cattle_Y_C01827;Parent=Cattle_Y_T01503;Dbxref=GeneID:132344611,GenBank:XP_059740260.1;Name=XP_059740260.1;gbkey=CDS;gene=LOC132344611;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740260.1;gene_id=Cattle_Y_G00798;transcript_id=Cattle_Y_T01503;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47855364	47855475	.	-	0	ID=Cattle_Y_C01828;Parent=Cattle_Y_T01503;Dbxref=GeneID:132344611,GenBank:XP_059740260.1;Name=XP_059740260.1;gbkey=CDS;gene=LOC132344611;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740260.1;gene_id=Cattle_Y_G00798;transcript_id=Cattle_Y_T01503;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47855659	47855736	.	-	0	ID=Cattle_Y_C01829;Parent=Cattle_Y_T01503;Dbxref=GeneID:132344611,GenBank:XP_059740260.1;Name=XP_059740260.1;gbkey=CDS;gene=LOC132344611;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740260.1;gene_id=Cattle_Y_G00798;transcript_id=Cattle_Y_T01503;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47856540	47856955	.	-	2	ID=Cattle_Y_C01830;Parent=Cattle_Y_T01503;Dbxref=GeneID:132344611,GenBank:XP_059740260.1;Name=XP_059740260.1;gbkey=CDS;gene=LOC132344611;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740260.1;gene_id=Cattle_Y_G00798;transcript_id=Cattle_Y_T01503;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47857052	47857175	.	-	0	ID=Cattle_Y_C01831;Parent=Cattle_Y_T01503;Dbxref=GeneID:132344611,GenBank:XP_059740260.1;Name=XP_059740260.1;gbkey=CDS;gene=LOC132344611;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740260.1;gene_id=Cattle_Y_G00798;transcript_id=Cattle_Y_T01503;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47862467	47864713	.	-	.	ID=Cattle_Y_G00799;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00799;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	47862467	47864713	.	-	.	ID=Cattle_Y_T01504;Parent=Cattle_Y_G00799;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01504;gene_id=Cattle_Y_G00799;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	47862467	47862544	.	-	.	ID=Cattle_Y_E02222;Parent=Cattle_Y_T01504;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01504;gene_id=Cattle_Y_G00799;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	47862661	47862806	.	-	.	ID=Cattle_Y_E02223;Parent=Cattle_Y_T01504;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01504;gene_id=Cattle_Y_G00799;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	47862902	47863013	.	-	.	ID=Cattle_Y_E02224;Parent=Cattle_Y_T01504;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01504;gene_id=Cattle_Y_G00799;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	47863197	47863274	.	-	.	ID=Cattle_Y_E02225;Parent=Cattle_Y_T01504;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01504;gene_id=Cattle_Y_G00799;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	47864078	47864493	.	-	.	ID=Cattle_Y_E02226;Parent=Cattle_Y_T01504;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01504;gene_id=Cattle_Y_G00799;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	47864590	47864713	.	-	.	ID=Cattle_Y_E02227;Parent=Cattle_Y_T01504;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01504;gene_id=Cattle_Y_G00799;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	47862467	47862544	.	-	0	ID=Cattle_Y_C01832;Parent=Cattle_Y_T01504;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_28;gene_id=Cattle_Y_G00799;transcript_id=Cattle_Y_T01504;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47862661	47862806	.	-	2	ID=Cattle_Y_C01833;Parent=Cattle_Y_T01504;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_28;gene_id=Cattle_Y_G00799;transcript_id=Cattle_Y_T01504;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47862902	47863013	.	-	0	ID=Cattle_Y_C01834;Parent=Cattle_Y_T01504;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_28;gene_id=Cattle_Y_G00799;transcript_id=Cattle_Y_T01504;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47863197	47863274	.	-	0	ID=Cattle_Y_C01835;Parent=Cattle_Y_T01504;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_28;gene_id=Cattle_Y_G00799;transcript_id=Cattle_Y_T01504;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47864078	47864493	.	-	2	ID=Cattle_Y_C01836;Parent=Cattle_Y_T01504;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_28;gene_id=Cattle_Y_G00799;transcript_id=Cattle_Y_T01504;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47864590	47864713	.	-	0	ID=Cattle_Y_C01837;Parent=Cattle_Y_T01504;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_28;gene_id=Cattle_Y_G00799;transcript_id=Cattle_Y_T01504;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47870006	47872252	.	-	.	ID=Cattle_Y_G00800;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00800;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	47870006	47872252	.	-	.	ID=Cattle_Y_T01505;Parent=Cattle_Y_G00800;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01505;gene_id=Cattle_Y_G00800;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	47870006	47870083	.	-	.	ID=Cattle_Y_E02228;Parent=Cattle_Y_T01505;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01505;gene_id=Cattle_Y_G00800;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	47870200	47870345	.	-	.	ID=Cattle_Y_E02229;Parent=Cattle_Y_T01505;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01505;gene_id=Cattle_Y_G00800;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	47870441	47870552	.	-	.	ID=Cattle_Y_E02230;Parent=Cattle_Y_T01505;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01505;gene_id=Cattle_Y_G00800;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	47870736	47870813	.	-	.	ID=Cattle_Y_E02231;Parent=Cattle_Y_T01505;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01505;gene_id=Cattle_Y_G00800;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	47871617	47872032	.	-	.	ID=Cattle_Y_E02232;Parent=Cattle_Y_T01505;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01505;gene_id=Cattle_Y_G00800;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	47872129	47872252	.	-	.	ID=Cattle_Y_E02233;Parent=Cattle_Y_T01505;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01505;gene_id=Cattle_Y_G00800;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	47870006	47870083	.	-	0	ID=Cattle_Y_C01838;Parent=Cattle_Y_T01505;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_19;gene_id=Cattle_Y_G00800;transcript_id=Cattle_Y_T01505;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47870200	47870345	.	-	2	ID=Cattle_Y_C01839;Parent=Cattle_Y_T01505;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_19;gene_id=Cattle_Y_G00800;transcript_id=Cattle_Y_T01505;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47870441	47870552	.	-	0	ID=Cattle_Y_C01840;Parent=Cattle_Y_T01505;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_19;gene_id=Cattle_Y_G00800;transcript_id=Cattle_Y_T01505;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47870736	47870813	.	-	0	ID=Cattle_Y_C01841;Parent=Cattle_Y_T01505;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_19;gene_id=Cattle_Y_G00800;transcript_id=Cattle_Y_T01505;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47871617	47872032	.	-	2	ID=Cattle_Y_C01842;Parent=Cattle_Y_T01505;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_19;gene_id=Cattle_Y_G00800;transcript_id=Cattle_Y_T01505;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47872129	47872252	.	-	0	ID=Cattle_Y_C01843;Parent=Cattle_Y_T01505;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_19;gene_id=Cattle_Y_G00800;transcript_id=Cattle_Y_T01505;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47885085	47887331	.	-	.	ID=Cattle_Y_G00801;Dbxref=GeneID:132344586;Name=LOC132344586;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344586;gene_biotype=protein_coding;gene_id=Cattle_Y_G00801;source_id=gene-LOC132344586
haplotype2-0000357	CAT	mRNA	47885085	47887331	.	-	.	ID=Cattle_Y_T01506;Parent=Cattle_Y_G00801;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;Name=XM_059884252.1;gbkey=mRNA;gene=LOC132344586;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01506;gene_id=Cattle_Y_G00801;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884252.1
haplotype2-0000357	CAT	exon	47885085	47885162	.	-	.	ID=Cattle_Y_E02234;Parent=Cattle_Y_T01506;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;gbkey=mRNA;gene=LOC132344586;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01506;gene_id=Cattle_Y_G00801;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884252.1-6
haplotype2-0000357	CAT	exon	47885279	47885424	.	-	.	ID=Cattle_Y_E02235;Parent=Cattle_Y_T01506;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;gbkey=mRNA;gene=LOC132344586;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01506;gene_id=Cattle_Y_G00801;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884252.1-6
haplotype2-0000357	CAT	exon	47885520	47885631	.	-	.	ID=Cattle_Y_E02236;Parent=Cattle_Y_T01506;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;gbkey=mRNA;gene=LOC132344586;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01506;gene_id=Cattle_Y_G00801;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884252.1-6
haplotype2-0000357	CAT	exon	47885815	47885892	.	-	.	ID=Cattle_Y_E02237;Parent=Cattle_Y_T01506;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;gbkey=mRNA;gene=LOC132344586;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01506;gene_id=Cattle_Y_G00801;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884252.1-6
haplotype2-0000357	CAT	exon	47886696	47887111	.	-	.	ID=Cattle_Y_E02238;Parent=Cattle_Y_T01506;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;gbkey=mRNA;gene=LOC132344586;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01506;gene_id=Cattle_Y_G00801;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884252.1-6
haplotype2-0000357	CAT	exon	47887208	47887331	.	-	.	ID=Cattle_Y_E02239;Parent=Cattle_Y_T01506;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;gbkey=mRNA;gene=LOC132344586;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01506;gene_id=Cattle_Y_G00801;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884252.1-1
haplotype2-0000357	CAT	CDS	47885085	47885162	.	-	0	ID=Cattle_Y_C01844;Parent=Cattle_Y_T01506;gene_id=Cattle_Y_G00801;transcript_id=Cattle_Y_T01506;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47885279	47885424	.	-	2	ID=Cattle_Y_C01845;Parent=Cattle_Y_T01506;gene_id=Cattle_Y_G00801;transcript_id=Cattle_Y_T01506;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47885520	47885631	.	-	0	ID=Cattle_Y_C01846;Parent=Cattle_Y_T01506;gene_id=Cattle_Y_G00801;transcript_id=Cattle_Y_T01506;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47885815	47885892	.	-	0	ID=Cattle_Y_C01847;Parent=Cattle_Y_T01506;gene_id=Cattle_Y_G00801;transcript_id=Cattle_Y_T01506;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47886696	47887111	.	-	2	ID=Cattle_Y_C01848;Parent=Cattle_Y_T01506;gene_id=Cattle_Y_G00801;transcript_id=Cattle_Y_T01506;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47887208	47887331	.	-	0	ID=Cattle_Y_C01849;Parent=Cattle_Y_T01506;gene_id=Cattle_Y_G00801;transcript_id=Cattle_Y_T01506;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47892624	47894870	.	-	.	ID=Cattle_Y_G00802;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00802;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	47892624	47894870	.	-	.	ID=Cattle_Y_T01507;Parent=Cattle_Y_G00802;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01507;gene_id=Cattle_Y_G00802;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	47892624	47892701	.	-	.	ID=Cattle_Y_E02240;Parent=Cattle_Y_T01507;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01507;gene_id=Cattle_Y_G00802;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	47892818	47892963	.	-	.	ID=Cattle_Y_E02241;Parent=Cattle_Y_T01507;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01507;gene_id=Cattle_Y_G00802;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	47893059	47893170	.	-	.	ID=Cattle_Y_E02242;Parent=Cattle_Y_T01507;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01507;gene_id=Cattle_Y_G00802;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	47893354	47893431	.	-	.	ID=Cattle_Y_E02243;Parent=Cattle_Y_T01507;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01507;gene_id=Cattle_Y_G00802;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	47894235	47894650	.	-	.	ID=Cattle_Y_E02244;Parent=Cattle_Y_T01507;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01507;gene_id=Cattle_Y_G00802;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	47894747	47894870	.	-	.	ID=Cattle_Y_E02245;Parent=Cattle_Y_T01507;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01507;gene_id=Cattle_Y_G00802;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	47892624	47892701	.	-	0	ID=Cattle_Y_C01850;Parent=Cattle_Y_T01507;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_32;gene_id=Cattle_Y_G00802;transcript_id=Cattle_Y_T01507;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47892818	47892963	.	-	2	ID=Cattle_Y_C01851;Parent=Cattle_Y_T01507;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_32;gene_id=Cattle_Y_G00802;transcript_id=Cattle_Y_T01507;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47893059	47893170	.	-	0	ID=Cattle_Y_C01852;Parent=Cattle_Y_T01507;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_32;gene_id=Cattle_Y_G00802;transcript_id=Cattle_Y_T01507;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47893354	47893431	.	-	0	ID=Cattle_Y_C01853;Parent=Cattle_Y_T01507;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_32;gene_id=Cattle_Y_G00802;transcript_id=Cattle_Y_T01507;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47894235	47894650	.	-	2	ID=Cattle_Y_C01854;Parent=Cattle_Y_T01507;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_32;gene_id=Cattle_Y_G00802;transcript_id=Cattle_Y_T01507;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47894747	47894870	.	-	0	ID=Cattle_Y_C01855;Parent=Cattle_Y_T01507;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_32;gene_id=Cattle_Y_G00802;transcript_id=Cattle_Y_T01507;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47900162	47902300	.	-	.	ID=Cattle_Y_G00803;Dbxref=GeneID:132344606;Name=LOC132344606;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344606;gene_biotype=protein_coding;partial=true;start_range=.,9732823;gene_id=Cattle_Y_G00803;source_id=gene-LOC132344606
haplotype2-0000357	CAT	mRNA	47900162	47902300	.	-	.	ID=Cattle_Y_T01508;Parent=Cattle_Y_G00803;Dbxref=GeneID:132344606,GenBank:XM_059884272.1;Name=XM_059884272.1;gbkey=mRNA;gene=LOC132344606;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9732823;transcript_id=Cattle_Y_T01508;gene_id=Cattle_Y_G00803;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884272.1
haplotype2-0000357	CAT	exon	47900162	47900239	.	-	.	ID=Cattle_Y_E02246;Parent=Cattle_Y_T01508;Dbxref=GeneID:132344606,GenBank:XM_059884272.1;gbkey=mRNA;gene=LOC132344606;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01508;gene_id=Cattle_Y_G00803;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884272.1-6
haplotype2-0000357	CAT	exon	47900356	47900501	.	-	.	ID=Cattle_Y_E02247;Parent=Cattle_Y_T01508;Dbxref=GeneID:132344606,GenBank:XM_059884272.1;gbkey=mRNA;gene=LOC132344606;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01508;gene_id=Cattle_Y_G00803;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884272.1-5
haplotype2-0000357	CAT	exon	47900597	47900708	.	-	.	ID=Cattle_Y_E02248;Parent=Cattle_Y_T01508;Dbxref=GeneID:132344606,GenBank:XM_059884272.1;gbkey=mRNA;gene=LOC132344606;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01508;gene_id=Cattle_Y_G00803;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884272.1-4
haplotype2-0000357	CAT	exon	47900892	47900969	.	-	.	ID=Cattle_Y_E02249;Parent=Cattle_Y_T01508;Dbxref=GeneID:132344606,GenBank:XM_059884272.1;gbkey=mRNA;gene=LOC132344606;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01508;gene_id=Cattle_Y_G00803;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884272.1-3
haplotype2-0000357	CAT	exon	47901773	47902188	.	-	.	ID=Cattle_Y_E02250;Parent=Cattle_Y_T01508;Dbxref=GeneID:132344606,GenBank:XM_059884272.1;gbkey=mRNA;gene=LOC132344606;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01508;gene_id=Cattle_Y_G00803;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884272.1-2
haplotype2-0000357	CAT	exon	47902285	47902300	.	-	.	ID=Cattle_Y_E02251;Parent=Cattle_Y_T01508;Dbxref=GeneID:132344606,GenBank:XM_059884272.1;gbkey=mRNA;gene=LOC132344606;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9732823;transcript_id=Cattle_Y_T01508;gene_id=Cattle_Y_G00803;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884272.1-1
haplotype2-0000357	CAT	CDS	47900162	47900239	.	-	0	ID=Cattle_Y_C01856;Parent=Cattle_Y_T01508;Dbxref=GeneID:132344606,GenBank:XP_059740255.1;Name=XP_059740255.1;gbkey=CDS;gene=LOC132344606;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740255.1;gene_id=Cattle_Y_G00803;transcript_id=Cattle_Y_T01508;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47900356	47900501	.	-	2	ID=Cattle_Y_C01857;Parent=Cattle_Y_T01508;Dbxref=GeneID:132344606,GenBank:XP_059740255.1;Name=XP_059740255.1;gbkey=CDS;gene=LOC132344606;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740255.1;gene_id=Cattle_Y_G00803;transcript_id=Cattle_Y_T01508;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47900597	47900708	.	-	0	ID=Cattle_Y_C01858;Parent=Cattle_Y_T01508;Dbxref=GeneID:132344606,GenBank:XP_059740255.1;Name=XP_059740255.1;gbkey=CDS;gene=LOC132344606;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740255.1;gene_id=Cattle_Y_G00803;transcript_id=Cattle_Y_T01508;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47900892	47900969	.	-	0	ID=Cattle_Y_C01859;Parent=Cattle_Y_T01508;Dbxref=GeneID:132344606,GenBank:XP_059740255.1;Name=XP_059740255.1;gbkey=CDS;gene=LOC132344606;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740255.1;gene_id=Cattle_Y_G00803;transcript_id=Cattle_Y_T01508;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47901773	47902188	.	-	2	ID=Cattle_Y_C01860;Parent=Cattle_Y_T01508;Dbxref=GeneID:132344606,GenBank:XP_059740255.1;Name=XP_059740255.1;gbkey=CDS;gene=LOC132344606;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740255.1;gene_id=Cattle_Y_G00803;transcript_id=Cattle_Y_T01508;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47902285	47902300	.	-	0	ID=Cattle_Y_C01861;Parent=Cattle_Y_T01508;Dbxref=GeneID:132344606,GenBank:XP_059740255.1;Name=XP_059740255.1;gbkey=CDS;gene=LOC132344606;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740255.1;start_range=.,9732823;gene_id=Cattle_Y_G00803;transcript_id=Cattle_Y_T01508;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47907702	47909948	.	-	.	ID=Cattle_Y_G00804;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00804;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	47907702	47909948	.	-	.	ID=Cattle_Y_T01509;Parent=Cattle_Y_G00804;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01509;gene_id=Cattle_Y_G00804;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	47907702	47907779	.	-	.	ID=Cattle_Y_E02252;Parent=Cattle_Y_T01509;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01509;gene_id=Cattle_Y_G00804;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	47907896	47908041	.	-	.	ID=Cattle_Y_E02253;Parent=Cattle_Y_T01509;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01509;gene_id=Cattle_Y_G00804;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	47908137	47908248	.	-	.	ID=Cattle_Y_E02254;Parent=Cattle_Y_T01509;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01509;gene_id=Cattle_Y_G00804;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	47908432	47908509	.	-	.	ID=Cattle_Y_E02255;Parent=Cattle_Y_T01509;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01509;gene_id=Cattle_Y_G00804;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	47909313	47909728	.	-	.	ID=Cattle_Y_E02256;Parent=Cattle_Y_T01509;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01509;gene_id=Cattle_Y_G00804;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	47909825	47909948	.	-	.	ID=Cattle_Y_E02257;Parent=Cattle_Y_T01509;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01509;gene_id=Cattle_Y_G00804;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	47907702	47907779	.	-	0	ID=Cattle_Y_C01862;Parent=Cattle_Y_T01509;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_26;gene_id=Cattle_Y_G00804;transcript_id=Cattle_Y_T01509;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47907896	47908041	.	-	2	ID=Cattle_Y_C01863;Parent=Cattle_Y_T01509;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_26;gene_id=Cattle_Y_G00804;transcript_id=Cattle_Y_T01509;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47908137	47908248	.	-	0	ID=Cattle_Y_C01864;Parent=Cattle_Y_T01509;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_26;gene_id=Cattle_Y_G00804;transcript_id=Cattle_Y_T01509;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47908432	47908509	.	-	0	ID=Cattle_Y_C01865;Parent=Cattle_Y_T01509;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_26;gene_id=Cattle_Y_G00804;transcript_id=Cattle_Y_T01509;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47909313	47909728	.	-	2	ID=Cattle_Y_C01866;Parent=Cattle_Y_T01509;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_26;gene_id=Cattle_Y_G00804;transcript_id=Cattle_Y_T01509;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47909825	47909948	.	-	0	ID=Cattle_Y_C01867;Parent=Cattle_Y_T01509;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_26;gene_id=Cattle_Y_G00804;transcript_id=Cattle_Y_T01509;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47937860	47940106	.	-	.	ID=Cattle_Y_G00805;Dbxref=GeneID:132344602;Name=LOC132344602;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344602;gene_biotype=protein_coding;gene_id=Cattle_Y_G00805;source_id=gene-LOC132344602
haplotype2-0000357	CAT	mRNA	47937860	47940106	.	-	.	ID=Cattle_Y_T01510;Parent=Cattle_Y_G00805;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;Name=XM_059884268.1;gbkey=mRNA;gene=LOC132344602;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01510;gene_id=Cattle_Y_G00805;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884268.1
haplotype2-0000357	CAT	exon	47937860	47937937	.	-	.	ID=Cattle_Y_E02258;Parent=Cattle_Y_T01510;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01510;gene_id=Cattle_Y_G00805;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	47938054	47938199	.	-	.	ID=Cattle_Y_E02259;Parent=Cattle_Y_T01510;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01510;gene_id=Cattle_Y_G00805;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-5
haplotype2-0000357	CAT	exon	47938295	47938406	.	-	.	ID=Cattle_Y_E02260;Parent=Cattle_Y_T01510;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01510;gene_id=Cattle_Y_G00805;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-4
haplotype2-0000357	CAT	exon	47938590	47938667	.	-	.	ID=Cattle_Y_E02261;Parent=Cattle_Y_T01510;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01510;gene_id=Cattle_Y_G00805;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-3
haplotype2-0000357	CAT	exon	47939471	47939886	.	-	.	ID=Cattle_Y_E02262;Parent=Cattle_Y_T01510;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01510;gene_id=Cattle_Y_G00805;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-2
haplotype2-0000357	CAT	exon	47939983	47940106	.	-	.	ID=Cattle_Y_E02263;Parent=Cattle_Y_T01510;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01510;gene_id=Cattle_Y_G00805;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-1
haplotype2-0000357	CAT	CDS	47937860	47937937	.	-	0	ID=Cattle_Y_C01868;Parent=Cattle_Y_T01510;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_6;gene_id=Cattle_Y_G00805;transcript_id=Cattle_Y_T01510;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47938054	47938199	.	-	2	ID=Cattle_Y_C01869;Parent=Cattle_Y_T01510;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_6;gene_id=Cattle_Y_G00805;transcript_id=Cattle_Y_T01510;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47938295	47938406	.	-	0	ID=Cattle_Y_C01870;Parent=Cattle_Y_T01510;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_6;gene_id=Cattle_Y_G00805;transcript_id=Cattle_Y_T01510;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47938590	47938667	.	-	0	ID=Cattle_Y_C01871;Parent=Cattle_Y_T01510;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_6;gene_id=Cattle_Y_G00805;transcript_id=Cattle_Y_T01510;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47939471	47939886	.	-	2	ID=Cattle_Y_C01872;Parent=Cattle_Y_T01510;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_6;gene_id=Cattle_Y_G00805;transcript_id=Cattle_Y_T01510;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47939983	47940106	.	-	0	ID=Cattle_Y_C01873;Parent=Cattle_Y_T01510;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_6;gene_id=Cattle_Y_G00805;transcript_id=Cattle_Y_T01510;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47945398	47947644	1636	-	.	ID=Cattle_Y_G00806;Dbxref=GeneID:132344613;Name=LOC132344613;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344613;gene_biotype=protein_coding;gene_id=Cattle_Y_G00806;source_id=gene-LOC132344613
haplotype2-0000357	CAT	mRNA	47945398	47947644	1636	-	.	ID=Cattle_Y_T01511;Parent=Cattle_Y_G00806;Dbxref=GeneID:132344613,GenBank:XM_059884279.1;Name=XM_059884279.1;gbkey=mRNA;gene=LOC132344613;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01511;gene_id=Cattle_Y_G00806;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884279.1
haplotype2-0000357	CAT	exon	47945398	47945475	136	-	0	ID=Cattle_Y_E02264;Parent=Cattle_Y_T01511;gene_id=Cattle_Y_G00806;transcript_id=Cattle_Y_T01511;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	47945592	47945737	270	-	2	ID=Cattle_Y_E02265;Parent=Cattle_Y_T01511;gene_id=Cattle_Y_G00806;transcript_id=Cattle_Y_T01511;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	47945833	47945944	194	-	0	ID=Cattle_Y_E02266;Parent=Cattle_Y_T01511;gene_id=Cattle_Y_G00806;transcript_id=Cattle_Y_T01511;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	47946128	47946205	133	-	0	ID=Cattle_Y_E02267;Parent=Cattle_Y_T01511;gene_id=Cattle_Y_G00806;transcript_id=Cattle_Y_T01511;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	47947009	47947424	685	-	2	ID=Cattle_Y_E02268;Parent=Cattle_Y_T01511;gene_id=Cattle_Y_G00806;transcript_id=Cattle_Y_T01511;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	47947521	47947644	218	-	0	ID=Cattle_Y_E02269;Parent=Cattle_Y_T01511;gene_id=Cattle_Y_G00806;transcript_id=Cattle_Y_T01511;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47945398	47945475	136	-	0	ID=Cattle_Y_C01874;Parent=Cattle_Y_T01511;gene_id=Cattle_Y_G00806;transcript_id=Cattle_Y_T01511;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47945592	47945737	270	-	2	ID=Cattle_Y_C01875;Parent=Cattle_Y_T01511;gene_id=Cattle_Y_G00806;transcript_id=Cattle_Y_T01511;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47945833	47945944	194	-	0	ID=Cattle_Y_C01876;Parent=Cattle_Y_T01511;gene_id=Cattle_Y_G00806;transcript_id=Cattle_Y_T01511;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47946128	47946205	133	-	0	ID=Cattle_Y_C01877;Parent=Cattle_Y_T01511;gene_id=Cattle_Y_G00806;transcript_id=Cattle_Y_T01511;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47947009	47947424	685	-	2	ID=Cattle_Y_C01878;Parent=Cattle_Y_T01511;gene_id=Cattle_Y_G00806;transcript_id=Cattle_Y_T01511;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47947521	47947644	218	-	0	ID=Cattle_Y_C01879;Parent=Cattle_Y_T01511;gene_id=Cattle_Y_G00806;transcript_id=Cattle_Y_T01511;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47952939	47955185	1636	-	.	ID=Cattle_Y_G00807;Dbxref=GeneID:132344613;Name=LOC132344613;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344613;gene_biotype=protein_coding;gene_id=Cattle_Y_G00807;source_id=gene-LOC132344613
haplotype2-0000357	CAT	mRNA	47952939	47955185	1636	-	.	ID=Cattle_Y_T01512;Parent=Cattle_Y_G00807;Dbxref=GeneID:132344613,GenBank:XM_059884279.1;Name=XM_059884279.1;gbkey=mRNA;gene=LOC132344613;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01512;gene_id=Cattle_Y_G00807;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884279.1
haplotype2-0000357	CAT	exon	47952939	47953016	136	-	0	ID=Cattle_Y_E02270;Parent=Cattle_Y_T01512;gene_id=Cattle_Y_G00807;transcript_id=Cattle_Y_T01512;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	47953133	47953278	270	-	2	ID=Cattle_Y_E02271;Parent=Cattle_Y_T01512;gene_id=Cattle_Y_G00807;transcript_id=Cattle_Y_T01512;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	47953374	47953485	194	-	0	ID=Cattle_Y_E02272;Parent=Cattle_Y_T01512;gene_id=Cattle_Y_G00807;transcript_id=Cattle_Y_T01512;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	47953669	47953746	133	-	0	ID=Cattle_Y_E02273;Parent=Cattle_Y_T01512;gene_id=Cattle_Y_G00807;transcript_id=Cattle_Y_T01512;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	47954550	47954965	685	-	2	ID=Cattle_Y_E02274;Parent=Cattle_Y_T01512;gene_id=Cattle_Y_G00807;transcript_id=Cattle_Y_T01512;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	47955062	47955185	218	-	0	ID=Cattle_Y_E02275;Parent=Cattle_Y_T01512;gene_id=Cattle_Y_G00807;transcript_id=Cattle_Y_T01512;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47952939	47953016	136	-	0	ID=Cattle_Y_C01880;Parent=Cattle_Y_T01512;gene_id=Cattle_Y_G00807;transcript_id=Cattle_Y_T01512;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47953133	47953278	270	-	2	ID=Cattle_Y_C01881;Parent=Cattle_Y_T01512;gene_id=Cattle_Y_G00807;transcript_id=Cattle_Y_T01512;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47953374	47953485	194	-	0	ID=Cattle_Y_C01882;Parent=Cattle_Y_T01512;gene_id=Cattle_Y_G00807;transcript_id=Cattle_Y_T01512;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47953669	47953746	133	-	0	ID=Cattle_Y_C01883;Parent=Cattle_Y_T01512;gene_id=Cattle_Y_G00807;transcript_id=Cattle_Y_T01512;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47954550	47954965	685	-	2	ID=Cattle_Y_C01884;Parent=Cattle_Y_T01512;gene_id=Cattle_Y_G00807;transcript_id=Cattle_Y_T01512;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47955062	47955185	218	-	0	ID=Cattle_Y_C01885;Parent=Cattle_Y_T01512;gene_id=Cattle_Y_G00807;transcript_id=Cattle_Y_T01512;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47968017	47970263	1641	-	.	ID=Cattle_Y_G00808;Dbxref=GeneID:132344586;Name=LOC132344586;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344586;gene_biotype=protein_coding;gene_id=Cattle_Y_G00808;source_id=gene-LOC132344586
haplotype2-0000357	CAT	mRNA	47968017	47970263	1641	-	.	ID=Cattle_Y_T01513;Parent=Cattle_Y_G00808;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;Name=XM_059884252.1;gbkey=mRNA;gene=LOC132344586;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01513;gene_id=Cattle_Y_G00808;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884252.1
haplotype2-0000357	CAT	exon	47968017	47968094	136	-	0	ID=Cattle_Y_E02276;Parent=Cattle_Y_T01513;gene_id=Cattle_Y_G00808;transcript_id=Cattle_Y_T01513;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	47968211	47968356	263	-	2	ID=Cattle_Y_E02277;Parent=Cattle_Y_T01513;gene_id=Cattle_Y_G00808;transcript_id=Cattle_Y_T01513;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	47968452	47968563	203	-	0	ID=Cattle_Y_E02278;Parent=Cattle_Y_T01513;gene_id=Cattle_Y_G00808;transcript_id=Cattle_Y_T01513;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	47968747	47968824	133	-	0	ID=Cattle_Y_E02279;Parent=Cattle_Y_T01513;gene_id=Cattle_Y_G00808;transcript_id=Cattle_Y_T01513;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	47969628	47970043	688	-	2	ID=Cattle_Y_E02280;Parent=Cattle_Y_T01513;gene_id=Cattle_Y_G00808;transcript_id=Cattle_Y_T01513;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	47970140	47970263	218	-	0	ID=Cattle_Y_E02281;Parent=Cattle_Y_T01513;gene_id=Cattle_Y_G00808;transcript_id=Cattle_Y_T01513;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47968017	47968094	136	-	0	ID=Cattle_Y_C01886;Parent=Cattle_Y_T01513;gene_id=Cattle_Y_G00808;transcript_id=Cattle_Y_T01513;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47968211	47968356	263	-	2	ID=Cattle_Y_C01887;Parent=Cattle_Y_T01513;gene_id=Cattle_Y_G00808;transcript_id=Cattle_Y_T01513;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47968452	47968563	203	-	0	ID=Cattle_Y_C01888;Parent=Cattle_Y_T01513;gene_id=Cattle_Y_G00808;transcript_id=Cattle_Y_T01513;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47968747	47968824	133	-	0	ID=Cattle_Y_C01889;Parent=Cattle_Y_T01513;gene_id=Cattle_Y_G00808;transcript_id=Cattle_Y_T01513;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47969628	47970043	688	-	2	ID=Cattle_Y_C01890;Parent=Cattle_Y_T01513;gene_id=Cattle_Y_G00808;transcript_id=Cattle_Y_T01513;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47970140	47970263	218	-	0	ID=Cattle_Y_C01891;Parent=Cattle_Y_T01513;gene_id=Cattle_Y_G00808;transcript_id=Cattle_Y_T01513;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47983092	47985338	.	-	.	ID=Cattle_Y_G00809;Dbxref=GeneID:132344602;Name=LOC132344602;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344602;gene_biotype=protein_coding;gene_id=Cattle_Y_G00809;source_id=gene-LOC132344602
haplotype2-0000357	CAT	mRNA	47983092	47985338	.	-	.	ID=Cattle_Y_T01514;Parent=Cattle_Y_G00809;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;Name=XM_059884268.1;gbkey=mRNA;gene=LOC132344602;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01514;gene_id=Cattle_Y_G00809;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884268.1
haplotype2-0000357	CAT	exon	47983092	47983169	.	-	.	ID=Cattle_Y_E02282;Parent=Cattle_Y_T01514;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01514;gene_id=Cattle_Y_G00809;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	47983286	47983431	.	-	.	ID=Cattle_Y_E02283;Parent=Cattle_Y_T01514;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01514;gene_id=Cattle_Y_G00809;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	47983527	47983638	.	-	.	ID=Cattle_Y_E02284;Parent=Cattle_Y_T01514;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01514;gene_id=Cattle_Y_G00809;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	47983822	47983899	.	-	.	ID=Cattle_Y_E02285;Parent=Cattle_Y_T01514;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01514;gene_id=Cattle_Y_G00809;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	47984703	47985118	.	-	.	ID=Cattle_Y_E02286;Parent=Cattle_Y_T01514;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01514;gene_id=Cattle_Y_G00809;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	47985215	47985338	.	-	.	ID=Cattle_Y_E02287;Parent=Cattle_Y_T01514;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01514;gene_id=Cattle_Y_G00809;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-1
haplotype2-0000357	CAT	CDS	47983092	47983169	.	-	0	ID=Cattle_Y_C01892;Parent=Cattle_Y_T01514;gene_id=Cattle_Y_G00809;transcript_id=Cattle_Y_T01514;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47983286	47983431	.	-	2	ID=Cattle_Y_C01893;Parent=Cattle_Y_T01514;gene_id=Cattle_Y_G00809;transcript_id=Cattle_Y_T01514;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47983527	47983638	.	-	0	ID=Cattle_Y_C01894;Parent=Cattle_Y_T01514;gene_id=Cattle_Y_G00809;transcript_id=Cattle_Y_T01514;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47983822	47983899	.	-	0	ID=Cattle_Y_C01895;Parent=Cattle_Y_T01514;gene_id=Cattle_Y_G00809;transcript_id=Cattle_Y_T01514;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47984703	47985118	.	-	2	ID=Cattle_Y_C01896;Parent=Cattle_Y_T01514;gene_id=Cattle_Y_G00809;transcript_id=Cattle_Y_T01514;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47985215	47985338	.	-	0	ID=Cattle_Y_C01897;Parent=Cattle_Y_T01514;gene_id=Cattle_Y_G00809;transcript_id=Cattle_Y_T01514;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	47990628	47992874	.	-	.	ID=Cattle_Y_G00810;Dbxref=GeneID:132344602;Name=LOC132344602;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344602;gene_biotype=protein_coding;gene_id=Cattle_Y_G00810;source_id=gene-LOC132344602
haplotype2-0000357	CAT	mRNA	47990628	47992874	.	-	.	ID=Cattle_Y_T01515;Parent=Cattle_Y_G00810;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;Name=XM_059884268.1;gbkey=mRNA;gene=LOC132344602;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01515;gene_id=Cattle_Y_G00810;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884268.1
haplotype2-0000357	CAT	exon	47990628	47990705	.	-	.	ID=Cattle_Y_E02288;Parent=Cattle_Y_T01515;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01515;gene_id=Cattle_Y_G00810;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	47990822	47990967	.	-	.	ID=Cattle_Y_E02289;Parent=Cattle_Y_T01515;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01515;gene_id=Cattle_Y_G00810;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	47991063	47991174	.	-	.	ID=Cattle_Y_E02290;Parent=Cattle_Y_T01515;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01515;gene_id=Cattle_Y_G00810;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	47991358	47991435	.	-	.	ID=Cattle_Y_E02291;Parent=Cattle_Y_T01515;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01515;gene_id=Cattle_Y_G00810;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	47992239	47992654	.	-	.	ID=Cattle_Y_E02292;Parent=Cattle_Y_T01515;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01515;gene_id=Cattle_Y_G00810;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	47992751	47992874	.	-	.	ID=Cattle_Y_E02293;Parent=Cattle_Y_T01515;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01515;gene_id=Cattle_Y_G00810;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-1
haplotype2-0000357	CAT	CDS	47990628	47990705	.	-	0	ID=Cattle_Y_C01898;Parent=Cattle_Y_T01515;gene_id=Cattle_Y_G00810;transcript_id=Cattle_Y_T01515;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47990822	47990967	.	-	2	ID=Cattle_Y_C01899;Parent=Cattle_Y_T01515;gene_id=Cattle_Y_G00810;transcript_id=Cattle_Y_T01515;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47991063	47991174	.	-	0	ID=Cattle_Y_C01900;Parent=Cattle_Y_T01515;gene_id=Cattle_Y_G00810;transcript_id=Cattle_Y_T01515;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47991358	47991435	.	-	0	ID=Cattle_Y_C01901;Parent=Cattle_Y_T01515;gene_id=Cattle_Y_G00810;transcript_id=Cattle_Y_T01515;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47992239	47992654	.	-	2	ID=Cattle_Y_C01902;Parent=Cattle_Y_T01515;gene_id=Cattle_Y_G00810;transcript_id=Cattle_Y_T01515;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	47992751	47992874	.	-	0	ID=Cattle_Y_C01903;Parent=Cattle_Y_T01515;gene_id=Cattle_Y_G00810;transcript_id=Cattle_Y_T01515;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48005704	48007950	.	-	.	ID=Cattle_Y_G00811;Dbxref=GeneID:132344601;Name=LOC132344601;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344601;gene_biotype=protein_coding;gene_id=Cattle_Y_G00811;source_id=gene-LOC132344601
haplotype2-0000357	CAT	mRNA	48005704	48007950	.	-	.	ID=Cattle_Y_T01516;Parent=Cattle_Y_G00811;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;Name=XM_059884267.1;gbkey=mRNA;gene=LOC132344601;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01516;gene_id=Cattle_Y_G00811;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884267.1
haplotype2-0000357	CAT	exon	48005704	48005781	.	-	.	ID=Cattle_Y_E02294;Parent=Cattle_Y_T01516;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01516;gene_id=Cattle_Y_G00811;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-6
haplotype2-0000357	CAT	exon	48005898	48006043	.	-	.	ID=Cattle_Y_E02295;Parent=Cattle_Y_T01516;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01516;gene_id=Cattle_Y_G00811;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-5
haplotype2-0000357	CAT	exon	48006139	48006250	.	-	.	ID=Cattle_Y_E02296;Parent=Cattle_Y_T01516;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01516;gene_id=Cattle_Y_G00811;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-4
haplotype2-0000357	CAT	exon	48006434	48006511	.	-	.	ID=Cattle_Y_E02297;Parent=Cattle_Y_T01516;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01516;gene_id=Cattle_Y_G00811;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-3
haplotype2-0000357	CAT	exon	48007315	48007730	.	-	.	ID=Cattle_Y_E02298;Parent=Cattle_Y_T01516;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01516;gene_id=Cattle_Y_G00811;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-2
haplotype2-0000357	CAT	exon	48007827	48007950	.	-	.	ID=Cattle_Y_E02299;Parent=Cattle_Y_T01516;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01516;gene_id=Cattle_Y_G00811;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-1
haplotype2-0000357	CAT	CDS	48005704	48005781	.	-	0	ID=Cattle_Y_C01904;Parent=Cattle_Y_T01516;Dbxref=GeneID:132344601,GenBank:XP_059740250.1;Name=XP_059740250.1;gbkey=CDS;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740250.1_3;gene_id=Cattle_Y_G00811;transcript_id=Cattle_Y_T01516;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48005898	48006043	.	-	2	ID=Cattle_Y_C01905;Parent=Cattle_Y_T01516;Dbxref=GeneID:132344601,GenBank:XP_059740250.1;Name=XP_059740250.1;gbkey=CDS;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740250.1_3;gene_id=Cattle_Y_G00811;transcript_id=Cattle_Y_T01516;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48006139	48006250	.	-	0	ID=Cattle_Y_C01906;Parent=Cattle_Y_T01516;Dbxref=GeneID:132344601,GenBank:XP_059740250.1;Name=XP_059740250.1;gbkey=CDS;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740250.1_3;gene_id=Cattle_Y_G00811;transcript_id=Cattle_Y_T01516;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48006434	48006511	.	-	0	ID=Cattle_Y_C01907;Parent=Cattle_Y_T01516;Dbxref=GeneID:132344601,GenBank:XP_059740250.1;Name=XP_059740250.1;gbkey=CDS;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740250.1_3;gene_id=Cattle_Y_G00811;transcript_id=Cattle_Y_T01516;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48007315	48007730	.	-	2	ID=Cattle_Y_C01908;Parent=Cattle_Y_T01516;Dbxref=GeneID:132344601,GenBank:XP_059740250.1;Name=XP_059740250.1;gbkey=CDS;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740250.1_3;gene_id=Cattle_Y_G00811;transcript_id=Cattle_Y_T01516;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48007827	48007950	.	-	0	ID=Cattle_Y_C01909;Parent=Cattle_Y_T01516;Dbxref=GeneID:132344601,GenBank:XP_059740250.1;Name=XP_059740250.1;gbkey=CDS;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740250.1_3;gene_id=Cattle_Y_G00811;transcript_id=Cattle_Y_T01516;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48013242	48015488	.	-	.	ID=Cattle_Y_G00812;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00812;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48013242	48015488	.	-	.	ID=Cattle_Y_T01517;Parent=Cattle_Y_G00812;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01517;gene_id=Cattle_Y_G00812;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48013242	48013319	.	-	.	ID=Cattle_Y_E02300;Parent=Cattle_Y_T01517;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01517;gene_id=Cattle_Y_G00812;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48013436	48013581	.	-	.	ID=Cattle_Y_E02301;Parent=Cattle_Y_T01517;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01517;gene_id=Cattle_Y_G00812;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48013677	48013788	.	-	.	ID=Cattle_Y_E02302;Parent=Cattle_Y_T01517;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01517;gene_id=Cattle_Y_G00812;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48013972	48014049	.	-	.	ID=Cattle_Y_E02303;Parent=Cattle_Y_T01517;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01517;gene_id=Cattle_Y_G00812;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48014853	48015268	.	-	.	ID=Cattle_Y_E02304;Parent=Cattle_Y_T01517;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01517;gene_id=Cattle_Y_G00812;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48015365	48015488	.	-	.	ID=Cattle_Y_E02305;Parent=Cattle_Y_T01517;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01517;gene_id=Cattle_Y_G00812;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48013242	48013319	.	-	0	ID=Cattle_Y_C01910;Parent=Cattle_Y_T01517;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_33;gene_id=Cattle_Y_G00812;transcript_id=Cattle_Y_T01517;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48013436	48013581	.	-	2	ID=Cattle_Y_C01911;Parent=Cattle_Y_T01517;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_33;gene_id=Cattle_Y_G00812;transcript_id=Cattle_Y_T01517;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48013677	48013788	.	-	0	ID=Cattle_Y_C01912;Parent=Cattle_Y_T01517;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_33;gene_id=Cattle_Y_G00812;transcript_id=Cattle_Y_T01517;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48013972	48014049	.	-	0	ID=Cattle_Y_C01913;Parent=Cattle_Y_T01517;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_33;gene_id=Cattle_Y_G00812;transcript_id=Cattle_Y_T01517;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48014853	48015268	.	-	2	ID=Cattle_Y_C01914;Parent=Cattle_Y_T01517;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_33;gene_id=Cattle_Y_G00812;transcript_id=Cattle_Y_T01517;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48015365	48015488	.	-	0	ID=Cattle_Y_C01915;Parent=Cattle_Y_T01517;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_33;gene_id=Cattle_Y_G00812;transcript_id=Cattle_Y_T01517;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48028319	48030567	.	-	.	ID=Cattle_Y_G00813;Dbxref=GeneID:132344601;Name=LOC132344601;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344601;gene_biotype=protein_coding;gene_id=Cattle_Y_G00813;source_id=gene-LOC132344601
haplotype2-0000357	CAT	mRNA	48028319	48030567	.	-	.	ID=Cattle_Y_T01518;Parent=Cattle_Y_G00813;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;Name=XM_059884267.1;gbkey=mRNA;gene=LOC132344601;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01518;gene_id=Cattle_Y_G00813;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884267.1
haplotype2-0000357	CAT	exon	48028319	48028396	.	-	.	ID=Cattle_Y_E02306;Parent=Cattle_Y_T01518;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01518;gene_id=Cattle_Y_G00813;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-6
haplotype2-0000357	CAT	exon	48028513	48028658	.	-	.	ID=Cattle_Y_E02307;Parent=Cattle_Y_T01518;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01518;gene_id=Cattle_Y_G00813;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-5
haplotype2-0000357	CAT	exon	48028754	48028865	.	-	.	ID=Cattle_Y_E02308;Parent=Cattle_Y_T01518;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01518;gene_id=Cattle_Y_G00813;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-4
haplotype2-0000357	CAT	exon	48029049	48029126	.	-	.	ID=Cattle_Y_E02309;Parent=Cattle_Y_T01518;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01518;gene_id=Cattle_Y_G00813;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-3
haplotype2-0000357	CAT	exon	48029932	48030347	.	-	.	ID=Cattle_Y_E02310;Parent=Cattle_Y_T01518;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01518;gene_id=Cattle_Y_G00813;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-2
haplotype2-0000357	CAT	exon	48030444	48030567	.	-	.	ID=Cattle_Y_E02311;Parent=Cattle_Y_T01518;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01518;gene_id=Cattle_Y_G00813;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-1
haplotype2-0000357	CAT	CDS	48028319	48028396	.	-	0	ID=Cattle_Y_C01916;Parent=Cattle_Y_T01518;Dbxref=GeneID:132344601,GenBank:XP_059740250.1;Name=XP_059740250.1;gbkey=CDS;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740250.1_5;gene_id=Cattle_Y_G00813;transcript_id=Cattle_Y_T01518;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48028513	48028658	.	-	2	ID=Cattle_Y_C01917;Parent=Cattle_Y_T01518;Dbxref=GeneID:132344601,GenBank:XP_059740250.1;Name=XP_059740250.1;gbkey=CDS;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740250.1_5;gene_id=Cattle_Y_G00813;transcript_id=Cattle_Y_T01518;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48028754	48028865	.	-	0	ID=Cattle_Y_C01918;Parent=Cattle_Y_T01518;Dbxref=GeneID:132344601,GenBank:XP_059740250.1;Name=XP_059740250.1;gbkey=CDS;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740250.1_5;gene_id=Cattle_Y_G00813;transcript_id=Cattle_Y_T01518;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48029049	48029126	.	-	0	ID=Cattle_Y_C01919;Parent=Cattle_Y_T01518;Dbxref=GeneID:132344601,GenBank:XP_059740250.1;Name=XP_059740250.1;gbkey=CDS;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740250.1_5;gene_id=Cattle_Y_G00813;transcript_id=Cattle_Y_T01518;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48029932	48030347	.	-	2	ID=Cattle_Y_C01920;Parent=Cattle_Y_T01518;Dbxref=GeneID:132344601,GenBank:XP_059740250.1;Name=XP_059740250.1;gbkey=CDS;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740250.1_5;gene_id=Cattle_Y_G00813;transcript_id=Cattle_Y_T01518;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48030444	48030567	.	-	0	ID=Cattle_Y_C01921;Parent=Cattle_Y_T01518;Dbxref=GeneID:132344601,GenBank:XP_059740250.1;Name=XP_059740250.1;gbkey=CDS;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740250.1_5;gene_id=Cattle_Y_G00813;transcript_id=Cattle_Y_T01518;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48035863	48038109	.	-	.	ID=Cattle_Y_G00814;Dbxref=GeneID:132344586;Name=LOC132344586;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344586;gene_biotype=protein_coding;gene_id=Cattle_Y_G00814;source_id=gene-LOC132344586
haplotype2-0000357	CAT	mRNA	48035863	48038109	.	-	.	ID=Cattle_Y_T01519;Parent=Cattle_Y_G00814;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;Name=XM_059884252.1;gbkey=mRNA;gene=LOC132344586;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01519;gene_id=Cattle_Y_G00814;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884252.1
haplotype2-0000357	CAT	exon	48035863	48035940	.	-	.	ID=Cattle_Y_E02312;Parent=Cattle_Y_T01519;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;gbkey=mRNA;gene=LOC132344586;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01519;gene_id=Cattle_Y_G00814;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884252.1-6
haplotype2-0000357	CAT	exon	48036057	48036202	.	-	.	ID=Cattle_Y_E02313;Parent=Cattle_Y_T01519;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;gbkey=mRNA;gene=LOC132344586;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01519;gene_id=Cattle_Y_G00814;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884252.1-6
haplotype2-0000357	CAT	exon	48036298	48036409	.	-	.	ID=Cattle_Y_E02314;Parent=Cattle_Y_T01519;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;gbkey=mRNA;gene=LOC132344586;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01519;gene_id=Cattle_Y_G00814;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884252.1-6
haplotype2-0000357	CAT	exon	48036593	48036670	.	-	.	ID=Cattle_Y_E02315;Parent=Cattle_Y_T01519;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;gbkey=mRNA;gene=LOC132344586;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01519;gene_id=Cattle_Y_G00814;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884252.1-6
haplotype2-0000357	CAT	exon	48037474	48037889	.	-	.	ID=Cattle_Y_E02316;Parent=Cattle_Y_T01519;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;gbkey=mRNA;gene=LOC132344586;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01519;gene_id=Cattle_Y_G00814;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884252.1-6
haplotype2-0000357	CAT	exon	48037986	48038109	.	-	.	ID=Cattle_Y_E02317;Parent=Cattle_Y_T01519;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;gbkey=mRNA;gene=LOC132344586;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01519;gene_id=Cattle_Y_G00814;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884252.1-1
haplotype2-0000357	CAT	CDS	48035863	48035940	.	-	0	ID=Cattle_Y_C01922;Parent=Cattle_Y_T01519;gene_id=Cattle_Y_G00814;transcript_id=Cattle_Y_T01519;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48036057	48036202	.	-	2	ID=Cattle_Y_C01923;Parent=Cattle_Y_T01519;gene_id=Cattle_Y_G00814;transcript_id=Cattle_Y_T01519;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48036298	48036409	.	-	0	ID=Cattle_Y_C01924;Parent=Cattle_Y_T01519;gene_id=Cattle_Y_G00814;transcript_id=Cattle_Y_T01519;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48036593	48036670	.	-	0	ID=Cattle_Y_C01925;Parent=Cattle_Y_T01519;gene_id=Cattle_Y_G00814;transcript_id=Cattle_Y_T01519;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48037474	48037889	.	-	2	ID=Cattle_Y_C01926;Parent=Cattle_Y_T01519;gene_id=Cattle_Y_G00814;transcript_id=Cattle_Y_T01519;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48037986	48038109	.	-	0	ID=Cattle_Y_C01927;Parent=Cattle_Y_T01519;gene_id=Cattle_Y_G00814;transcript_id=Cattle_Y_T01519;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48058479	48060725	.	-	.	ID=Cattle_Y_G00815;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00815;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48058479	48060725	.	-	.	ID=Cattle_Y_T01520;Parent=Cattle_Y_G00815;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01520;gene_id=Cattle_Y_G00815;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48058479	48058556	.	-	.	ID=Cattle_Y_E02318;Parent=Cattle_Y_T01520;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01520;gene_id=Cattle_Y_G00815;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48058673	48058818	.	-	.	ID=Cattle_Y_E02319;Parent=Cattle_Y_T01520;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01520;gene_id=Cattle_Y_G00815;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48058914	48059025	.	-	.	ID=Cattle_Y_E02320;Parent=Cattle_Y_T01520;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01520;gene_id=Cattle_Y_G00815;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48059209	48059286	.	-	.	ID=Cattle_Y_E02321;Parent=Cattle_Y_T01520;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01520;gene_id=Cattle_Y_G00815;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48060090	48060505	.	-	.	ID=Cattle_Y_E02322;Parent=Cattle_Y_T01520;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01520;gene_id=Cattle_Y_G00815;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48060602	48060725	.	-	.	ID=Cattle_Y_E02323;Parent=Cattle_Y_T01520;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01520;gene_id=Cattle_Y_G00815;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48058479	48058556	.	-	0	ID=Cattle_Y_C01928;Parent=Cattle_Y_T01520;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_35;gene_id=Cattle_Y_G00815;transcript_id=Cattle_Y_T01520;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48058673	48058818	.	-	2	ID=Cattle_Y_C01929;Parent=Cattle_Y_T01520;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_35;gene_id=Cattle_Y_G00815;transcript_id=Cattle_Y_T01520;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48058914	48059025	.	-	0	ID=Cattle_Y_C01930;Parent=Cattle_Y_T01520;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_35;gene_id=Cattle_Y_G00815;transcript_id=Cattle_Y_T01520;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48059209	48059286	.	-	0	ID=Cattle_Y_C01931;Parent=Cattle_Y_T01520;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_35;gene_id=Cattle_Y_G00815;transcript_id=Cattle_Y_T01520;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48060090	48060505	.	-	2	ID=Cattle_Y_C01932;Parent=Cattle_Y_T01520;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_35;gene_id=Cattle_Y_G00815;transcript_id=Cattle_Y_T01520;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48060602	48060725	.	-	0	ID=Cattle_Y_C01933;Parent=Cattle_Y_T01520;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_35;gene_id=Cattle_Y_G00815;transcript_id=Cattle_Y_T01520;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48066017	48068263	.	-	.	ID=Cattle_Y_G00816;Dbxref=GeneID:132344602;Name=LOC132344602;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344602;gene_biotype=protein_coding;gene_id=Cattle_Y_G00816;source_id=gene-LOC132344602
haplotype2-0000357	CAT	mRNA	48066017	48068263	.	-	.	ID=Cattle_Y_T01521;Parent=Cattle_Y_G00816;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;Name=XM_059884268.1;gbkey=mRNA;gene=LOC132344602;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01521;gene_id=Cattle_Y_G00816;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884268.1
haplotype2-0000357	CAT	exon	48066017	48066094	.	-	.	ID=Cattle_Y_E02324;Parent=Cattle_Y_T01521;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01521;gene_id=Cattle_Y_G00816;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	48066211	48066356	.	-	.	ID=Cattle_Y_E02325;Parent=Cattle_Y_T01521;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01521;gene_id=Cattle_Y_G00816;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	48066452	48066563	.	-	.	ID=Cattle_Y_E02326;Parent=Cattle_Y_T01521;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01521;gene_id=Cattle_Y_G00816;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	48066747	48066824	.	-	.	ID=Cattle_Y_E02327;Parent=Cattle_Y_T01521;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01521;gene_id=Cattle_Y_G00816;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	48067628	48068043	.	-	.	ID=Cattle_Y_E02328;Parent=Cattle_Y_T01521;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01521;gene_id=Cattle_Y_G00816;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	48068140	48068263	.	-	.	ID=Cattle_Y_E02329;Parent=Cattle_Y_T01521;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01521;gene_id=Cattle_Y_G00816;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-1
haplotype2-0000357	CAT	CDS	48066017	48066094	.	-	0	ID=Cattle_Y_C01934;Parent=Cattle_Y_T01521;gene_id=Cattle_Y_G00816;transcript_id=Cattle_Y_T01521;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48066211	48066356	.	-	2	ID=Cattle_Y_C01935;Parent=Cattle_Y_T01521;gene_id=Cattle_Y_G00816;transcript_id=Cattle_Y_T01521;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48066452	48066563	.	-	0	ID=Cattle_Y_C01936;Parent=Cattle_Y_T01521;gene_id=Cattle_Y_G00816;transcript_id=Cattle_Y_T01521;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48066747	48066824	.	-	0	ID=Cattle_Y_C01937;Parent=Cattle_Y_T01521;gene_id=Cattle_Y_G00816;transcript_id=Cattle_Y_T01521;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48067628	48068043	.	-	2	ID=Cattle_Y_C01938;Parent=Cattle_Y_T01521;gene_id=Cattle_Y_G00816;transcript_id=Cattle_Y_T01521;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48068140	48068263	.	-	0	ID=Cattle_Y_C01939;Parent=Cattle_Y_T01521;gene_id=Cattle_Y_G00816;transcript_id=Cattle_Y_T01521;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48073556	48075802	.	-	.	ID=Cattle_Y_G00817;Dbxref=GeneID:132344602;Name=LOC132344602;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344602;gene_biotype=protein_coding;gene_id=Cattle_Y_G00817;source_id=gene-LOC132344602
haplotype2-0000357	CAT	mRNA	48073556	48075802	.	-	.	ID=Cattle_Y_T01522;Parent=Cattle_Y_G00817;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;Name=XM_059884268.1;gbkey=mRNA;gene=LOC132344602;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01522;gene_id=Cattle_Y_G00817;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884268.1
haplotype2-0000357	CAT	exon	48073556	48073633	.	-	.	ID=Cattle_Y_E02330;Parent=Cattle_Y_T01522;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01522;gene_id=Cattle_Y_G00817;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	48073750	48073895	.	-	.	ID=Cattle_Y_E02331;Parent=Cattle_Y_T01522;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01522;gene_id=Cattle_Y_G00817;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-5
haplotype2-0000357	CAT	exon	48073991	48074102	.	-	.	ID=Cattle_Y_E02332;Parent=Cattle_Y_T01522;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01522;gene_id=Cattle_Y_G00817;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-4
haplotype2-0000357	CAT	exon	48074286	48074363	.	-	.	ID=Cattle_Y_E02333;Parent=Cattle_Y_T01522;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01522;gene_id=Cattle_Y_G00817;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-3
haplotype2-0000357	CAT	exon	48075167	48075582	.	-	.	ID=Cattle_Y_E02334;Parent=Cattle_Y_T01522;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01522;gene_id=Cattle_Y_G00817;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-2
haplotype2-0000357	CAT	exon	48075679	48075802	.	-	.	ID=Cattle_Y_E02335;Parent=Cattle_Y_T01522;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01522;gene_id=Cattle_Y_G00817;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-1
haplotype2-0000357	CAT	CDS	48073556	48073633	.	-	0	ID=Cattle_Y_C01940;Parent=Cattle_Y_T01522;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_2;gene_id=Cattle_Y_G00817;transcript_id=Cattle_Y_T01522;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48073750	48073895	.	-	2	ID=Cattle_Y_C01941;Parent=Cattle_Y_T01522;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_2;gene_id=Cattle_Y_G00817;transcript_id=Cattle_Y_T01522;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48073991	48074102	.	-	0	ID=Cattle_Y_C01942;Parent=Cattle_Y_T01522;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_2;gene_id=Cattle_Y_G00817;transcript_id=Cattle_Y_T01522;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48074286	48074363	.	-	0	ID=Cattle_Y_C01943;Parent=Cattle_Y_T01522;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_2;gene_id=Cattle_Y_G00817;transcript_id=Cattle_Y_T01522;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48075167	48075582	.	-	2	ID=Cattle_Y_C01944;Parent=Cattle_Y_T01522;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_2;gene_id=Cattle_Y_G00817;transcript_id=Cattle_Y_T01522;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48075679	48075802	.	-	0	ID=Cattle_Y_C01945;Parent=Cattle_Y_T01522;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_2;gene_id=Cattle_Y_G00817;transcript_id=Cattle_Y_T01522;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48081093	48083339	1648	-	.	ID=Cattle_Y_G00818;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00818;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48081093	48083339	1648	-	.	ID=Cattle_Y_T01523;Parent=Cattle_Y_G00818;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01523;gene_id=Cattle_Y_G00818;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48081093	48081170	132	-	0	ID=Cattle_Y_E02336;Parent=Cattle_Y_T01523;gene_id=Cattle_Y_G00818;transcript_id=Cattle_Y_T01523;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48081287	48081432	270	-	2	ID=Cattle_Y_E02337;Parent=Cattle_Y_T01523;gene_id=Cattle_Y_G00818;transcript_id=Cattle_Y_T01523;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48081528	48081639	203	-	0	ID=Cattle_Y_E02338;Parent=Cattle_Y_T01523;gene_id=Cattle_Y_G00818;transcript_id=Cattle_Y_T01523;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48081823	48081900	133	-	0	ID=Cattle_Y_E02339;Parent=Cattle_Y_T01523;gene_id=Cattle_Y_G00818;transcript_id=Cattle_Y_T01523;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48082704	48083119	692	-	2	ID=Cattle_Y_E02340;Parent=Cattle_Y_T01523;gene_id=Cattle_Y_G00818;transcript_id=Cattle_Y_T01523;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48083216	48083339	218	-	0	ID=Cattle_Y_E02341;Parent=Cattle_Y_T01523;gene_id=Cattle_Y_G00818;transcript_id=Cattle_Y_T01523;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48081093	48081170	132	-	0	ID=Cattle_Y_C01946;Parent=Cattle_Y_T01523;gene_id=Cattle_Y_G00818;transcript_id=Cattle_Y_T01523;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48081287	48081432	270	-	2	ID=Cattle_Y_C01947;Parent=Cattle_Y_T01523;gene_id=Cattle_Y_G00818;transcript_id=Cattle_Y_T01523;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48081528	48081639	203	-	0	ID=Cattle_Y_C01948;Parent=Cattle_Y_T01523;gene_id=Cattle_Y_G00818;transcript_id=Cattle_Y_T01523;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48081823	48081900	133	-	0	ID=Cattle_Y_C01949;Parent=Cattle_Y_T01523;gene_id=Cattle_Y_G00818;transcript_id=Cattle_Y_T01523;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48082704	48083119	692	-	2	ID=Cattle_Y_C01950;Parent=Cattle_Y_T01523;gene_id=Cattle_Y_G00818;transcript_id=Cattle_Y_T01523;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48083216	48083339	218	-	0	ID=Cattle_Y_C01951;Parent=Cattle_Y_T01523;gene_id=Cattle_Y_G00818;transcript_id=Cattle_Y_T01523;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48096171	48098417	1651	-	.	ID=Cattle_Y_G00819;Dbxref=GeneID:132344602;Name=LOC132344602;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344602;gene_biotype=protein_coding;gene_id=Cattle_Y_G00819;source_id=gene-LOC132344602
haplotype2-0000357	CAT	mRNA	48096171	48098417	1651	-	.	ID=Cattle_Y_T01524;Parent=Cattle_Y_G00819;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;Name=XM_059884268.1;gbkey=mRNA;gene=LOC132344602;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01524;gene_id=Cattle_Y_G00819;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884268.1
haplotype2-0000357	CAT	exon	48096171	48096248	136	-	0	ID=Cattle_Y_E02342;Parent=Cattle_Y_T01524;gene_id=Cattle_Y_G00819;transcript_id=Cattle_Y_T01524;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48096365	48096510	270	-	2	ID=Cattle_Y_E02343;Parent=Cattle_Y_T01524;gene_id=Cattle_Y_G00819;transcript_id=Cattle_Y_T01524;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48096606	48096717	202	-	0	ID=Cattle_Y_E02344;Parent=Cattle_Y_T01524;gene_id=Cattle_Y_G00819;transcript_id=Cattle_Y_T01524;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48096901	48096978	133	-	0	ID=Cattle_Y_E02345;Parent=Cattle_Y_T01524;gene_id=Cattle_Y_G00819;transcript_id=Cattle_Y_T01524;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48097782	48098197	692	-	2	ID=Cattle_Y_E02346;Parent=Cattle_Y_T01524;gene_id=Cattle_Y_G00819;transcript_id=Cattle_Y_T01524;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48098294	48098417	218	-	0	ID=Cattle_Y_E02347;Parent=Cattle_Y_T01524;gene_id=Cattle_Y_G00819;transcript_id=Cattle_Y_T01524;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48096171	48096248	136	-	0	ID=Cattle_Y_C01952;Parent=Cattle_Y_T01524;gene_id=Cattle_Y_G00819;transcript_id=Cattle_Y_T01524;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48096365	48096510	270	-	2	ID=Cattle_Y_C01953;Parent=Cattle_Y_T01524;gene_id=Cattle_Y_G00819;transcript_id=Cattle_Y_T01524;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48096606	48096717	202	-	0	ID=Cattle_Y_C01954;Parent=Cattle_Y_T01524;gene_id=Cattle_Y_G00819;transcript_id=Cattle_Y_T01524;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48096901	48096978	133	-	0	ID=Cattle_Y_C01955;Parent=Cattle_Y_T01524;gene_id=Cattle_Y_G00819;transcript_id=Cattle_Y_T01524;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48097782	48098197	692	-	2	ID=Cattle_Y_C01956;Parent=Cattle_Y_T01524;gene_id=Cattle_Y_G00819;transcript_id=Cattle_Y_T01524;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48098294	48098417	218	-	0	ID=Cattle_Y_C01957;Parent=Cattle_Y_T01524;gene_id=Cattle_Y_G00819;transcript_id=Cattle_Y_T01524;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48103708	48105954	.	-	.	ID=Cattle_Y_G00820;Dbxref=GeneID:132344613;Name=LOC132344613;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344613;gene_biotype=protein_coding;gene_id=Cattle_Y_G00820;source_id=gene-LOC132344613
haplotype2-0000357	CAT	mRNA	48103708	48105954	.	-	.	ID=Cattle_Y_T01525;Parent=Cattle_Y_G00820;Dbxref=GeneID:132344613,GenBank:XM_059884279.1;Name=XM_059884279.1;gbkey=mRNA;gene=LOC132344613;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01525;gene_id=Cattle_Y_G00820;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884279.1
haplotype2-0000357	CAT	exon	48103708	48103785	.	-	.	ID=Cattle_Y_E02348;Parent=Cattle_Y_T01525;Dbxref=GeneID:132344613,GenBank:XM_059884279.1;gbkey=mRNA;gene=LOC132344613;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01525;gene_id=Cattle_Y_G00820;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884279.1-6
haplotype2-0000357	CAT	exon	48103902	48104047	.	-	.	ID=Cattle_Y_E02349;Parent=Cattle_Y_T01525;Dbxref=GeneID:132344613,GenBank:XM_059884279.1;gbkey=mRNA;gene=LOC132344613;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01525;gene_id=Cattle_Y_G00820;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884279.1-5
haplotype2-0000357	CAT	exon	48104143	48104254	.	-	.	ID=Cattle_Y_E02350;Parent=Cattle_Y_T01525;Dbxref=GeneID:132344613,GenBank:XM_059884279.1;gbkey=mRNA;gene=LOC132344613;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01525;gene_id=Cattle_Y_G00820;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884279.1-4
haplotype2-0000357	CAT	exon	48104438	48104515	.	-	.	ID=Cattle_Y_E02351;Parent=Cattle_Y_T01525;Dbxref=GeneID:132344613,GenBank:XM_059884279.1;gbkey=mRNA;gene=LOC132344613;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01525;gene_id=Cattle_Y_G00820;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884279.1-3
haplotype2-0000357	CAT	exon	48105319	48105734	.	-	.	ID=Cattle_Y_E02352;Parent=Cattle_Y_T01525;Dbxref=GeneID:132344613,GenBank:XM_059884279.1;gbkey=mRNA;gene=LOC132344613;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01525;gene_id=Cattle_Y_G00820;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884279.1-2
haplotype2-0000357	CAT	exon	48105831	48105954	.	-	.	ID=Cattle_Y_E02353;Parent=Cattle_Y_T01525;Dbxref=GeneID:132344613,GenBank:XM_059884279.1;gbkey=mRNA;gene=LOC132344613;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01525;gene_id=Cattle_Y_G00820;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884279.1-1
haplotype2-0000357	CAT	CDS	48103708	48103785	.	-	0	ID=Cattle_Y_C01958;Parent=Cattle_Y_T01525;Dbxref=GeneID:132344613,GenBank:XP_059740262.1;Name=XP_059740262.1;gbkey=CDS;gene=LOC132344613;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740262.1_1;gene_id=Cattle_Y_G00820;transcript_id=Cattle_Y_T01525;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48103902	48104047	.	-	2	ID=Cattle_Y_C01959;Parent=Cattle_Y_T01525;Dbxref=GeneID:132344613,GenBank:XP_059740262.1;Name=XP_059740262.1;gbkey=CDS;gene=LOC132344613;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740262.1_1;gene_id=Cattle_Y_G00820;transcript_id=Cattle_Y_T01525;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48104143	48104254	.	-	0	ID=Cattle_Y_C01960;Parent=Cattle_Y_T01525;Dbxref=GeneID:132344613,GenBank:XP_059740262.1;Name=XP_059740262.1;gbkey=CDS;gene=LOC132344613;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740262.1_1;gene_id=Cattle_Y_G00820;transcript_id=Cattle_Y_T01525;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48104438	48104515	.	-	0	ID=Cattle_Y_C01961;Parent=Cattle_Y_T01525;Dbxref=GeneID:132344613,GenBank:XP_059740262.1;Name=XP_059740262.1;gbkey=CDS;gene=LOC132344613;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740262.1_1;gene_id=Cattle_Y_G00820;transcript_id=Cattle_Y_T01525;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48105319	48105734	.	-	2	ID=Cattle_Y_C01962;Parent=Cattle_Y_T01525;Dbxref=GeneID:132344613,GenBank:XP_059740262.1;Name=XP_059740262.1;gbkey=CDS;gene=LOC132344613;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740262.1_1;gene_id=Cattle_Y_G00820;transcript_id=Cattle_Y_T01525;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48105831	48105954	.	-	0	ID=Cattle_Y_C01963;Parent=Cattle_Y_T01525;Dbxref=GeneID:132344613,GenBank:XP_059740262.1;Name=XP_059740262.1;gbkey=CDS;gene=LOC132344613;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740262.1_1;gene_id=Cattle_Y_G00820;transcript_id=Cattle_Y_T01525;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48111247	48113493	.	-	.	ID=Cattle_Y_G00821;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00821;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48111247	48113493	.	-	.	ID=Cattle_Y_T01526;Parent=Cattle_Y_G00821;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01526;gene_id=Cattle_Y_G00821;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48111247	48111324	.	-	.	ID=Cattle_Y_E02354;Parent=Cattle_Y_T01526;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01526;gene_id=Cattle_Y_G00821;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48111441	48111586	.	-	.	ID=Cattle_Y_E02355;Parent=Cattle_Y_T01526;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01526;gene_id=Cattle_Y_G00821;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48111682	48111793	.	-	.	ID=Cattle_Y_E02356;Parent=Cattle_Y_T01526;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01526;gene_id=Cattle_Y_G00821;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48111977	48112054	.	-	.	ID=Cattle_Y_E02357;Parent=Cattle_Y_T01526;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01526;gene_id=Cattle_Y_G00821;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48112858	48113273	.	-	.	ID=Cattle_Y_E02358;Parent=Cattle_Y_T01526;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01526;gene_id=Cattle_Y_G00821;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48113370	48113493	.	-	.	ID=Cattle_Y_E02359;Parent=Cattle_Y_T01526;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01526;gene_id=Cattle_Y_G00821;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48111247	48111324	.	-	0	ID=Cattle_Y_C01964;Parent=Cattle_Y_T01526;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_27;gene_id=Cattle_Y_G00821;transcript_id=Cattle_Y_T01526;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48111441	48111586	.	-	2	ID=Cattle_Y_C01965;Parent=Cattle_Y_T01526;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_27;gene_id=Cattle_Y_G00821;transcript_id=Cattle_Y_T01526;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48111682	48111793	.	-	0	ID=Cattle_Y_C01966;Parent=Cattle_Y_T01526;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_27;gene_id=Cattle_Y_G00821;transcript_id=Cattle_Y_T01526;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48111977	48112054	.	-	0	ID=Cattle_Y_C01967;Parent=Cattle_Y_T01526;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_27;gene_id=Cattle_Y_G00821;transcript_id=Cattle_Y_T01526;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48112858	48113273	.	-	2	ID=Cattle_Y_C01968;Parent=Cattle_Y_T01526;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_27;gene_id=Cattle_Y_G00821;transcript_id=Cattle_Y_T01526;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48113370	48113493	.	-	0	ID=Cattle_Y_C01969;Parent=Cattle_Y_T01526;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_27;gene_id=Cattle_Y_G00821;transcript_id=Cattle_Y_T01526;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48118785	48121025	.	-	.	ID=Cattle_Y_G00822;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00822;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48118785	48121025	.	-	.	ID=Cattle_Y_T01527;Parent=Cattle_Y_G00822;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01527;gene_id=Cattle_Y_G00822;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48118785	48118862	.	-	.	ID=Cattle_Y_E02360;Parent=Cattle_Y_T01527;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01527;gene_id=Cattle_Y_G00822;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48118979	48119124	.	-	.	ID=Cattle_Y_E02361;Parent=Cattle_Y_T01527;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01527;gene_id=Cattle_Y_G00822;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48119220	48119331	.	-	.	ID=Cattle_Y_E02362;Parent=Cattle_Y_T01527;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01527;gene_id=Cattle_Y_G00822;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48119515	48119592	.	-	.	ID=Cattle_Y_E02363;Parent=Cattle_Y_T01527;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01527;gene_id=Cattle_Y_G00822;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48120390	48120805	.	-	.	ID=Cattle_Y_E02364;Parent=Cattle_Y_T01527;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01527;gene_id=Cattle_Y_G00822;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48120902	48121025	.	-	.	ID=Cattle_Y_E02365;Parent=Cattle_Y_T01527;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01527;gene_id=Cattle_Y_G00822;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48118785	48118862	.	-	0	ID=Cattle_Y_C01970;Parent=Cattle_Y_T01527;gene_id=Cattle_Y_G00822;transcript_id=Cattle_Y_T01527;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48118979	48119124	.	-	2	ID=Cattle_Y_C01971;Parent=Cattle_Y_T01527;gene_id=Cattle_Y_G00822;transcript_id=Cattle_Y_T01527;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48119220	48119331	.	-	0	ID=Cattle_Y_C01972;Parent=Cattle_Y_T01527;gene_id=Cattle_Y_G00822;transcript_id=Cattle_Y_T01527;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48119515	48119592	.	-	0	ID=Cattle_Y_C01973;Parent=Cattle_Y_T01527;gene_id=Cattle_Y_G00822;transcript_id=Cattle_Y_T01527;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48120390	48120805	.	-	2	ID=Cattle_Y_C01974;Parent=Cattle_Y_T01527;gene_id=Cattle_Y_G00822;transcript_id=Cattle_Y_T01527;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48120902	48121025	.	-	0	ID=Cattle_Y_C01975;Parent=Cattle_Y_T01527;gene_id=Cattle_Y_G00822;transcript_id=Cattle_Y_T01527;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48126316	48128448	.	-	.	ID=Cattle_Y_G00823;Dbxref=GeneID:132344587;Name=LOC132344587;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344587;gene_biotype=protein_coding;partial=true;start_range=.,9435132;gene_id=Cattle_Y_G00823;source_id=gene-LOC132344587
haplotype2-0000357	CAT	mRNA	48126316	48128448	.	-	.	ID=Cattle_Y_T01528;Parent=Cattle_Y_G00823;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;Name=XM_059884253.1;gbkey=mRNA;gene=LOC132344587;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9435132;transcript_id=Cattle_Y_T01528;gene_id=Cattle_Y_G00823;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884253.1
haplotype2-0000357	CAT	exon	48126316	48126393	.	-	.	ID=Cattle_Y_E02366;Parent=Cattle_Y_T01528;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01528;gene_id=Cattle_Y_G00823;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-6
haplotype2-0000357	CAT	exon	48126510	48126655	.	-	.	ID=Cattle_Y_E02367;Parent=Cattle_Y_T01528;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01528;gene_id=Cattle_Y_G00823;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-5
haplotype2-0000357	CAT	exon	48126751	48126862	.	-	.	ID=Cattle_Y_E02368;Parent=Cattle_Y_T01528;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01528;gene_id=Cattle_Y_G00823;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-4
haplotype2-0000357	CAT	exon	48127046	48127123	.	-	.	ID=Cattle_Y_E02369;Parent=Cattle_Y_T01528;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01528;gene_id=Cattle_Y_G00823;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-3
haplotype2-0000357	CAT	exon	48127921	48128336	.	-	.	ID=Cattle_Y_E02370;Parent=Cattle_Y_T01528;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01528;gene_id=Cattle_Y_G00823;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-2
haplotype2-0000357	CAT	exon	48128433	48128448	.	-	.	ID=Cattle_Y_E02371;Parent=Cattle_Y_T01528;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9435132;transcript_id=Cattle_Y_T01528;gene_id=Cattle_Y_G00823;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-1
haplotype2-0000357	CAT	CDS	48126316	48126393	.	-	0	ID=Cattle_Y_C01976;Parent=Cattle_Y_T01528;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_2;gene_id=Cattle_Y_G00823;transcript_id=Cattle_Y_T01528;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48126510	48126655	.	-	2	ID=Cattle_Y_C01977;Parent=Cattle_Y_T01528;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_2;gene_id=Cattle_Y_G00823;transcript_id=Cattle_Y_T01528;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48126751	48126862	.	-	0	ID=Cattle_Y_C01978;Parent=Cattle_Y_T01528;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_2;gene_id=Cattle_Y_G00823;transcript_id=Cattle_Y_T01528;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48127046	48127123	.	-	0	ID=Cattle_Y_C01979;Parent=Cattle_Y_T01528;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_2;gene_id=Cattle_Y_G00823;transcript_id=Cattle_Y_T01528;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48127921	48128336	.	-	2	ID=Cattle_Y_C01980;Parent=Cattle_Y_T01528;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_2;gene_id=Cattle_Y_G00823;transcript_id=Cattle_Y_T01528;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48128433	48128448	.	-	0	ID=Cattle_Y_C01981;Parent=Cattle_Y_T01528;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_2;start_range=.,9435132;gene_id=Cattle_Y_G00823;transcript_id=Cattle_Y_T01528;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48133847	48136087	.	-	.	ID=Cattle_Y_G00824;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00824;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48133847	48136087	.	-	.	ID=Cattle_Y_T01529;Parent=Cattle_Y_G00824;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01529;gene_id=Cattle_Y_G00824;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48133847	48133924	.	-	.	ID=Cattle_Y_E02372;Parent=Cattle_Y_T01529;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01529;gene_id=Cattle_Y_G00824;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48134041	48134186	.	-	.	ID=Cattle_Y_E02373;Parent=Cattle_Y_T01529;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01529;gene_id=Cattle_Y_G00824;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48134282	48134393	.	-	.	ID=Cattle_Y_E02374;Parent=Cattle_Y_T01529;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01529;gene_id=Cattle_Y_G00824;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48134577	48134654	.	-	.	ID=Cattle_Y_E02375;Parent=Cattle_Y_T01529;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01529;gene_id=Cattle_Y_G00824;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48135452	48135867	.	-	.	ID=Cattle_Y_E02376;Parent=Cattle_Y_T01529;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01529;gene_id=Cattle_Y_G00824;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48135964	48136087	.	-	.	ID=Cattle_Y_E02377;Parent=Cattle_Y_T01529;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01529;gene_id=Cattle_Y_G00824;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48133847	48133924	.	-	0	ID=Cattle_Y_C01982;Parent=Cattle_Y_T01529;gene_id=Cattle_Y_G00824;transcript_id=Cattle_Y_T01529;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48134041	48134186	.	-	2	ID=Cattle_Y_C01983;Parent=Cattle_Y_T01529;gene_id=Cattle_Y_G00824;transcript_id=Cattle_Y_T01529;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48134282	48134393	.	-	0	ID=Cattle_Y_C01984;Parent=Cattle_Y_T01529;gene_id=Cattle_Y_G00824;transcript_id=Cattle_Y_T01529;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48134577	48134654	.	-	0	ID=Cattle_Y_C01985;Parent=Cattle_Y_T01529;gene_id=Cattle_Y_G00824;transcript_id=Cattle_Y_T01529;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48135452	48135867	.	-	2	ID=Cattle_Y_C01986;Parent=Cattle_Y_T01529;gene_id=Cattle_Y_G00824;transcript_id=Cattle_Y_T01529;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48135964	48136087	.	-	0	ID=Cattle_Y_C01987;Parent=Cattle_Y_T01529;gene_id=Cattle_Y_G00824;transcript_id=Cattle_Y_T01529;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48141379	48143516	.	-	.	ID=Cattle_Y_G00825;Dbxref=GeneID:132344587;Name=LOC132344587;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344587;gene_biotype=protein_coding;partial=true;start_range=.,9435132;gene_id=Cattle_Y_G00825;source_id=gene-LOC132344587
haplotype2-0000357	CAT	mRNA	48141379	48143516	.	-	.	ID=Cattle_Y_T01530;Parent=Cattle_Y_G00825;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;Name=XM_059884253.1;gbkey=mRNA;gene=LOC132344587;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9435132;transcript_id=Cattle_Y_T01530;gene_id=Cattle_Y_G00825;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884253.1
haplotype2-0000357	CAT	exon	48141379	48141456	.	-	.	ID=Cattle_Y_E02378;Parent=Cattle_Y_T01530;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01530;gene_id=Cattle_Y_G00825;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-6
haplotype2-0000357	CAT	exon	48141573	48141718	.	-	.	ID=Cattle_Y_E02379;Parent=Cattle_Y_T01530;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01530;gene_id=Cattle_Y_G00825;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-5
haplotype2-0000357	CAT	exon	48141814	48141925	.	-	.	ID=Cattle_Y_E02380;Parent=Cattle_Y_T01530;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01530;gene_id=Cattle_Y_G00825;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-4
haplotype2-0000357	CAT	exon	48142109	48142186	.	-	.	ID=Cattle_Y_E02381;Parent=Cattle_Y_T01530;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01530;gene_id=Cattle_Y_G00825;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-3
haplotype2-0000357	CAT	exon	48142990	48143405	.	-	.	ID=Cattle_Y_E02382;Parent=Cattle_Y_T01530;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01530;gene_id=Cattle_Y_G00825;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-2
haplotype2-0000357	CAT	exon	48143501	48143516	.	-	.	ID=Cattle_Y_E02383;Parent=Cattle_Y_T01530;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9435132;transcript_id=Cattle_Y_T01530;gene_id=Cattle_Y_G00825;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-1
haplotype2-0000357	CAT	CDS	48141379	48141456	.	-	0	ID=Cattle_Y_C01988;Parent=Cattle_Y_T01530;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_4;gene_id=Cattle_Y_G00825;transcript_id=Cattle_Y_T01530;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48141573	48141718	.	-	2	ID=Cattle_Y_C01989;Parent=Cattle_Y_T01530;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_4;gene_id=Cattle_Y_G00825;transcript_id=Cattle_Y_T01530;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48141814	48141925	.	-	0	ID=Cattle_Y_C01990;Parent=Cattle_Y_T01530;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_4;gene_id=Cattle_Y_G00825;transcript_id=Cattle_Y_T01530;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48142109	48142186	.	-	0	ID=Cattle_Y_C01991;Parent=Cattle_Y_T01530;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_4;gene_id=Cattle_Y_G00825;transcript_id=Cattle_Y_T01530;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48142990	48143405	.	-	2	ID=Cattle_Y_C01992;Parent=Cattle_Y_T01530;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_4;gene_id=Cattle_Y_G00825;transcript_id=Cattle_Y_T01530;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48143501	48143516	.	-	0	ID=Cattle_Y_C01993;Parent=Cattle_Y_T01530;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_4;start_range=.,9435132;gene_id=Cattle_Y_G00825;transcript_id=Cattle_Y_T01530;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48148918	48151164	.	-	.	ID=Cattle_Y_G00826;Dbxref=GeneID:132344602;Name=LOC132344602;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344602;gene_biotype=protein_coding;gene_id=Cattle_Y_G00826;source_id=gene-LOC132344602
haplotype2-0000357	CAT	mRNA	48148918	48151164	.	-	.	ID=Cattle_Y_T01531;Parent=Cattle_Y_G00826;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;Name=XM_059884268.1;gbkey=mRNA;gene=LOC132344602;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01531;gene_id=Cattle_Y_G00826;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884268.1
haplotype2-0000357	CAT	exon	48148918	48148995	.	-	.	ID=Cattle_Y_E02384;Parent=Cattle_Y_T01531;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01531;gene_id=Cattle_Y_G00826;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	48149112	48149257	.	-	.	ID=Cattle_Y_E02385;Parent=Cattle_Y_T01531;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01531;gene_id=Cattle_Y_G00826;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-5
haplotype2-0000357	CAT	exon	48149353	48149464	.	-	.	ID=Cattle_Y_E02386;Parent=Cattle_Y_T01531;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01531;gene_id=Cattle_Y_G00826;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-4
haplotype2-0000357	CAT	exon	48149648	48149725	.	-	.	ID=Cattle_Y_E02387;Parent=Cattle_Y_T01531;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01531;gene_id=Cattle_Y_G00826;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-3
haplotype2-0000357	CAT	exon	48150529	48150944	.	-	.	ID=Cattle_Y_E02388;Parent=Cattle_Y_T01531;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01531;gene_id=Cattle_Y_G00826;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-2
haplotype2-0000357	CAT	exon	48151041	48151164	.	-	.	ID=Cattle_Y_E02389;Parent=Cattle_Y_T01531;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01531;gene_id=Cattle_Y_G00826;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-1
haplotype2-0000357	CAT	CDS	48148918	48148995	.	-	0	ID=Cattle_Y_C01994;Parent=Cattle_Y_T01531;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_3;gene_id=Cattle_Y_G00826;transcript_id=Cattle_Y_T01531;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48149112	48149257	.	-	2	ID=Cattle_Y_C01995;Parent=Cattle_Y_T01531;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_3;gene_id=Cattle_Y_G00826;transcript_id=Cattle_Y_T01531;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48149353	48149464	.	-	0	ID=Cattle_Y_C01996;Parent=Cattle_Y_T01531;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_3;gene_id=Cattle_Y_G00826;transcript_id=Cattle_Y_T01531;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48149648	48149725	.	-	0	ID=Cattle_Y_C01997;Parent=Cattle_Y_T01531;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_3;gene_id=Cattle_Y_G00826;transcript_id=Cattle_Y_T01531;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48150529	48150944	.	-	2	ID=Cattle_Y_C01998;Parent=Cattle_Y_T01531;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_3;gene_id=Cattle_Y_G00826;transcript_id=Cattle_Y_T01531;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48151041	48151164	.	-	0	ID=Cattle_Y_C01999;Parent=Cattle_Y_T01531;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_3;gene_id=Cattle_Y_G00826;transcript_id=Cattle_Y_T01531;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48156457	48158703	.	-	.	ID=Cattle_Y_G00827;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00827;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48156457	48158703	.	-	.	ID=Cattle_Y_T01532;Parent=Cattle_Y_G00827;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01532;gene_id=Cattle_Y_G00827;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48156457	48156534	.	-	.	ID=Cattle_Y_E02390;Parent=Cattle_Y_T01532;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01532;gene_id=Cattle_Y_G00827;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48156651	48156796	.	-	.	ID=Cattle_Y_E02391;Parent=Cattle_Y_T01532;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01532;gene_id=Cattle_Y_G00827;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48156892	48157003	.	-	.	ID=Cattle_Y_E02392;Parent=Cattle_Y_T01532;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01532;gene_id=Cattle_Y_G00827;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48157187	48157264	.	-	.	ID=Cattle_Y_E02393;Parent=Cattle_Y_T01532;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01532;gene_id=Cattle_Y_G00827;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48158068	48158483	.	-	.	ID=Cattle_Y_E02394;Parent=Cattle_Y_T01532;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01532;gene_id=Cattle_Y_G00827;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48158580	48158703	.	-	.	ID=Cattle_Y_E02395;Parent=Cattle_Y_T01532;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01532;gene_id=Cattle_Y_G00827;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48156457	48156534	.	-	0	ID=Cattle_Y_C02000;Parent=Cattle_Y_T01532;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_7;gene_id=Cattle_Y_G00827;transcript_id=Cattle_Y_T01532;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48156651	48156796	.	-	2	ID=Cattle_Y_C02001;Parent=Cattle_Y_T01532;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_7;gene_id=Cattle_Y_G00827;transcript_id=Cattle_Y_T01532;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48156892	48157003	.	-	0	ID=Cattle_Y_C02002;Parent=Cattle_Y_T01532;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_7;gene_id=Cattle_Y_G00827;transcript_id=Cattle_Y_T01532;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48157187	48157264	.	-	0	ID=Cattle_Y_C02003;Parent=Cattle_Y_T01532;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_7;gene_id=Cattle_Y_G00827;transcript_id=Cattle_Y_T01532;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48158068	48158483	.	-	2	ID=Cattle_Y_C02004;Parent=Cattle_Y_T01532;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_7;gene_id=Cattle_Y_G00827;transcript_id=Cattle_Y_T01532;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48158580	48158703	.	-	0	ID=Cattle_Y_C02005;Parent=Cattle_Y_T01532;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_7;gene_id=Cattle_Y_G00827;transcript_id=Cattle_Y_T01532;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48163995	48166241	.	-	.	ID=Cattle_Y_G00828;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00828;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48163995	48166241	.	-	.	ID=Cattle_Y_T01533;Parent=Cattle_Y_G00828;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01533;gene_id=Cattle_Y_G00828;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48163995	48164072	.	-	.	ID=Cattle_Y_E02396;Parent=Cattle_Y_T01533;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01533;gene_id=Cattle_Y_G00828;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48164189	48164334	.	-	.	ID=Cattle_Y_E02397;Parent=Cattle_Y_T01533;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01533;gene_id=Cattle_Y_G00828;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48164430	48164541	.	-	.	ID=Cattle_Y_E02398;Parent=Cattle_Y_T01533;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01533;gene_id=Cattle_Y_G00828;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48164725	48164802	.	-	.	ID=Cattle_Y_E02399;Parent=Cattle_Y_T01533;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01533;gene_id=Cattle_Y_G00828;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48165606	48166021	.	-	.	ID=Cattle_Y_E02400;Parent=Cattle_Y_T01533;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01533;gene_id=Cattle_Y_G00828;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48166118	48166241	.	-	.	ID=Cattle_Y_E02401;Parent=Cattle_Y_T01533;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01533;gene_id=Cattle_Y_G00828;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48163995	48164072	.	-	0	ID=Cattle_Y_C02006;Parent=Cattle_Y_T01533;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_30;gene_id=Cattle_Y_G00828;transcript_id=Cattle_Y_T01533;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48164189	48164334	.	-	2	ID=Cattle_Y_C02007;Parent=Cattle_Y_T01533;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_30;gene_id=Cattle_Y_G00828;transcript_id=Cattle_Y_T01533;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48164430	48164541	.	-	0	ID=Cattle_Y_C02008;Parent=Cattle_Y_T01533;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_30;gene_id=Cattle_Y_G00828;transcript_id=Cattle_Y_T01533;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48164725	48164802	.	-	0	ID=Cattle_Y_C02009;Parent=Cattle_Y_T01533;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_30;gene_id=Cattle_Y_G00828;transcript_id=Cattle_Y_T01533;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48165606	48166021	.	-	2	ID=Cattle_Y_C02010;Parent=Cattle_Y_T01533;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_30;gene_id=Cattle_Y_G00828;transcript_id=Cattle_Y_T01533;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48166118	48166241	.	-	0	ID=Cattle_Y_C02011;Parent=Cattle_Y_T01533;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_30;gene_id=Cattle_Y_G00828;transcript_id=Cattle_Y_T01533;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48171531	48173777	.	-	.	ID=Cattle_Y_G00829;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00829;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48171531	48173777	.	-	.	ID=Cattle_Y_T01534;Parent=Cattle_Y_G00829;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01534;gene_id=Cattle_Y_G00829;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48171531	48171608	.	-	.	ID=Cattle_Y_E02402;Parent=Cattle_Y_T01534;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01534;gene_id=Cattle_Y_G00829;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48171725	48171870	.	-	.	ID=Cattle_Y_E02403;Parent=Cattle_Y_T01534;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01534;gene_id=Cattle_Y_G00829;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48171966	48172077	.	-	.	ID=Cattle_Y_E02404;Parent=Cattle_Y_T01534;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01534;gene_id=Cattle_Y_G00829;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48172261	48172338	.	-	.	ID=Cattle_Y_E02405;Parent=Cattle_Y_T01534;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01534;gene_id=Cattle_Y_G00829;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48173142	48173557	.	-	.	ID=Cattle_Y_E02406;Parent=Cattle_Y_T01534;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01534;gene_id=Cattle_Y_G00829;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48173654	48173777	.	-	.	ID=Cattle_Y_E02407;Parent=Cattle_Y_T01534;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01534;gene_id=Cattle_Y_G00829;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48171531	48171608	.	-	0	ID=Cattle_Y_C02012;Parent=Cattle_Y_T01534;gene_id=Cattle_Y_G00829;transcript_id=Cattle_Y_T01534;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48171725	48171870	.	-	2	ID=Cattle_Y_C02013;Parent=Cattle_Y_T01534;gene_id=Cattle_Y_G00829;transcript_id=Cattle_Y_T01534;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48171966	48172077	.	-	0	ID=Cattle_Y_C02014;Parent=Cattle_Y_T01534;gene_id=Cattle_Y_G00829;transcript_id=Cattle_Y_T01534;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48172261	48172338	.	-	0	ID=Cattle_Y_C02015;Parent=Cattle_Y_T01534;gene_id=Cattle_Y_G00829;transcript_id=Cattle_Y_T01534;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48173142	48173557	.	-	2	ID=Cattle_Y_C02016;Parent=Cattle_Y_T01534;gene_id=Cattle_Y_G00829;transcript_id=Cattle_Y_T01534;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48173654	48173777	.	-	0	ID=Cattle_Y_C02017;Parent=Cattle_Y_T01534;gene_id=Cattle_Y_G00829;transcript_id=Cattle_Y_T01534;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48179069	48181315	.	-	.	ID=Cattle_Y_G00830;Dbxref=GeneID:132344602;Name=LOC132344602;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344602;gene_biotype=protein_coding;gene_id=Cattle_Y_G00830;source_id=gene-LOC132344602
haplotype2-0000357	CAT	mRNA	48179069	48181315	.	-	.	ID=Cattle_Y_T01535;Parent=Cattle_Y_G00830;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;Name=XM_059884268.1;gbkey=mRNA;gene=LOC132344602;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01535;gene_id=Cattle_Y_G00830;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884268.1
haplotype2-0000357	CAT	exon	48179069	48179146	.	-	.	ID=Cattle_Y_E02408;Parent=Cattle_Y_T01535;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01535;gene_id=Cattle_Y_G00830;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	48179263	48179408	.	-	.	ID=Cattle_Y_E02409;Parent=Cattle_Y_T01535;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01535;gene_id=Cattle_Y_G00830;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-5
haplotype2-0000357	CAT	exon	48179504	48179615	.	-	.	ID=Cattle_Y_E02410;Parent=Cattle_Y_T01535;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01535;gene_id=Cattle_Y_G00830;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-4
haplotype2-0000357	CAT	exon	48179799	48179876	.	-	.	ID=Cattle_Y_E02411;Parent=Cattle_Y_T01535;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01535;gene_id=Cattle_Y_G00830;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-3
haplotype2-0000357	CAT	exon	48180680	48181095	.	-	.	ID=Cattle_Y_E02412;Parent=Cattle_Y_T01535;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01535;gene_id=Cattle_Y_G00830;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-2
haplotype2-0000357	CAT	exon	48181192	48181315	.	-	.	ID=Cattle_Y_E02413;Parent=Cattle_Y_T01535;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01535;gene_id=Cattle_Y_G00830;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-1
haplotype2-0000357	CAT	CDS	48179069	48179146	.	-	0	ID=Cattle_Y_C02018;Parent=Cattle_Y_T01535;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_7;gene_id=Cattle_Y_G00830;transcript_id=Cattle_Y_T01535;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48179263	48179408	.	-	2	ID=Cattle_Y_C02019;Parent=Cattle_Y_T01535;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_7;gene_id=Cattle_Y_G00830;transcript_id=Cattle_Y_T01535;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48179504	48179615	.	-	0	ID=Cattle_Y_C02020;Parent=Cattle_Y_T01535;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_7;gene_id=Cattle_Y_G00830;transcript_id=Cattle_Y_T01535;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48179799	48179876	.	-	0	ID=Cattle_Y_C02021;Parent=Cattle_Y_T01535;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_7;gene_id=Cattle_Y_G00830;transcript_id=Cattle_Y_T01535;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48180680	48181095	.	-	2	ID=Cattle_Y_C02022;Parent=Cattle_Y_T01535;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_7;gene_id=Cattle_Y_G00830;transcript_id=Cattle_Y_T01535;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48181192	48181315	.	-	0	ID=Cattle_Y_C02023;Parent=Cattle_Y_T01535;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_7;gene_id=Cattle_Y_G00830;transcript_id=Cattle_Y_T01535;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48186609	48188855	.	-	.	ID=Cattle_Y_G00831;Dbxref=GeneID:132344602;Name=LOC132344602;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344602;gene_biotype=protein_coding;gene_id=Cattle_Y_G00831;source_id=gene-LOC132344602
haplotype2-0000357	CAT	mRNA	48186609	48188855	.	-	.	ID=Cattle_Y_T01536;Parent=Cattle_Y_G00831;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;Name=XM_059884268.1;gbkey=mRNA;gene=LOC132344602;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01536;gene_id=Cattle_Y_G00831;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884268.1
haplotype2-0000357	CAT	exon	48186609	48186686	.	-	.	ID=Cattle_Y_E02414;Parent=Cattle_Y_T01536;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01536;gene_id=Cattle_Y_G00831;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	48186803	48186948	.	-	.	ID=Cattle_Y_E02415;Parent=Cattle_Y_T01536;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01536;gene_id=Cattle_Y_G00831;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	48187044	48187155	.	-	.	ID=Cattle_Y_E02416;Parent=Cattle_Y_T01536;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01536;gene_id=Cattle_Y_G00831;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	48187339	48187416	.	-	.	ID=Cattle_Y_E02417;Parent=Cattle_Y_T01536;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01536;gene_id=Cattle_Y_G00831;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	48188220	48188635	.	-	.	ID=Cattle_Y_E02418;Parent=Cattle_Y_T01536;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01536;gene_id=Cattle_Y_G00831;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	48188732	48188855	.	-	.	ID=Cattle_Y_E02419;Parent=Cattle_Y_T01536;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01536;gene_id=Cattle_Y_G00831;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-1
haplotype2-0000357	CAT	CDS	48186609	48186686	.	-	0	ID=Cattle_Y_C02024;Parent=Cattle_Y_T01536;gene_id=Cattle_Y_G00831;transcript_id=Cattle_Y_T01536;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48186803	48186948	.	-	2	ID=Cattle_Y_C02025;Parent=Cattle_Y_T01536;gene_id=Cattle_Y_G00831;transcript_id=Cattle_Y_T01536;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48187044	48187155	.	-	0	ID=Cattle_Y_C02026;Parent=Cattle_Y_T01536;gene_id=Cattle_Y_G00831;transcript_id=Cattle_Y_T01536;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48187339	48187416	.	-	0	ID=Cattle_Y_C02027;Parent=Cattle_Y_T01536;gene_id=Cattle_Y_G00831;transcript_id=Cattle_Y_T01536;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48188220	48188635	.	-	2	ID=Cattle_Y_C02028;Parent=Cattle_Y_T01536;gene_id=Cattle_Y_G00831;transcript_id=Cattle_Y_T01536;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48188732	48188855	.	-	0	ID=Cattle_Y_C02029;Parent=Cattle_Y_T01536;gene_id=Cattle_Y_G00831;transcript_id=Cattle_Y_T01536;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48194148	48196394	.	-	.	ID=Cattle_Y_G00832;Dbxref=GeneID:132344602;Name=LOC132344602;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344602;gene_biotype=protein_coding;gene_id=Cattle_Y_G00832;source_id=gene-LOC132344602
haplotype2-0000357	CAT	mRNA	48194148	48196394	.	-	.	ID=Cattle_Y_T01537;Parent=Cattle_Y_G00832;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;Name=XM_059884268.1;gbkey=mRNA;gene=LOC132344602;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01537;gene_id=Cattle_Y_G00832;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884268.1
haplotype2-0000357	CAT	exon	48194148	48194225	.	-	.	ID=Cattle_Y_E02420;Parent=Cattle_Y_T01537;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01537;gene_id=Cattle_Y_G00832;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	48194342	48194487	.	-	.	ID=Cattle_Y_E02421;Parent=Cattle_Y_T01537;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01537;gene_id=Cattle_Y_G00832;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-5
haplotype2-0000357	CAT	exon	48194583	48194694	.	-	.	ID=Cattle_Y_E02422;Parent=Cattle_Y_T01537;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01537;gene_id=Cattle_Y_G00832;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-4
haplotype2-0000357	CAT	exon	48194878	48194955	.	-	.	ID=Cattle_Y_E02423;Parent=Cattle_Y_T01537;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01537;gene_id=Cattle_Y_G00832;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-3
haplotype2-0000357	CAT	exon	48195759	48196174	.	-	.	ID=Cattle_Y_E02424;Parent=Cattle_Y_T01537;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01537;gene_id=Cattle_Y_G00832;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-2
haplotype2-0000357	CAT	exon	48196271	48196394	.	-	.	ID=Cattle_Y_E02425;Parent=Cattle_Y_T01537;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01537;gene_id=Cattle_Y_G00832;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-1
haplotype2-0000357	CAT	CDS	48194148	48194225	.	-	0	ID=Cattle_Y_C02030;Parent=Cattle_Y_T01537;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_5;gene_id=Cattle_Y_G00832;transcript_id=Cattle_Y_T01537;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48194342	48194487	.	-	2	ID=Cattle_Y_C02031;Parent=Cattle_Y_T01537;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_5;gene_id=Cattle_Y_G00832;transcript_id=Cattle_Y_T01537;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48194583	48194694	.	-	0	ID=Cattle_Y_C02032;Parent=Cattle_Y_T01537;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_5;gene_id=Cattle_Y_G00832;transcript_id=Cattle_Y_T01537;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48194878	48194955	.	-	0	ID=Cattle_Y_C02033;Parent=Cattle_Y_T01537;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_5;gene_id=Cattle_Y_G00832;transcript_id=Cattle_Y_T01537;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48195759	48196174	.	-	2	ID=Cattle_Y_C02034;Parent=Cattle_Y_T01537;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_5;gene_id=Cattle_Y_G00832;transcript_id=Cattle_Y_T01537;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48196271	48196394	.	-	0	ID=Cattle_Y_C02035;Parent=Cattle_Y_T01537;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_5;gene_id=Cattle_Y_G00832;transcript_id=Cattle_Y_T01537;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48201685	48203931	1641	-	.	ID=Cattle_Y_G00833;Dbxref=GeneID:132344586;Name=LOC132344586;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344586;gene_biotype=protein_coding;gene_id=Cattle_Y_G00833;source_id=gene-LOC132344586
haplotype2-0000357	CAT	mRNA	48201685	48203931	1641	-	.	ID=Cattle_Y_T01538;Parent=Cattle_Y_G00833;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;Name=XM_059884252.1;gbkey=mRNA;gene=LOC132344586;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01538;gene_id=Cattle_Y_G00833;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884252.1
haplotype2-0000357	CAT	exon	48201685	48201762	136	-	0	ID=Cattle_Y_E02426;Parent=Cattle_Y_T01538;gene_id=Cattle_Y_G00833;transcript_id=Cattle_Y_T01538;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48201879	48202024	263	-	2	ID=Cattle_Y_E02427;Parent=Cattle_Y_T01538;gene_id=Cattle_Y_G00833;transcript_id=Cattle_Y_T01538;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48202120	48202231	203	-	0	ID=Cattle_Y_E02428;Parent=Cattle_Y_T01538;gene_id=Cattle_Y_G00833;transcript_id=Cattle_Y_T01538;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48202415	48202492	133	-	0	ID=Cattle_Y_E02429;Parent=Cattle_Y_T01538;gene_id=Cattle_Y_G00833;transcript_id=Cattle_Y_T01538;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48203296	48203711	688	-	2	ID=Cattle_Y_E02430;Parent=Cattle_Y_T01538;gene_id=Cattle_Y_G00833;transcript_id=Cattle_Y_T01538;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48203808	48203931	218	-	0	ID=Cattle_Y_E02431;Parent=Cattle_Y_T01538;gene_id=Cattle_Y_G00833;transcript_id=Cattle_Y_T01538;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48201685	48201762	136	-	0	ID=Cattle_Y_C02036;Parent=Cattle_Y_T01538;gene_id=Cattle_Y_G00833;transcript_id=Cattle_Y_T01538;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48201879	48202024	263	-	2	ID=Cattle_Y_C02037;Parent=Cattle_Y_T01538;gene_id=Cattle_Y_G00833;transcript_id=Cattle_Y_T01538;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48202120	48202231	203	-	0	ID=Cattle_Y_C02038;Parent=Cattle_Y_T01538;gene_id=Cattle_Y_G00833;transcript_id=Cattle_Y_T01538;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48202415	48202492	133	-	0	ID=Cattle_Y_C02039;Parent=Cattle_Y_T01538;gene_id=Cattle_Y_G00833;transcript_id=Cattle_Y_T01538;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48203296	48203711	688	-	2	ID=Cattle_Y_C02040;Parent=Cattle_Y_T01538;gene_id=Cattle_Y_G00833;transcript_id=Cattle_Y_T01538;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48203808	48203931	218	-	0	ID=Cattle_Y_C02041;Parent=Cattle_Y_T01538;gene_id=Cattle_Y_G00833;transcript_id=Cattle_Y_T01538;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48216762	48219008	1641	-	.	ID=Cattle_Y_G00834;Dbxref=GeneID:132344586;Name=LOC132344586;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344586;gene_biotype=protein_coding;gene_id=Cattle_Y_G00834;source_id=gene-LOC132344586
haplotype2-0000357	CAT	mRNA	48216762	48219008	1641	-	.	ID=Cattle_Y_T01539;Parent=Cattle_Y_G00834;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;Name=XM_059884252.1;gbkey=mRNA;gene=LOC132344586;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01539;gene_id=Cattle_Y_G00834;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884252.1
haplotype2-0000357	CAT	exon	48216762	48216839	136	-	0	ID=Cattle_Y_E02432;Parent=Cattle_Y_T01539;gene_id=Cattle_Y_G00834;transcript_id=Cattle_Y_T01539;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48216956	48217101	263	-	2	ID=Cattle_Y_E02433;Parent=Cattle_Y_T01539;gene_id=Cattle_Y_G00834;transcript_id=Cattle_Y_T01539;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48217197	48217308	203	-	0	ID=Cattle_Y_E02434;Parent=Cattle_Y_T01539;gene_id=Cattle_Y_G00834;transcript_id=Cattle_Y_T01539;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48217492	48217569	133	-	0	ID=Cattle_Y_E02435;Parent=Cattle_Y_T01539;gene_id=Cattle_Y_G00834;transcript_id=Cattle_Y_T01539;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48218373	48218788	688	-	2	ID=Cattle_Y_E02436;Parent=Cattle_Y_T01539;gene_id=Cattle_Y_G00834;transcript_id=Cattle_Y_T01539;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48218885	48219008	218	-	0	ID=Cattle_Y_E02437;Parent=Cattle_Y_T01539;gene_id=Cattle_Y_G00834;transcript_id=Cattle_Y_T01539;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48216762	48216839	136	-	0	ID=Cattle_Y_C02042;Parent=Cattle_Y_T01539;gene_id=Cattle_Y_G00834;transcript_id=Cattle_Y_T01539;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48216956	48217101	263	-	2	ID=Cattle_Y_C02043;Parent=Cattle_Y_T01539;gene_id=Cattle_Y_G00834;transcript_id=Cattle_Y_T01539;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48217197	48217308	203	-	0	ID=Cattle_Y_C02044;Parent=Cattle_Y_T01539;gene_id=Cattle_Y_G00834;transcript_id=Cattle_Y_T01539;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48217492	48217569	133	-	0	ID=Cattle_Y_C02045;Parent=Cattle_Y_T01539;gene_id=Cattle_Y_G00834;transcript_id=Cattle_Y_T01539;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48218373	48218788	688	-	2	ID=Cattle_Y_C02046;Parent=Cattle_Y_T01539;gene_id=Cattle_Y_G00834;transcript_id=Cattle_Y_T01539;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48218885	48219008	218	-	0	ID=Cattle_Y_C02047;Parent=Cattle_Y_T01539;gene_id=Cattle_Y_G00834;transcript_id=Cattle_Y_T01539;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48224299	48226545	1641	-	.	ID=Cattle_Y_G00835;Dbxref=GeneID:132344586;Name=LOC132344586;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344586;gene_biotype=protein_coding;gene_id=Cattle_Y_G00835;source_id=gene-LOC132344586
haplotype2-0000357	CAT	mRNA	48224299	48226545	1641	-	.	ID=Cattle_Y_T01540;Parent=Cattle_Y_G00835;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;Name=XM_059884252.1;gbkey=mRNA;gene=LOC132344586;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01540;gene_id=Cattle_Y_G00835;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884252.1
haplotype2-0000357	CAT	exon	48224299	48224376	136	-	0	ID=Cattle_Y_E02438;Parent=Cattle_Y_T01540;gene_id=Cattle_Y_G00835;transcript_id=Cattle_Y_T01540;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48224493	48224638	263	-	2	ID=Cattle_Y_E02439;Parent=Cattle_Y_T01540;gene_id=Cattle_Y_G00835;transcript_id=Cattle_Y_T01540;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48224734	48224845	203	-	0	ID=Cattle_Y_E02440;Parent=Cattle_Y_T01540;gene_id=Cattle_Y_G00835;transcript_id=Cattle_Y_T01540;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48225029	48225106	133	-	0	ID=Cattle_Y_E02441;Parent=Cattle_Y_T01540;gene_id=Cattle_Y_G00835;transcript_id=Cattle_Y_T01540;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48225910	48226325	688	-	2	ID=Cattle_Y_E02442;Parent=Cattle_Y_T01540;gene_id=Cattle_Y_G00835;transcript_id=Cattle_Y_T01540;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48226422	48226545	218	-	0	ID=Cattle_Y_E02443;Parent=Cattle_Y_T01540;gene_id=Cattle_Y_G00835;transcript_id=Cattle_Y_T01540;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48224299	48224376	136	-	0	ID=Cattle_Y_C02048;Parent=Cattle_Y_T01540;gene_id=Cattle_Y_G00835;transcript_id=Cattle_Y_T01540;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48224493	48224638	263	-	2	ID=Cattle_Y_C02049;Parent=Cattle_Y_T01540;gene_id=Cattle_Y_G00835;transcript_id=Cattle_Y_T01540;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48224734	48224845	203	-	0	ID=Cattle_Y_C02050;Parent=Cattle_Y_T01540;gene_id=Cattle_Y_G00835;transcript_id=Cattle_Y_T01540;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48225029	48225106	133	-	0	ID=Cattle_Y_C02051;Parent=Cattle_Y_T01540;gene_id=Cattle_Y_G00835;transcript_id=Cattle_Y_T01540;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48225910	48226325	688	-	2	ID=Cattle_Y_C02052;Parent=Cattle_Y_T01540;gene_id=Cattle_Y_G00835;transcript_id=Cattle_Y_T01540;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48226422	48226545	218	-	0	ID=Cattle_Y_C02053;Parent=Cattle_Y_T01540;gene_id=Cattle_Y_G00835;transcript_id=Cattle_Y_T01540;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48231836	48234082	.	-	.	ID=Cattle_Y_G00836;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00836;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48231836	48234082	.	-	.	ID=Cattle_Y_T01541;Parent=Cattle_Y_G00836;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01541;gene_id=Cattle_Y_G00836;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48231836	48231913	.	-	.	ID=Cattle_Y_E02444;Parent=Cattle_Y_T01541;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01541;gene_id=Cattle_Y_G00836;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48232030	48232175	.	-	.	ID=Cattle_Y_E02445;Parent=Cattle_Y_T01541;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01541;gene_id=Cattle_Y_G00836;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48232271	48232382	.	-	.	ID=Cattle_Y_E02446;Parent=Cattle_Y_T01541;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01541;gene_id=Cattle_Y_G00836;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48232566	48232643	.	-	.	ID=Cattle_Y_E02447;Parent=Cattle_Y_T01541;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01541;gene_id=Cattle_Y_G00836;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48233447	48233862	.	-	.	ID=Cattle_Y_E02448;Parent=Cattle_Y_T01541;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01541;gene_id=Cattle_Y_G00836;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48233959	48234082	.	-	.	ID=Cattle_Y_E02449;Parent=Cattle_Y_T01541;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01541;gene_id=Cattle_Y_G00836;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48231836	48231913	.	-	0	ID=Cattle_Y_C02054;Parent=Cattle_Y_T01541;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_18;gene_id=Cattle_Y_G00836;transcript_id=Cattle_Y_T01541;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48232030	48232175	.	-	2	ID=Cattle_Y_C02055;Parent=Cattle_Y_T01541;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_18;gene_id=Cattle_Y_G00836;transcript_id=Cattle_Y_T01541;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48232271	48232382	.	-	0	ID=Cattle_Y_C02056;Parent=Cattle_Y_T01541;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_18;gene_id=Cattle_Y_G00836;transcript_id=Cattle_Y_T01541;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48232566	48232643	.	-	0	ID=Cattle_Y_C02057;Parent=Cattle_Y_T01541;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_18;gene_id=Cattle_Y_G00836;transcript_id=Cattle_Y_T01541;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48233447	48233862	.	-	2	ID=Cattle_Y_C02058;Parent=Cattle_Y_T01541;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_18;gene_id=Cattle_Y_G00836;transcript_id=Cattle_Y_T01541;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48233959	48234082	.	-	0	ID=Cattle_Y_C02059;Parent=Cattle_Y_T01541;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_18;gene_id=Cattle_Y_G00836;transcript_id=Cattle_Y_T01541;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48239376	48241622	.	-	.	ID=Cattle_Y_G00837;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00837;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48239376	48241622	.	-	.	ID=Cattle_Y_T01542;Parent=Cattle_Y_G00837;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01542;gene_id=Cattle_Y_G00837;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48239376	48239453	.	-	.	ID=Cattle_Y_E02450;Parent=Cattle_Y_T01542;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01542;gene_id=Cattle_Y_G00837;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48239570	48239715	.	-	.	ID=Cattle_Y_E02451;Parent=Cattle_Y_T01542;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01542;gene_id=Cattle_Y_G00837;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48239811	48239922	.	-	.	ID=Cattle_Y_E02452;Parent=Cattle_Y_T01542;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01542;gene_id=Cattle_Y_G00837;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48240106	48240183	.	-	.	ID=Cattle_Y_E02453;Parent=Cattle_Y_T01542;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01542;gene_id=Cattle_Y_G00837;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48240987	48241402	.	-	.	ID=Cattle_Y_E02454;Parent=Cattle_Y_T01542;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01542;gene_id=Cattle_Y_G00837;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48241499	48241622	.	-	.	ID=Cattle_Y_E02455;Parent=Cattle_Y_T01542;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01542;gene_id=Cattle_Y_G00837;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48239376	48239453	.	-	0	ID=Cattle_Y_C02060;Parent=Cattle_Y_T01542;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_20;gene_id=Cattle_Y_G00837;transcript_id=Cattle_Y_T01542;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48239570	48239715	.	-	2	ID=Cattle_Y_C02061;Parent=Cattle_Y_T01542;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_20;gene_id=Cattle_Y_G00837;transcript_id=Cattle_Y_T01542;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48239811	48239922	.	-	0	ID=Cattle_Y_C02062;Parent=Cattle_Y_T01542;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_20;gene_id=Cattle_Y_G00837;transcript_id=Cattle_Y_T01542;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48240106	48240183	.	-	0	ID=Cattle_Y_C02063;Parent=Cattle_Y_T01542;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_20;gene_id=Cattle_Y_G00837;transcript_id=Cattle_Y_T01542;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48240987	48241402	.	-	2	ID=Cattle_Y_C02064;Parent=Cattle_Y_T01542;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_20;gene_id=Cattle_Y_G00837;transcript_id=Cattle_Y_T01542;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48241499	48241622	.	-	0	ID=Cattle_Y_C02065;Parent=Cattle_Y_T01542;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_20;gene_id=Cattle_Y_G00837;transcript_id=Cattle_Y_T01542;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48246913	48249153	.	-	.	ID=Cattle_Y_G00838;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00838;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48246913	48249153	.	-	.	ID=Cattle_Y_T01543;Parent=Cattle_Y_G00838;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01543;gene_id=Cattle_Y_G00838;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48246913	48246990	.	-	.	ID=Cattle_Y_E02456;Parent=Cattle_Y_T01543;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01543;gene_id=Cattle_Y_G00838;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48247107	48247252	.	-	.	ID=Cattle_Y_E02457;Parent=Cattle_Y_T01543;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01543;gene_id=Cattle_Y_G00838;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48247348	48247459	.	-	.	ID=Cattle_Y_E02458;Parent=Cattle_Y_T01543;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01543;gene_id=Cattle_Y_G00838;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48247643	48247720	.	-	.	ID=Cattle_Y_E02459;Parent=Cattle_Y_T01543;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01543;gene_id=Cattle_Y_G00838;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48248518	48248933	.	-	.	ID=Cattle_Y_E02460;Parent=Cattle_Y_T01543;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01543;gene_id=Cattle_Y_G00838;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48249030	48249153	.	-	.	ID=Cattle_Y_E02461;Parent=Cattle_Y_T01543;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01543;gene_id=Cattle_Y_G00838;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48246913	48246990	.	-	0	ID=Cattle_Y_C02066;Parent=Cattle_Y_T01543;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_12;gene_id=Cattle_Y_G00838;transcript_id=Cattle_Y_T01543;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48247107	48247252	.	-	2	ID=Cattle_Y_C02067;Parent=Cattle_Y_T01543;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_12;gene_id=Cattle_Y_G00838;transcript_id=Cattle_Y_T01543;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48247348	48247459	.	-	0	ID=Cattle_Y_C02068;Parent=Cattle_Y_T01543;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_12;gene_id=Cattle_Y_G00838;transcript_id=Cattle_Y_T01543;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48247643	48247720	.	-	0	ID=Cattle_Y_C02069;Parent=Cattle_Y_T01543;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_12;gene_id=Cattle_Y_G00838;transcript_id=Cattle_Y_T01543;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48248518	48248933	.	-	2	ID=Cattle_Y_C02070;Parent=Cattle_Y_T01543;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_12;gene_id=Cattle_Y_G00838;transcript_id=Cattle_Y_T01543;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48249030	48249153	.	-	0	ID=Cattle_Y_C02071;Parent=Cattle_Y_T01543;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_12;gene_id=Cattle_Y_G00838;transcript_id=Cattle_Y_T01543;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48254446	48256686	.	-	.	ID=Cattle_Y_G00839;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00839;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48254446	48256686	.	-	.	ID=Cattle_Y_T01544;Parent=Cattle_Y_G00839;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01544;gene_id=Cattle_Y_G00839;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48254446	48254523	.	-	.	ID=Cattle_Y_E02462;Parent=Cattle_Y_T01544;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01544;gene_id=Cattle_Y_G00839;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48254640	48254785	.	-	.	ID=Cattle_Y_E02463;Parent=Cattle_Y_T01544;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01544;gene_id=Cattle_Y_G00839;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48254881	48254992	.	-	.	ID=Cattle_Y_E02464;Parent=Cattle_Y_T01544;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01544;gene_id=Cattle_Y_G00839;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48255176	48255253	.	-	.	ID=Cattle_Y_E02465;Parent=Cattle_Y_T01544;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01544;gene_id=Cattle_Y_G00839;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48256051	48256466	.	-	.	ID=Cattle_Y_E02466;Parent=Cattle_Y_T01544;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01544;gene_id=Cattle_Y_G00839;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48256563	48256686	.	-	.	ID=Cattle_Y_E02467;Parent=Cattle_Y_T01544;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01544;gene_id=Cattle_Y_G00839;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48254446	48254523	.	-	0	ID=Cattle_Y_C02072;Parent=Cattle_Y_T01544;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_14;gene_id=Cattle_Y_G00839;transcript_id=Cattle_Y_T01544;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48254640	48254785	.	-	2	ID=Cattle_Y_C02073;Parent=Cattle_Y_T01544;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_14;gene_id=Cattle_Y_G00839;transcript_id=Cattle_Y_T01544;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48254881	48254992	.	-	0	ID=Cattle_Y_C02074;Parent=Cattle_Y_T01544;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_14;gene_id=Cattle_Y_G00839;transcript_id=Cattle_Y_T01544;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48255176	48255253	.	-	0	ID=Cattle_Y_C02075;Parent=Cattle_Y_T01544;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_14;gene_id=Cattle_Y_G00839;transcript_id=Cattle_Y_T01544;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48256051	48256466	.	-	2	ID=Cattle_Y_C02076;Parent=Cattle_Y_T01544;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_14;gene_id=Cattle_Y_G00839;transcript_id=Cattle_Y_T01544;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48256563	48256686	.	-	0	ID=Cattle_Y_C02077;Parent=Cattle_Y_T01544;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_14;gene_id=Cattle_Y_G00839;transcript_id=Cattle_Y_T01544;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48261977	48264222	.	-	.	ID=Cattle_Y_G00840;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00840;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48261977	48264222	.	-	.	ID=Cattle_Y_T01545;Parent=Cattle_Y_G00840;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01545;gene_id=Cattle_Y_G00840;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48261977	48262054	.	-	.	ID=Cattle_Y_E02468;Parent=Cattle_Y_T01545;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01545;gene_id=Cattle_Y_G00840;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48262171	48262316	.	-	.	ID=Cattle_Y_E02469;Parent=Cattle_Y_T01545;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01545;gene_id=Cattle_Y_G00840;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48262412	48262523	.	-	.	ID=Cattle_Y_E02470;Parent=Cattle_Y_T01545;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01545;gene_id=Cattle_Y_G00840;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48262707	48262784	.	-	.	ID=Cattle_Y_E02471;Parent=Cattle_Y_T01545;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01545;gene_id=Cattle_Y_G00840;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48263588	48264003	.	-	.	ID=Cattle_Y_E02472;Parent=Cattle_Y_T01545;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01545;gene_id=Cattle_Y_G00840;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48264099	48264222	.	-	.	ID=Cattle_Y_E02473;Parent=Cattle_Y_T01545;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01545;gene_id=Cattle_Y_G00840;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48261977	48262054	.	-	0	ID=Cattle_Y_C02078;Parent=Cattle_Y_T01545;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_15;gene_id=Cattle_Y_G00840;transcript_id=Cattle_Y_T01545;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48262171	48262316	.	-	2	ID=Cattle_Y_C02079;Parent=Cattle_Y_T01545;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_15;gene_id=Cattle_Y_G00840;transcript_id=Cattle_Y_T01545;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48262412	48262523	.	-	0	ID=Cattle_Y_C02080;Parent=Cattle_Y_T01545;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_15;gene_id=Cattle_Y_G00840;transcript_id=Cattle_Y_T01545;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48262707	48262784	.	-	0	ID=Cattle_Y_C02081;Parent=Cattle_Y_T01545;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_15;gene_id=Cattle_Y_G00840;transcript_id=Cattle_Y_T01545;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48263588	48264003	.	-	2	ID=Cattle_Y_C02082;Parent=Cattle_Y_T01545;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_15;gene_id=Cattle_Y_G00840;transcript_id=Cattle_Y_T01545;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48264099	48264222	.	-	0	ID=Cattle_Y_C02083;Parent=Cattle_Y_T01545;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_15;gene_id=Cattle_Y_G00840;transcript_id=Cattle_Y_T01545;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48269512	48271758	.	-	.	ID=Cattle_Y_G00841;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00841;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48269512	48271758	.	-	.	ID=Cattle_Y_T01546;Parent=Cattle_Y_G00841;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01546;gene_id=Cattle_Y_G00841;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48269512	48269589	.	-	.	ID=Cattle_Y_E02474;Parent=Cattle_Y_T01546;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01546;gene_id=Cattle_Y_G00841;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48269706	48269851	.	-	.	ID=Cattle_Y_E02475;Parent=Cattle_Y_T01546;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01546;gene_id=Cattle_Y_G00841;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48269947	48270058	.	-	.	ID=Cattle_Y_E02476;Parent=Cattle_Y_T01546;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01546;gene_id=Cattle_Y_G00841;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48270242	48270319	.	-	.	ID=Cattle_Y_E02477;Parent=Cattle_Y_T01546;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01546;gene_id=Cattle_Y_G00841;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48271123	48271538	.	-	.	ID=Cattle_Y_E02478;Parent=Cattle_Y_T01546;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01546;gene_id=Cattle_Y_G00841;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48271635	48271758	.	-	.	ID=Cattle_Y_E02479;Parent=Cattle_Y_T01546;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01546;gene_id=Cattle_Y_G00841;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48269512	48269589	.	-	0	ID=Cattle_Y_C02084;Parent=Cattle_Y_T01546;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_36;gene_id=Cattle_Y_G00841;transcript_id=Cattle_Y_T01546;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48269706	48269851	.	-	2	ID=Cattle_Y_C02085;Parent=Cattle_Y_T01546;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_36;gene_id=Cattle_Y_G00841;transcript_id=Cattle_Y_T01546;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48269947	48270058	.	-	0	ID=Cattle_Y_C02086;Parent=Cattle_Y_T01546;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_36;gene_id=Cattle_Y_G00841;transcript_id=Cattle_Y_T01546;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48270242	48270319	.	-	0	ID=Cattle_Y_C02087;Parent=Cattle_Y_T01546;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_36;gene_id=Cattle_Y_G00841;transcript_id=Cattle_Y_T01546;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48271123	48271538	.	-	2	ID=Cattle_Y_C02088;Parent=Cattle_Y_T01546;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_36;gene_id=Cattle_Y_G00841;transcript_id=Cattle_Y_T01546;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48271635	48271758	.	-	0	ID=Cattle_Y_C02089;Parent=Cattle_Y_T01546;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_36;gene_id=Cattle_Y_G00841;transcript_id=Cattle_Y_T01546;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48277054	48279300	.	-	.	ID=Cattle_Y_G00842;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00842;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48277054	48279300	.	-	.	ID=Cattle_Y_T01547;Parent=Cattle_Y_G00842;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01547;gene_id=Cattle_Y_G00842;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48277054	48277131	.	-	.	ID=Cattle_Y_E02480;Parent=Cattle_Y_T01547;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01547;gene_id=Cattle_Y_G00842;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48277248	48277393	.	-	.	ID=Cattle_Y_E02481;Parent=Cattle_Y_T01547;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01547;gene_id=Cattle_Y_G00842;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48277489	48277600	.	-	.	ID=Cattle_Y_E02482;Parent=Cattle_Y_T01547;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01547;gene_id=Cattle_Y_G00842;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48277784	48277861	.	-	.	ID=Cattle_Y_E02483;Parent=Cattle_Y_T01547;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01547;gene_id=Cattle_Y_G00842;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48278665	48279080	.	-	.	ID=Cattle_Y_E02484;Parent=Cattle_Y_T01547;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01547;gene_id=Cattle_Y_G00842;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48279177	48279300	.	-	.	ID=Cattle_Y_E02485;Parent=Cattle_Y_T01547;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01547;gene_id=Cattle_Y_G00842;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48277054	48277131	.	-	0	ID=Cattle_Y_C02090;Parent=Cattle_Y_T01547;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_6;gene_id=Cattle_Y_G00842;transcript_id=Cattle_Y_T01547;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48277248	48277393	.	-	2	ID=Cattle_Y_C02091;Parent=Cattle_Y_T01547;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_6;gene_id=Cattle_Y_G00842;transcript_id=Cattle_Y_T01547;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48277489	48277600	.	-	0	ID=Cattle_Y_C02092;Parent=Cattle_Y_T01547;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_6;gene_id=Cattle_Y_G00842;transcript_id=Cattle_Y_T01547;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48277784	48277861	.	-	0	ID=Cattle_Y_C02093;Parent=Cattle_Y_T01547;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_6;gene_id=Cattle_Y_G00842;transcript_id=Cattle_Y_T01547;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48278665	48279080	.	-	2	ID=Cattle_Y_C02094;Parent=Cattle_Y_T01547;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_6;gene_id=Cattle_Y_G00842;transcript_id=Cattle_Y_T01547;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48279177	48279300	.	-	0	ID=Cattle_Y_C02095;Parent=Cattle_Y_T01547;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_6;gene_id=Cattle_Y_G00842;transcript_id=Cattle_Y_T01547;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48284591	48286837	.	-	.	ID=Cattle_Y_G00843;Dbxref=GeneID:132344602;Name=LOC132344602;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344602;gene_biotype=protein_coding;gene_id=Cattle_Y_G00843;source_id=gene-LOC132344602
haplotype2-0000357	CAT	mRNA	48284591	48286837	.	-	.	ID=Cattle_Y_T01548;Parent=Cattle_Y_G00843;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;Name=XM_059884268.1;gbkey=mRNA;gene=LOC132344602;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01548;gene_id=Cattle_Y_G00843;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884268.1
haplotype2-0000357	CAT	exon	48284591	48284668	.	-	.	ID=Cattle_Y_E02486;Parent=Cattle_Y_T01548;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01548;gene_id=Cattle_Y_G00843;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	48284785	48284930	.	-	.	ID=Cattle_Y_E02487;Parent=Cattle_Y_T01548;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01548;gene_id=Cattle_Y_G00843;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-5
haplotype2-0000357	CAT	exon	48285026	48285137	.	-	.	ID=Cattle_Y_E02488;Parent=Cattle_Y_T01548;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01548;gene_id=Cattle_Y_G00843;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-4
haplotype2-0000357	CAT	exon	48285321	48285398	.	-	.	ID=Cattle_Y_E02489;Parent=Cattle_Y_T01548;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01548;gene_id=Cattle_Y_G00843;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-3
haplotype2-0000357	CAT	exon	48286202	48286617	.	-	.	ID=Cattle_Y_E02490;Parent=Cattle_Y_T01548;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01548;gene_id=Cattle_Y_G00843;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-2
haplotype2-0000357	CAT	exon	48286714	48286837	.	-	.	ID=Cattle_Y_E02491;Parent=Cattle_Y_T01548;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01548;gene_id=Cattle_Y_G00843;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-1
haplotype2-0000357	CAT	CDS	48284591	48284668	.	-	0	ID=Cattle_Y_C02096;Parent=Cattle_Y_T01548;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_4;gene_id=Cattle_Y_G00843;transcript_id=Cattle_Y_T01548;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48284785	48284930	.	-	2	ID=Cattle_Y_C02097;Parent=Cattle_Y_T01548;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_4;gene_id=Cattle_Y_G00843;transcript_id=Cattle_Y_T01548;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48285026	48285137	.	-	0	ID=Cattle_Y_C02098;Parent=Cattle_Y_T01548;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_4;gene_id=Cattle_Y_G00843;transcript_id=Cattle_Y_T01548;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48285321	48285398	.	-	0	ID=Cattle_Y_C02099;Parent=Cattle_Y_T01548;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_4;gene_id=Cattle_Y_G00843;transcript_id=Cattle_Y_T01548;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48286202	48286617	.	-	2	ID=Cattle_Y_C02100;Parent=Cattle_Y_T01548;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_4;gene_id=Cattle_Y_G00843;transcript_id=Cattle_Y_T01548;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48286714	48286837	.	-	0	ID=Cattle_Y_C02101;Parent=Cattle_Y_T01548;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_4;gene_id=Cattle_Y_G00843;transcript_id=Cattle_Y_T01548;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48292132	48294378	.	-	.	ID=Cattle_Y_G00844;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00844;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48292132	48294378	.	-	.	ID=Cattle_Y_T01549;Parent=Cattle_Y_G00844;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01549;gene_id=Cattle_Y_G00844;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48292132	48292209	.	-	.	ID=Cattle_Y_E02492;Parent=Cattle_Y_T01549;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01549;gene_id=Cattle_Y_G00844;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48292326	48292471	.	-	.	ID=Cattle_Y_E02493;Parent=Cattle_Y_T01549;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01549;gene_id=Cattle_Y_G00844;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48292567	48292678	.	-	.	ID=Cattle_Y_E02494;Parent=Cattle_Y_T01549;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01549;gene_id=Cattle_Y_G00844;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48292862	48292939	.	-	.	ID=Cattle_Y_E02495;Parent=Cattle_Y_T01549;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01549;gene_id=Cattle_Y_G00844;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48293743	48294158	.	-	.	ID=Cattle_Y_E02496;Parent=Cattle_Y_T01549;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01549;gene_id=Cattle_Y_G00844;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48294255	48294378	.	-	.	ID=Cattle_Y_E02497;Parent=Cattle_Y_T01549;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01549;gene_id=Cattle_Y_G00844;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48292132	48292209	.	-	0	ID=Cattle_Y_C02102;Parent=Cattle_Y_T01549;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_29;gene_id=Cattle_Y_G00844;transcript_id=Cattle_Y_T01549;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48292326	48292471	.	-	2	ID=Cattle_Y_C02103;Parent=Cattle_Y_T01549;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_29;gene_id=Cattle_Y_G00844;transcript_id=Cattle_Y_T01549;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48292567	48292678	.	-	0	ID=Cattle_Y_C02104;Parent=Cattle_Y_T01549;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_29;gene_id=Cattle_Y_G00844;transcript_id=Cattle_Y_T01549;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48292862	48292939	.	-	0	ID=Cattle_Y_C02105;Parent=Cattle_Y_T01549;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_29;gene_id=Cattle_Y_G00844;transcript_id=Cattle_Y_T01549;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48293743	48294158	.	-	2	ID=Cattle_Y_C02106;Parent=Cattle_Y_T01549;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_29;gene_id=Cattle_Y_G00844;transcript_id=Cattle_Y_T01549;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48294255	48294378	.	-	0	ID=Cattle_Y_C02107;Parent=Cattle_Y_T01549;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_29;gene_id=Cattle_Y_G00844;transcript_id=Cattle_Y_T01549;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48299668	48301914	.	-	.	ID=Cattle_Y_G00845;Dbxref=GeneID:132344602;Name=LOC132344602;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344602;gene_biotype=protein_coding;gene_id=Cattle_Y_G00845;source_id=gene-LOC132344602
haplotype2-0000357	CAT	mRNA	48299668	48301914	.	-	.	ID=Cattle_Y_T01550;Parent=Cattle_Y_G00845;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;Name=XM_059884268.1;gbkey=mRNA;gene=LOC132344602;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01550;gene_id=Cattle_Y_G00845;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884268.1
haplotype2-0000357	CAT	exon	48299668	48299745	.	-	.	ID=Cattle_Y_E02498;Parent=Cattle_Y_T01550;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01550;gene_id=Cattle_Y_G00845;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	48299862	48300007	.	-	.	ID=Cattle_Y_E02499;Parent=Cattle_Y_T01550;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01550;gene_id=Cattle_Y_G00845;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-5
haplotype2-0000357	CAT	exon	48300103	48300214	.	-	.	ID=Cattle_Y_E02500;Parent=Cattle_Y_T01550;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01550;gene_id=Cattle_Y_G00845;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-4
haplotype2-0000357	CAT	exon	48300398	48300475	.	-	.	ID=Cattle_Y_E02501;Parent=Cattle_Y_T01550;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01550;gene_id=Cattle_Y_G00845;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-3
haplotype2-0000357	CAT	exon	48301279	48301694	.	-	.	ID=Cattle_Y_E02502;Parent=Cattle_Y_T01550;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01550;gene_id=Cattle_Y_G00845;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-2
haplotype2-0000357	CAT	exon	48301791	48301914	.	-	.	ID=Cattle_Y_E02503;Parent=Cattle_Y_T01550;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01550;gene_id=Cattle_Y_G00845;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-1
haplotype2-0000357	CAT	CDS	48299668	48299745	.	-	0	ID=Cattle_Y_C02108;Parent=Cattle_Y_T01550;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_8;gene_id=Cattle_Y_G00845;transcript_id=Cattle_Y_T01550;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48299862	48300007	.	-	2	ID=Cattle_Y_C02109;Parent=Cattle_Y_T01550;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_8;gene_id=Cattle_Y_G00845;transcript_id=Cattle_Y_T01550;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48300103	48300214	.	-	0	ID=Cattle_Y_C02110;Parent=Cattle_Y_T01550;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_8;gene_id=Cattle_Y_G00845;transcript_id=Cattle_Y_T01550;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48300398	48300475	.	-	0	ID=Cattle_Y_C02111;Parent=Cattle_Y_T01550;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_8;gene_id=Cattle_Y_G00845;transcript_id=Cattle_Y_T01550;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48301279	48301694	.	-	2	ID=Cattle_Y_C02112;Parent=Cattle_Y_T01550;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_8;gene_id=Cattle_Y_G00845;transcript_id=Cattle_Y_T01550;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48301791	48301914	.	-	0	ID=Cattle_Y_C02113;Parent=Cattle_Y_T01550;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_8;gene_id=Cattle_Y_G00845;transcript_id=Cattle_Y_T01550;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48307204	48309450	.	-	.	ID=Cattle_Y_G00846;Dbxref=GeneID:132344602;Name=LOC132344602;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344602;gene_biotype=protein_coding;gene_id=Cattle_Y_G00846;source_id=gene-LOC132344602
haplotype2-0000357	CAT	mRNA	48307204	48309450	.	-	.	ID=Cattle_Y_T01551;Parent=Cattle_Y_G00846;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;Name=XM_059884268.1;gbkey=mRNA;gene=LOC132344602;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01551;gene_id=Cattle_Y_G00846;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884268.1
haplotype2-0000357	CAT	exon	48307204	48307281	.	-	.	ID=Cattle_Y_E02504;Parent=Cattle_Y_T01551;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01551;gene_id=Cattle_Y_G00846;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	48307398	48307543	.	-	.	ID=Cattle_Y_E02505;Parent=Cattle_Y_T01551;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01551;gene_id=Cattle_Y_G00846;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-5
haplotype2-0000357	CAT	exon	48307639	48307750	.	-	.	ID=Cattle_Y_E02506;Parent=Cattle_Y_T01551;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01551;gene_id=Cattle_Y_G00846;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-4
haplotype2-0000357	CAT	exon	48307934	48308011	.	-	.	ID=Cattle_Y_E02507;Parent=Cattle_Y_T01551;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01551;gene_id=Cattle_Y_G00846;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-3
haplotype2-0000357	CAT	exon	48308815	48309230	.	-	.	ID=Cattle_Y_E02508;Parent=Cattle_Y_T01551;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01551;gene_id=Cattle_Y_G00846;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-2
haplotype2-0000357	CAT	exon	48309327	48309450	.	-	.	ID=Cattle_Y_E02509;Parent=Cattle_Y_T01551;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01551;gene_id=Cattle_Y_G00846;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-1
haplotype2-0000357	CAT	CDS	48307204	48307281	.	-	0	ID=Cattle_Y_C02114;Parent=Cattle_Y_T01551;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_12;gene_id=Cattle_Y_G00846;transcript_id=Cattle_Y_T01551;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48307398	48307543	.	-	2	ID=Cattle_Y_C02115;Parent=Cattle_Y_T01551;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_12;gene_id=Cattle_Y_G00846;transcript_id=Cattle_Y_T01551;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48307639	48307750	.	-	0	ID=Cattle_Y_C02116;Parent=Cattle_Y_T01551;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_12;gene_id=Cattle_Y_G00846;transcript_id=Cattle_Y_T01551;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48307934	48308011	.	-	0	ID=Cattle_Y_C02117;Parent=Cattle_Y_T01551;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_12;gene_id=Cattle_Y_G00846;transcript_id=Cattle_Y_T01551;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48308815	48309230	.	-	2	ID=Cattle_Y_C02118;Parent=Cattle_Y_T01551;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_12;gene_id=Cattle_Y_G00846;transcript_id=Cattle_Y_T01551;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48309327	48309450	.	-	0	ID=Cattle_Y_C02119;Parent=Cattle_Y_T01551;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_12;gene_id=Cattle_Y_G00846;transcript_id=Cattle_Y_T01551;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48314743	48316989	.	-	.	ID=Cattle_Y_G00847;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00847;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48314743	48316989	.	-	.	ID=Cattle_Y_T01552;Parent=Cattle_Y_G00847;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01552;gene_id=Cattle_Y_G00847;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48314743	48314820	.	-	.	ID=Cattle_Y_E02510;Parent=Cattle_Y_T01552;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01552;gene_id=Cattle_Y_G00847;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48314937	48315082	.	-	.	ID=Cattle_Y_E02511;Parent=Cattle_Y_T01552;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01552;gene_id=Cattle_Y_G00847;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48315178	48315289	.	-	.	ID=Cattle_Y_E02512;Parent=Cattle_Y_T01552;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01552;gene_id=Cattle_Y_G00847;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48315473	48315550	.	-	.	ID=Cattle_Y_E02513;Parent=Cattle_Y_T01552;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01552;gene_id=Cattle_Y_G00847;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48316354	48316769	.	-	.	ID=Cattle_Y_E02514;Parent=Cattle_Y_T01552;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01552;gene_id=Cattle_Y_G00847;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48316866	48316989	.	-	.	ID=Cattle_Y_E02515;Parent=Cattle_Y_T01552;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01552;gene_id=Cattle_Y_G00847;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48314743	48314820	.	-	0	ID=Cattle_Y_C02120;Parent=Cattle_Y_T01552;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_22;gene_id=Cattle_Y_G00847;transcript_id=Cattle_Y_T01552;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48314937	48315082	.	-	2	ID=Cattle_Y_C02121;Parent=Cattle_Y_T01552;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_22;gene_id=Cattle_Y_G00847;transcript_id=Cattle_Y_T01552;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48315178	48315289	.	-	0	ID=Cattle_Y_C02122;Parent=Cattle_Y_T01552;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_22;gene_id=Cattle_Y_G00847;transcript_id=Cattle_Y_T01552;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48315473	48315550	.	-	0	ID=Cattle_Y_C02123;Parent=Cattle_Y_T01552;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_22;gene_id=Cattle_Y_G00847;transcript_id=Cattle_Y_T01552;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48316354	48316769	.	-	2	ID=Cattle_Y_C02124;Parent=Cattle_Y_T01552;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_22;gene_id=Cattle_Y_G00847;transcript_id=Cattle_Y_T01552;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48316866	48316989	.	-	0	ID=Cattle_Y_C02125;Parent=Cattle_Y_T01552;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_22;gene_id=Cattle_Y_G00847;transcript_id=Cattle_Y_T01552;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48322280	48324526	.	-	.	ID=Cattle_Y_G00848;Dbxref=GeneID:132344602;Name=LOC132344602;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344602;gene_biotype=protein_coding;gene_id=Cattle_Y_G00848;source_id=gene-LOC132344602
haplotype2-0000357	CAT	mRNA	48322280	48324526	.	-	.	ID=Cattle_Y_T01553;Parent=Cattle_Y_G00848;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;Name=XM_059884268.1;gbkey=mRNA;gene=LOC132344602;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01553;gene_id=Cattle_Y_G00848;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884268.1
haplotype2-0000357	CAT	exon	48322280	48322357	.	-	.	ID=Cattle_Y_E02516;Parent=Cattle_Y_T01553;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01553;gene_id=Cattle_Y_G00848;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	48322474	48322619	.	-	.	ID=Cattle_Y_E02517;Parent=Cattle_Y_T01553;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01553;gene_id=Cattle_Y_G00848;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-5
haplotype2-0000357	CAT	exon	48322715	48322826	.	-	.	ID=Cattle_Y_E02518;Parent=Cattle_Y_T01553;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01553;gene_id=Cattle_Y_G00848;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-4
haplotype2-0000357	CAT	exon	48323010	48323087	.	-	.	ID=Cattle_Y_E02519;Parent=Cattle_Y_T01553;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01553;gene_id=Cattle_Y_G00848;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-3
haplotype2-0000357	CAT	exon	48323891	48324306	.	-	.	ID=Cattle_Y_E02520;Parent=Cattle_Y_T01553;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01553;gene_id=Cattle_Y_G00848;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-2
haplotype2-0000357	CAT	exon	48324403	48324526	.	-	.	ID=Cattle_Y_E02521;Parent=Cattle_Y_T01553;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01553;gene_id=Cattle_Y_G00848;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-1
haplotype2-0000357	CAT	CDS	48322280	48322357	.	-	0	ID=Cattle_Y_C02126;Parent=Cattle_Y_T01553;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_10;gene_id=Cattle_Y_G00848;transcript_id=Cattle_Y_T01553;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48322474	48322619	.	-	2	ID=Cattle_Y_C02127;Parent=Cattle_Y_T01553;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_10;gene_id=Cattle_Y_G00848;transcript_id=Cattle_Y_T01553;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48322715	48322826	.	-	0	ID=Cattle_Y_C02128;Parent=Cattle_Y_T01553;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_10;gene_id=Cattle_Y_G00848;transcript_id=Cattle_Y_T01553;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48323010	48323087	.	-	0	ID=Cattle_Y_C02129;Parent=Cattle_Y_T01553;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_10;gene_id=Cattle_Y_G00848;transcript_id=Cattle_Y_T01553;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48323891	48324306	.	-	2	ID=Cattle_Y_C02130;Parent=Cattle_Y_T01553;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_10;gene_id=Cattle_Y_G00848;transcript_id=Cattle_Y_T01553;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48324403	48324526	.	-	0	ID=Cattle_Y_C02131;Parent=Cattle_Y_T01553;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1_10;gene_id=Cattle_Y_G00848;transcript_id=Cattle_Y_T01553;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48344907	48347153	.	-	.	ID=Cattle_Y_G00849;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00849;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48344907	48347153	.	-	.	ID=Cattle_Y_T01554;Parent=Cattle_Y_G00849;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01554;gene_id=Cattle_Y_G00849;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48344907	48344984	.	-	.	ID=Cattle_Y_E02522;Parent=Cattle_Y_T01554;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01554;gene_id=Cattle_Y_G00849;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48345101	48345246	.	-	.	ID=Cattle_Y_E02523;Parent=Cattle_Y_T01554;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01554;gene_id=Cattle_Y_G00849;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48345342	48345453	.	-	.	ID=Cattle_Y_E02524;Parent=Cattle_Y_T01554;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01554;gene_id=Cattle_Y_G00849;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48345637	48345714	.	-	.	ID=Cattle_Y_E02525;Parent=Cattle_Y_T01554;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01554;gene_id=Cattle_Y_G00849;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48346518	48346933	.	-	.	ID=Cattle_Y_E02526;Parent=Cattle_Y_T01554;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01554;gene_id=Cattle_Y_G00849;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48347030	48347153	.	-	.	ID=Cattle_Y_E02527;Parent=Cattle_Y_T01554;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01554;gene_id=Cattle_Y_G00849;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48344907	48344984	.	-	0	ID=Cattle_Y_C02132;Parent=Cattle_Y_T01554;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_38;gene_id=Cattle_Y_G00849;transcript_id=Cattle_Y_T01554;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48345101	48345246	.	-	2	ID=Cattle_Y_C02133;Parent=Cattle_Y_T01554;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_38;gene_id=Cattle_Y_G00849;transcript_id=Cattle_Y_T01554;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48345342	48345453	.	-	0	ID=Cattle_Y_C02134;Parent=Cattle_Y_T01554;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_38;gene_id=Cattle_Y_G00849;transcript_id=Cattle_Y_T01554;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48345637	48345714	.	-	0	ID=Cattle_Y_C02135;Parent=Cattle_Y_T01554;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_38;gene_id=Cattle_Y_G00849;transcript_id=Cattle_Y_T01554;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48346518	48346933	.	-	2	ID=Cattle_Y_C02136;Parent=Cattle_Y_T01554;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_38;gene_id=Cattle_Y_G00849;transcript_id=Cattle_Y_T01554;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48347030	48347153	.	-	0	ID=Cattle_Y_C02137;Parent=Cattle_Y_T01554;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_38;gene_id=Cattle_Y_G00849;transcript_id=Cattle_Y_T01554;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48352445	48354691	.	-	.	ID=Cattle_Y_G00850;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00850;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48352445	48354691	.	-	.	ID=Cattle_Y_T01555;Parent=Cattle_Y_G00850;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01555;gene_id=Cattle_Y_G00850;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48352445	48352522	.	-	.	ID=Cattle_Y_E02528;Parent=Cattle_Y_T01555;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01555;gene_id=Cattle_Y_G00850;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48352639	48352784	.	-	.	ID=Cattle_Y_E02529;Parent=Cattle_Y_T01555;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01555;gene_id=Cattle_Y_G00850;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48352880	48352991	.	-	.	ID=Cattle_Y_E02530;Parent=Cattle_Y_T01555;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01555;gene_id=Cattle_Y_G00850;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48353175	48353252	.	-	.	ID=Cattle_Y_E02531;Parent=Cattle_Y_T01555;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01555;gene_id=Cattle_Y_G00850;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48354056	48354471	.	-	.	ID=Cattle_Y_E02532;Parent=Cattle_Y_T01555;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01555;gene_id=Cattle_Y_G00850;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48354568	48354691	.	-	.	ID=Cattle_Y_E02533;Parent=Cattle_Y_T01555;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01555;gene_id=Cattle_Y_G00850;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48352445	48352522	.	-	0	ID=Cattle_Y_C02138;Parent=Cattle_Y_T01555;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_37;gene_id=Cattle_Y_G00850;transcript_id=Cattle_Y_T01555;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48352639	48352784	.	-	2	ID=Cattle_Y_C02139;Parent=Cattle_Y_T01555;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_37;gene_id=Cattle_Y_G00850;transcript_id=Cattle_Y_T01555;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48352880	48352991	.	-	0	ID=Cattle_Y_C02140;Parent=Cattle_Y_T01555;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_37;gene_id=Cattle_Y_G00850;transcript_id=Cattle_Y_T01555;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48353175	48353252	.	-	0	ID=Cattle_Y_C02141;Parent=Cattle_Y_T01555;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_37;gene_id=Cattle_Y_G00850;transcript_id=Cattle_Y_T01555;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48354056	48354471	.	-	2	ID=Cattle_Y_C02142;Parent=Cattle_Y_T01555;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_37;gene_id=Cattle_Y_G00850;transcript_id=Cattle_Y_T01555;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48354568	48354691	.	-	0	ID=Cattle_Y_C02143;Parent=Cattle_Y_T01555;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_37;gene_id=Cattle_Y_G00850;transcript_id=Cattle_Y_T01555;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48359980	48362220	.	-	.	ID=Cattle_Y_G00851;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00851;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48359980	48362220	.	-	.	ID=Cattle_Y_T01556;Parent=Cattle_Y_G00851;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01556;gene_id=Cattle_Y_G00851;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48359980	48360057	.	-	.	ID=Cattle_Y_E02534;Parent=Cattle_Y_T01556;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01556;gene_id=Cattle_Y_G00851;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48360174	48360319	.	-	.	ID=Cattle_Y_E02535;Parent=Cattle_Y_T01556;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01556;gene_id=Cattle_Y_G00851;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48360415	48360526	.	-	.	ID=Cattle_Y_E02536;Parent=Cattle_Y_T01556;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01556;gene_id=Cattle_Y_G00851;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48360710	48360787	.	-	.	ID=Cattle_Y_E02537;Parent=Cattle_Y_T01556;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01556;gene_id=Cattle_Y_G00851;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48361585	48362000	.	-	.	ID=Cattle_Y_E02538;Parent=Cattle_Y_T01556;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01556;gene_id=Cattle_Y_G00851;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48362097	48362220	.	-	.	ID=Cattle_Y_E02539;Parent=Cattle_Y_T01556;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01556;gene_id=Cattle_Y_G00851;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48359980	48360057	.	-	0	ID=Cattle_Y_C02144;Parent=Cattle_Y_T01556;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_4;gene_id=Cattle_Y_G00851;transcript_id=Cattle_Y_T01556;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48360174	48360319	.	-	2	ID=Cattle_Y_C02145;Parent=Cattle_Y_T01556;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_4;gene_id=Cattle_Y_G00851;transcript_id=Cattle_Y_T01556;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48360415	48360526	.	-	0	ID=Cattle_Y_C02146;Parent=Cattle_Y_T01556;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_4;gene_id=Cattle_Y_G00851;transcript_id=Cattle_Y_T01556;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48360710	48360787	.	-	0	ID=Cattle_Y_C02147;Parent=Cattle_Y_T01556;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_4;gene_id=Cattle_Y_G00851;transcript_id=Cattle_Y_T01556;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48361585	48362000	.	-	2	ID=Cattle_Y_C02148;Parent=Cattle_Y_T01556;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_4;gene_id=Cattle_Y_G00851;transcript_id=Cattle_Y_T01556;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48362097	48362220	.	-	0	ID=Cattle_Y_C02149;Parent=Cattle_Y_T01556;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_4;gene_id=Cattle_Y_G00851;transcript_id=Cattle_Y_T01556;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48367512	48369752	.	-	.	ID=Cattle_Y_G00852;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00852;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48367512	48369752	.	-	.	ID=Cattle_Y_T01557;Parent=Cattle_Y_G00852;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01557;gene_id=Cattle_Y_G00852;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48367512	48367589	.	-	.	ID=Cattle_Y_E02540;Parent=Cattle_Y_T01557;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01557;gene_id=Cattle_Y_G00852;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48367706	48367851	.	-	.	ID=Cattle_Y_E02541;Parent=Cattle_Y_T01557;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01557;gene_id=Cattle_Y_G00852;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48367947	48368058	.	-	.	ID=Cattle_Y_E02542;Parent=Cattle_Y_T01557;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01557;gene_id=Cattle_Y_G00852;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48368242	48368319	.	-	.	ID=Cattle_Y_E02543;Parent=Cattle_Y_T01557;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01557;gene_id=Cattle_Y_G00852;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48369117	48369532	.	-	.	ID=Cattle_Y_E02544;Parent=Cattle_Y_T01557;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01557;gene_id=Cattle_Y_G00852;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48369629	48369752	.	-	.	ID=Cattle_Y_E02545;Parent=Cattle_Y_T01557;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01557;gene_id=Cattle_Y_G00852;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48367512	48367589	.	-	0	ID=Cattle_Y_C02150;Parent=Cattle_Y_T01557;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_3;gene_id=Cattle_Y_G00852;transcript_id=Cattle_Y_T01557;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48367706	48367851	.	-	2	ID=Cattle_Y_C02151;Parent=Cattle_Y_T01557;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_3;gene_id=Cattle_Y_G00852;transcript_id=Cattle_Y_T01557;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48367947	48368058	.	-	0	ID=Cattle_Y_C02152;Parent=Cattle_Y_T01557;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_3;gene_id=Cattle_Y_G00852;transcript_id=Cattle_Y_T01557;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48368242	48368319	.	-	0	ID=Cattle_Y_C02153;Parent=Cattle_Y_T01557;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_3;gene_id=Cattle_Y_G00852;transcript_id=Cattle_Y_T01557;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48369117	48369532	.	-	2	ID=Cattle_Y_C02154;Parent=Cattle_Y_T01557;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_3;gene_id=Cattle_Y_G00852;transcript_id=Cattle_Y_T01557;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48369629	48369752	.	-	0	ID=Cattle_Y_C02155;Parent=Cattle_Y_T01557;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_3;gene_id=Cattle_Y_G00852;transcript_id=Cattle_Y_T01557;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48375044	48377176	.	-	.	ID=Cattle_Y_G00853;Dbxref=GeneID:132344587;Name=LOC132344587;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344587;gene_biotype=protein_coding;partial=true;start_range=.,9435132;gene_id=Cattle_Y_G00853;source_id=gene-LOC132344587
haplotype2-0000357	CAT	mRNA	48375044	48377176	.	-	.	ID=Cattle_Y_T01558;Parent=Cattle_Y_G00853;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;Name=XM_059884253.1;gbkey=mRNA;gene=LOC132344587;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9435132;transcript_id=Cattle_Y_T01558;gene_id=Cattle_Y_G00853;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884253.1
haplotype2-0000357	CAT	exon	48375044	48375121	.	-	.	ID=Cattle_Y_E02546;Parent=Cattle_Y_T01558;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01558;gene_id=Cattle_Y_G00853;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-6
haplotype2-0000357	CAT	exon	48375238	48375383	.	-	.	ID=Cattle_Y_E02547;Parent=Cattle_Y_T01558;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01558;gene_id=Cattle_Y_G00853;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-5
haplotype2-0000357	CAT	exon	48375479	48375590	.	-	.	ID=Cattle_Y_E02548;Parent=Cattle_Y_T01558;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01558;gene_id=Cattle_Y_G00853;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-4
haplotype2-0000357	CAT	exon	48375774	48375851	.	-	.	ID=Cattle_Y_E02549;Parent=Cattle_Y_T01558;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01558;gene_id=Cattle_Y_G00853;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-3
haplotype2-0000357	CAT	exon	48376649	48377064	.	-	.	ID=Cattle_Y_E02550;Parent=Cattle_Y_T01558;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01558;gene_id=Cattle_Y_G00853;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-2
haplotype2-0000357	CAT	exon	48377161	48377176	.	-	.	ID=Cattle_Y_E02551;Parent=Cattle_Y_T01558;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9435132;transcript_id=Cattle_Y_T01558;gene_id=Cattle_Y_G00853;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-1
haplotype2-0000357	CAT	CDS	48375044	48375121	.	-	0	ID=Cattle_Y_C02156;Parent=Cattle_Y_T01558;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_1;gene_id=Cattle_Y_G00853;transcript_id=Cattle_Y_T01558;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48375238	48375383	.	-	2	ID=Cattle_Y_C02157;Parent=Cattle_Y_T01558;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_1;gene_id=Cattle_Y_G00853;transcript_id=Cattle_Y_T01558;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48375479	48375590	.	-	0	ID=Cattle_Y_C02158;Parent=Cattle_Y_T01558;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_1;gene_id=Cattle_Y_G00853;transcript_id=Cattle_Y_T01558;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48375774	48375851	.	-	0	ID=Cattle_Y_C02159;Parent=Cattle_Y_T01558;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_1;gene_id=Cattle_Y_G00853;transcript_id=Cattle_Y_T01558;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48376649	48377064	.	-	2	ID=Cattle_Y_C02160;Parent=Cattle_Y_T01558;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_1;gene_id=Cattle_Y_G00853;transcript_id=Cattle_Y_T01558;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48377161	48377176	.	-	0	ID=Cattle_Y_C02161;Parent=Cattle_Y_T01558;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1_1;start_range=.,9435132;gene_id=Cattle_Y_G00853;transcript_id=Cattle_Y_T01558;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48390117	48392363	.	-	.	ID=Cattle_Y_G00854;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00854;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48390117	48392363	.	-	.	ID=Cattle_Y_T01559;Parent=Cattle_Y_G00854;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01559;gene_id=Cattle_Y_G00854;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48390117	48390194	.	-	.	ID=Cattle_Y_E02552;Parent=Cattle_Y_T01559;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01559;gene_id=Cattle_Y_G00854;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48390311	48390456	.	-	.	ID=Cattle_Y_E02553;Parent=Cattle_Y_T01559;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01559;gene_id=Cattle_Y_G00854;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48390552	48390663	.	-	.	ID=Cattle_Y_E02554;Parent=Cattle_Y_T01559;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01559;gene_id=Cattle_Y_G00854;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48390847	48390924	.	-	.	ID=Cattle_Y_E02555;Parent=Cattle_Y_T01559;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01559;gene_id=Cattle_Y_G00854;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48391728	48392143	.	-	.	ID=Cattle_Y_E02556;Parent=Cattle_Y_T01559;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01559;gene_id=Cattle_Y_G00854;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48392240	48392363	.	-	.	ID=Cattle_Y_E02557;Parent=Cattle_Y_T01559;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01559;gene_id=Cattle_Y_G00854;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48390117	48390194	.	-	0	ID=Cattle_Y_C02162;Parent=Cattle_Y_T01559;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_9;gene_id=Cattle_Y_G00854;transcript_id=Cattle_Y_T01559;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48390311	48390456	.	-	2	ID=Cattle_Y_C02163;Parent=Cattle_Y_T01559;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_9;gene_id=Cattle_Y_G00854;transcript_id=Cattle_Y_T01559;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48390552	48390663	.	-	0	ID=Cattle_Y_C02164;Parent=Cattle_Y_T01559;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_9;gene_id=Cattle_Y_G00854;transcript_id=Cattle_Y_T01559;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48390847	48390924	.	-	0	ID=Cattle_Y_C02165;Parent=Cattle_Y_T01559;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_9;gene_id=Cattle_Y_G00854;transcript_id=Cattle_Y_T01559;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48391728	48392143	.	-	2	ID=Cattle_Y_C02166;Parent=Cattle_Y_T01559;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_9;gene_id=Cattle_Y_G00854;transcript_id=Cattle_Y_T01559;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48392240	48392363	.	-	0	ID=Cattle_Y_C02167;Parent=Cattle_Y_T01559;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_9;gene_id=Cattle_Y_G00854;transcript_id=Cattle_Y_T01559;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48397656	48399902	.	-	.	ID=Cattle_Y_G00855;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00855;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48397656	48399902	.	-	.	ID=Cattle_Y_T01560;Parent=Cattle_Y_G00855;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01560;gene_id=Cattle_Y_G00855;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48397656	48397733	.	-	.	ID=Cattle_Y_E02558;Parent=Cattle_Y_T01560;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01560;gene_id=Cattle_Y_G00855;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48397850	48397995	.	-	.	ID=Cattle_Y_E02559;Parent=Cattle_Y_T01560;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01560;gene_id=Cattle_Y_G00855;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48398091	48398202	.	-	.	ID=Cattle_Y_E02560;Parent=Cattle_Y_T01560;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01560;gene_id=Cattle_Y_G00855;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48398386	48398463	.	-	.	ID=Cattle_Y_E02561;Parent=Cattle_Y_T01560;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01560;gene_id=Cattle_Y_G00855;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48399267	48399682	.	-	.	ID=Cattle_Y_E02562;Parent=Cattle_Y_T01560;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01560;gene_id=Cattle_Y_G00855;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48399779	48399902	.	-	.	ID=Cattle_Y_E02563;Parent=Cattle_Y_T01560;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01560;gene_id=Cattle_Y_G00855;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48397656	48397733	.	-	0	ID=Cattle_Y_C02168;Parent=Cattle_Y_T01560;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_31;gene_id=Cattle_Y_G00855;transcript_id=Cattle_Y_T01560;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48397850	48397995	.	-	2	ID=Cattle_Y_C02169;Parent=Cattle_Y_T01560;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_31;gene_id=Cattle_Y_G00855;transcript_id=Cattle_Y_T01560;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48398091	48398202	.	-	0	ID=Cattle_Y_C02170;Parent=Cattle_Y_T01560;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_31;gene_id=Cattle_Y_G00855;transcript_id=Cattle_Y_T01560;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48398386	48398463	.	-	0	ID=Cattle_Y_C02171;Parent=Cattle_Y_T01560;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_31;gene_id=Cattle_Y_G00855;transcript_id=Cattle_Y_T01560;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48399267	48399682	.	-	2	ID=Cattle_Y_C02172;Parent=Cattle_Y_T01560;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_31;gene_id=Cattle_Y_G00855;transcript_id=Cattle_Y_T01560;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48399779	48399902	.	-	0	ID=Cattle_Y_C02173;Parent=Cattle_Y_T01560;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_31;gene_id=Cattle_Y_G00855;transcript_id=Cattle_Y_T01560;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48405194	48407440	.	-	.	ID=Cattle_Y_G00856;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00856;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48405194	48407440	.	-	.	ID=Cattle_Y_T01561;Parent=Cattle_Y_G00856;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01561;gene_id=Cattle_Y_G00856;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48405194	48405271	.	-	.	ID=Cattle_Y_E02564;Parent=Cattle_Y_T01561;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01561;gene_id=Cattle_Y_G00856;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48405388	48405533	.	-	.	ID=Cattle_Y_E02565;Parent=Cattle_Y_T01561;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01561;gene_id=Cattle_Y_G00856;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48405629	48405740	.	-	.	ID=Cattle_Y_E02566;Parent=Cattle_Y_T01561;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01561;gene_id=Cattle_Y_G00856;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48405924	48406001	.	-	.	ID=Cattle_Y_E02567;Parent=Cattle_Y_T01561;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01561;gene_id=Cattle_Y_G00856;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48406805	48407220	.	-	.	ID=Cattle_Y_E02568;Parent=Cattle_Y_T01561;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01561;gene_id=Cattle_Y_G00856;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48407317	48407440	.	-	.	ID=Cattle_Y_E02569;Parent=Cattle_Y_T01561;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01561;gene_id=Cattle_Y_G00856;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48405194	48405271	.	-	0	ID=Cattle_Y_C02174;Parent=Cattle_Y_T01561;gene_id=Cattle_Y_G00856;transcript_id=Cattle_Y_T01561;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48405388	48405533	.	-	2	ID=Cattle_Y_C02175;Parent=Cattle_Y_T01561;gene_id=Cattle_Y_G00856;transcript_id=Cattle_Y_T01561;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48405629	48405740	.	-	0	ID=Cattle_Y_C02176;Parent=Cattle_Y_T01561;gene_id=Cattle_Y_G00856;transcript_id=Cattle_Y_T01561;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48405924	48406001	.	-	0	ID=Cattle_Y_C02177;Parent=Cattle_Y_T01561;gene_id=Cattle_Y_G00856;transcript_id=Cattle_Y_T01561;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48406805	48407220	.	-	2	ID=Cattle_Y_C02178;Parent=Cattle_Y_T01561;gene_id=Cattle_Y_G00856;transcript_id=Cattle_Y_T01561;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48407317	48407440	.	-	0	ID=Cattle_Y_C02179;Parent=Cattle_Y_T01561;gene_id=Cattle_Y_G00856;transcript_id=Cattle_Y_T01561;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48412731	48414977	.	-	.	ID=Cattle_Y_G00857;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00857;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48412731	48414977	.	-	.	ID=Cattle_Y_T01562;Parent=Cattle_Y_G00857;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01562;gene_id=Cattle_Y_G00857;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48412731	48412808	.	-	.	ID=Cattle_Y_E02570;Parent=Cattle_Y_T01562;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01562;gene_id=Cattle_Y_G00857;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48412925	48413070	.	-	.	ID=Cattle_Y_E02571;Parent=Cattle_Y_T01562;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01562;gene_id=Cattle_Y_G00857;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48413166	48413277	.	-	.	ID=Cattle_Y_E02572;Parent=Cattle_Y_T01562;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01562;gene_id=Cattle_Y_G00857;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48413461	48413538	.	-	.	ID=Cattle_Y_E02573;Parent=Cattle_Y_T01562;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01562;gene_id=Cattle_Y_G00857;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48414342	48414757	.	-	.	ID=Cattle_Y_E02574;Parent=Cattle_Y_T01562;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01562;gene_id=Cattle_Y_G00857;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48414854	48414977	.	-	.	ID=Cattle_Y_E02575;Parent=Cattle_Y_T01562;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01562;gene_id=Cattle_Y_G00857;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48412731	48412808	.	-	0	ID=Cattle_Y_C02180;Parent=Cattle_Y_T01562;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_23;gene_id=Cattle_Y_G00857;transcript_id=Cattle_Y_T01562;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48412925	48413070	.	-	2	ID=Cattle_Y_C02181;Parent=Cattle_Y_T01562;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_23;gene_id=Cattle_Y_G00857;transcript_id=Cattle_Y_T01562;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48413166	48413277	.	-	0	ID=Cattle_Y_C02182;Parent=Cattle_Y_T01562;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_23;gene_id=Cattle_Y_G00857;transcript_id=Cattle_Y_T01562;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48413461	48413538	.	-	0	ID=Cattle_Y_C02183;Parent=Cattle_Y_T01562;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_23;gene_id=Cattle_Y_G00857;transcript_id=Cattle_Y_T01562;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48414342	48414757	.	-	2	ID=Cattle_Y_C02184;Parent=Cattle_Y_T01562;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_23;gene_id=Cattle_Y_G00857;transcript_id=Cattle_Y_T01562;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48414854	48414977	.	-	0	ID=Cattle_Y_C02185;Parent=Cattle_Y_T01562;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_23;gene_id=Cattle_Y_G00857;transcript_id=Cattle_Y_T01562;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48420268	48422514	.	-	.	ID=Cattle_Y_G00858;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00858;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48420268	48422514	.	-	.	ID=Cattle_Y_T01563;Parent=Cattle_Y_G00858;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01563;gene_id=Cattle_Y_G00858;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48420268	48420345	.	-	.	ID=Cattle_Y_E02576;Parent=Cattle_Y_T01563;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01563;gene_id=Cattle_Y_G00858;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48420462	48420607	.	-	.	ID=Cattle_Y_E02577;Parent=Cattle_Y_T01563;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01563;gene_id=Cattle_Y_G00858;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48420703	48420814	.	-	.	ID=Cattle_Y_E02578;Parent=Cattle_Y_T01563;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01563;gene_id=Cattle_Y_G00858;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48420998	48421075	.	-	.	ID=Cattle_Y_E02579;Parent=Cattle_Y_T01563;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01563;gene_id=Cattle_Y_G00858;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48421879	48422294	.	-	.	ID=Cattle_Y_E02580;Parent=Cattle_Y_T01563;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01563;gene_id=Cattle_Y_G00858;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48422391	48422514	.	-	.	ID=Cattle_Y_E02581;Parent=Cattle_Y_T01563;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01563;gene_id=Cattle_Y_G00858;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48420268	48420345	.	-	0	ID=Cattle_Y_C02186;Parent=Cattle_Y_T01563;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_21;gene_id=Cattle_Y_G00858;transcript_id=Cattle_Y_T01563;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48420462	48420607	.	-	2	ID=Cattle_Y_C02187;Parent=Cattle_Y_T01563;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_21;gene_id=Cattle_Y_G00858;transcript_id=Cattle_Y_T01563;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48420703	48420814	.	-	0	ID=Cattle_Y_C02188;Parent=Cattle_Y_T01563;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_21;gene_id=Cattle_Y_G00858;transcript_id=Cattle_Y_T01563;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48420998	48421075	.	-	0	ID=Cattle_Y_C02189;Parent=Cattle_Y_T01563;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_21;gene_id=Cattle_Y_G00858;transcript_id=Cattle_Y_T01563;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48421879	48422294	.	-	2	ID=Cattle_Y_C02190;Parent=Cattle_Y_T01563;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_21;gene_id=Cattle_Y_G00858;transcript_id=Cattle_Y_T01563;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48422391	48422514	.	-	0	ID=Cattle_Y_C02191;Parent=Cattle_Y_T01563;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_21;gene_id=Cattle_Y_G00858;transcript_id=Cattle_Y_T01563;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48427808	48430054	1644	-	.	ID=Cattle_Y_G00859;Dbxref=GeneID:132344601;Name=LOC132344601;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344601;gene_biotype=protein_coding;gene_id=Cattle_Y_G00859;source_id=gene-LOC132344601
haplotype2-0000357	CAT	mRNA	48427808	48430054	1644	-	.	ID=Cattle_Y_T01564;Parent=Cattle_Y_G00859;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;Name=XM_059884267.1;gbkey=mRNA;gene=LOC132344601;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01564;gene_id=Cattle_Y_G00859;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884267.1
haplotype2-0000357	CAT	exon	48427808	48427885	136	-	0	ID=Cattle_Y_E02582;Parent=Cattle_Y_T01564;gene_id=Cattle_Y_G00859;transcript_id=Cattle_Y_T01564;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48428002	48428147	263	-	2	ID=Cattle_Y_E02583;Parent=Cattle_Y_T01564;gene_id=Cattle_Y_G00859;transcript_id=Cattle_Y_T01564;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48428243	48428354	202	-	0	ID=Cattle_Y_E02584;Parent=Cattle_Y_T01564;gene_id=Cattle_Y_G00859;transcript_id=Cattle_Y_T01564;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48428538	48428615	133	-	0	ID=Cattle_Y_E02585;Parent=Cattle_Y_T01564;gene_id=Cattle_Y_G00859;transcript_id=Cattle_Y_T01564;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48429419	48429834	692	-	2	ID=Cattle_Y_E02586;Parent=Cattle_Y_T01564;gene_id=Cattle_Y_G00859;transcript_id=Cattle_Y_T01564;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48429931	48430054	218	-	0	ID=Cattle_Y_E02587;Parent=Cattle_Y_T01564;gene_id=Cattle_Y_G00859;transcript_id=Cattle_Y_T01564;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48427808	48427885	136	-	0	ID=Cattle_Y_C02192;Parent=Cattle_Y_T01564;gene_id=Cattle_Y_G00859;transcript_id=Cattle_Y_T01564;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48428002	48428147	263	-	2	ID=Cattle_Y_C02193;Parent=Cattle_Y_T01564;gene_id=Cattle_Y_G00859;transcript_id=Cattle_Y_T01564;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48428243	48428354	202	-	0	ID=Cattle_Y_C02194;Parent=Cattle_Y_T01564;gene_id=Cattle_Y_G00859;transcript_id=Cattle_Y_T01564;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48428538	48428615	133	-	0	ID=Cattle_Y_C02195;Parent=Cattle_Y_T01564;gene_id=Cattle_Y_G00859;transcript_id=Cattle_Y_T01564;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48429419	48429834	692	-	2	ID=Cattle_Y_C02196;Parent=Cattle_Y_T01564;gene_id=Cattle_Y_G00859;transcript_id=Cattle_Y_T01564;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48429931	48430054	218	-	0	ID=Cattle_Y_C02197;Parent=Cattle_Y_T01564;gene_id=Cattle_Y_G00859;transcript_id=Cattle_Y_T01564;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48435348	48437594	1641	-	.	ID=Cattle_Y_G00860;Dbxref=GeneID:132344586;Name=LOC132344586;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344586;gene_biotype=protein_coding;gene_id=Cattle_Y_G00860;source_id=gene-LOC132344586
haplotype2-0000357	CAT	mRNA	48435348	48437594	1641	-	.	ID=Cattle_Y_T01565;Parent=Cattle_Y_G00860;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;Name=XM_059884252.1;gbkey=mRNA;gene=LOC132344586;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01565;gene_id=Cattle_Y_G00860;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884252.1
haplotype2-0000357	CAT	exon	48435348	48435425	136	-	0	ID=Cattle_Y_E02588;Parent=Cattle_Y_T01565;gene_id=Cattle_Y_G00860;transcript_id=Cattle_Y_T01565;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48435542	48435687	263	-	2	ID=Cattle_Y_E02589;Parent=Cattle_Y_T01565;gene_id=Cattle_Y_G00860;transcript_id=Cattle_Y_T01565;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48435783	48435894	203	-	0	ID=Cattle_Y_E02590;Parent=Cattle_Y_T01565;gene_id=Cattle_Y_G00860;transcript_id=Cattle_Y_T01565;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48436078	48436155	133	-	0	ID=Cattle_Y_E02591;Parent=Cattle_Y_T01565;gene_id=Cattle_Y_G00860;transcript_id=Cattle_Y_T01565;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48436959	48437374	688	-	2	ID=Cattle_Y_E02592;Parent=Cattle_Y_T01565;gene_id=Cattle_Y_G00860;transcript_id=Cattle_Y_T01565;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48437471	48437594	218	-	0	ID=Cattle_Y_E02593;Parent=Cattle_Y_T01565;gene_id=Cattle_Y_G00860;transcript_id=Cattle_Y_T01565;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48435348	48435425	136	-	0	ID=Cattle_Y_C02198;Parent=Cattle_Y_T01565;gene_id=Cattle_Y_G00860;transcript_id=Cattle_Y_T01565;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48435542	48435687	263	-	2	ID=Cattle_Y_C02199;Parent=Cattle_Y_T01565;gene_id=Cattle_Y_G00860;transcript_id=Cattle_Y_T01565;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48435783	48435894	203	-	0	ID=Cattle_Y_C02200;Parent=Cattle_Y_T01565;gene_id=Cattle_Y_G00860;transcript_id=Cattle_Y_T01565;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48436078	48436155	133	-	0	ID=Cattle_Y_C02201;Parent=Cattle_Y_T01565;gene_id=Cattle_Y_G00860;transcript_id=Cattle_Y_T01565;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48436959	48437374	688	-	2	ID=Cattle_Y_C02202;Parent=Cattle_Y_T01565;gene_id=Cattle_Y_G00860;transcript_id=Cattle_Y_T01565;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48437471	48437594	218	-	0	ID=Cattle_Y_C02203;Parent=Cattle_Y_T01565;gene_id=Cattle_Y_G00860;transcript_id=Cattle_Y_T01565;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48442885	48445131	.	-	.	ID=Cattle_Y_G00861;Dbxref=GeneID:132344610;Name=LOC132344610;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344610;gene_biotype=protein_coding;gene_id=Cattle_Y_G00861;source_id=gene-LOC132344610
haplotype2-0000357	CAT	mRNA	48442885	48445131	.	-	.	ID=Cattle_Y_T01566;Parent=Cattle_Y_G00861;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;Name=XM_059884276.1;gbkey=mRNA;gene=LOC132344610;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01566;gene_id=Cattle_Y_G00861;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884276.1
haplotype2-0000357	CAT	exon	48442885	48442962	.	-	.	ID=Cattle_Y_E02594;Parent=Cattle_Y_T01566;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;gbkey=mRNA;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01566;gene_id=Cattle_Y_G00861;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884276.1-6
haplotype2-0000357	CAT	exon	48443079	48443224	.	-	.	ID=Cattle_Y_E02595;Parent=Cattle_Y_T01566;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;gbkey=mRNA;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01566;gene_id=Cattle_Y_G00861;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884276.1-5
haplotype2-0000357	CAT	exon	48443320	48443431	.	-	.	ID=Cattle_Y_E02596;Parent=Cattle_Y_T01566;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;gbkey=mRNA;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01566;gene_id=Cattle_Y_G00861;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884276.1-4
haplotype2-0000357	CAT	exon	48443615	48443692	.	-	.	ID=Cattle_Y_E02597;Parent=Cattle_Y_T01566;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;gbkey=mRNA;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01566;gene_id=Cattle_Y_G00861;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884276.1-3
haplotype2-0000357	CAT	exon	48444496	48444911	.	-	.	ID=Cattle_Y_E02598;Parent=Cattle_Y_T01566;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;gbkey=mRNA;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01566;gene_id=Cattle_Y_G00861;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884276.1-2
haplotype2-0000357	CAT	exon	48445008	48445131	.	-	.	ID=Cattle_Y_E02599;Parent=Cattle_Y_T01566;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;gbkey=mRNA;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01566;gene_id=Cattle_Y_G00861;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884276.1-1
haplotype2-0000357	CAT	CDS	48442885	48442962	.	-	0	ID=Cattle_Y_C02204;Parent=Cattle_Y_T01566;Dbxref=GeneID:132344610,GenBank:XP_059740259.1;Name=XP_059740259.1;gbkey=CDS;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740259.1_2;gene_id=Cattle_Y_G00861;transcript_id=Cattle_Y_T01566;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48443079	48443224	.	-	2	ID=Cattle_Y_C02205;Parent=Cattle_Y_T01566;Dbxref=GeneID:132344610,GenBank:XP_059740259.1;Name=XP_059740259.1;gbkey=CDS;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740259.1_2;gene_id=Cattle_Y_G00861;transcript_id=Cattle_Y_T01566;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48443320	48443431	.	-	0	ID=Cattle_Y_C02206;Parent=Cattle_Y_T01566;Dbxref=GeneID:132344610,GenBank:XP_059740259.1;Name=XP_059740259.1;gbkey=CDS;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740259.1_2;gene_id=Cattle_Y_G00861;transcript_id=Cattle_Y_T01566;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48443615	48443692	.	-	0	ID=Cattle_Y_C02207;Parent=Cattle_Y_T01566;Dbxref=GeneID:132344610,GenBank:XP_059740259.1;Name=XP_059740259.1;gbkey=CDS;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740259.1_2;gene_id=Cattle_Y_G00861;transcript_id=Cattle_Y_T01566;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48444496	48444911	.	-	2	ID=Cattle_Y_C02208;Parent=Cattle_Y_T01566;Dbxref=GeneID:132344610,GenBank:XP_059740259.1;Name=XP_059740259.1;gbkey=CDS;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740259.1_2;gene_id=Cattle_Y_G00861;transcript_id=Cattle_Y_T01566;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48445008	48445131	.	-	0	ID=Cattle_Y_C02209;Parent=Cattle_Y_T01566;Dbxref=GeneID:132344610,GenBank:XP_059740259.1;Name=XP_059740259.1;gbkey=CDS;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740259.1_2;gene_id=Cattle_Y_G00861;transcript_id=Cattle_Y_T01566;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48450423	48452669	.	-	.	ID=Cattle_Y_G00862;Dbxref=GeneID:132344610;Name=LOC132344610;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344610;gene_biotype=protein_coding;gene_id=Cattle_Y_G00862;source_id=gene-LOC132344610
haplotype2-0000357	CAT	mRNA	48450423	48452669	.	-	.	ID=Cattle_Y_T01567;Parent=Cattle_Y_G00862;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;Name=XM_059884276.1;gbkey=mRNA;gene=LOC132344610;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01567;gene_id=Cattle_Y_G00862;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884276.1
haplotype2-0000357	CAT	exon	48450423	48450500	.	-	.	ID=Cattle_Y_E02600;Parent=Cattle_Y_T01567;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;gbkey=mRNA;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01567;gene_id=Cattle_Y_G00862;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884276.1-6
haplotype2-0000357	CAT	exon	48450617	48450762	.	-	.	ID=Cattle_Y_E02601;Parent=Cattle_Y_T01567;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;gbkey=mRNA;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01567;gene_id=Cattle_Y_G00862;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884276.1-5
haplotype2-0000357	CAT	exon	48450858	48450969	.	-	.	ID=Cattle_Y_E02602;Parent=Cattle_Y_T01567;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;gbkey=mRNA;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01567;gene_id=Cattle_Y_G00862;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884276.1-4
haplotype2-0000357	CAT	exon	48451153	48451230	.	-	.	ID=Cattle_Y_E02603;Parent=Cattle_Y_T01567;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;gbkey=mRNA;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01567;gene_id=Cattle_Y_G00862;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884276.1-3
haplotype2-0000357	CAT	exon	48452034	48452449	.	-	.	ID=Cattle_Y_E02604;Parent=Cattle_Y_T01567;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;gbkey=mRNA;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01567;gene_id=Cattle_Y_G00862;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884276.1-2
haplotype2-0000357	CAT	exon	48452546	48452669	.	-	.	ID=Cattle_Y_E02605;Parent=Cattle_Y_T01567;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;gbkey=mRNA;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01567;gene_id=Cattle_Y_G00862;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884276.1-1
haplotype2-0000357	CAT	CDS	48450423	48450500	.	-	0	ID=Cattle_Y_C02210;Parent=Cattle_Y_T01567;Dbxref=GeneID:132344610,GenBank:XP_059740259.1;Name=XP_059740259.1;gbkey=CDS;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740259.1_1;gene_id=Cattle_Y_G00862;transcript_id=Cattle_Y_T01567;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48450617	48450762	.	-	2	ID=Cattle_Y_C02211;Parent=Cattle_Y_T01567;Dbxref=GeneID:132344610,GenBank:XP_059740259.1;Name=XP_059740259.1;gbkey=CDS;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740259.1_1;gene_id=Cattle_Y_G00862;transcript_id=Cattle_Y_T01567;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48450858	48450969	.	-	0	ID=Cattle_Y_C02212;Parent=Cattle_Y_T01567;Dbxref=GeneID:132344610,GenBank:XP_059740259.1;Name=XP_059740259.1;gbkey=CDS;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740259.1_1;gene_id=Cattle_Y_G00862;transcript_id=Cattle_Y_T01567;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48451153	48451230	.	-	0	ID=Cattle_Y_C02213;Parent=Cattle_Y_T01567;Dbxref=GeneID:132344610,GenBank:XP_059740259.1;Name=XP_059740259.1;gbkey=CDS;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740259.1_1;gene_id=Cattle_Y_G00862;transcript_id=Cattle_Y_T01567;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48452034	48452449	.	-	2	ID=Cattle_Y_C02214;Parent=Cattle_Y_T01567;Dbxref=GeneID:132344610,GenBank:XP_059740259.1;Name=XP_059740259.1;gbkey=CDS;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740259.1_1;gene_id=Cattle_Y_G00862;transcript_id=Cattle_Y_T01567;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48452546	48452669	.	-	0	ID=Cattle_Y_C02215;Parent=Cattle_Y_T01567;Dbxref=GeneID:132344610,GenBank:XP_059740259.1;Name=XP_059740259.1;gbkey=CDS;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740259.1_1;gene_id=Cattle_Y_G00862;transcript_id=Cattle_Y_T01567;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48457959	48460199	.	-	.	ID=Cattle_Y_G00863;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00863;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48457959	48460199	.	-	.	ID=Cattle_Y_T01568;Parent=Cattle_Y_G00863;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01568;gene_id=Cattle_Y_G00863;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48457959	48458036	.	-	.	ID=Cattle_Y_E02606;Parent=Cattle_Y_T01568;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01568;gene_id=Cattle_Y_G00863;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48458153	48458298	.	-	.	ID=Cattle_Y_E02607;Parent=Cattle_Y_T01568;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01568;gene_id=Cattle_Y_G00863;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48458394	48458505	.	-	.	ID=Cattle_Y_E02608;Parent=Cattle_Y_T01568;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01568;gene_id=Cattle_Y_G00863;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48458689	48458766	.	-	.	ID=Cattle_Y_E02609;Parent=Cattle_Y_T01568;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01568;gene_id=Cattle_Y_G00863;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48459564	48459979	.	-	.	ID=Cattle_Y_E02610;Parent=Cattle_Y_T01568;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01568;gene_id=Cattle_Y_G00863;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48460076	48460199	.	-	.	ID=Cattle_Y_E02611;Parent=Cattle_Y_T01568;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01568;gene_id=Cattle_Y_G00863;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48457959	48458036	.	-	0	ID=Cattle_Y_C02216;Parent=Cattle_Y_T01568;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_1;gene_id=Cattle_Y_G00863;transcript_id=Cattle_Y_T01568;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48458153	48458298	.	-	2	ID=Cattle_Y_C02217;Parent=Cattle_Y_T01568;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_1;gene_id=Cattle_Y_G00863;transcript_id=Cattle_Y_T01568;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48458394	48458505	.	-	0	ID=Cattle_Y_C02218;Parent=Cattle_Y_T01568;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_1;gene_id=Cattle_Y_G00863;transcript_id=Cattle_Y_T01568;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48458689	48458766	.	-	0	ID=Cattle_Y_C02219;Parent=Cattle_Y_T01568;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_1;gene_id=Cattle_Y_G00863;transcript_id=Cattle_Y_T01568;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48459564	48459979	.	-	2	ID=Cattle_Y_C02220;Parent=Cattle_Y_T01568;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_1;gene_id=Cattle_Y_G00863;transcript_id=Cattle_Y_T01568;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48460076	48460199	.	-	0	ID=Cattle_Y_C02221;Parent=Cattle_Y_T01568;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_1;gene_id=Cattle_Y_G00863;transcript_id=Cattle_Y_T01568;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48465490	48467736	.	-	.	ID=Cattle_Y_G00864;Dbxref=GeneID:132344610;Name=LOC132344610;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344610;gene_biotype=protein_coding;gene_id=Cattle_Y_G00864;source_id=gene-LOC132344610
haplotype2-0000357	CAT	mRNA	48465490	48467736	.	-	.	ID=Cattle_Y_T01569;Parent=Cattle_Y_G00864;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;Name=XM_059884276.1;gbkey=mRNA;gene=LOC132344610;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01569;gene_id=Cattle_Y_G00864;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884276.1
haplotype2-0000357	CAT	exon	48465490	48465567	.	-	.	ID=Cattle_Y_E02612;Parent=Cattle_Y_T01569;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;gbkey=mRNA;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01569;gene_id=Cattle_Y_G00864;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884276.1-6
haplotype2-0000357	CAT	exon	48465684	48465829	.	-	.	ID=Cattle_Y_E02613;Parent=Cattle_Y_T01569;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;gbkey=mRNA;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01569;gene_id=Cattle_Y_G00864;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884276.1-5
haplotype2-0000357	CAT	exon	48465925	48466036	.	-	.	ID=Cattle_Y_E02614;Parent=Cattle_Y_T01569;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;gbkey=mRNA;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01569;gene_id=Cattle_Y_G00864;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884276.1-4
haplotype2-0000357	CAT	exon	48466220	48466297	.	-	.	ID=Cattle_Y_E02615;Parent=Cattle_Y_T01569;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;gbkey=mRNA;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01569;gene_id=Cattle_Y_G00864;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884276.1-3
haplotype2-0000357	CAT	exon	48467101	48467516	.	-	.	ID=Cattle_Y_E02616;Parent=Cattle_Y_T01569;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;gbkey=mRNA;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01569;gene_id=Cattle_Y_G00864;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884276.1-2
haplotype2-0000357	CAT	exon	48467613	48467736	.	-	.	ID=Cattle_Y_E02617;Parent=Cattle_Y_T01569;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;gbkey=mRNA;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01569;gene_id=Cattle_Y_G00864;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884276.1-1
haplotype2-0000357	CAT	CDS	48465490	48465567	.	-	0	ID=Cattle_Y_C02222;Parent=Cattle_Y_T01569;Dbxref=GeneID:132344610,GenBank:XP_059740259.1;Name=XP_059740259.1;gbkey=CDS;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740259.1_3;gene_id=Cattle_Y_G00864;transcript_id=Cattle_Y_T01569;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48465684	48465829	.	-	2	ID=Cattle_Y_C02223;Parent=Cattle_Y_T01569;Dbxref=GeneID:132344610,GenBank:XP_059740259.1;Name=XP_059740259.1;gbkey=CDS;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740259.1_3;gene_id=Cattle_Y_G00864;transcript_id=Cattle_Y_T01569;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48465925	48466036	.	-	0	ID=Cattle_Y_C02224;Parent=Cattle_Y_T01569;Dbxref=GeneID:132344610,GenBank:XP_059740259.1;Name=XP_059740259.1;gbkey=CDS;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740259.1_3;gene_id=Cattle_Y_G00864;transcript_id=Cattle_Y_T01569;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48466220	48466297	.	-	0	ID=Cattle_Y_C02225;Parent=Cattle_Y_T01569;Dbxref=GeneID:132344610,GenBank:XP_059740259.1;Name=XP_059740259.1;gbkey=CDS;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740259.1_3;gene_id=Cattle_Y_G00864;transcript_id=Cattle_Y_T01569;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48467101	48467516	.	-	2	ID=Cattle_Y_C02226;Parent=Cattle_Y_T01569;Dbxref=GeneID:132344610,GenBank:XP_059740259.1;Name=XP_059740259.1;gbkey=CDS;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740259.1_3;gene_id=Cattle_Y_G00864;transcript_id=Cattle_Y_T01569;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48467613	48467736	.	-	0	ID=Cattle_Y_C02227;Parent=Cattle_Y_T01569;Dbxref=GeneID:132344610,GenBank:XP_059740259.1;Name=XP_059740259.1;gbkey=CDS;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740259.1_3;gene_id=Cattle_Y_G00864;transcript_id=Cattle_Y_T01569;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48473026	48475272	.	-	.	ID=Cattle_Y_G00865;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00865;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48473026	48475272	.	-	.	ID=Cattle_Y_T01570;Parent=Cattle_Y_G00865;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01570;gene_id=Cattle_Y_G00865;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48473026	48473103	.	-	.	ID=Cattle_Y_E02618;Parent=Cattle_Y_T01570;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01570;gene_id=Cattle_Y_G00865;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48473220	48473365	.	-	.	ID=Cattle_Y_E02619;Parent=Cattle_Y_T01570;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01570;gene_id=Cattle_Y_G00865;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48473461	48473572	.	-	.	ID=Cattle_Y_E02620;Parent=Cattle_Y_T01570;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01570;gene_id=Cattle_Y_G00865;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48473756	48473833	.	-	.	ID=Cattle_Y_E02621;Parent=Cattle_Y_T01570;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01570;gene_id=Cattle_Y_G00865;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48474637	48475052	.	-	.	ID=Cattle_Y_E02622;Parent=Cattle_Y_T01570;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01570;gene_id=Cattle_Y_G00865;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48475149	48475272	.	-	.	ID=Cattle_Y_E02623;Parent=Cattle_Y_T01570;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01570;gene_id=Cattle_Y_G00865;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48473026	48473103	.	-	0	ID=Cattle_Y_C02228;Parent=Cattle_Y_T01570;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_8;gene_id=Cattle_Y_G00865;transcript_id=Cattle_Y_T01570;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48473220	48473365	.	-	2	ID=Cattle_Y_C02229;Parent=Cattle_Y_T01570;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_8;gene_id=Cattle_Y_G00865;transcript_id=Cattle_Y_T01570;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48473461	48473572	.	-	0	ID=Cattle_Y_C02230;Parent=Cattle_Y_T01570;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_8;gene_id=Cattle_Y_G00865;transcript_id=Cattle_Y_T01570;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48473756	48473833	.	-	0	ID=Cattle_Y_C02231;Parent=Cattle_Y_T01570;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_8;gene_id=Cattle_Y_G00865;transcript_id=Cattle_Y_T01570;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48474637	48475052	.	-	2	ID=Cattle_Y_C02232;Parent=Cattle_Y_T01570;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_8;gene_id=Cattle_Y_G00865;transcript_id=Cattle_Y_T01570;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48475149	48475272	.	-	0	ID=Cattle_Y_C02233;Parent=Cattle_Y_T01570;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_8;gene_id=Cattle_Y_G00865;transcript_id=Cattle_Y_T01570;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48480563	48482701	.	-	.	ID=Cattle_Y_G00866;Dbxref=GeneID:132344596;Name=LOC132344596;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344596;gene_biotype=protein_coding;partial=true;start_range=.,9589988;gene_id=Cattle_Y_G00866;source_id=gene-LOC132344596
haplotype2-0000357	CAT	mRNA	48480563	48482701	.	-	.	ID=Cattle_Y_T01571;Parent=Cattle_Y_G00866;Dbxref=GeneID:132344596,GenBank:XM_059884262.1;Name=XM_059884262.1;gbkey=mRNA;gene=LOC132344596;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9589988;transcript_id=Cattle_Y_T01571;gene_id=Cattle_Y_G00866;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884262.1
haplotype2-0000357	CAT	exon	48480563	48480640	.	-	.	ID=Cattle_Y_E02624;Parent=Cattle_Y_T01571;Dbxref=GeneID:132344596,GenBank:XM_059884262.1;gbkey=mRNA;gene=LOC132344596;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01571;gene_id=Cattle_Y_G00866;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884262.1-6
haplotype2-0000357	CAT	exon	48480757	48480902	.	-	.	ID=Cattle_Y_E02625;Parent=Cattle_Y_T01571;Dbxref=GeneID:132344596,GenBank:XM_059884262.1;gbkey=mRNA;gene=LOC132344596;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01571;gene_id=Cattle_Y_G00866;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884262.1-5
haplotype2-0000357	CAT	exon	48480998	48481109	.	-	.	ID=Cattle_Y_E02626;Parent=Cattle_Y_T01571;Dbxref=GeneID:132344596,GenBank:XM_059884262.1;gbkey=mRNA;gene=LOC132344596;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01571;gene_id=Cattle_Y_G00866;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884262.1-4
haplotype2-0000357	CAT	exon	48481293	48481370	.	-	.	ID=Cattle_Y_E02627;Parent=Cattle_Y_T01571;Dbxref=GeneID:132344596,GenBank:XM_059884262.1;gbkey=mRNA;gene=LOC132344596;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01571;gene_id=Cattle_Y_G00866;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884262.1-3
haplotype2-0000357	CAT	exon	48482174	48482589	.	-	.	ID=Cattle_Y_E02628;Parent=Cattle_Y_T01571;Dbxref=GeneID:132344596,GenBank:XM_059884262.1;gbkey=mRNA;gene=LOC132344596;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01571;gene_id=Cattle_Y_G00866;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884262.1-2
haplotype2-0000357	CAT	exon	48482686	48482701	.	-	.	ID=Cattle_Y_E02629;Parent=Cattle_Y_T01571;Dbxref=GeneID:132344596,GenBank:XM_059884262.1;gbkey=mRNA;gene=LOC132344596;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9589988;transcript_id=Cattle_Y_T01571;gene_id=Cattle_Y_G00866;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884262.1-1
haplotype2-0000357	CAT	CDS	48480563	48480640	.	-	0	ID=Cattle_Y_C02234;Parent=Cattle_Y_T01571;Dbxref=GeneID:132344596,GenBank:XP_059740245.1;Name=XP_059740245.1;gbkey=CDS;gene=LOC132344596;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740245.1;gene_id=Cattle_Y_G00866;transcript_id=Cattle_Y_T01571;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48480757	48480902	.	-	2	ID=Cattle_Y_C02235;Parent=Cattle_Y_T01571;Dbxref=GeneID:132344596,GenBank:XP_059740245.1;Name=XP_059740245.1;gbkey=CDS;gene=LOC132344596;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740245.1;gene_id=Cattle_Y_G00866;transcript_id=Cattle_Y_T01571;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48480998	48481109	.	-	0	ID=Cattle_Y_C02236;Parent=Cattle_Y_T01571;Dbxref=GeneID:132344596,GenBank:XP_059740245.1;Name=XP_059740245.1;gbkey=CDS;gene=LOC132344596;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740245.1;gene_id=Cattle_Y_G00866;transcript_id=Cattle_Y_T01571;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48481293	48481370	.	-	0	ID=Cattle_Y_C02237;Parent=Cattle_Y_T01571;Dbxref=GeneID:132344596,GenBank:XP_059740245.1;Name=XP_059740245.1;gbkey=CDS;gene=LOC132344596;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740245.1;gene_id=Cattle_Y_G00866;transcript_id=Cattle_Y_T01571;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48482174	48482589	.	-	2	ID=Cattle_Y_C02238;Parent=Cattle_Y_T01571;Dbxref=GeneID:132344596,GenBank:XP_059740245.1;Name=XP_059740245.1;gbkey=CDS;gene=LOC132344596;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740245.1;gene_id=Cattle_Y_G00866;transcript_id=Cattle_Y_T01571;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48482686	48482701	.	-	0	ID=Cattle_Y_C02239;Parent=Cattle_Y_T01571;Dbxref=GeneID:132344596,GenBank:XP_059740245.1;Name=XP_059740245.1;gbkey=CDS;gene=LOC132344596;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740245.1;start_range=.,9589988;gene_id=Cattle_Y_G00866;transcript_id=Cattle_Y_T01571;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48488101	48490347	.	-	.	ID=Cattle_Y_G00867;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00867;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48488101	48490347	.	-	.	ID=Cattle_Y_T01572;Parent=Cattle_Y_G00867;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01572;gene_id=Cattle_Y_G00867;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48488101	48488178	.	-	.	ID=Cattle_Y_E02630;Parent=Cattle_Y_T01572;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01572;gene_id=Cattle_Y_G00867;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48488295	48488440	.	-	.	ID=Cattle_Y_E02631;Parent=Cattle_Y_T01572;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01572;gene_id=Cattle_Y_G00867;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48488536	48488647	.	-	.	ID=Cattle_Y_E02632;Parent=Cattle_Y_T01572;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01572;gene_id=Cattle_Y_G00867;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48488831	48488908	.	-	.	ID=Cattle_Y_E02633;Parent=Cattle_Y_T01572;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01572;gene_id=Cattle_Y_G00867;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48489712	48490127	.	-	.	ID=Cattle_Y_E02634;Parent=Cattle_Y_T01572;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01572;gene_id=Cattle_Y_G00867;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48490224	48490347	.	-	.	ID=Cattle_Y_E02635;Parent=Cattle_Y_T01572;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01572;gene_id=Cattle_Y_G00867;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48488101	48488178	.	-	0	ID=Cattle_Y_C02240;Parent=Cattle_Y_T01572;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_34;gene_id=Cattle_Y_G00867;transcript_id=Cattle_Y_T01572;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48488295	48488440	.	-	2	ID=Cattle_Y_C02241;Parent=Cattle_Y_T01572;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_34;gene_id=Cattle_Y_G00867;transcript_id=Cattle_Y_T01572;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48488536	48488647	.	-	0	ID=Cattle_Y_C02242;Parent=Cattle_Y_T01572;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_34;gene_id=Cattle_Y_G00867;transcript_id=Cattle_Y_T01572;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48488831	48488908	.	-	0	ID=Cattle_Y_C02243;Parent=Cattle_Y_T01572;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_34;gene_id=Cattle_Y_G00867;transcript_id=Cattle_Y_T01572;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48489712	48490127	.	-	2	ID=Cattle_Y_C02244;Parent=Cattle_Y_T01572;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_34;gene_id=Cattle_Y_G00867;transcript_id=Cattle_Y_T01572;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48490224	48490347	.	-	0	ID=Cattle_Y_C02245;Parent=Cattle_Y_T01572;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_34;gene_id=Cattle_Y_G00867;transcript_id=Cattle_Y_T01572;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48495639	48497885	1641	-	.	ID=Cattle_Y_G00868;Dbxref=GeneID:132344586;Name=LOC132344586;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344586;gene_biotype=protein_coding;gene_id=Cattle_Y_G00868;source_id=gene-LOC132344586
haplotype2-0000357	CAT	mRNA	48495639	48497885	1641	-	.	ID=Cattle_Y_T01573;Parent=Cattle_Y_G00868;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;Name=XM_059884252.1;gbkey=mRNA;gene=LOC132344586;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01573;gene_id=Cattle_Y_G00868;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884252.1
haplotype2-0000357	CAT	exon	48495639	48495716	136	-	0	ID=Cattle_Y_E02636;Parent=Cattle_Y_T01573;gene_id=Cattle_Y_G00868;transcript_id=Cattle_Y_T01573;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48495833	48495978	263	-	2	ID=Cattle_Y_E02637;Parent=Cattle_Y_T01573;gene_id=Cattle_Y_G00868;transcript_id=Cattle_Y_T01573;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48496074	48496185	203	-	0	ID=Cattle_Y_E02638;Parent=Cattle_Y_T01573;gene_id=Cattle_Y_G00868;transcript_id=Cattle_Y_T01573;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48496369	48496446	133	-	0	ID=Cattle_Y_E02639;Parent=Cattle_Y_T01573;gene_id=Cattle_Y_G00868;transcript_id=Cattle_Y_T01573;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48497250	48497665	688	-	2	ID=Cattle_Y_E02640;Parent=Cattle_Y_T01573;gene_id=Cattle_Y_G00868;transcript_id=Cattle_Y_T01573;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48497762	48497885	218	-	0	ID=Cattle_Y_E02641;Parent=Cattle_Y_T01573;gene_id=Cattle_Y_G00868;transcript_id=Cattle_Y_T01573;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48495639	48495716	136	-	0	ID=Cattle_Y_C02246;Parent=Cattle_Y_T01573;gene_id=Cattle_Y_G00868;transcript_id=Cattle_Y_T01573;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48495833	48495978	263	-	2	ID=Cattle_Y_C02247;Parent=Cattle_Y_T01573;gene_id=Cattle_Y_G00868;transcript_id=Cattle_Y_T01573;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48496074	48496185	203	-	0	ID=Cattle_Y_C02248;Parent=Cattle_Y_T01573;gene_id=Cattle_Y_G00868;transcript_id=Cattle_Y_T01573;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48496369	48496446	133	-	0	ID=Cattle_Y_C02249;Parent=Cattle_Y_T01573;gene_id=Cattle_Y_G00868;transcript_id=Cattle_Y_T01573;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48497250	48497665	688	-	2	ID=Cattle_Y_C02250;Parent=Cattle_Y_T01573;gene_id=Cattle_Y_G00868;transcript_id=Cattle_Y_T01573;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48497762	48497885	218	-	0	ID=Cattle_Y_C02251;Parent=Cattle_Y_T01573;gene_id=Cattle_Y_G00868;transcript_id=Cattle_Y_T01573;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48503176	48505428	1635	-	.	ID=Cattle_Y_G00869;Dbxref=GeneID:132344603;Name=LOC132344603;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344603;gene_biotype=protein_coding;gene_id=Cattle_Y_G00869;source_id=gene-LOC132344603
haplotype2-0000357	CAT	mRNA	48503176	48505428	1635	-	.	ID=Cattle_Y_T01574;Parent=Cattle_Y_G00869;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;Name=XM_059884269.1;gbkey=mRNA;gene=LOC132344603;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01574;gene_id=Cattle_Y_G00869;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884269.1
haplotype2-0000357	CAT	exon	48503176	48503253	136	-	0	ID=Cattle_Y_E02642;Parent=Cattle_Y_T01574;gene_id=Cattle_Y_G00869;transcript_id=Cattle_Y_T01574;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48503370	48503515	257	-	2	ID=Cattle_Y_E02643;Parent=Cattle_Y_T01574;gene_id=Cattle_Y_G00869;transcript_id=Cattle_Y_T01574;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48503611	48503722	202	-	0	ID=Cattle_Y_E02644;Parent=Cattle_Y_T01574;gene_id=Cattle_Y_G00869;transcript_id=Cattle_Y_T01574;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48503906	48503983	133	-	0	ID=Cattle_Y_E02645;Parent=Cattle_Y_T01574;gene_id=Cattle_Y_G00869;transcript_id=Cattle_Y_T01574;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48504793	48505208	689	-	2	ID=Cattle_Y_E02646;Parent=Cattle_Y_T01574;gene_id=Cattle_Y_G00869;transcript_id=Cattle_Y_T01574;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48505305	48505428	218	-	0	ID=Cattle_Y_E02647;Parent=Cattle_Y_T01574;gene_id=Cattle_Y_G00869;transcript_id=Cattle_Y_T01574;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48503176	48503253	136	-	0	ID=Cattle_Y_C02252;Parent=Cattle_Y_T01574;gene_id=Cattle_Y_G00869;transcript_id=Cattle_Y_T01574;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48503370	48503515	257	-	2	ID=Cattle_Y_C02253;Parent=Cattle_Y_T01574;gene_id=Cattle_Y_G00869;transcript_id=Cattle_Y_T01574;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48503611	48503722	202	-	0	ID=Cattle_Y_C02254;Parent=Cattle_Y_T01574;gene_id=Cattle_Y_G00869;transcript_id=Cattle_Y_T01574;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48503906	48503983	133	-	0	ID=Cattle_Y_C02255;Parent=Cattle_Y_T01574;gene_id=Cattle_Y_G00869;transcript_id=Cattle_Y_T01574;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48504793	48505208	689	-	2	ID=Cattle_Y_C02256;Parent=Cattle_Y_T01574;gene_id=Cattle_Y_G00869;transcript_id=Cattle_Y_T01574;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48505305	48505428	218	-	0	ID=Cattle_Y_C02257;Parent=Cattle_Y_T01574;gene_id=Cattle_Y_G00869;transcript_id=Cattle_Y_T01574;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48510722	48512962	.	-	.	ID=Cattle_Y_G00870;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00870;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48510722	48512962	.	-	.	ID=Cattle_Y_T01575;Parent=Cattle_Y_G00870;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01575;gene_id=Cattle_Y_G00870;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48510722	48510799	.	-	.	ID=Cattle_Y_E02648;Parent=Cattle_Y_T01575;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01575;gene_id=Cattle_Y_G00870;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48510916	48511061	.	-	.	ID=Cattle_Y_E02649;Parent=Cattle_Y_T01575;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01575;gene_id=Cattle_Y_G00870;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48511157	48511268	.	-	.	ID=Cattle_Y_E02650;Parent=Cattle_Y_T01575;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01575;gene_id=Cattle_Y_G00870;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48511452	48511529	.	-	.	ID=Cattle_Y_E02651;Parent=Cattle_Y_T01575;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01575;gene_id=Cattle_Y_G00870;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48512327	48512742	.	-	.	ID=Cattle_Y_E02652;Parent=Cattle_Y_T01575;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01575;gene_id=Cattle_Y_G00870;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48512839	48512962	.	-	.	ID=Cattle_Y_E02653;Parent=Cattle_Y_T01575;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01575;gene_id=Cattle_Y_G00870;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48510722	48510799	.	-	0	ID=Cattle_Y_C02258;Parent=Cattle_Y_T01575;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_25;gene_id=Cattle_Y_G00870;transcript_id=Cattle_Y_T01575;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48510916	48511061	.	-	2	ID=Cattle_Y_C02259;Parent=Cattle_Y_T01575;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_25;gene_id=Cattle_Y_G00870;transcript_id=Cattle_Y_T01575;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48511157	48511268	.	-	0	ID=Cattle_Y_C02260;Parent=Cattle_Y_T01575;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_25;gene_id=Cattle_Y_G00870;transcript_id=Cattle_Y_T01575;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48511452	48511529	.	-	0	ID=Cattle_Y_C02261;Parent=Cattle_Y_T01575;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_25;gene_id=Cattle_Y_G00870;transcript_id=Cattle_Y_T01575;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48512327	48512742	.	-	2	ID=Cattle_Y_C02262;Parent=Cattle_Y_T01575;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_25;gene_id=Cattle_Y_G00870;transcript_id=Cattle_Y_T01575;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48512839	48512962	.	-	0	ID=Cattle_Y_C02263;Parent=Cattle_Y_T01575;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_25;gene_id=Cattle_Y_G00870;transcript_id=Cattle_Y_T01575;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48525791	48528031	.	-	.	ID=Cattle_Y_G00871;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00871;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48525791	48528031	.	-	.	ID=Cattle_Y_T01576;Parent=Cattle_Y_G00871;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01576;gene_id=Cattle_Y_G00871;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48525791	48525868	.	-	.	ID=Cattle_Y_E02654;Parent=Cattle_Y_T01576;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01576;gene_id=Cattle_Y_G00871;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48525985	48526130	.	-	.	ID=Cattle_Y_E02655;Parent=Cattle_Y_T01576;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01576;gene_id=Cattle_Y_G00871;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48526226	48526337	.	-	.	ID=Cattle_Y_E02656;Parent=Cattle_Y_T01576;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01576;gene_id=Cattle_Y_G00871;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48526521	48526598	.	-	.	ID=Cattle_Y_E02657;Parent=Cattle_Y_T01576;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01576;gene_id=Cattle_Y_G00871;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48527396	48527811	.	-	.	ID=Cattle_Y_E02658;Parent=Cattle_Y_T01576;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01576;gene_id=Cattle_Y_G00871;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48527908	48528031	.	-	.	ID=Cattle_Y_E02659;Parent=Cattle_Y_T01576;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01576;gene_id=Cattle_Y_G00871;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48525791	48525868	.	-	0	ID=Cattle_Y_C02264;Parent=Cattle_Y_T01576;gene_id=Cattle_Y_G00871;transcript_id=Cattle_Y_T01576;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48525985	48526130	.	-	2	ID=Cattle_Y_C02265;Parent=Cattle_Y_T01576;gene_id=Cattle_Y_G00871;transcript_id=Cattle_Y_T01576;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48526226	48526337	.	-	0	ID=Cattle_Y_C02266;Parent=Cattle_Y_T01576;gene_id=Cattle_Y_G00871;transcript_id=Cattle_Y_T01576;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48526521	48526598	.	-	0	ID=Cattle_Y_C02267;Parent=Cattle_Y_T01576;gene_id=Cattle_Y_G00871;transcript_id=Cattle_Y_T01576;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48527396	48527811	.	-	2	ID=Cattle_Y_C02268;Parent=Cattle_Y_T01576;gene_id=Cattle_Y_G00871;transcript_id=Cattle_Y_T01576;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48527908	48528031	.	-	0	ID=Cattle_Y_C02269;Parent=Cattle_Y_T01576;gene_id=Cattle_Y_G00871;transcript_id=Cattle_Y_T01576;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48533322	48535454	.	-	.	ID=Cattle_Y_G00872;Dbxref=GeneID:132344592;Name=LOC132344592;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344592;gene_biotype=protein_coding;partial=true;start_range=.,9508707;gene_id=Cattle_Y_G00872;source_id=gene-LOC132344592
haplotype2-0000357	CAT	mRNA	48533322	48535454	.	-	.	ID=Cattle_Y_T01577;Parent=Cattle_Y_G00872;Dbxref=GeneID:132344592,GenBank:XM_059884258.1;Name=XM_059884258.1;gbkey=mRNA;gene=LOC132344592;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9508707;transcript_id=Cattle_Y_T01577;gene_id=Cattle_Y_G00872;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884258.1
haplotype2-0000357	CAT	exon	48533322	48533399	.	-	.	ID=Cattle_Y_E02660;Parent=Cattle_Y_T01577;Dbxref=GeneID:132344592,GenBank:XM_059884258.1;gbkey=mRNA;gene=LOC132344592;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01577;gene_id=Cattle_Y_G00872;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884258.1-6
haplotype2-0000357	CAT	exon	48533516	48533661	.	-	.	ID=Cattle_Y_E02661;Parent=Cattle_Y_T01577;Dbxref=GeneID:132344592,GenBank:XM_059884258.1;gbkey=mRNA;gene=LOC132344592;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01577;gene_id=Cattle_Y_G00872;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884258.1-5
haplotype2-0000357	CAT	exon	48533757	48533868	.	-	.	ID=Cattle_Y_E02662;Parent=Cattle_Y_T01577;Dbxref=GeneID:132344592,GenBank:XM_059884258.1;gbkey=mRNA;gene=LOC132344592;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01577;gene_id=Cattle_Y_G00872;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884258.1-4
haplotype2-0000357	CAT	exon	48534052	48534129	.	-	.	ID=Cattle_Y_E02663;Parent=Cattle_Y_T01577;Dbxref=GeneID:132344592,GenBank:XM_059884258.1;gbkey=mRNA;gene=LOC132344592;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01577;gene_id=Cattle_Y_G00872;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884258.1-3
haplotype2-0000357	CAT	exon	48534927	48535342	.	-	.	ID=Cattle_Y_E02664;Parent=Cattle_Y_T01577;Dbxref=GeneID:132344592,GenBank:XM_059884258.1;gbkey=mRNA;gene=LOC132344592;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01577;gene_id=Cattle_Y_G00872;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884258.1-2
haplotype2-0000357	CAT	exon	48535439	48535454	.	-	.	ID=Cattle_Y_E02665;Parent=Cattle_Y_T01577;Dbxref=GeneID:132344592,GenBank:XM_059884258.1;gbkey=mRNA;gene=LOC132344592;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9508707;transcript_id=Cattle_Y_T01577;gene_id=Cattle_Y_G00872;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884258.1-1
haplotype2-0000357	CAT	CDS	48533322	48533399	.	-	0	ID=Cattle_Y_C02270;Parent=Cattle_Y_T01577;Dbxref=GeneID:132344592,GenBank:XP_059740241.1;Name=XP_059740241.1;gbkey=CDS;gene=LOC132344592;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740241.1;gene_id=Cattle_Y_G00872;transcript_id=Cattle_Y_T01577;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48533516	48533661	.	-	2	ID=Cattle_Y_C02271;Parent=Cattle_Y_T01577;Dbxref=GeneID:132344592,GenBank:XP_059740241.1;Name=XP_059740241.1;gbkey=CDS;gene=LOC132344592;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740241.1;gene_id=Cattle_Y_G00872;transcript_id=Cattle_Y_T01577;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48533757	48533868	.	-	0	ID=Cattle_Y_C02272;Parent=Cattle_Y_T01577;Dbxref=GeneID:132344592,GenBank:XP_059740241.1;Name=XP_059740241.1;gbkey=CDS;gene=LOC132344592;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740241.1;gene_id=Cattle_Y_G00872;transcript_id=Cattle_Y_T01577;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48534052	48534129	.	-	0	ID=Cattle_Y_C02273;Parent=Cattle_Y_T01577;Dbxref=GeneID:132344592,GenBank:XP_059740241.1;Name=XP_059740241.1;gbkey=CDS;gene=LOC132344592;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740241.1;gene_id=Cattle_Y_G00872;transcript_id=Cattle_Y_T01577;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48534927	48535342	.	-	2	ID=Cattle_Y_C02274;Parent=Cattle_Y_T01577;Dbxref=GeneID:132344592,GenBank:XP_059740241.1;Name=XP_059740241.1;gbkey=CDS;gene=LOC132344592;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740241.1;gene_id=Cattle_Y_G00872;transcript_id=Cattle_Y_T01577;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48535439	48535454	.	-	0	ID=Cattle_Y_C02275;Parent=Cattle_Y_T01577;Dbxref=GeneID:132344592,GenBank:XP_059740241.1;Name=XP_059740241.1;gbkey=CDS;gene=LOC132344592;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740241.1;start_range=.,9508707;gene_id=Cattle_Y_G00872;transcript_id=Cattle_Y_T01577;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48540854	48543100	.	-	.	ID=Cattle_Y_G00873;Dbxref=GeneID:132344601;Name=LOC132344601;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344601;gene_biotype=protein_coding;gene_id=Cattle_Y_G00873;source_id=gene-LOC132344601
haplotype2-0000357	CAT	mRNA	48540854	48543100	.	-	.	ID=Cattle_Y_T01578;Parent=Cattle_Y_G00873;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;Name=XM_059884267.1;gbkey=mRNA;gene=LOC132344601;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01578;gene_id=Cattle_Y_G00873;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884267.1
haplotype2-0000357	CAT	exon	48540854	48540931	.	-	.	ID=Cattle_Y_E02666;Parent=Cattle_Y_T01578;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01578;gene_id=Cattle_Y_G00873;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-6
haplotype2-0000357	CAT	exon	48541048	48541193	.	-	.	ID=Cattle_Y_E02667;Parent=Cattle_Y_T01578;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01578;gene_id=Cattle_Y_G00873;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-5
haplotype2-0000357	CAT	exon	48541289	48541400	.	-	.	ID=Cattle_Y_E02668;Parent=Cattle_Y_T01578;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01578;gene_id=Cattle_Y_G00873;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-4
haplotype2-0000357	CAT	exon	48541584	48541661	.	-	.	ID=Cattle_Y_E02669;Parent=Cattle_Y_T01578;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01578;gene_id=Cattle_Y_G00873;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-3
haplotype2-0000357	CAT	exon	48542465	48542880	.	-	.	ID=Cattle_Y_E02670;Parent=Cattle_Y_T01578;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01578;gene_id=Cattle_Y_G00873;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-2
haplotype2-0000357	CAT	exon	48542977	48543100	.	-	.	ID=Cattle_Y_E02671;Parent=Cattle_Y_T01578;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01578;gene_id=Cattle_Y_G00873;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-1
haplotype2-0000357	CAT	CDS	48540854	48540931	.	-	0	ID=Cattle_Y_C02276;Parent=Cattle_Y_T01578;Dbxref=GeneID:132344601,GenBank:XP_059740250.1;Name=XP_059740250.1;gbkey=CDS;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740250.1_2;gene_id=Cattle_Y_G00873;transcript_id=Cattle_Y_T01578;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48541048	48541193	.	-	2	ID=Cattle_Y_C02277;Parent=Cattle_Y_T01578;Dbxref=GeneID:132344601,GenBank:XP_059740250.1;Name=XP_059740250.1;gbkey=CDS;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740250.1_2;gene_id=Cattle_Y_G00873;transcript_id=Cattle_Y_T01578;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48541289	48541400	.	-	0	ID=Cattle_Y_C02278;Parent=Cattle_Y_T01578;Dbxref=GeneID:132344601,GenBank:XP_059740250.1;Name=XP_059740250.1;gbkey=CDS;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740250.1_2;gene_id=Cattle_Y_G00873;transcript_id=Cattle_Y_T01578;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48541584	48541661	.	-	0	ID=Cattle_Y_C02279;Parent=Cattle_Y_T01578;Dbxref=GeneID:132344601,GenBank:XP_059740250.1;Name=XP_059740250.1;gbkey=CDS;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740250.1_2;gene_id=Cattle_Y_G00873;transcript_id=Cattle_Y_T01578;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48542465	48542880	.	-	2	ID=Cattle_Y_C02280;Parent=Cattle_Y_T01578;Dbxref=GeneID:132344601,GenBank:XP_059740250.1;Name=XP_059740250.1;gbkey=CDS;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740250.1_2;gene_id=Cattle_Y_G00873;transcript_id=Cattle_Y_T01578;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48542977	48543100	.	-	0	ID=Cattle_Y_C02281;Parent=Cattle_Y_T01578;Dbxref=GeneID:132344601,GenBank:XP_059740250.1;Name=XP_059740250.1;gbkey=CDS;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740250.1_2;gene_id=Cattle_Y_G00873;transcript_id=Cattle_Y_T01578;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48548394	48550646	1635	-	.	ID=Cattle_Y_G00874;Dbxref=GeneID:132344603;Name=LOC132344603;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344603;gene_biotype=protein_coding;gene_id=Cattle_Y_G00874;source_id=gene-LOC132344603
haplotype2-0000357	CAT	mRNA	48548394	48550646	1635	-	.	ID=Cattle_Y_T01579;Parent=Cattle_Y_G00874;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;Name=XM_059884269.1;gbkey=mRNA;gene=LOC132344603;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01579;gene_id=Cattle_Y_G00874;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884269.1
haplotype2-0000357	CAT	exon	48548394	48548471	136	-	0	ID=Cattle_Y_E02672;Parent=Cattle_Y_T01579;gene_id=Cattle_Y_G00874;transcript_id=Cattle_Y_T01579;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48548588	48548733	257	-	2	ID=Cattle_Y_E02673;Parent=Cattle_Y_T01579;gene_id=Cattle_Y_G00874;transcript_id=Cattle_Y_T01579;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48548829	48548940	202	-	0	ID=Cattle_Y_E02674;Parent=Cattle_Y_T01579;gene_id=Cattle_Y_G00874;transcript_id=Cattle_Y_T01579;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48549124	48549201	133	-	0	ID=Cattle_Y_E02675;Parent=Cattle_Y_T01579;gene_id=Cattle_Y_G00874;transcript_id=Cattle_Y_T01579;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48550011	48550426	689	-	2	ID=Cattle_Y_E02676;Parent=Cattle_Y_T01579;gene_id=Cattle_Y_G00874;transcript_id=Cattle_Y_T01579;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48550523	48550646	218	-	0	ID=Cattle_Y_E02677;Parent=Cattle_Y_T01579;gene_id=Cattle_Y_G00874;transcript_id=Cattle_Y_T01579;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48548394	48548471	136	-	0	ID=Cattle_Y_C02282;Parent=Cattle_Y_T01579;gene_id=Cattle_Y_G00874;transcript_id=Cattle_Y_T01579;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48548588	48548733	257	-	2	ID=Cattle_Y_C02283;Parent=Cattle_Y_T01579;gene_id=Cattle_Y_G00874;transcript_id=Cattle_Y_T01579;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48548829	48548940	202	-	0	ID=Cattle_Y_C02284;Parent=Cattle_Y_T01579;gene_id=Cattle_Y_G00874;transcript_id=Cattle_Y_T01579;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48549124	48549201	133	-	0	ID=Cattle_Y_C02285;Parent=Cattle_Y_T01579;gene_id=Cattle_Y_G00874;transcript_id=Cattle_Y_T01579;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48550011	48550426	689	-	2	ID=Cattle_Y_C02286;Parent=Cattle_Y_T01579;gene_id=Cattle_Y_G00874;transcript_id=Cattle_Y_T01579;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48550523	48550646	218	-	0	ID=Cattle_Y_C02287;Parent=Cattle_Y_T01579;gene_id=Cattle_Y_G00874;transcript_id=Cattle_Y_T01579;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48555938	48558070	.	-	.	ID=Cattle_Y_G00875;Dbxref=GeneID:132344595;Name=LOC132344595;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344595;gene_biotype=protein_coding;partial=true;start_range=.,9582590;gene_id=Cattle_Y_G00875;source_id=gene-LOC132344595
haplotype2-0000357	CAT	mRNA	48555938	48558070	.	-	.	ID=Cattle_Y_T01580;Parent=Cattle_Y_G00875;Dbxref=GeneID:132344595,GenBank:XM_059884261.1;Name=XM_059884261.1;gbkey=mRNA;gene=LOC132344595;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9582590;transcript_id=Cattle_Y_T01580;gene_id=Cattle_Y_G00875;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884261.1
haplotype2-0000357	CAT	exon	48555938	48556015	.	-	.	ID=Cattle_Y_E02678;Parent=Cattle_Y_T01580;Dbxref=GeneID:132344595,GenBank:XM_059884261.1;gbkey=mRNA;gene=LOC132344595;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01580;gene_id=Cattle_Y_G00875;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884261.1-6
haplotype2-0000357	CAT	exon	48556132	48556277	.	-	.	ID=Cattle_Y_E02679;Parent=Cattle_Y_T01580;Dbxref=GeneID:132344595,GenBank:XM_059884261.1;gbkey=mRNA;gene=LOC132344595;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01580;gene_id=Cattle_Y_G00875;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884261.1-5
haplotype2-0000357	CAT	exon	48556373	48556484	.	-	.	ID=Cattle_Y_E02680;Parent=Cattle_Y_T01580;Dbxref=GeneID:132344595,GenBank:XM_059884261.1;gbkey=mRNA;gene=LOC132344595;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01580;gene_id=Cattle_Y_G00875;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884261.1-4
haplotype2-0000357	CAT	exon	48556668	48556745	.	-	.	ID=Cattle_Y_E02681;Parent=Cattle_Y_T01580;Dbxref=GeneID:132344595,GenBank:XM_059884261.1;gbkey=mRNA;gene=LOC132344595;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01580;gene_id=Cattle_Y_G00875;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884261.1-3
haplotype2-0000357	CAT	exon	48557543	48557958	.	-	.	ID=Cattle_Y_E02682;Parent=Cattle_Y_T01580;Dbxref=GeneID:132344595,GenBank:XM_059884261.1;gbkey=mRNA;gene=LOC132344595;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01580;gene_id=Cattle_Y_G00875;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884261.1-2
haplotype2-0000357	CAT	exon	48558055	48558070	.	-	.	ID=Cattle_Y_E02683;Parent=Cattle_Y_T01580;Dbxref=GeneID:132344595,GenBank:XM_059884261.1;gbkey=mRNA;gene=LOC132344595;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9582590;transcript_id=Cattle_Y_T01580;gene_id=Cattle_Y_G00875;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884261.1-1
haplotype2-0000357	CAT	CDS	48555938	48556015	.	-	0	ID=Cattle_Y_C02288;Parent=Cattle_Y_T01580;Dbxref=GeneID:132344595,GenBank:XP_059740244.1;Name=XP_059740244.1;gbkey=CDS;gene=LOC132344595;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740244.1;gene_id=Cattle_Y_G00875;transcript_id=Cattle_Y_T01580;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48556132	48556277	.	-	2	ID=Cattle_Y_C02289;Parent=Cattle_Y_T01580;Dbxref=GeneID:132344595,GenBank:XP_059740244.1;Name=XP_059740244.1;gbkey=CDS;gene=LOC132344595;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740244.1;gene_id=Cattle_Y_G00875;transcript_id=Cattle_Y_T01580;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48556373	48556484	.	-	0	ID=Cattle_Y_C02290;Parent=Cattle_Y_T01580;Dbxref=GeneID:132344595,GenBank:XP_059740244.1;Name=XP_059740244.1;gbkey=CDS;gene=LOC132344595;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740244.1;gene_id=Cattle_Y_G00875;transcript_id=Cattle_Y_T01580;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48556668	48556745	.	-	0	ID=Cattle_Y_C02291;Parent=Cattle_Y_T01580;Dbxref=GeneID:132344595,GenBank:XP_059740244.1;Name=XP_059740244.1;gbkey=CDS;gene=LOC132344595;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740244.1;gene_id=Cattle_Y_G00875;transcript_id=Cattle_Y_T01580;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48557543	48557958	.	-	2	ID=Cattle_Y_C02292;Parent=Cattle_Y_T01580;Dbxref=GeneID:132344595,GenBank:XP_059740244.1;Name=XP_059740244.1;gbkey=CDS;gene=LOC132344595;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740244.1;gene_id=Cattle_Y_G00875;transcript_id=Cattle_Y_T01580;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48558055	48558070	.	-	0	ID=Cattle_Y_C02293;Parent=Cattle_Y_T01580;Dbxref=GeneID:132344595,GenBank:XP_059740244.1;Name=XP_059740244.1;gbkey=CDS;gene=LOC132344595;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740244.1;start_range=.,9582590;gene_id=Cattle_Y_G00875;transcript_id=Cattle_Y_T01580;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48571002	48573248	1635	-	.	ID=Cattle_Y_G00876;Dbxref=GeneID:132344603;Name=LOC132344603;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344603;gene_biotype=protein_coding;gene_id=Cattle_Y_G00876;source_id=gene-LOC132344603
haplotype2-0000357	CAT	mRNA	48571002	48573248	1635	-	.	ID=Cattle_Y_T01581;Parent=Cattle_Y_G00876;Dbxref=GeneID:132344603,GenBank:XM_059884269.1;Name=XM_059884269.1;gbkey=mRNA;gene=LOC132344603;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01581;gene_id=Cattle_Y_G00876;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884269.1
haplotype2-0000357	CAT	exon	48571002	48571079	136	-	0	ID=Cattle_Y_E02684;Parent=Cattle_Y_T01581;gene_id=Cattle_Y_G00876;transcript_id=Cattle_Y_T01581;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48571196	48571341	257	-	2	ID=Cattle_Y_E02685;Parent=Cattle_Y_T01581;gene_id=Cattle_Y_G00876;transcript_id=Cattle_Y_T01581;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48571437	48571548	202	-	0	ID=Cattle_Y_E02686;Parent=Cattle_Y_T01581;gene_id=Cattle_Y_G00876;transcript_id=Cattle_Y_T01581;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48571732	48571809	133	-	0	ID=Cattle_Y_E02687;Parent=Cattle_Y_T01581;gene_id=Cattle_Y_G00876;transcript_id=Cattle_Y_T01581;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48572613	48573028	689	-	2	ID=Cattle_Y_E02688;Parent=Cattle_Y_T01581;gene_id=Cattle_Y_G00876;transcript_id=Cattle_Y_T01581;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	48573125	48573248	218	-	0	ID=Cattle_Y_E02689;Parent=Cattle_Y_T01581;gene_id=Cattle_Y_G00876;transcript_id=Cattle_Y_T01581;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48571002	48571079	136	-	0	ID=Cattle_Y_C02294;Parent=Cattle_Y_T01581;gene_id=Cattle_Y_G00876;transcript_id=Cattle_Y_T01581;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48571196	48571341	257	-	2	ID=Cattle_Y_C02295;Parent=Cattle_Y_T01581;gene_id=Cattle_Y_G00876;transcript_id=Cattle_Y_T01581;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48571437	48571548	202	-	0	ID=Cattle_Y_C02296;Parent=Cattle_Y_T01581;gene_id=Cattle_Y_G00876;transcript_id=Cattle_Y_T01581;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48571732	48571809	133	-	0	ID=Cattle_Y_C02297;Parent=Cattle_Y_T01581;gene_id=Cattle_Y_G00876;transcript_id=Cattle_Y_T01581;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48572613	48573028	689	-	2	ID=Cattle_Y_C02298;Parent=Cattle_Y_T01581;gene_id=Cattle_Y_G00876;transcript_id=Cattle_Y_T01581;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48573125	48573248	218	-	0	ID=Cattle_Y_C02299;Parent=Cattle_Y_T01581;gene_id=Cattle_Y_G00876;transcript_id=Cattle_Y_T01581;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48578541	48580673	.	-	.	ID=Cattle_Y_G00877;Dbxref=GeneID:132344575;Name=LOC132344575;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344575;gene_biotype=protein_coding;partial=true;start_range=.,9228925;gene_id=Cattle_Y_G00877;source_id=gene-LOC132344575
haplotype2-0000357	CAT	mRNA	48578541	48580673	.	-	.	ID=Cattle_Y_T01582;Parent=Cattle_Y_G00877;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;Name=XM_059884240.1;gbkey=mRNA;gene=LOC132344575;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01582;gene_id=Cattle_Y_G00877;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884240.1
haplotype2-0000357	CAT	exon	48578541	48578618	.	-	.	ID=Cattle_Y_E02690;Parent=Cattle_Y_T01582;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01582;gene_id=Cattle_Y_G00877;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-6
haplotype2-0000357	CAT	exon	48578735	48578880	.	-	.	ID=Cattle_Y_E02691;Parent=Cattle_Y_T01582;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01582;gene_id=Cattle_Y_G00877;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-5
haplotype2-0000357	CAT	exon	48578976	48579087	.	-	.	ID=Cattle_Y_E02692;Parent=Cattle_Y_T01582;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01582;gene_id=Cattle_Y_G00877;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-4
haplotype2-0000357	CAT	exon	48579271	48579348	.	-	.	ID=Cattle_Y_E02693;Parent=Cattle_Y_T01582;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01582;gene_id=Cattle_Y_G00877;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-3
haplotype2-0000357	CAT	exon	48580146	48580561	.	-	.	ID=Cattle_Y_E02694;Parent=Cattle_Y_T01582;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01582;gene_id=Cattle_Y_G00877;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-2
haplotype2-0000357	CAT	exon	48580658	48580673	.	-	.	ID=Cattle_Y_E02695;Parent=Cattle_Y_T01582;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01582;gene_id=Cattle_Y_G00877;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-1
haplotype2-0000357	CAT	CDS	48578541	48578618	.	-	0	ID=Cattle_Y_C02300;Parent=Cattle_Y_T01582;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_1;gene_id=Cattle_Y_G00877;transcript_id=Cattle_Y_T01582;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48578735	48578880	.	-	2	ID=Cattle_Y_C02301;Parent=Cattle_Y_T01582;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_1;gene_id=Cattle_Y_G00877;transcript_id=Cattle_Y_T01582;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48578976	48579087	.	-	0	ID=Cattle_Y_C02302;Parent=Cattle_Y_T01582;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_1;gene_id=Cattle_Y_G00877;transcript_id=Cattle_Y_T01582;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48579271	48579348	.	-	0	ID=Cattle_Y_C02303;Parent=Cattle_Y_T01582;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_1;gene_id=Cattle_Y_G00877;transcript_id=Cattle_Y_T01582;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48580146	48580561	.	-	2	ID=Cattle_Y_C02304;Parent=Cattle_Y_T01582;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_1;gene_id=Cattle_Y_G00877;transcript_id=Cattle_Y_T01582;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48580658	48580673	.	-	0	ID=Cattle_Y_C02305;Parent=Cattle_Y_T01582;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_1;start_range=.,9228925;gene_id=Cattle_Y_G00877;transcript_id=Cattle_Y_T01582;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48586075	48588327	.	-	.	ID=Cattle_Y_G00878;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00878;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48586075	48588327	.	-	.	ID=Cattle_Y_T01583;Parent=Cattle_Y_G00878;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01583;gene_id=Cattle_Y_G00878;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48586075	48586152	.	-	.	ID=Cattle_Y_E02696;Parent=Cattle_Y_T01583;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01583;gene_id=Cattle_Y_G00878;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48586269	48586414	.	-	.	ID=Cattle_Y_E02697;Parent=Cattle_Y_T01583;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01583;gene_id=Cattle_Y_G00878;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48586510	48586621	.	-	.	ID=Cattle_Y_E02698;Parent=Cattle_Y_T01583;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01583;gene_id=Cattle_Y_G00878;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48586805	48586882	.	-	.	ID=Cattle_Y_E02699;Parent=Cattle_Y_T01583;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01583;gene_id=Cattle_Y_G00878;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48587692	48588107	.	-	.	ID=Cattle_Y_E02700;Parent=Cattle_Y_T01583;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01583;gene_id=Cattle_Y_G00878;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48588204	48588327	.	-	.	ID=Cattle_Y_E02701;Parent=Cattle_Y_T01583;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01583;gene_id=Cattle_Y_G00878;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48586075	48586152	.	-	0	ID=Cattle_Y_C02306;Parent=Cattle_Y_T01583;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_24;gene_id=Cattle_Y_G00878;transcript_id=Cattle_Y_T01583;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48586269	48586414	.	-	2	ID=Cattle_Y_C02307;Parent=Cattle_Y_T01583;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_24;gene_id=Cattle_Y_G00878;transcript_id=Cattle_Y_T01583;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48586510	48586621	.	-	0	ID=Cattle_Y_C02308;Parent=Cattle_Y_T01583;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_24;gene_id=Cattle_Y_G00878;transcript_id=Cattle_Y_T01583;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48586805	48586882	.	-	0	ID=Cattle_Y_C02309;Parent=Cattle_Y_T01583;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_24;gene_id=Cattle_Y_G00878;transcript_id=Cattle_Y_T01583;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48587692	48588107	.	-	2	ID=Cattle_Y_C02310;Parent=Cattle_Y_T01583;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_24;gene_id=Cattle_Y_G00878;transcript_id=Cattle_Y_T01583;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48588204	48588327	.	-	0	ID=Cattle_Y_C02311;Parent=Cattle_Y_T01583;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_24;gene_id=Cattle_Y_G00878;transcript_id=Cattle_Y_T01583;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48593618	48595870	.	-	.	ID=Cattle_Y_G00879;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00879;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48593618	48595870	.	-	.	ID=Cattle_Y_T01584;Parent=Cattle_Y_G00879;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01584;gene_id=Cattle_Y_G00879;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48593618	48593695	.	-	.	ID=Cattle_Y_E02702;Parent=Cattle_Y_T01584;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01584;gene_id=Cattle_Y_G00879;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48593812	48593957	.	-	.	ID=Cattle_Y_E02703;Parent=Cattle_Y_T01584;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01584;gene_id=Cattle_Y_G00879;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48594053	48594164	.	-	.	ID=Cattle_Y_E02704;Parent=Cattle_Y_T01584;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01584;gene_id=Cattle_Y_G00879;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48594348	48594425	.	-	.	ID=Cattle_Y_E02705;Parent=Cattle_Y_T01584;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01584;gene_id=Cattle_Y_G00879;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48595235	48595650	.	-	.	ID=Cattle_Y_E02706;Parent=Cattle_Y_T01584;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01584;gene_id=Cattle_Y_G00879;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48595747	48595870	.	-	.	ID=Cattle_Y_E02707;Parent=Cattle_Y_T01584;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01584;gene_id=Cattle_Y_G00879;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48593618	48593695	.	-	0	ID=Cattle_Y_C02312;Parent=Cattle_Y_T01584;gene_id=Cattle_Y_G00879;transcript_id=Cattle_Y_T01584;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48593812	48593957	.	-	2	ID=Cattle_Y_C02313;Parent=Cattle_Y_T01584;gene_id=Cattle_Y_G00879;transcript_id=Cattle_Y_T01584;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48594053	48594164	.	-	0	ID=Cattle_Y_C02314;Parent=Cattle_Y_T01584;gene_id=Cattle_Y_G00879;transcript_id=Cattle_Y_T01584;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48594348	48594425	.	-	0	ID=Cattle_Y_C02315;Parent=Cattle_Y_T01584;gene_id=Cattle_Y_G00879;transcript_id=Cattle_Y_T01584;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48595235	48595650	.	-	2	ID=Cattle_Y_C02316;Parent=Cattle_Y_T01584;gene_id=Cattle_Y_G00879;transcript_id=Cattle_Y_T01584;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48595747	48595870	.	-	0	ID=Cattle_Y_C02317;Parent=Cattle_Y_T01584;gene_id=Cattle_Y_G00879;transcript_id=Cattle_Y_T01584;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48601161	48603407	.	-	.	ID=Cattle_Y_G00880;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00880;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48601161	48603407	.	-	.	ID=Cattle_Y_T01585;Parent=Cattle_Y_G00880;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01585;gene_id=Cattle_Y_G00880;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48601161	48601238	.	-	.	ID=Cattle_Y_E02708;Parent=Cattle_Y_T01585;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01585;gene_id=Cattle_Y_G00880;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48601355	48601500	.	-	.	ID=Cattle_Y_E02709;Parent=Cattle_Y_T01585;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01585;gene_id=Cattle_Y_G00880;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48601596	48601707	.	-	.	ID=Cattle_Y_E02710;Parent=Cattle_Y_T01585;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01585;gene_id=Cattle_Y_G00880;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48601891	48601968	.	-	.	ID=Cattle_Y_E02711;Parent=Cattle_Y_T01585;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01585;gene_id=Cattle_Y_G00880;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48602772	48603187	.	-	.	ID=Cattle_Y_E02712;Parent=Cattle_Y_T01585;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01585;gene_id=Cattle_Y_G00880;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48603284	48603407	.	-	.	ID=Cattle_Y_E02713;Parent=Cattle_Y_T01585;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01585;gene_id=Cattle_Y_G00880;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48601161	48601238	.	-	0	ID=Cattle_Y_C02318;Parent=Cattle_Y_T01585;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_16;gene_id=Cattle_Y_G00880;transcript_id=Cattle_Y_T01585;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48601355	48601500	.	-	2	ID=Cattle_Y_C02319;Parent=Cattle_Y_T01585;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_16;gene_id=Cattle_Y_G00880;transcript_id=Cattle_Y_T01585;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48601596	48601707	.	-	0	ID=Cattle_Y_C02320;Parent=Cattle_Y_T01585;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_16;gene_id=Cattle_Y_G00880;transcript_id=Cattle_Y_T01585;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48601891	48601968	.	-	0	ID=Cattle_Y_C02321;Parent=Cattle_Y_T01585;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_16;gene_id=Cattle_Y_G00880;transcript_id=Cattle_Y_T01585;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48602772	48603187	.	-	2	ID=Cattle_Y_C02322;Parent=Cattle_Y_T01585;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_16;gene_id=Cattle_Y_G00880;transcript_id=Cattle_Y_T01585;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48603284	48603407	.	-	0	ID=Cattle_Y_C02323;Parent=Cattle_Y_T01585;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1_16;gene_id=Cattle_Y_G00880;transcript_id=Cattle_Y_T01585;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48608703	48610841	.	-	.	ID=Cattle_Y_G00881;Dbxref=GeneID:132344587;Name=LOC132344587;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344587;gene_biotype=protein_coding;partial=true;start_range=.,9435132;gene_id=Cattle_Y_G00881;source_id=gene-LOC132344587
haplotype2-0000357	CAT	mRNA	48608703	48610841	.	-	.	ID=Cattle_Y_T01586;Parent=Cattle_Y_G00881;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;Name=XM_059884253.1;gbkey=mRNA;gene=LOC132344587;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9435132;transcript_id=Cattle_Y_T01586;gene_id=Cattle_Y_G00881;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884253.1
haplotype2-0000357	CAT	exon	48608703	48608780	.	-	.	ID=Cattle_Y_E02714;Parent=Cattle_Y_T01586;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01586;gene_id=Cattle_Y_G00881;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-6
haplotype2-0000357	CAT	exon	48608897	48609042	.	-	.	ID=Cattle_Y_E02715;Parent=Cattle_Y_T01586;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01586;gene_id=Cattle_Y_G00881;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-5
haplotype2-0000357	CAT	exon	48609138	48609249	.	-	.	ID=Cattle_Y_E02716;Parent=Cattle_Y_T01586;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01586;gene_id=Cattle_Y_G00881;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-4
haplotype2-0000357	CAT	exon	48609433	48609510	.	-	.	ID=Cattle_Y_E02717;Parent=Cattle_Y_T01586;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01586;gene_id=Cattle_Y_G00881;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-3
haplotype2-0000357	CAT	exon	48610314	48610729	.	-	.	ID=Cattle_Y_E02718;Parent=Cattle_Y_T01586;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01586;gene_id=Cattle_Y_G00881;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-2
haplotype2-0000357	CAT	exon	48610826	48610841	.	-	.	ID=Cattle_Y_E02719;Parent=Cattle_Y_T01586;Dbxref=GeneID:132344587,GenBank:XM_059884253.1;gbkey=mRNA;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9435132;transcript_id=Cattle_Y_T01586;gene_id=Cattle_Y_G00881;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884253.1-1
haplotype2-0000357	CAT	CDS	48608703	48608780	.	-	0	ID=Cattle_Y_C02324;Parent=Cattle_Y_T01586;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1;gene_id=Cattle_Y_G00881;transcript_id=Cattle_Y_T01586;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48608897	48609042	.	-	2	ID=Cattle_Y_C02325;Parent=Cattle_Y_T01586;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1;gene_id=Cattle_Y_G00881;transcript_id=Cattle_Y_T01586;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48609138	48609249	.	-	0	ID=Cattle_Y_C02326;Parent=Cattle_Y_T01586;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1;gene_id=Cattle_Y_G00881;transcript_id=Cattle_Y_T01586;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48609433	48609510	.	-	0	ID=Cattle_Y_C02327;Parent=Cattle_Y_T01586;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1;gene_id=Cattle_Y_G00881;transcript_id=Cattle_Y_T01586;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48610314	48610729	.	-	2	ID=Cattle_Y_C02328;Parent=Cattle_Y_T01586;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1;gene_id=Cattle_Y_G00881;transcript_id=Cattle_Y_T01586;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48610826	48610841	.	-	0	ID=Cattle_Y_C02329;Parent=Cattle_Y_T01586;Dbxref=GeneID:132344587,GenBank:XP_059740236.1;Name=XP_059740236.1;gbkey=CDS;gene=LOC132344587;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740236.1;start_range=.,9435132;gene_id=Cattle_Y_G00881;transcript_id=Cattle_Y_T01586;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48616240	48618486	.	-	.	ID=Cattle_Y_G00882;Dbxref=GeneID:132344613;Name=LOC132344613;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344613;gene_biotype=protein_coding;gene_id=Cattle_Y_G00882;source_id=gene-LOC132344613
haplotype2-0000357	CAT	mRNA	48616240	48618486	.	-	.	ID=Cattle_Y_T01587;Parent=Cattle_Y_G00882;Dbxref=GeneID:132344613,GenBank:XM_059884279.1;Name=XM_059884279.1;gbkey=mRNA;gene=LOC132344613;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01587;gene_id=Cattle_Y_G00882;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884279.1
haplotype2-0000357	CAT	exon	48616240	48616317	.	-	.	ID=Cattle_Y_E02720;Parent=Cattle_Y_T01587;Dbxref=GeneID:132344613,GenBank:XM_059884279.1;gbkey=mRNA;gene=LOC132344613;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01587;gene_id=Cattle_Y_G00882;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884279.1-6
haplotype2-0000357	CAT	exon	48616434	48616579	.	-	.	ID=Cattle_Y_E02721;Parent=Cattle_Y_T01587;Dbxref=GeneID:132344613,GenBank:XM_059884279.1;gbkey=mRNA;gene=LOC132344613;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01587;gene_id=Cattle_Y_G00882;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884279.1-6
haplotype2-0000357	CAT	exon	48616675	48616786	.	-	.	ID=Cattle_Y_E02722;Parent=Cattle_Y_T01587;Dbxref=GeneID:132344613,GenBank:XM_059884279.1;gbkey=mRNA;gene=LOC132344613;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01587;gene_id=Cattle_Y_G00882;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884279.1-6
haplotype2-0000357	CAT	exon	48616970	48617047	.	-	.	ID=Cattle_Y_E02723;Parent=Cattle_Y_T01587;Dbxref=GeneID:132344613,GenBank:XM_059884279.1;gbkey=mRNA;gene=LOC132344613;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01587;gene_id=Cattle_Y_G00882;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884279.1-6
haplotype2-0000357	CAT	exon	48617851	48618266	.	-	.	ID=Cattle_Y_E02724;Parent=Cattle_Y_T01587;Dbxref=GeneID:132344613,GenBank:XM_059884279.1;gbkey=mRNA;gene=LOC132344613;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01587;gene_id=Cattle_Y_G00882;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884279.1-6
haplotype2-0000357	CAT	exon	48618363	48618486	.	-	.	ID=Cattle_Y_E02725;Parent=Cattle_Y_T01587;Dbxref=GeneID:132344613,GenBank:XM_059884279.1;gbkey=mRNA;gene=LOC132344613;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01587;gene_id=Cattle_Y_G00882;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884279.1-1
haplotype2-0000357	CAT	CDS	48616240	48616317	.	-	0	ID=Cattle_Y_C02330;Parent=Cattle_Y_T01587;gene_id=Cattle_Y_G00882;transcript_id=Cattle_Y_T01587;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48616434	48616579	.	-	2	ID=Cattle_Y_C02331;Parent=Cattle_Y_T01587;gene_id=Cattle_Y_G00882;transcript_id=Cattle_Y_T01587;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48616675	48616786	.	-	0	ID=Cattle_Y_C02332;Parent=Cattle_Y_T01587;gene_id=Cattle_Y_G00882;transcript_id=Cattle_Y_T01587;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48616970	48617047	.	-	0	ID=Cattle_Y_C02333;Parent=Cattle_Y_T01587;gene_id=Cattle_Y_G00882;transcript_id=Cattle_Y_T01587;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48617851	48618266	.	-	2	ID=Cattle_Y_C02334;Parent=Cattle_Y_T01587;gene_id=Cattle_Y_G00882;transcript_id=Cattle_Y_T01587;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48618363	48618486	.	-	0	ID=Cattle_Y_C02335;Parent=Cattle_Y_T01587;gene_id=Cattle_Y_G00882;transcript_id=Cattle_Y_T01587;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48631318	48633438	.	-	.	ID=Cattle_Y_G00883;Dbxref=GeneID:132344588;Name=LOC132344588;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344588;gene_biotype=protein_coding;partial=true;start_range=.,9442531;gene_id=Cattle_Y_G00883;source_id=gene-LOC132344588
haplotype2-0000357	CAT	mRNA	48631318	48633438	.	-	.	ID=Cattle_Y_T01588;Parent=Cattle_Y_G00883;Dbxref=GeneID:132344588,GenBank:XM_059884254.1;Name=XM_059884254.1;gbkey=mRNA;gene=LOC132344588;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9442531;transcript_id=Cattle_Y_T01588;gene_id=Cattle_Y_G00883;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884254.1
haplotype2-0000357	CAT	exon	48631318	48631395	.	-	.	ID=Cattle_Y_E02726;Parent=Cattle_Y_T01588;Dbxref=GeneID:132344588,GenBank:XM_059884254.1;gbkey=mRNA;gene=LOC132344588;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01588;gene_id=Cattle_Y_G00883;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884254.1-6
haplotype2-0000357	CAT	exon	48631512	48631657	.	-	.	ID=Cattle_Y_E02727;Parent=Cattle_Y_T01588;Dbxref=GeneID:132344588,GenBank:XM_059884254.1;gbkey=mRNA;gene=LOC132344588;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01588;gene_id=Cattle_Y_G00883;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884254.1-5
haplotype2-0000357	CAT	exon	48631753	48631864	.	-	.	ID=Cattle_Y_E02728;Parent=Cattle_Y_T01588;Dbxref=GeneID:132344588,GenBank:XM_059884254.1;gbkey=mRNA;gene=LOC132344588;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01588;gene_id=Cattle_Y_G00883;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884254.1-4
haplotype2-0000357	CAT	exon	48632048	48632125	.	-	.	ID=Cattle_Y_E02729;Parent=Cattle_Y_T01588;Dbxref=GeneID:132344588,GenBank:XM_059884254.1;gbkey=mRNA;gene=LOC132344588;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01588;gene_id=Cattle_Y_G00883;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884254.1-3
haplotype2-0000357	CAT	exon	48632911	48633326	.	-	.	ID=Cattle_Y_E02730;Parent=Cattle_Y_T01588;Dbxref=GeneID:132344588,GenBank:XM_059884254.1;gbkey=mRNA;gene=LOC132344588;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01588;gene_id=Cattle_Y_G00883;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884254.1-2
haplotype2-0000357	CAT	exon	48633423	48633438	.	-	.	ID=Cattle_Y_E02731;Parent=Cattle_Y_T01588;Dbxref=GeneID:132344588,GenBank:XM_059884254.1;gbkey=mRNA;gene=LOC132344588;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9442531;transcript_id=Cattle_Y_T01588;gene_id=Cattle_Y_G00883;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884254.1-1
haplotype2-0000357	CAT	CDS	48631318	48631395	.	-	0	ID=Cattle_Y_C02336;Parent=Cattle_Y_T01588;Dbxref=GeneID:132344588,GenBank:XP_059740237.1;Name=XP_059740237.1;gbkey=CDS;gene=LOC132344588;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740237.1;gene_id=Cattle_Y_G00883;transcript_id=Cattle_Y_T01588;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48631512	48631657	.	-	2	ID=Cattle_Y_C02337;Parent=Cattle_Y_T01588;Dbxref=GeneID:132344588,GenBank:XP_059740237.1;Name=XP_059740237.1;gbkey=CDS;gene=LOC132344588;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740237.1;gene_id=Cattle_Y_G00883;transcript_id=Cattle_Y_T01588;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48631753	48631864	.	-	0	ID=Cattle_Y_C02338;Parent=Cattle_Y_T01588;Dbxref=GeneID:132344588,GenBank:XP_059740237.1;Name=XP_059740237.1;gbkey=CDS;gene=LOC132344588;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740237.1;gene_id=Cattle_Y_G00883;transcript_id=Cattle_Y_T01588;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48632048	48632125	.	-	0	ID=Cattle_Y_C02339;Parent=Cattle_Y_T01588;Dbxref=GeneID:132344588,GenBank:XP_059740237.1;Name=XP_059740237.1;gbkey=CDS;gene=LOC132344588;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740237.1;gene_id=Cattle_Y_G00883;transcript_id=Cattle_Y_T01588;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48632911	48633326	.	-	2	ID=Cattle_Y_C02340;Parent=Cattle_Y_T01588;Dbxref=GeneID:132344588,GenBank:XP_059740237.1;Name=XP_059740237.1;gbkey=CDS;gene=LOC132344588;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740237.1;gene_id=Cattle_Y_G00883;transcript_id=Cattle_Y_T01588;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48633423	48633438	.	-	0	ID=Cattle_Y_C02341;Parent=Cattle_Y_T01588;Dbxref=GeneID:132344588,GenBank:XP_059740237.1;Name=XP_059740237.1;gbkey=CDS;gene=LOC132344588;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740237.1;start_range=.,9442531;gene_id=Cattle_Y_G00883;transcript_id=Cattle_Y_T01588;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48653907	48656039	.	-	.	ID=Cattle_Y_G00884;Dbxref=GeneID:132344575;Name=LOC132344575;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344575;gene_biotype=protein_coding;partial=true;start_range=.,9228925;gene_id=Cattle_Y_G00884;source_id=gene-LOC132344575
haplotype2-0000357	CAT	mRNA	48653907	48656039	.	-	.	ID=Cattle_Y_T01589;Parent=Cattle_Y_G00884;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;Name=XM_059884240.1;gbkey=mRNA;gene=LOC132344575;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01589;gene_id=Cattle_Y_G00884;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884240.1
haplotype2-0000357	CAT	exon	48653907	48653984	.	-	.	ID=Cattle_Y_E02732;Parent=Cattle_Y_T01589;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01589;gene_id=Cattle_Y_G00884;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-6
haplotype2-0000357	CAT	exon	48654101	48654246	.	-	.	ID=Cattle_Y_E02733;Parent=Cattle_Y_T01589;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01589;gene_id=Cattle_Y_G00884;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-5
haplotype2-0000357	CAT	exon	48654342	48654453	.	-	.	ID=Cattle_Y_E02734;Parent=Cattle_Y_T01589;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01589;gene_id=Cattle_Y_G00884;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-4
haplotype2-0000357	CAT	exon	48654637	48654714	.	-	.	ID=Cattle_Y_E02735;Parent=Cattle_Y_T01589;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01589;gene_id=Cattle_Y_G00884;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-3
haplotype2-0000357	CAT	exon	48655512	48655927	.	-	.	ID=Cattle_Y_E02736;Parent=Cattle_Y_T01589;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01589;gene_id=Cattle_Y_G00884;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-2
haplotype2-0000357	CAT	exon	48656024	48656039	.	-	.	ID=Cattle_Y_E02737;Parent=Cattle_Y_T01589;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01589;gene_id=Cattle_Y_G00884;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-1
haplotype2-0000357	CAT	CDS	48653907	48653984	.	-	0	ID=Cattle_Y_C02342;Parent=Cattle_Y_T01589;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_2;gene_id=Cattle_Y_G00884;transcript_id=Cattle_Y_T01589;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48654101	48654246	.	-	2	ID=Cattle_Y_C02343;Parent=Cattle_Y_T01589;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_2;gene_id=Cattle_Y_G00884;transcript_id=Cattle_Y_T01589;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48654342	48654453	.	-	0	ID=Cattle_Y_C02344;Parent=Cattle_Y_T01589;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_2;gene_id=Cattle_Y_G00884;transcript_id=Cattle_Y_T01589;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48654637	48654714	.	-	0	ID=Cattle_Y_C02345;Parent=Cattle_Y_T01589;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_2;gene_id=Cattle_Y_G00884;transcript_id=Cattle_Y_T01589;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48655512	48655927	.	-	2	ID=Cattle_Y_C02346;Parent=Cattle_Y_T01589;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_2;gene_id=Cattle_Y_G00884;transcript_id=Cattle_Y_T01589;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48656024	48656039	.	-	0	ID=Cattle_Y_C02347;Parent=Cattle_Y_T01589;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_2;start_range=.,9228925;gene_id=Cattle_Y_G00884;transcript_id=Cattle_Y_T01589;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48661438	48663690	.	-	.	ID=Cattle_Y_G00885;Dbxref=GeneID:132344599;Name=LOC132344599;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344599;gene_biotype=protein_coding;gene_id=Cattle_Y_G00885;source_id=gene-LOC132344599
haplotype2-0000357	CAT	mRNA	48661438	48663690	.	-	.	ID=Cattle_Y_T01590;Parent=Cattle_Y_G00885;Dbxref=GeneID:132344599,GenBank:XM_059884265.1;Name=XM_059884265.1;gbkey=mRNA;gene=LOC132344599;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01590;gene_id=Cattle_Y_G00885;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884265.1
haplotype2-0000357	CAT	exon	48661438	48661515	.	-	.	ID=Cattle_Y_E02738;Parent=Cattle_Y_T01590;Dbxref=GeneID:132344599,GenBank:XM_059884265.1;gbkey=mRNA;gene=LOC132344599;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01590;gene_id=Cattle_Y_G00885;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884265.1-6
haplotype2-0000357	CAT	exon	48661632	48661777	.	-	.	ID=Cattle_Y_E02739;Parent=Cattle_Y_T01590;Dbxref=GeneID:132344599,GenBank:XM_059884265.1;gbkey=mRNA;gene=LOC132344599;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01590;gene_id=Cattle_Y_G00885;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884265.1-5
haplotype2-0000357	CAT	exon	48661873	48661984	.	-	.	ID=Cattle_Y_E02740;Parent=Cattle_Y_T01590;Dbxref=GeneID:132344599,GenBank:XM_059884265.1;gbkey=mRNA;gene=LOC132344599;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01590;gene_id=Cattle_Y_G00885;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884265.1-4
haplotype2-0000357	CAT	exon	48662168	48662245	.	-	.	ID=Cattle_Y_E02741;Parent=Cattle_Y_T01590;Dbxref=GeneID:132344599,GenBank:XM_059884265.1;gbkey=mRNA;gene=LOC132344599;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01590;gene_id=Cattle_Y_G00885;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884265.1-3
haplotype2-0000357	CAT	exon	48663055	48663470	.	-	.	ID=Cattle_Y_E02742;Parent=Cattle_Y_T01590;Dbxref=GeneID:132344599,GenBank:XM_059884265.1;gbkey=mRNA;gene=LOC132344599;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01590;gene_id=Cattle_Y_G00885;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884265.1-2
haplotype2-0000357	CAT	exon	48663567	48663690	.	-	.	ID=Cattle_Y_E02743;Parent=Cattle_Y_T01590;Dbxref=GeneID:132344599,GenBank:XM_059884265.1;gbkey=mRNA;gene=LOC132344599;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01590;gene_id=Cattle_Y_G00885;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884265.1-1
haplotype2-0000357	CAT	CDS	48661438	48661515	.	-	0	ID=Cattle_Y_C02348;Parent=Cattle_Y_T01590;Dbxref=GeneID:132344599,GenBank:XP_059740248.1;Name=XP_059740248.1;gbkey=CDS;gene=LOC132344599;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740248.1;gene_id=Cattle_Y_G00885;transcript_id=Cattle_Y_T01590;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48661632	48661777	.	-	2	ID=Cattle_Y_C02349;Parent=Cattle_Y_T01590;Dbxref=GeneID:132344599,GenBank:XP_059740248.1;Name=XP_059740248.1;gbkey=CDS;gene=LOC132344599;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740248.1;gene_id=Cattle_Y_G00885;transcript_id=Cattle_Y_T01590;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48661873	48661984	.	-	0	ID=Cattle_Y_C02350;Parent=Cattle_Y_T01590;Dbxref=GeneID:132344599,GenBank:XP_059740248.1;Name=XP_059740248.1;gbkey=CDS;gene=LOC132344599;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740248.1;gene_id=Cattle_Y_G00885;transcript_id=Cattle_Y_T01590;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48662168	48662245	.	-	0	ID=Cattle_Y_C02351;Parent=Cattle_Y_T01590;Dbxref=GeneID:132344599,GenBank:XP_059740248.1;Name=XP_059740248.1;gbkey=CDS;gene=LOC132344599;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740248.1;gene_id=Cattle_Y_G00885;transcript_id=Cattle_Y_T01590;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48663055	48663470	.	-	2	ID=Cattle_Y_C02352;Parent=Cattle_Y_T01590;Dbxref=GeneID:132344599,GenBank:XP_059740248.1;Name=XP_059740248.1;gbkey=CDS;gene=LOC132344599;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740248.1;gene_id=Cattle_Y_G00885;transcript_id=Cattle_Y_T01590;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48663567	48663690	.	-	0	ID=Cattle_Y_C02353;Parent=Cattle_Y_T01590;Dbxref=GeneID:132344599,GenBank:XP_059740248.1;Name=XP_059740248.1;gbkey=CDS;gene=LOC132344599;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740248.1;gene_id=Cattle_Y_G00885;transcript_id=Cattle_Y_T01590;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48668981	48671119	.	-	.	ID=Cattle_Y_G00886;Dbxref=GeneID:132344594;Name=LOC132344594;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344594;gene_biotype=protein_coding;partial=true;start_range=.,9523501;gene_id=Cattle_Y_G00886;source_id=gene-LOC132344594
haplotype2-0000357	CAT	mRNA	48668981	48671119	.	-	.	ID=Cattle_Y_T01591;Parent=Cattle_Y_G00886;Dbxref=GeneID:132344594,GenBank:XM_059884260.1;Name=XM_059884260.1;gbkey=mRNA;gene=LOC132344594;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9523501;transcript_id=Cattle_Y_T01591;gene_id=Cattle_Y_G00886;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884260.1
haplotype2-0000357	CAT	exon	48668981	48669058	.	-	.	ID=Cattle_Y_E02744;Parent=Cattle_Y_T01591;Dbxref=GeneID:132344594,GenBank:XM_059884260.1;gbkey=mRNA;gene=LOC132344594;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01591;gene_id=Cattle_Y_G00886;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884260.1-6
haplotype2-0000357	CAT	exon	48669175	48669320	.	-	.	ID=Cattle_Y_E02745;Parent=Cattle_Y_T01591;Dbxref=GeneID:132344594,GenBank:XM_059884260.1;gbkey=mRNA;gene=LOC132344594;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01591;gene_id=Cattle_Y_G00886;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884260.1-5
haplotype2-0000357	CAT	exon	48669416	48669527	.	-	.	ID=Cattle_Y_E02746;Parent=Cattle_Y_T01591;Dbxref=GeneID:132344594,GenBank:XM_059884260.1;gbkey=mRNA;gene=LOC132344594;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01591;gene_id=Cattle_Y_G00886;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884260.1-4
haplotype2-0000357	CAT	exon	48669711	48669788	.	-	.	ID=Cattle_Y_E02747;Parent=Cattle_Y_T01591;Dbxref=GeneID:132344594,GenBank:XM_059884260.1;gbkey=mRNA;gene=LOC132344594;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01591;gene_id=Cattle_Y_G00886;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884260.1-3
haplotype2-0000357	CAT	exon	48670592	48671007	.	-	.	ID=Cattle_Y_E02748;Parent=Cattle_Y_T01591;Dbxref=GeneID:132344594,GenBank:XM_059884260.1;gbkey=mRNA;gene=LOC132344594;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01591;gene_id=Cattle_Y_G00886;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884260.1-2
haplotype2-0000357	CAT	exon	48671104	48671119	.	-	.	ID=Cattle_Y_E02749;Parent=Cattle_Y_T01591;Dbxref=GeneID:132344594,GenBank:XM_059884260.1;gbkey=mRNA;gene=LOC132344594;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9523501;transcript_id=Cattle_Y_T01591;gene_id=Cattle_Y_G00886;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884260.1-1
haplotype2-0000357	CAT	CDS	48668981	48669058	.	-	0	ID=Cattle_Y_C02354;Parent=Cattle_Y_T01591;Dbxref=GeneID:132344594,GenBank:XP_059740243.1;Name=XP_059740243.1;gbkey=CDS;gene=LOC132344594;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740243.1;gene_id=Cattle_Y_G00886;transcript_id=Cattle_Y_T01591;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48669175	48669320	.	-	2	ID=Cattle_Y_C02355;Parent=Cattle_Y_T01591;Dbxref=GeneID:132344594,GenBank:XP_059740243.1;Name=XP_059740243.1;gbkey=CDS;gene=LOC132344594;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740243.1;gene_id=Cattle_Y_G00886;transcript_id=Cattle_Y_T01591;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48669416	48669527	.	-	0	ID=Cattle_Y_C02356;Parent=Cattle_Y_T01591;Dbxref=GeneID:132344594,GenBank:XP_059740243.1;Name=XP_059740243.1;gbkey=CDS;gene=LOC132344594;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740243.1;gene_id=Cattle_Y_G00886;transcript_id=Cattle_Y_T01591;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48669711	48669788	.	-	0	ID=Cattle_Y_C02357;Parent=Cattle_Y_T01591;Dbxref=GeneID:132344594,GenBank:XP_059740243.1;Name=XP_059740243.1;gbkey=CDS;gene=LOC132344594;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740243.1;gene_id=Cattle_Y_G00886;transcript_id=Cattle_Y_T01591;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48670592	48671007	.	-	2	ID=Cattle_Y_C02358;Parent=Cattle_Y_T01591;Dbxref=GeneID:132344594,GenBank:XP_059740243.1;Name=XP_059740243.1;gbkey=CDS;gene=LOC132344594;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740243.1;gene_id=Cattle_Y_G00886;transcript_id=Cattle_Y_T01591;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48671104	48671119	.	-	0	ID=Cattle_Y_C02359;Parent=Cattle_Y_T01591;Dbxref=GeneID:132344594,GenBank:XP_059740243.1;Name=XP_059740243.1;gbkey=CDS;gene=LOC132344594;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740243.1;start_range=.,9523501;gene_id=Cattle_Y_G00886;transcript_id=Cattle_Y_T01591;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48676522	48678768	.	-	.	ID=Cattle_Y_G00887;Dbxref=GeneID:132344612;Name=LOC132344612;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344612;gene_biotype=protein_coding;gene_id=Cattle_Y_G00887;source_id=gene-LOC132344612
haplotype2-0000357	CAT	mRNA	48676522	48678768	.	-	.	ID=Cattle_Y_T01592;Parent=Cattle_Y_G00887;Dbxref=GeneID:132344612,GenBank:XM_059884278.1;Name=XM_059884278.1;gbkey=mRNA;gene=LOC132344612;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01592;gene_id=Cattle_Y_G00887;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884278.1
haplotype2-0000357	CAT	exon	48676522	48676599	.	-	.	ID=Cattle_Y_E02750;Parent=Cattle_Y_T01592;Dbxref=GeneID:132344612,GenBank:XM_059884278.1;gbkey=mRNA;gene=LOC132344612;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01592;gene_id=Cattle_Y_G00887;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884278.1-6
haplotype2-0000357	CAT	exon	48676716	48676861	.	-	.	ID=Cattle_Y_E02751;Parent=Cattle_Y_T01592;Dbxref=GeneID:132344612,GenBank:XM_059884278.1;gbkey=mRNA;gene=LOC132344612;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01592;gene_id=Cattle_Y_G00887;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884278.1-6
haplotype2-0000357	CAT	exon	48676957	48677068	.	-	.	ID=Cattle_Y_E02752;Parent=Cattle_Y_T01592;Dbxref=GeneID:132344612,GenBank:XM_059884278.1;gbkey=mRNA;gene=LOC132344612;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01592;gene_id=Cattle_Y_G00887;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884278.1-6
haplotype2-0000357	CAT	exon	48677252	48677329	.	-	.	ID=Cattle_Y_E02753;Parent=Cattle_Y_T01592;Dbxref=GeneID:132344612,GenBank:XM_059884278.1;gbkey=mRNA;gene=LOC132344612;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01592;gene_id=Cattle_Y_G00887;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884278.1-6
haplotype2-0000357	CAT	exon	48678133	48678548	.	-	.	ID=Cattle_Y_E02754;Parent=Cattle_Y_T01592;Dbxref=GeneID:132344612,GenBank:XM_059884278.1;gbkey=mRNA;gene=LOC132344612;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01592;gene_id=Cattle_Y_G00887;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884278.1-6
haplotype2-0000357	CAT	exon	48678645	48678768	.	-	.	ID=Cattle_Y_E02755;Parent=Cattle_Y_T01592;Dbxref=GeneID:132344612,GenBank:XM_059884278.1;gbkey=mRNA;gene=LOC132344612;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01592;gene_id=Cattle_Y_G00887;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884278.1-1
haplotype2-0000357	CAT	CDS	48676522	48676599	.	-	0	ID=Cattle_Y_C02360;Parent=Cattle_Y_T01592;gene_id=Cattle_Y_G00887;transcript_id=Cattle_Y_T01592;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48676716	48676861	.	-	2	ID=Cattle_Y_C02361;Parent=Cattle_Y_T01592;gene_id=Cattle_Y_G00887;transcript_id=Cattle_Y_T01592;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48676957	48677068	.	-	0	ID=Cattle_Y_C02362;Parent=Cattle_Y_T01592;gene_id=Cattle_Y_G00887;transcript_id=Cattle_Y_T01592;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48677252	48677329	.	-	0	ID=Cattle_Y_C02363;Parent=Cattle_Y_T01592;gene_id=Cattle_Y_G00887;transcript_id=Cattle_Y_T01592;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48678133	48678548	.	-	2	ID=Cattle_Y_C02364;Parent=Cattle_Y_T01592;gene_id=Cattle_Y_G00887;transcript_id=Cattle_Y_T01592;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48678645	48678768	.	-	0	ID=Cattle_Y_C02365;Parent=Cattle_Y_T01592;gene_id=Cattle_Y_G00887;transcript_id=Cattle_Y_T01592;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48684060	48686192	.	-	.	ID=Cattle_Y_G00888;Dbxref=GeneID:132344590;Name=LOC132344590;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344590;gene_biotype=protein_coding;partial=true;start_range=.,9457325;gene_id=Cattle_Y_G00888;source_id=gene-LOC132344590
haplotype2-0000357	CAT	mRNA	48684060	48686192	.	-	.	ID=Cattle_Y_T01593;Parent=Cattle_Y_G00888;Dbxref=GeneID:132344590,GenBank:XM_059884256.1;Name=XM_059884256.1;gbkey=mRNA;gene=LOC132344590;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9457325;transcript_id=Cattle_Y_T01593;gene_id=Cattle_Y_G00888;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884256.1
haplotype2-0000357	CAT	exon	48684060	48684137	.	-	.	ID=Cattle_Y_E02756;Parent=Cattle_Y_T01593;Dbxref=GeneID:132344590,GenBank:XM_059884256.1;gbkey=mRNA;gene=LOC132344590;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01593;gene_id=Cattle_Y_G00888;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884256.1-6
haplotype2-0000357	CAT	exon	48684254	48684399	.	-	.	ID=Cattle_Y_E02757;Parent=Cattle_Y_T01593;Dbxref=GeneID:132344590,GenBank:XM_059884256.1;gbkey=mRNA;gene=LOC132344590;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01593;gene_id=Cattle_Y_G00888;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884256.1-5
haplotype2-0000357	CAT	exon	48684495	48684606	.	-	.	ID=Cattle_Y_E02758;Parent=Cattle_Y_T01593;Dbxref=GeneID:132344590,GenBank:XM_059884256.1;gbkey=mRNA;gene=LOC132344590;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01593;gene_id=Cattle_Y_G00888;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884256.1-4
haplotype2-0000357	CAT	exon	48684790	48684867	.	-	.	ID=Cattle_Y_E02759;Parent=Cattle_Y_T01593;Dbxref=GeneID:132344590,GenBank:XM_059884256.1;gbkey=mRNA;gene=LOC132344590;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01593;gene_id=Cattle_Y_G00888;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884256.1-3
haplotype2-0000357	CAT	exon	48685665	48686080	.	-	.	ID=Cattle_Y_E02760;Parent=Cattle_Y_T01593;Dbxref=GeneID:132344590,GenBank:XM_059884256.1;gbkey=mRNA;gene=LOC132344590;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01593;gene_id=Cattle_Y_G00888;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884256.1-2
haplotype2-0000357	CAT	exon	48686177	48686192	.	-	.	ID=Cattle_Y_E02761;Parent=Cattle_Y_T01593;Dbxref=GeneID:132344590,GenBank:XM_059884256.1;gbkey=mRNA;gene=LOC132344590;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9457325;transcript_id=Cattle_Y_T01593;gene_id=Cattle_Y_G00888;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884256.1-1
haplotype2-0000357	CAT	CDS	48684060	48684137	.	-	0	ID=Cattle_Y_C02366;Parent=Cattle_Y_T01593;Dbxref=GeneID:132344590,GenBank:XP_059740239.1;Name=XP_059740239.1;gbkey=CDS;gene=LOC132344590;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740239.1;gene_id=Cattle_Y_G00888;transcript_id=Cattle_Y_T01593;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48684254	48684399	.	-	2	ID=Cattle_Y_C02367;Parent=Cattle_Y_T01593;Dbxref=GeneID:132344590,GenBank:XP_059740239.1;Name=XP_059740239.1;gbkey=CDS;gene=LOC132344590;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740239.1;gene_id=Cattle_Y_G00888;transcript_id=Cattle_Y_T01593;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48684495	48684606	.	-	0	ID=Cattle_Y_C02368;Parent=Cattle_Y_T01593;Dbxref=GeneID:132344590,GenBank:XP_059740239.1;Name=XP_059740239.1;gbkey=CDS;gene=LOC132344590;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740239.1;gene_id=Cattle_Y_G00888;transcript_id=Cattle_Y_T01593;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48684790	48684867	.	-	0	ID=Cattle_Y_C02369;Parent=Cattle_Y_T01593;Dbxref=GeneID:132344590,GenBank:XP_059740239.1;Name=XP_059740239.1;gbkey=CDS;gene=LOC132344590;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740239.1;gene_id=Cattle_Y_G00888;transcript_id=Cattle_Y_T01593;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48685665	48686080	.	-	2	ID=Cattle_Y_C02370;Parent=Cattle_Y_T01593;Dbxref=GeneID:132344590,GenBank:XP_059740239.1;Name=XP_059740239.1;gbkey=CDS;gene=LOC132344590;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740239.1;gene_id=Cattle_Y_G00888;transcript_id=Cattle_Y_T01593;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48686177	48686192	.	-	0	ID=Cattle_Y_C02371;Parent=Cattle_Y_T01593;Dbxref=GeneID:132344590,GenBank:XP_059740239.1;Name=XP_059740239.1;gbkey=CDS;gene=LOC132344590;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740239.1;start_range=.,9457325;gene_id=Cattle_Y_G00888;transcript_id=Cattle_Y_T01593;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48699126	48701258	.	-	.	ID=Cattle_Y_G00889;Dbxref=GeneID:132344589;Name=LOC132344589;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344589;gene_biotype=protein_coding;partial=true;start_range=.,9449928;gene_id=Cattle_Y_G00889;source_id=gene-LOC132344589
haplotype2-0000357	CAT	mRNA	48699126	48701258	.	-	.	ID=Cattle_Y_T01594;Parent=Cattle_Y_G00889;Dbxref=GeneID:132344589,GenBank:XM_059884255.1;Name=XM_059884255.1;gbkey=mRNA;gene=LOC132344589;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9449928;transcript_id=Cattle_Y_T01594;gene_id=Cattle_Y_G00889;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884255.1
haplotype2-0000357	CAT	exon	48699126	48699203	.	-	.	ID=Cattle_Y_E02762;Parent=Cattle_Y_T01594;Dbxref=GeneID:132344589,GenBank:XM_059884255.1;gbkey=mRNA;gene=LOC132344589;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01594;gene_id=Cattle_Y_G00889;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884255.1-6
haplotype2-0000357	CAT	exon	48699320	48699465	.	-	.	ID=Cattle_Y_E02763;Parent=Cattle_Y_T01594;Dbxref=GeneID:132344589,GenBank:XM_059884255.1;gbkey=mRNA;gene=LOC132344589;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01594;gene_id=Cattle_Y_G00889;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884255.1-5
haplotype2-0000357	CAT	exon	48699561	48699672	.	-	.	ID=Cattle_Y_E02764;Parent=Cattle_Y_T01594;Dbxref=GeneID:132344589,GenBank:XM_059884255.1;gbkey=mRNA;gene=LOC132344589;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01594;gene_id=Cattle_Y_G00889;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884255.1-4
haplotype2-0000357	CAT	exon	48699856	48699933	.	-	.	ID=Cattle_Y_E02765;Parent=Cattle_Y_T01594;Dbxref=GeneID:132344589,GenBank:XM_059884255.1;gbkey=mRNA;gene=LOC132344589;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01594;gene_id=Cattle_Y_G00889;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884255.1-3
haplotype2-0000357	CAT	exon	48700731	48701146	.	-	.	ID=Cattle_Y_E02766;Parent=Cattle_Y_T01594;Dbxref=GeneID:132344589,GenBank:XM_059884255.1;gbkey=mRNA;gene=LOC132344589;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01594;gene_id=Cattle_Y_G00889;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884255.1-2
haplotype2-0000357	CAT	exon	48701243	48701258	.	-	.	ID=Cattle_Y_E02767;Parent=Cattle_Y_T01594;Dbxref=GeneID:132344589,GenBank:XM_059884255.1;gbkey=mRNA;gene=LOC132344589;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9449928;transcript_id=Cattle_Y_T01594;gene_id=Cattle_Y_G00889;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884255.1-1
haplotype2-0000357	CAT	CDS	48699126	48699203	.	-	0	ID=Cattle_Y_C02372;Parent=Cattle_Y_T01594;Dbxref=GeneID:132344589,GenBank:XP_059740238.1;Name=XP_059740238.1;gbkey=CDS;gene=LOC132344589;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740238.1;gene_id=Cattle_Y_G00889;transcript_id=Cattle_Y_T01594;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48699320	48699465	.	-	2	ID=Cattle_Y_C02373;Parent=Cattle_Y_T01594;Dbxref=GeneID:132344589,GenBank:XP_059740238.1;Name=XP_059740238.1;gbkey=CDS;gene=LOC132344589;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740238.1;gene_id=Cattle_Y_G00889;transcript_id=Cattle_Y_T01594;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48699561	48699672	.	-	0	ID=Cattle_Y_C02374;Parent=Cattle_Y_T01594;Dbxref=GeneID:132344589,GenBank:XP_059740238.1;Name=XP_059740238.1;gbkey=CDS;gene=LOC132344589;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740238.1;gene_id=Cattle_Y_G00889;transcript_id=Cattle_Y_T01594;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48699856	48699933	.	-	0	ID=Cattle_Y_C02375;Parent=Cattle_Y_T01594;Dbxref=GeneID:132344589,GenBank:XP_059740238.1;Name=XP_059740238.1;gbkey=CDS;gene=LOC132344589;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740238.1;gene_id=Cattle_Y_G00889;transcript_id=Cattle_Y_T01594;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48700731	48701146	.	-	2	ID=Cattle_Y_C02376;Parent=Cattle_Y_T01594;Dbxref=GeneID:132344589,GenBank:XP_059740238.1;Name=XP_059740238.1;gbkey=CDS;gene=LOC132344589;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740238.1;gene_id=Cattle_Y_G00889;transcript_id=Cattle_Y_T01594;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48701243	48701258	.	-	0	ID=Cattle_Y_C02377;Parent=Cattle_Y_T01594;Dbxref=GeneID:132344589,GenBank:XP_059740238.1;Name=XP_059740238.1;gbkey=CDS;gene=LOC132344589;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740238.1;start_range=.,9449928;gene_id=Cattle_Y_G00889;transcript_id=Cattle_Y_T01594;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48706659	48708791	.	-	.	ID=Cattle_Y_G00890;Dbxref=GeneID:132344593;Name=LOC132344593;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344593;gene_biotype=protein_coding;partial=true;start_range=.,9516104;gene_id=Cattle_Y_G00890;source_id=gene-LOC132344593
haplotype2-0000357	CAT	mRNA	48706659	48708791	.	-	.	ID=Cattle_Y_T01595;Parent=Cattle_Y_G00890;Dbxref=GeneID:132344593,GenBank:XM_059884259.1;Name=XM_059884259.1;gbkey=mRNA;gene=LOC132344593;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9516104;transcript_id=Cattle_Y_T01595;gene_id=Cattle_Y_G00890;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884259.1
haplotype2-0000357	CAT	exon	48706659	48706736	.	-	.	ID=Cattle_Y_E02768;Parent=Cattle_Y_T01595;Dbxref=GeneID:132344593,GenBank:XM_059884259.1;gbkey=mRNA;gene=LOC132344593;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01595;gene_id=Cattle_Y_G00890;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884259.1-6
haplotype2-0000357	CAT	exon	48706853	48706998	.	-	.	ID=Cattle_Y_E02769;Parent=Cattle_Y_T01595;Dbxref=GeneID:132344593,GenBank:XM_059884259.1;gbkey=mRNA;gene=LOC132344593;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01595;gene_id=Cattle_Y_G00890;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884259.1-5
haplotype2-0000357	CAT	exon	48707094	48707205	.	-	.	ID=Cattle_Y_E02770;Parent=Cattle_Y_T01595;Dbxref=GeneID:132344593,GenBank:XM_059884259.1;gbkey=mRNA;gene=LOC132344593;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01595;gene_id=Cattle_Y_G00890;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884259.1-4
haplotype2-0000357	CAT	exon	48707389	48707466	.	-	.	ID=Cattle_Y_E02771;Parent=Cattle_Y_T01595;Dbxref=GeneID:132344593,GenBank:XM_059884259.1;gbkey=mRNA;gene=LOC132344593;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01595;gene_id=Cattle_Y_G00890;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884259.1-3
haplotype2-0000357	CAT	exon	48708264	48708679	.	-	.	ID=Cattle_Y_E02772;Parent=Cattle_Y_T01595;Dbxref=GeneID:132344593,GenBank:XM_059884259.1;gbkey=mRNA;gene=LOC132344593;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01595;gene_id=Cattle_Y_G00890;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884259.1-2
haplotype2-0000357	CAT	exon	48708776	48708791	.	-	.	ID=Cattle_Y_E02773;Parent=Cattle_Y_T01595;Dbxref=GeneID:132344593,GenBank:XM_059884259.1;gbkey=mRNA;gene=LOC132344593;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9516104;transcript_id=Cattle_Y_T01595;gene_id=Cattle_Y_G00890;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884259.1-1
haplotype2-0000357	CAT	CDS	48706659	48706736	.	-	0	ID=Cattle_Y_C02378;Parent=Cattle_Y_T01595;Dbxref=GeneID:132344593,GenBank:XP_059740242.1;Name=XP_059740242.1;gbkey=CDS;gene=LOC132344593;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740242.1;gene_id=Cattle_Y_G00890;transcript_id=Cattle_Y_T01595;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48706853	48706998	.	-	2	ID=Cattle_Y_C02379;Parent=Cattle_Y_T01595;Dbxref=GeneID:132344593,GenBank:XP_059740242.1;Name=XP_059740242.1;gbkey=CDS;gene=LOC132344593;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740242.1;gene_id=Cattle_Y_G00890;transcript_id=Cattle_Y_T01595;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48707094	48707205	.	-	0	ID=Cattle_Y_C02380;Parent=Cattle_Y_T01595;Dbxref=GeneID:132344593,GenBank:XP_059740242.1;Name=XP_059740242.1;gbkey=CDS;gene=LOC132344593;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740242.1;gene_id=Cattle_Y_G00890;transcript_id=Cattle_Y_T01595;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48707389	48707466	.	-	0	ID=Cattle_Y_C02381;Parent=Cattle_Y_T01595;Dbxref=GeneID:132344593,GenBank:XP_059740242.1;Name=XP_059740242.1;gbkey=CDS;gene=LOC132344593;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740242.1;gene_id=Cattle_Y_G00890;transcript_id=Cattle_Y_T01595;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48708264	48708679	.	-	2	ID=Cattle_Y_C02382;Parent=Cattle_Y_T01595;Dbxref=GeneID:132344593,GenBank:XP_059740242.1;Name=XP_059740242.1;gbkey=CDS;gene=LOC132344593;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740242.1;gene_id=Cattle_Y_G00890;transcript_id=Cattle_Y_T01595;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48708776	48708791	.	-	0	ID=Cattle_Y_C02383;Parent=Cattle_Y_T01595;Dbxref=GeneID:132344593,GenBank:XP_059740242.1;Name=XP_059740242.1;gbkey=CDS;gene=LOC132344593;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740242.1;start_range=.,9516104;gene_id=Cattle_Y_G00890;transcript_id=Cattle_Y_T01595;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48714195	48716435	.	-	.	ID=Cattle_Y_G00891;Dbxref=GeneID:132344610;Name=LOC132344610;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344610;gene_biotype=protein_coding;gene_id=Cattle_Y_G00891;source_id=gene-LOC132344610
haplotype2-0000357	CAT	mRNA	48714195	48716435	.	-	.	ID=Cattle_Y_T01596;Parent=Cattle_Y_G00891;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;Name=XM_059884276.1;gbkey=mRNA;gene=LOC132344610;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01596;gene_id=Cattle_Y_G00891;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884276.1
haplotype2-0000357	CAT	exon	48714195	48714272	.	-	.	ID=Cattle_Y_E02774;Parent=Cattle_Y_T01596;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;gbkey=mRNA;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01596;gene_id=Cattle_Y_G00891;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884276.1-6
haplotype2-0000357	CAT	exon	48714389	48714534	.	-	.	ID=Cattle_Y_E02775;Parent=Cattle_Y_T01596;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;gbkey=mRNA;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01596;gene_id=Cattle_Y_G00891;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884276.1-6
haplotype2-0000357	CAT	exon	48714630	48714741	.	-	.	ID=Cattle_Y_E02776;Parent=Cattle_Y_T01596;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;gbkey=mRNA;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01596;gene_id=Cattle_Y_G00891;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884276.1-6
haplotype2-0000357	CAT	exon	48714925	48715002	.	-	.	ID=Cattle_Y_E02777;Parent=Cattle_Y_T01596;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;gbkey=mRNA;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01596;gene_id=Cattle_Y_G00891;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884276.1-6
haplotype2-0000357	CAT	exon	48715800	48716215	.	-	.	ID=Cattle_Y_E02778;Parent=Cattle_Y_T01596;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;gbkey=mRNA;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01596;gene_id=Cattle_Y_G00891;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884276.1-6
haplotype2-0000357	CAT	exon	48716312	48716435	.	-	.	ID=Cattle_Y_E02779;Parent=Cattle_Y_T01596;Dbxref=GeneID:132344610,GenBank:XM_059884276.1;gbkey=mRNA;gene=LOC132344610;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01596;gene_id=Cattle_Y_G00891;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884276.1-1
haplotype2-0000357	CAT	CDS	48714195	48714272	.	-	0	ID=Cattle_Y_C02384;Parent=Cattle_Y_T01596;gene_id=Cattle_Y_G00891;transcript_id=Cattle_Y_T01596;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48714389	48714534	.	-	2	ID=Cattle_Y_C02385;Parent=Cattle_Y_T01596;gene_id=Cattle_Y_G00891;transcript_id=Cattle_Y_T01596;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48714630	48714741	.	-	0	ID=Cattle_Y_C02386;Parent=Cattle_Y_T01596;gene_id=Cattle_Y_G00891;transcript_id=Cattle_Y_T01596;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48714925	48715002	.	-	0	ID=Cattle_Y_C02387;Parent=Cattle_Y_T01596;gene_id=Cattle_Y_G00891;transcript_id=Cattle_Y_T01596;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48715800	48716215	.	-	2	ID=Cattle_Y_C02388;Parent=Cattle_Y_T01596;gene_id=Cattle_Y_G00891;transcript_id=Cattle_Y_T01596;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48716312	48716435	.	-	0	ID=Cattle_Y_C02389;Parent=Cattle_Y_T01596;gene_id=Cattle_Y_G00891;transcript_id=Cattle_Y_T01596;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48721730	48723976	.	-	.	ID=Cattle_Y_G00892;Dbxref=GeneID:132344600;Name=LOC132344600;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344600;gene_biotype=protein_coding;gene_id=Cattle_Y_G00892;source_id=gene-LOC132344600
haplotype2-0000357	CAT	mRNA	48721730	48723976	.	-	.	ID=Cattle_Y_T01597;Parent=Cattle_Y_G00892;Dbxref=GeneID:132344600,GenBank:XM_059884266.1;Name=XM_059884266.1;gbkey=mRNA;gene=LOC132344600;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01597;gene_id=Cattle_Y_G00892;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884266.1
haplotype2-0000357	CAT	exon	48721730	48721807	.	-	.	ID=Cattle_Y_E02780;Parent=Cattle_Y_T01597;Dbxref=GeneID:132344600,GenBank:XM_059884266.1;gbkey=mRNA;gene=LOC132344600;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01597;gene_id=Cattle_Y_G00892;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884266.1-6
haplotype2-0000357	CAT	exon	48721924	48722069	.	-	.	ID=Cattle_Y_E02781;Parent=Cattle_Y_T01597;Dbxref=GeneID:132344600,GenBank:XM_059884266.1;gbkey=mRNA;gene=LOC132344600;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01597;gene_id=Cattle_Y_G00892;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884266.1-5
haplotype2-0000357	CAT	exon	48722165	48722276	.	-	.	ID=Cattle_Y_E02782;Parent=Cattle_Y_T01597;Dbxref=GeneID:132344600,GenBank:XM_059884266.1;gbkey=mRNA;gene=LOC132344600;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01597;gene_id=Cattle_Y_G00892;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884266.1-4
haplotype2-0000357	CAT	exon	48722460	48722537	.	-	.	ID=Cattle_Y_E02783;Parent=Cattle_Y_T01597;Dbxref=GeneID:132344600,GenBank:XM_059884266.1;gbkey=mRNA;gene=LOC132344600;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01597;gene_id=Cattle_Y_G00892;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884266.1-3
haplotype2-0000357	CAT	exon	48723341	48723756	.	-	.	ID=Cattle_Y_E02784;Parent=Cattle_Y_T01597;Dbxref=GeneID:132344600,GenBank:XM_059884266.1;gbkey=mRNA;gene=LOC132344600;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01597;gene_id=Cattle_Y_G00892;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884266.1-2
haplotype2-0000357	CAT	exon	48723853	48723976	.	-	.	ID=Cattle_Y_E02785;Parent=Cattle_Y_T01597;Dbxref=GeneID:132344600,GenBank:XM_059884266.1;gbkey=mRNA;gene=LOC132344600;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01597;gene_id=Cattle_Y_G00892;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884266.1-1
haplotype2-0000357	CAT	CDS	48721730	48721807	.	-	0	ID=Cattle_Y_C02390;Parent=Cattle_Y_T01597;Dbxref=GeneID:132344600,GenBank:XP_059740249.1;Name=XP_059740249.1;gbkey=CDS;gene=LOC132344600;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740249.1;gene_id=Cattle_Y_G00892;transcript_id=Cattle_Y_T01597;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48721924	48722069	.	-	2	ID=Cattle_Y_C02391;Parent=Cattle_Y_T01597;Dbxref=GeneID:132344600,GenBank:XP_059740249.1;Name=XP_059740249.1;gbkey=CDS;gene=LOC132344600;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740249.1;gene_id=Cattle_Y_G00892;transcript_id=Cattle_Y_T01597;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48722165	48722276	.	-	0	ID=Cattle_Y_C02392;Parent=Cattle_Y_T01597;Dbxref=GeneID:132344600,GenBank:XP_059740249.1;Name=XP_059740249.1;gbkey=CDS;gene=LOC132344600;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740249.1;gene_id=Cattle_Y_G00892;transcript_id=Cattle_Y_T01597;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48722460	48722537	.	-	0	ID=Cattle_Y_C02393;Parent=Cattle_Y_T01597;Dbxref=GeneID:132344600,GenBank:XP_059740249.1;Name=XP_059740249.1;gbkey=CDS;gene=LOC132344600;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740249.1;gene_id=Cattle_Y_G00892;transcript_id=Cattle_Y_T01597;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48723341	48723756	.	-	2	ID=Cattle_Y_C02394;Parent=Cattle_Y_T01597;Dbxref=GeneID:132344600,GenBank:XP_059740249.1;Name=XP_059740249.1;gbkey=CDS;gene=LOC132344600;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740249.1;gene_id=Cattle_Y_G00892;transcript_id=Cattle_Y_T01597;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48723853	48723976	.	-	0	ID=Cattle_Y_C02395;Parent=Cattle_Y_T01597;Dbxref=GeneID:132344600,GenBank:XP_059740249.1;Name=XP_059740249.1;gbkey=CDS;gene=LOC132344600;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740249.1;gene_id=Cattle_Y_G00892;transcript_id=Cattle_Y_T01597;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48729266	48731506	.	-	.	ID=Cattle_Y_G00893;Dbxref=GeneID:132344614;Name=LOC132344614;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344614;gene_biotype=protein_coding;gene_id=Cattle_Y_G00893;source_id=gene-LOC132344614
haplotype2-0000357	CAT	mRNA	48729266	48731506	.	-	.	ID=Cattle_Y_T01598;Parent=Cattle_Y_G00893;Dbxref=GeneID:132344614,GenBank:XM_059884280.1;Name=XM_059884280.1;gbkey=mRNA;gene=LOC132344614;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01598;gene_id=Cattle_Y_G00893;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884280.1
haplotype2-0000357	CAT	exon	48729266	48729343	.	-	.	ID=Cattle_Y_E02786;Parent=Cattle_Y_T01598;Dbxref=GeneID:132344614,GenBank:XM_059884280.1;gbkey=mRNA;gene=LOC132344614;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01598;gene_id=Cattle_Y_G00893;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884280.1-6
haplotype2-0000357	CAT	exon	48729460	48729605	.	-	.	ID=Cattle_Y_E02787;Parent=Cattle_Y_T01598;Dbxref=GeneID:132344614,GenBank:XM_059884280.1;gbkey=mRNA;gene=LOC132344614;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01598;gene_id=Cattle_Y_G00893;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884280.1-5
haplotype2-0000357	CAT	exon	48729701	48729812	.	-	.	ID=Cattle_Y_E02788;Parent=Cattle_Y_T01598;Dbxref=GeneID:132344614,GenBank:XM_059884280.1;gbkey=mRNA;gene=LOC132344614;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01598;gene_id=Cattle_Y_G00893;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884280.1-4
haplotype2-0000357	CAT	exon	48729996	48730073	.	-	.	ID=Cattle_Y_E02789;Parent=Cattle_Y_T01598;Dbxref=GeneID:132344614,GenBank:XM_059884280.1;gbkey=mRNA;gene=LOC132344614;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01598;gene_id=Cattle_Y_G00893;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884280.1-3
haplotype2-0000357	CAT	exon	48730871	48731286	.	-	.	ID=Cattle_Y_E02790;Parent=Cattle_Y_T01598;Dbxref=GeneID:132344614,GenBank:XM_059884280.1;gbkey=mRNA;gene=LOC132344614;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01598;gene_id=Cattle_Y_G00893;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884280.1-2
haplotype2-0000357	CAT	exon	48731383	48731506	.	-	.	ID=Cattle_Y_E02791;Parent=Cattle_Y_T01598;Dbxref=GeneID:132344614,GenBank:XM_059884280.1;gbkey=mRNA;gene=LOC132344614;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01598;gene_id=Cattle_Y_G00893;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884280.1-1
haplotype2-0000357	CAT	CDS	48729266	48729343	.	-	0	ID=Cattle_Y_C02396;Parent=Cattle_Y_T01598;Dbxref=GeneID:132344614,GenBank:XP_059740263.1;Name=XP_059740263.1;gbkey=CDS;gene=LOC132344614;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740263.1;gene_id=Cattle_Y_G00893;transcript_id=Cattle_Y_T01598;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48729460	48729605	.	-	2	ID=Cattle_Y_C02397;Parent=Cattle_Y_T01598;Dbxref=GeneID:132344614,GenBank:XP_059740263.1;Name=XP_059740263.1;gbkey=CDS;gene=LOC132344614;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740263.1;gene_id=Cattle_Y_G00893;transcript_id=Cattle_Y_T01598;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48729701	48729812	.	-	0	ID=Cattle_Y_C02398;Parent=Cattle_Y_T01598;Dbxref=GeneID:132344614,GenBank:XP_059740263.1;Name=XP_059740263.1;gbkey=CDS;gene=LOC132344614;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740263.1;gene_id=Cattle_Y_G00893;transcript_id=Cattle_Y_T01598;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48729996	48730073	.	-	0	ID=Cattle_Y_C02399;Parent=Cattle_Y_T01598;Dbxref=GeneID:132344614,GenBank:XP_059740263.1;Name=XP_059740263.1;gbkey=CDS;gene=LOC132344614;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740263.1;gene_id=Cattle_Y_G00893;transcript_id=Cattle_Y_T01598;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48730871	48731286	.	-	2	ID=Cattle_Y_C02400;Parent=Cattle_Y_T01598;Dbxref=GeneID:132344614,GenBank:XP_059740263.1;Name=XP_059740263.1;gbkey=CDS;gene=LOC132344614;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740263.1;gene_id=Cattle_Y_G00893;transcript_id=Cattle_Y_T01598;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48731383	48731506	.	-	0	ID=Cattle_Y_C02401;Parent=Cattle_Y_T01598;Dbxref=GeneID:132344614,GenBank:XP_059740263.1;Name=XP_059740263.1;gbkey=CDS;gene=LOC132344614;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740263.1;gene_id=Cattle_Y_G00893;transcript_id=Cattle_Y_T01598;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48736797	48739049	.	-	.	ID=Cattle_Y_G00894;Dbxref=GeneID:132344598;Name=LOC132344598;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344598;gene_biotype=protein_coding;gene_id=Cattle_Y_G00894;source_id=gene-LOC132344598
haplotype2-0000357	CAT	mRNA	48736797	48739049	.	-	.	ID=Cattle_Y_T01599;Parent=Cattle_Y_G00894;Dbxref=GeneID:132344598,GenBank:XM_059884264.1;Name=XM_059884264.1;gbkey=mRNA;gene=LOC132344598;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01599;gene_id=Cattle_Y_G00894;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884264.1
haplotype2-0000357	CAT	exon	48736797	48736874	.	-	.	ID=Cattle_Y_E02792;Parent=Cattle_Y_T01599;Dbxref=GeneID:132344598,GenBank:XM_059884264.1;gbkey=mRNA;gene=LOC132344598;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01599;gene_id=Cattle_Y_G00894;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884264.1-6
haplotype2-0000357	CAT	exon	48736991	48737136	.	-	.	ID=Cattle_Y_E02793;Parent=Cattle_Y_T01599;Dbxref=GeneID:132344598,GenBank:XM_059884264.1;gbkey=mRNA;gene=LOC132344598;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01599;gene_id=Cattle_Y_G00894;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884264.1-5
haplotype2-0000357	CAT	exon	48737232	48737343	.	-	.	ID=Cattle_Y_E02794;Parent=Cattle_Y_T01599;Dbxref=GeneID:132344598,GenBank:XM_059884264.1;gbkey=mRNA;gene=LOC132344598;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01599;gene_id=Cattle_Y_G00894;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884264.1-4
haplotype2-0000357	CAT	exon	48737527	48737604	.	-	.	ID=Cattle_Y_E02795;Parent=Cattle_Y_T01599;Dbxref=GeneID:132344598,GenBank:XM_059884264.1;gbkey=mRNA;gene=LOC132344598;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01599;gene_id=Cattle_Y_G00894;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884264.1-3
haplotype2-0000357	CAT	exon	48738414	48738829	.	-	.	ID=Cattle_Y_E02796;Parent=Cattle_Y_T01599;Dbxref=GeneID:132344598,GenBank:XM_059884264.1;gbkey=mRNA;gene=LOC132344598;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01599;gene_id=Cattle_Y_G00894;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884264.1-2
haplotype2-0000357	CAT	exon	48738926	48739049	.	-	.	ID=Cattle_Y_E02797;Parent=Cattle_Y_T01599;Dbxref=GeneID:132344598,GenBank:XM_059884264.1;gbkey=mRNA;gene=LOC132344598;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01599;gene_id=Cattle_Y_G00894;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884264.1-1
haplotype2-0000357	CAT	CDS	48736797	48736874	.	-	0	ID=Cattle_Y_C02402;Parent=Cattle_Y_T01599;Dbxref=GeneID:132344598,GenBank:XP_059740247.1;Name=XP_059740247.1;gbkey=CDS;gene=LOC132344598;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740247.1;gene_id=Cattle_Y_G00894;transcript_id=Cattle_Y_T01599;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48736991	48737136	.	-	2	ID=Cattle_Y_C02403;Parent=Cattle_Y_T01599;Dbxref=GeneID:132344598,GenBank:XP_059740247.1;Name=XP_059740247.1;gbkey=CDS;gene=LOC132344598;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740247.1;gene_id=Cattle_Y_G00894;transcript_id=Cattle_Y_T01599;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48737232	48737343	.	-	0	ID=Cattle_Y_C02404;Parent=Cattle_Y_T01599;Dbxref=GeneID:132344598,GenBank:XP_059740247.1;Name=XP_059740247.1;gbkey=CDS;gene=LOC132344598;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740247.1;gene_id=Cattle_Y_G00894;transcript_id=Cattle_Y_T01599;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48737527	48737604	.	-	0	ID=Cattle_Y_C02405;Parent=Cattle_Y_T01599;Dbxref=GeneID:132344598,GenBank:XP_059740247.1;Name=XP_059740247.1;gbkey=CDS;gene=LOC132344598;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740247.1;gene_id=Cattle_Y_G00894;transcript_id=Cattle_Y_T01599;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48738414	48738829	.	-	2	ID=Cattle_Y_C02406;Parent=Cattle_Y_T01599;Dbxref=GeneID:132344598,GenBank:XP_059740247.1;Name=XP_059740247.1;gbkey=CDS;gene=LOC132344598;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740247.1;gene_id=Cattle_Y_G00894;transcript_id=Cattle_Y_T01599;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48738926	48739049	.	-	0	ID=Cattle_Y_C02407;Parent=Cattle_Y_T01599;Dbxref=GeneID:132344598,GenBank:XP_059740247.1;Name=XP_059740247.1;gbkey=CDS;gene=LOC132344598;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740247.1;gene_id=Cattle_Y_G00894;transcript_id=Cattle_Y_T01599;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48744340	48746592	.	-	.	ID=Cattle_Y_G00895;Dbxref=GeneID:132344601;Name=LOC132344601;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344601;gene_biotype=protein_coding;gene_id=Cattle_Y_G00895;source_id=gene-LOC132344601
haplotype2-0000357	CAT	mRNA	48744340	48746592	.	-	.	ID=Cattle_Y_T01600;Parent=Cattle_Y_G00895;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;Name=XM_059884267.1;gbkey=mRNA;gene=LOC132344601;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01600;gene_id=Cattle_Y_G00895;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884267.1
haplotype2-0000357	CAT	exon	48744340	48744417	.	-	.	ID=Cattle_Y_E02798;Parent=Cattle_Y_T01600;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01600;gene_id=Cattle_Y_G00895;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-6
haplotype2-0000357	CAT	exon	48744534	48744679	.	-	.	ID=Cattle_Y_E02799;Parent=Cattle_Y_T01600;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01600;gene_id=Cattle_Y_G00895;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-6
haplotype2-0000357	CAT	exon	48744775	48744886	.	-	.	ID=Cattle_Y_E02800;Parent=Cattle_Y_T01600;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01600;gene_id=Cattle_Y_G00895;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-6
haplotype2-0000357	CAT	exon	48745070	48745147	.	-	.	ID=Cattle_Y_E02801;Parent=Cattle_Y_T01600;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01600;gene_id=Cattle_Y_G00895;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-6
haplotype2-0000357	CAT	exon	48745957	48746372	.	-	.	ID=Cattle_Y_E02802;Parent=Cattle_Y_T01600;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01600;gene_id=Cattle_Y_G00895;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-6
haplotype2-0000357	CAT	exon	48746469	48746592	.	-	.	ID=Cattle_Y_E02803;Parent=Cattle_Y_T01600;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01600;gene_id=Cattle_Y_G00895;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-1
haplotype2-0000357	CAT	CDS	48744340	48744417	.	-	0	ID=Cattle_Y_C02408;Parent=Cattle_Y_T01600;gene_id=Cattle_Y_G00895;transcript_id=Cattle_Y_T01600;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48744534	48744679	.	-	2	ID=Cattle_Y_C02409;Parent=Cattle_Y_T01600;gene_id=Cattle_Y_G00895;transcript_id=Cattle_Y_T01600;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48744775	48744886	.	-	0	ID=Cattle_Y_C02410;Parent=Cattle_Y_T01600;gene_id=Cattle_Y_G00895;transcript_id=Cattle_Y_T01600;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48745070	48745147	.	-	0	ID=Cattle_Y_C02411;Parent=Cattle_Y_T01600;gene_id=Cattle_Y_G00895;transcript_id=Cattle_Y_T01600;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48745957	48746372	.	-	2	ID=Cattle_Y_C02412;Parent=Cattle_Y_T01600;gene_id=Cattle_Y_G00895;transcript_id=Cattle_Y_T01600;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48746469	48746592	.	-	0	ID=Cattle_Y_C02413;Parent=Cattle_Y_T01600;gene_id=Cattle_Y_G00895;transcript_id=Cattle_Y_T01600;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48751884	48754124	.	-	.	ID=Cattle_Y_G00896;Dbxref=GeneID:132344586;Name=LOC132344586;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344586;gene_biotype=protein_coding;gene_id=Cattle_Y_G00896;source_id=gene-LOC132344586
haplotype2-0000357	CAT	mRNA	48751884	48754124	.	-	.	ID=Cattle_Y_T01601;Parent=Cattle_Y_G00896;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;Name=XM_059884252.1;gbkey=mRNA;gene=LOC132344586;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01601;gene_id=Cattle_Y_G00896;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884252.1
haplotype2-0000357	CAT	exon	48751884	48751961	.	-	.	ID=Cattle_Y_E02804;Parent=Cattle_Y_T01601;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;gbkey=mRNA;gene=LOC132344586;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01601;gene_id=Cattle_Y_G00896;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884252.1-6
haplotype2-0000357	CAT	exon	48752078	48752223	.	-	.	ID=Cattle_Y_E02805;Parent=Cattle_Y_T01601;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;gbkey=mRNA;gene=LOC132344586;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01601;gene_id=Cattle_Y_G00896;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884252.1-6
haplotype2-0000357	CAT	exon	48752319	48752430	.	-	.	ID=Cattle_Y_E02806;Parent=Cattle_Y_T01601;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;gbkey=mRNA;gene=LOC132344586;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01601;gene_id=Cattle_Y_G00896;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884252.1-6
haplotype2-0000357	CAT	exon	48752614	48752691	.	-	.	ID=Cattle_Y_E02807;Parent=Cattle_Y_T01601;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;gbkey=mRNA;gene=LOC132344586;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01601;gene_id=Cattle_Y_G00896;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884252.1-6
haplotype2-0000357	CAT	exon	48753489	48753904	.	-	.	ID=Cattle_Y_E02808;Parent=Cattle_Y_T01601;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;gbkey=mRNA;gene=LOC132344586;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01601;gene_id=Cattle_Y_G00896;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884252.1-6
haplotype2-0000357	CAT	exon	48754001	48754124	.	-	.	ID=Cattle_Y_E02809;Parent=Cattle_Y_T01601;Dbxref=GeneID:132344586,GenBank:XM_059884252.1;gbkey=mRNA;gene=LOC132344586;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01601;gene_id=Cattle_Y_G00896;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884252.1-1
haplotype2-0000357	CAT	CDS	48751884	48751961	.	-	0	ID=Cattle_Y_C02414;Parent=Cattle_Y_T01601;gene_id=Cattle_Y_G00896;transcript_id=Cattle_Y_T01601;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48752078	48752223	.	-	2	ID=Cattle_Y_C02415;Parent=Cattle_Y_T01601;gene_id=Cattle_Y_G00896;transcript_id=Cattle_Y_T01601;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48752319	48752430	.	-	0	ID=Cattle_Y_C02416;Parent=Cattle_Y_T01601;gene_id=Cattle_Y_G00896;transcript_id=Cattle_Y_T01601;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48752614	48752691	.	-	0	ID=Cattle_Y_C02417;Parent=Cattle_Y_T01601;gene_id=Cattle_Y_G00896;transcript_id=Cattle_Y_T01601;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48753489	48753904	.	-	2	ID=Cattle_Y_C02418;Parent=Cattle_Y_T01601;gene_id=Cattle_Y_G00896;transcript_id=Cattle_Y_T01601;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48754001	48754124	.	-	0	ID=Cattle_Y_C02419;Parent=Cattle_Y_T01601;gene_id=Cattle_Y_G00896;transcript_id=Cattle_Y_T01601;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48759415	48761667	.	-	.	ID=Cattle_Y_G00897;Dbxref=GeneID:132344601;Name=LOC132344601;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344601;gene_biotype=protein_coding;gene_id=Cattle_Y_G00897;source_id=gene-LOC132344601
haplotype2-0000357	CAT	mRNA	48759415	48761667	.	-	.	ID=Cattle_Y_T01602;Parent=Cattle_Y_G00897;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;Name=XM_059884267.1;gbkey=mRNA;gene=LOC132344601;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01602;gene_id=Cattle_Y_G00897;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884267.1
haplotype2-0000357	CAT	exon	48759415	48759492	.	-	.	ID=Cattle_Y_E02810;Parent=Cattle_Y_T01602;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01602;gene_id=Cattle_Y_G00897;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-6
haplotype2-0000357	CAT	exon	48759609	48759754	.	-	.	ID=Cattle_Y_E02811;Parent=Cattle_Y_T01602;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01602;gene_id=Cattle_Y_G00897;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-5
haplotype2-0000357	CAT	exon	48759850	48759961	.	-	.	ID=Cattle_Y_E02812;Parent=Cattle_Y_T01602;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01602;gene_id=Cattle_Y_G00897;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-4
haplotype2-0000357	CAT	exon	48760145	48760222	.	-	.	ID=Cattle_Y_E02813;Parent=Cattle_Y_T01602;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01602;gene_id=Cattle_Y_G00897;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-3
haplotype2-0000357	CAT	exon	48761032	48761447	.	-	.	ID=Cattle_Y_E02814;Parent=Cattle_Y_T01602;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01602;gene_id=Cattle_Y_G00897;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-2
haplotype2-0000357	CAT	exon	48761544	48761667	.	-	.	ID=Cattle_Y_E02815;Parent=Cattle_Y_T01602;Dbxref=GeneID:132344601,GenBank:XM_059884267.1;gbkey=mRNA;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01602;gene_id=Cattle_Y_G00897;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884267.1-1
haplotype2-0000357	CAT	CDS	48759415	48759492	.	-	0	ID=Cattle_Y_C02420;Parent=Cattle_Y_T01602;Dbxref=GeneID:132344601,GenBank:XP_059740250.1;Name=XP_059740250.1;gbkey=CDS;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740250.1_1;gene_id=Cattle_Y_G00897;transcript_id=Cattle_Y_T01602;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48759609	48759754	.	-	2	ID=Cattle_Y_C02421;Parent=Cattle_Y_T01602;Dbxref=GeneID:132344601,GenBank:XP_059740250.1;Name=XP_059740250.1;gbkey=CDS;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740250.1_1;gene_id=Cattle_Y_G00897;transcript_id=Cattle_Y_T01602;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48759850	48759961	.	-	0	ID=Cattle_Y_C02422;Parent=Cattle_Y_T01602;Dbxref=GeneID:132344601,GenBank:XP_059740250.1;Name=XP_059740250.1;gbkey=CDS;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740250.1_1;gene_id=Cattle_Y_G00897;transcript_id=Cattle_Y_T01602;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48760145	48760222	.	-	0	ID=Cattle_Y_C02423;Parent=Cattle_Y_T01602;Dbxref=GeneID:132344601,GenBank:XP_059740250.1;Name=XP_059740250.1;gbkey=CDS;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740250.1_1;gene_id=Cattle_Y_G00897;transcript_id=Cattle_Y_T01602;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48761032	48761447	.	-	2	ID=Cattle_Y_C02424;Parent=Cattle_Y_T01602;Dbxref=GeneID:132344601,GenBank:XP_059740250.1;Name=XP_059740250.1;gbkey=CDS;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740250.1_1;gene_id=Cattle_Y_G00897;transcript_id=Cattle_Y_T01602;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48761544	48761667	.	-	0	ID=Cattle_Y_C02425;Parent=Cattle_Y_T01602;Dbxref=GeneID:132344601,GenBank:XP_059740250.1;Name=XP_059740250.1;gbkey=CDS;gene=LOC132344601;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740250.1_1;gene_id=Cattle_Y_G00897;transcript_id=Cattle_Y_T01602;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48766956	48769202	.	-	.	ID=Cattle_Y_G00898;Dbxref=GeneID:132344602;Name=LOC132344602;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344602;gene_biotype=protein_coding;gene_id=Cattle_Y_G00898;source_id=gene-LOC132344602
haplotype2-0000357	CAT	mRNA	48766956	48769202	.	-	.	ID=Cattle_Y_T01603;Parent=Cattle_Y_G00898;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;Name=XM_059884268.1;gbkey=mRNA;gene=LOC132344602;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01603;gene_id=Cattle_Y_G00898;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884268.1
haplotype2-0000357	CAT	exon	48766956	48767033	.	-	.	ID=Cattle_Y_E02816;Parent=Cattle_Y_T01603;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01603;gene_id=Cattle_Y_G00898;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-6
haplotype2-0000357	CAT	exon	48767150	48767295	.	-	.	ID=Cattle_Y_E02817;Parent=Cattle_Y_T01603;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01603;gene_id=Cattle_Y_G00898;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-5
haplotype2-0000357	CAT	exon	48767391	48767502	.	-	.	ID=Cattle_Y_E02818;Parent=Cattle_Y_T01603;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01603;gene_id=Cattle_Y_G00898;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-4
haplotype2-0000357	CAT	exon	48767686	48767763	.	-	.	ID=Cattle_Y_E02819;Parent=Cattle_Y_T01603;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01603;gene_id=Cattle_Y_G00898;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-3
haplotype2-0000357	CAT	exon	48768567	48768982	.	-	.	ID=Cattle_Y_E02820;Parent=Cattle_Y_T01603;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01603;gene_id=Cattle_Y_G00898;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-2
haplotype2-0000357	CAT	exon	48769079	48769202	.	-	.	ID=Cattle_Y_E02821;Parent=Cattle_Y_T01603;Dbxref=GeneID:132344602,GenBank:XM_059884268.1;gbkey=mRNA;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01603;gene_id=Cattle_Y_G00898;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884268.1-1
haplotype2-0000357	CAT	CDS	48766956	48767033	.	-	0	ID=Cattle_Y_C02426;Parent=Cattle_Y_T01603;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1;gene_id=Cattle_Y_G00898;transcript_id=Cattle_Y_T01603;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48767150	48767295	.	-	2	ID=Cattle_Y_C02427;Parent=Cattle_Y_T01603;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1;gene_id=Cattle_Y_G00898;transcript_id=Cattle_Y_T01603;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48767391	48767502	.	-	0	ID=Cattle_Y_C02428;Parent=Cattle_Y_T01603;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1;gene_id=Cattle_Y_G00898;transcript_id=Cattle_Y_T01603;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48767686	48767763	.	-	0	ID=Cattle_Y_C02429;Parent=Cattle_Y_T01603;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1;gene_id=Cattle_Y_G00898;transcript_id=Cattle_Y_T01603;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48768567	48768982	.	-	2	ID=Cattle_Y_C02430;Parent=Cattle_Y_T01603;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1;gene_id=Cattle_Y_G00898;transcript_id=Cattle_Y_T01603;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48769079	48769202	.	-	0	ID=Cattle_Y_C02431;Parent=Cattle_Y_T01603;Dbxref=GeneID:132344602,GenBank:XP_059740251.1;Name=XP_059740251.1;gbkey=CDS;gene=LOC132344602;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740251.1;gene_id=Cattle_Y_G00898;transcript_id=Cattle_Y_T01603;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48774496	48776742	.	-	.	ID=Cattle_Y_G00899;Dbxref=GeneID:132344597;Name=LOC132344597;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344597;gene_biotype=protein_coding;gene_id=Cattle_Y_G00899;source_id=gene-LOC132344597
haplotype2-0000357	CAT	mRNA	48774496	48776742	.	-	.	ID=Cattle_Y_T01604;Parent=Cattle_Y_G00899;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;Name=XM_059884263.1;gbkey=mRNA;gene=LOC132344597;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01604;gene_id=Cattle_Y_G00899;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884263.1
haplotype2-0000357	CAT	exon	48774496	48774573	.	-	.	ID=Cattle_Y_E02822;Parent=Cattle_Y_T01604;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01604;gene_id=Cattle_Y_G00899;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-6
haplotype2-0000357	CAT	exon	48774690	48774835	.	-	.	ID=Cattle_Y_E02823;Parent=Cattle_Y_T01604;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01604;gene_id=Cattle_Y_G00899;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-5
haplotype2-0000357	CAT	exon	48774931	48775042	.	-	.	ID=Cattle_Y_E02824;Parent=Cattle_Y_T01604;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01604;gene_id=Cattle_Y_G00899;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-4
haplotype2-0000357	CAT	exon	48775226	48775303	.	-	.	ID=Cattle_Y_E02825;Parent=Cattle_Y_T01604;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01604;gene_id=Cattle_Y_G00899;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-3
haplotype2-0000357	CAT	exon	48776107	48776522	.	-	.	ID=Cattle_Y_E02826;Parent=Cattle_Y_T01604;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01604;gene_id=Cattle_Y_G00899;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-2
haplotype2-0000357	CAT	exon	48776619	48776742	.	-	.	ID=Cattle_Y_E02827;Parent=Cattle_Y_T01604;Dbxref=GeneID:132344597,GenBank:XM_059884263.1;gbkey=mRNA;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01604;gene_id=Cattle_Y_G00899;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884263.1-1
haplotype2-0000357	CAT	CDS	48774496	48774573	.	-	0	ID=Cattle_Y_C02432;Parent=Cattle_Y_T01604;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1;gene_id=Cattle_Y_G00899;transcript_id=Cattle_Y_T01604;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48774690	48774835	.	-	2	ID=Cattle_Y_C02433;Parent=Cattle_Y_T01604;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1;gene_id=Cattle_Y_G00899;transcript_id=Cattle_Y_T01604;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48774931	48775042	.	-	0	ID=Cattle_Y_C02434;Parent=Cattle_Y_T01604;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1;gene_id=Cattle_Y_G00899;transcript_id=Cattle_Y_T01604;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48775226	48775303	.	-	0	ID=Cattle_Y_C02435;Parent=Cattle_Y_T01604;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1;gene_id=Cattle_Y_G00899;transcript_id=Cattle_Y_T01604;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48776107	48776522	.	-	2	ID=Cattle_Y_C02436;Parent=Cattle_Y_T01604;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1;gene_id=Cattle_Y_G00899;transcript_id=Cattle_Y_T01604;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48776619	48776742	.	-	0	ID=Cattle_Y_C02437;Parent=Cattle_Y_T01604;Dbxref=GeneID:132344597,GenBank:XP_059740246.1;Name=XP_059740246.1;gbkey=CDS;gene=LOC132344597;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740246.1;gene_id=Cattle_Y_G00899;transcript_id=Cattle_Y_T01604;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48781892	48784114	.	-	.	ID=Cattle_Y_G00900;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00900;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	48781892	48784114	.	-	.	ID=Cattle_Y_T01605;Parent=Cattle_Y_G00900;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01605;gene_id=Cattle_Y_G00900;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	48781892	48781969	.	-	.	ID=Cattle_Y_E02828;Parent=Cattle_Y_T01605;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01605;gene_id=Cattle_Y_G00900;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	48782086	48782231	.	-	.	ID=Cattle_Y_E02829;Parent=Cattle_Y_T01605;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01605;gene_id=Cattle_Y_G00900;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	48782327	48782438	.	-	.	ID=Cattle_Y_E02830;Parent=Cattle_Y_T01605;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01605;gene_id=Cattle_Y_G00900;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	48782622	48782699	.	-	.	ID=Cattle_Y_E02831;Parent=Cattle_Y_T01605;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01605;gene_id=Cattle_Y_G00900;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	48783479	48783894	.	-	.	ID=Cattle_Y_E02832;Parent=Cattle_Y_T01605;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01605;gene_id=Cattle_Y_G00900;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	48783991	48784114	.	-	.	ID=Cattle_Y_E02833;Parent=Cattle_Y_T01605;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01605;gene_id=Cattle_Y_G00900;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	48781892	48781969	.	-	0	ID=Cattle_Y_C02438;Parent=Cattle_Y_T01605;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_19;gene_id=Cattle_Y_G00900;transcript_id=Cattle_Y_T01605;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48782086	48782231	.	-	2	ID=Cattle_Y_C02439;Parent=Cattle_Y_T01605;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_19;gene_id=Cattle_Y_G00900;transcript_id=Cattle_Y_T01605;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48782327	48782438	.	-	0	ID=Cattle_Y_C02440;Parent=Cattle_Y_T01605;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_19;gene_id=Cattle_Y_G00900;transcript_id=Cattle_Y_T01605;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48782622	48782699	.	-	0	ID=Cattle_Y_C02441;Parent=Cattle_Y_T01605;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_19;gene_id=Cattle_Y_G00900;transcript_id=Cattle_Y_T01605;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48783479	48783894	.	-	2	ID=Cattle_Y_C02442;Parent=Cattle_Y_T01605;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_19;gene_id=Cattle_Y_G00900;transcript_id=Cattle_Y_T01605;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48783991	48784114	.	-	0	ID=Cattle_Y_C02443;Parent=Cattle_Y_T01605;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_19;gene_id=Cattle_Y_G00900;transcript_id=Cattle_Y_T01605;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48789271	48791385	.	-	.	ID=Cattle_Y_G00901;Dbxref=GeneID:132344579;Name=LOC132344579;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344579;gene_biotype=protein_coding;partial=true;start_range=.,9265914;gene_id=Cattle_Y_G00901;source_id=gene-LOC132344579
haplotype2-0000357	CAT	mRNA	48789271	48791385	.	-	.	ID=Cattle_Y_T01606;Parent=Cattle_Y_G00901;Dbxref=GeneID:132344579,GenBank:XM_059884244.1;Name=XM_059884244.1;gbkey=mRNA;gene=LOC132344579;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9265914;transcript_id=Cattle_Y_T01606;gene_id=Cattle_Y_G00901;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884244.1
haplotype2-0000357	CAT	exon	48789271	48789348	.	-	.	ID=Cattle_Y_E02834;Parent=Cattle_Y_T01606;Dbxref=GeneID:132344579,GenBank:XM_059884244.1;gbkey=mRNA;gene=LOC132344579;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01606;gene_id=Cattle_Y_G00901;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884244.1-6
haplotype2-0000357	CAT	exon	48789465	48789610	.	-	.	ID=Cattle_Y_E02835;Parent=Cattle_Y_T01606;Dbxref=GeneID:132344579,GenBank:XM_059884244.1;gbkey=mRNA;gene=LOC132344579;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01606;gene_id=Cattle_Y_G00901;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884244.1-5
haplotype2-0000357	CAT	exon	48789706	48789817	.	-	.	ID=Cattle_Y_E02836;Parent=Cattle_Y_T01606;Dbxref=GeneID:132344579,GenBank:XM_059884244.1;gbkey=mRNA;gene=LOC132344579;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01606;gene_id=Cattle_Y_G00901;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884244.1-4
haplotype2-0000357	CAT	exon	48790001	48790078	.	-	.	ID=Cattle_Y_E02837;Parent=Cattle_Y_T01606;Dbxref=GeneID:132344579,GenBank:XM_059884244.1;gbkey=mRNA;gene=LOC132344579;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01606;gene_id=Cattle_Y_G00901;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884244.1-3
haplotype2-0000357	CAT	exon	48790858	48791273	.	-	.	ID=Cattle_Y_E02838;Parent=Cattle_Y_T01606;Dbxref=GeneID:132344579,GenBank:XM_059884244.1;gbkey=mRNA;gene=LOC132344579;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01606;gene_id=Cattle_Y_G00901;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884244.1-2
haplotype2-0000357	CAT	exon	48791370	48791385	.	-	.	ID=Cattle_Y_E02839;Parent=Cattle_Y_T01606;Dbxref=GeneID:132344579,GenBank:XM_059884244.1;gbkey=mRNA;gene=LOC132344579;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9265914;transcript_id=Cattle_Y_T01606;gene_id=Cattle_Y_G00901;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884244.1-1
haplotype2-0000357	CAT	CDS	48789271	48789348	.	-	0	ID=Cattle_Y_C02444;Parent=Cattle_Y_T01606;Dbxref=GeneID:132344579,GenBank:XP_059740227.1;Name=XP_059740227.1;gbkey=CDS;gene=LOC132344579;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740227.1;gene_id=Cattle_Y_G00901;transcript_id=Cattle_Y_T01606;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48789465	48789610	.	-	2	ID=Cattle_Y_C02445;Parent=Cattle_Y_T01606;Dbxref=GeneID:132344579,GenBank:XP_059740227.1;Name=XP_059740227.1;gbkey=CDS;gene=LOC132344579;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740227.1;gene_id=Cattle_Y_G00901;transcript_id=Cattle_Y_T01606;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48789706	48789817	.	-	0	ID=Cattle_Y_C02446;Parent=Cattle_Y_T01606;Dbxref=GeneID:132344579,GenBank:XP_059740227.1;Name=XP_059740227.1;gbkey=CDS;gene=LOC132344579;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740227.1;gene_id=Cattle_Y_G00901;transcript_id=Cattle_Y_T01606;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48790001	48790078	.	-	0	ID=Cattle_Y_C02447;Parent=Cattle_Y_T01606;Dbxref=GeneID:132344579,GenBank:XP_059740227.1;Name=XP_059740227.1;gbkey=CDS;gene=LOC132344579;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740227.1;gene_id=Cattle_Y_G00901;transcript_id=Cattle_Y_T01606;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48790858	48791273	.	-	2	ID=Cattle_Y_C02448;Parent=Cattle_Y_T01606;Dbxref=GeneID:132344579,GenBank:XP_059740227.1;Name=XP_059740227.1;gbkey=CDS;gene=LOC132344579;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740227.1;gene_id=Cattle_Y_G00901;transcript_id=Cattle_Y_T01606;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48791370	48791385	.	-	0	ID=Cattle_Y_C02449;Parent=Cattle_Y_T01606;Dbxref=GeneID:132344579,GenBank:XP_059740227.1;Name=XP_059740227.1;gbkey=CDS;gene=LOC132344579;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740227.1;start_range=.,9265914;gene_id=Cattle_Y_G00901;transcript_id=Cattle_Y_T01606;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48796649	48798763	.	-	.	ID=Cattle_Y_G00902;Dbxref=GeneID:132344580;Name=LOC132344580;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344580;gene_biotype=protein_coding;partial=true;start_range=.,9273311;gene_id=Cattle_Y_G00902;source_id=gene-LOC132344580
haplotype2-0000357	CAT	mRNA	48796649	48798763	.	-	.	ID=Cattle_Y_T01607;Parent=Cattle_Y_G00902;Dbxref=GeneID:132344580,GenBank:XM_059884246.1;Name=XM_059884246.1;gbkey=mRNA;gene=LOC132344580;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9273311;transcript_id=Cattle_Y_T01607;gene_id=Cattle_Y_G00902;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884246.1
haplotype2-0000357	CAT	exon	48796649	48796726	.	-	.	ID=Cattle_Y_E02840;Parent=Cattle_Y_T01607;Dbxref=GeneID:132344580,GenBank:XM_059884246.1;gbkey=mRNA;gene=LOC132344580;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01607;gene_id=Cattle_Y_G00902;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884246.1-6
haplotype2-0000357	CAT	exon	48796843	48796988	.	-	.	ID=Cattle_Y_E02841;Parent=Cattle_Y_T01607;Dbxref=GeneID:132344580,GenBank:XM_059884246.1;gbkey=mRNA;gene=LOC132344580;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01607;gene_id=Cattle_Y_G00902;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884246.1-5
haplotype2-0000357	CAT	exon	48797084	48797195	.	-	.	ID=Cattle_Y_E02842;Parent=Cattle_Y_T01607;Dbxref=GeneID:132344580,GenBank:XM_059884246.1;gbkey=mRNA;gene=LOC132344580;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01607;gene_id=Cattle_Y_G00902;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884246.1-4
haplotype2-0000357	CAT	exon	48797379	48797456	.	-	.	ID=Cattle_Y_E02843;Parent=Cattle_Y_T01607;Dbxref=GeneID:132344580,GenBank:XM_059884246.1;gbkey=mRNA;gene=LOC132344580;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01607;gene_id=Cattle_Y_G00902;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884246.1-3
haplotype2-0000357	CAT	exon	48798236	48798651	.	-	.	ID=Cattle_Y_E02844;Parent=Cattle_Y_T01607;Dbxref=GeneID:132344580,GenBank:XM_059884246.1;gbkey=mRNA;gene=LOC132344580;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01607;gene_id=Cattle_Y_G00902;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884246.1-2
haplotype2-0000357	CAT	exon	48798748	48798763	.	-	.	ID=Cattle_Y_E02845;Parent=Cattle_Y_T01607;Dbxref=GeneID:132344580,GenBank:XM_059884246.1;gbkey=mRNA;gene=LOC132344580;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9273311;transcript_id=Cattle_Y_T01607;gene_id=Cattle_Y_G00902;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884246.1-1
haplotype2-0000357	CAT	CDS	48796649	48796726	.	-	0	ID=Cattle_Y_C02450;Parent=Cattle_Y_T01607;Dbxref=GeneID:132344580,GenBank:XP_059740229.1;Name=XP_059740229.1;gbkey=CDS;gene=LOC132344580;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740229.1;gene_id=Cattle_Y_G00902;transcript_id=Cattle_Y_T01607;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48796843	48796988	.	-	2	ID=Cattle_Y_C02451;Parent=Cattle_Y_T01607;Dbxref=GeneID:132344580,GenBank:XP_059740229.1;Name=XP_059740229.1;gbkey=CDS;gene=LOC132344580;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740229.1;gene_id=Cattle_Y_G00902;transcript_id=Cattle_Y_T01607;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48797084	48797195	.	-	0	ID=Cattle_Y_C02452;Parent=Cattle_Y_T01607;Dbxref=GeneID:132344580,GenBank:XP_059740229.1;Name=XP_059740229.1;gbkey=CDS;gene=LOC132344580;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740229.1;gene_id=Cattle_Y_G00902;transcript_id=Cattle_Y_T01607;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48797379	48797456	.	-	0	ID=Cattle_Y_C02453;Parent=Cattle_Y_T01607;Dbxref=GeneID:132344580,GenBank:XP_059740229.1;Name=XP_059740229.1;gbkey=CDS;gene=LOC132344580;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740229.1;gene_id=Cattle_Y_G00902;transcript_id=Cattle_Y_T01607;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48798236	48798651	.	-	2	ID=Cattle_Y_C02454;Parent=Cattle_Y_T01607;Dbxref=GeneID:132344580,GenBank:XP_059740229.1;Name=XP_059740229.1;gbkey=CDS;gene=LOC132344580;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740229.1;gene_id=Cattle_Y_G00902;transcript_id=Cattle_Y_T01607;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48798748	48798763	.	-	0	ID=Cattle_Y_C02455;Parent=Cattle_Y_T01607;Dbxref=GeneID:132344580,GenBank:XP_059740229.1;Name=XP_059740229.1;gbkey=CDS;gene=LOC132344580;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740229.1;start_range=.,9273311;gene_id=Cattle_Y_G00902;transcript_id=Cattle_Y_T01607;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48803062	48806249	.	-	.	ID=Cattle_Y_G00903;Dbxref=BGD:BT19054,GeneID:281554;Name=TSPY;description=testis specific protein%2C Y-linked 1;gbkey=Gene;gene=TSPY;gene_biotype=protein_coding;gene_synonym=TSPY-M1,TSPY1;gene_id=Cattle_Y_G00903;source_id=gene-TSPY
haplotype2-0000357	CAT	mRNA	48803062	48806249	.	-	.	ID=Cattle_Y_T01608;Parent=Cattle_Y_G00903;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Name=NM_001244608.1;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein%2C Y-linked 1;transcript_id=Cattle_Y_T01608;gene_id=Cattle_Y_G00903;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001244608.1
haplotype2-0000357	CAT	exon	48803062	48803277	.	-	.	ID=Cattle_Y_E02846;Parent=Cattle_Y_T01608;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01608;gene_id=Cattle_Y_G00903;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-7
haplotype2-0000357	CAT	exon	48803997	48804104	.	-	.	ID=Cattle_Y_E02847;Parent=Cattle_Y_T01608;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01608;gene_id=Cattle_Y_G00903;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-6
haplotype2-0000357	CAT	exon	48804221	48804366	.	-	.	ID=Cattle_Y_E02848;Parent=Cattle_Y_T01608;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01608;gene_id=Cattle_Y_G00903;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-5
haplotype2-0000357	CAT	exon	48804462	48804573	.	-	.	ID=Cattle_Y_E02849;Parent=Cattle_Y_T01608;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01608;gene_id=Cattle_Y_G00903;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-4
haplotype2-0000357	CAT	exon	48804757	48804834	.	-	.	ID=Cattle_Y_E02850;Parent=Cattle_Y_T01608;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01608;gene_id=Cattle_Y_G00903;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-3
haplotype2-0000357	CAT	exon	48805614	48806029	.	-	.	ID=Cattle_Y_E02851;Parent=Cattle_Y_T01608;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01608;gene_id=Cattle_Y_G00903;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-2
haplotype2-0000357	CAT	exon	48806126	48806249	.	-	.	ID=Cattle_Y_E02852;Parent=Cattle_Y_T01608;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01608;gene_id=Cattle_Y_G00903;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-1
haplotype2-0000357	CAT	CDS	48804027	48804104	.	-	0	ID=Cattle_Y_C02456;Parent=Cattle_Y_T01608;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_7;gene_id=Cattle_Y_G00903;transcript_id=Cattle_Y_T01608;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48804221	48804366	.	-	2	ID=Cattle_Y_C02457;Parent=Cattle_Y_T01608;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_7;gene_id=Cattle_Y_G00903;transcript_id=Cattle_Y_T01608;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48804462	48804573	.	-	0	ID=Cattle_Y_C02458;Parent=Cattle_Y_T01608;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_7;gene_id=Cattle_Y_G00903;transcript_id=Cattle_Y_T01608;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48804757	48804834	.	-	0	ID=Cattle_Y_C02459;Parent=Cattle_Y_T01608;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_7;gene_id=Cattle_Y_G00903;transcript_id=Cattle_Y_T01608;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48805614	48806029	.	-	2	ID=Cattle_Y_C02460;Parent=Cattle_Y_T01608;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_7;gene_id=Cattle_Y_G00903;transcript_id=Cattle_Y_T01608;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48806126	48806249	.	-	0	ID=Cattle_Y_C02461;Parent=Cattle_Y_T01608;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_7;gene_id=Cattle_Y_G00903;transcript_id=Cattle_Y_T01608;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48811405	48813625	.	-	.	ID=Cattle_Y_G00904;Dbxref=GeneID:132344583;Name=LOC132344583;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344583;gene_biotype=protein_coding;gene_id=Cattle_Y_G00904;source_id=gene-LOC132344583
haplotype2-0000357	CAT	mRNA	48811405	48813625	.	-	.	ID=Cattle_Y_T01609;Parent=Cattle_Y_G00904;Dbxref=GeneID:132344583,GenBank:XM_059884249.1;Name=XM_059884249.1;gbkey=mRNA;gene=LOC132344583;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01609;gene_id=Cattle_Y_G00904;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884249.1
haplotype2-0000357	CAT	exon	48811405	48811482	.	-	.	ID=Cattle_Y_E02853;Parent=Cattle_Y_T01609;Dbxref=GeneID:132344583,GenBank:XM_059884249.1;gbkey=mRNA;gene=LOC132344583;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01609;gene_id=Cattle_Y_G00904;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884249.1-6
haplotype2-0000357	CAT	exon	48811599	48811744	.	-	.	ID=Cattle_Y_E02854;Parent=Cattle_Y_T01609;Dbxref=GeneID:132344583,GenBank:XM_059884249.1;gbkey=mRNA;gene=LOC132344583;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01609;gene_id=Cattle_Y_G00904;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884249.1-6
haplotype2-0000357	CAT	exon	48811840	48811951	.	-	.	ID=Cattle_Y_E02855;Parent=Cattle_Y_T01609;Dbxref=GeneID:132344583,GenBank:XM_059884249.1;gbkey=mRNA;gene=LOC132344583;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01609;gene_id=Cattle_Y_G00904;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884249.1-6
haplotype2-0000357	CAT	exon	48812135	48812212	.	-	.	ID=Cattle_Y_E02856;Parent=Cattle_Y_T01609;Dbxref=GeneID:132344583,GenBank:XM_059884249.1;gbkey=mRNA;gene=LOC132344583;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01609;gene_id=Cattle_Y_G00904;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884249.1-6
haplotype2-0000357	CAT	exon	48812990	48813405	.	-	.	ID=Cattle_Y_E02857;Parent=Cattle_Y_T01609;Dbxref=GeneID:132344583,GenBank:XM_059884249.1;gbkey=mRNA;gene=LOC132344583;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01609;gene_id=Cattle_Y_G00904;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884249.1-6
haplotype2-0000357	CAT	exon	48813502	48813625	.	-	.	ID=Cattle_Y_E02858;Parent=Cattle_Y_T01609;Dbxref=GeneID:132344583,GenBank:XM_059884249.1;gbkey=mRNA;gene=LOC132344583;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01609;gene_id=Cattle_Y_G00904;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884249.1-1
haplotype2-0000357	CAT	CDS	48811405	48811482	.	-	0	ID=Cattle_Y_C02462;Parent=Cattle_Y_T01609;gene_id=Cattle_Y_G00904;transcript_id=Cattle_Y_T01609;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48811599	48811744	.	-	2	ID=Cattle_Y_C02463;Parent=Cattle_Y_T01609;gene_id=Cattle_Y_G00904;transcript_id=Cattle_Y_T01609;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48811840	48811951	.	-	0	ID=Cattle_Y_C02464;Parent=Cattle_Y_T01609;gene_id=Cattle_Y_G00904;transcript_id=Cattle_Y_T01609;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48812135	48812212	.	-	0	ID=Cattle_Y_C02465;Parent=Cattle_Y_T01609;gene_id=Cattle_Y_G00904;transcript_id=Cattle_Y_T01609;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48812990	48813405	.	-	2	ID=Cattle_Y_C02466;Parent=Cattle_Y_T01609;gene_id=Cattle_Y_G00904;transcript_id=Cattle_Y_T01609;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48813502	48813625	.	-	0	ID=Cattle_Y_C02467;Parent=Cattle_Y_T01609;gene_id=Cattle_Y_G00904;transcript_id=Cattle_Y_T01609;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48818778	48820890	.	-	.	ID=Cattle_Y_G00905;Dbxref=GeneID:132344574;Name=LOC132344574;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344574;gene_biotype=protein_coding;partial=true;start_range=.,9199421;gene_id=Cattle_Y_G00905;source_id=gene-LOC132344574
haplotype2-0000357	CAT	mRNA	48818778	48820890	.	-	.	ID=Cattle_Y_T01610;Parent=Cattle_Y_G00905;Dbxref=GeneID:132344574,GenBank:XM_059884239.1;Name=XM_059884239.1;gbkey=mRNA;gene=LOC132344574;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9199421;transcript_id=Cattle_Y_T01610;gene_id=Cattle_Y_G00905;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884239.1
haplotype2-0000357	CAT	exon	48818778	48818855	.	-	.	ID=Cattle_Y_E02859;Parent=Cattle_Y_T01610;Dbxref=GeneID:132344574,GenBank:XM_059884239.1;gbkey=mRNA;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01610;gene_id=Cattle_Y_G00905;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884239.1-6
haplotype2-0000357	CAT	exon	48818972	48819117	.	-	.	ID=Cattle_Y_E02860;Parent=Cattle_Y_T01610;Dbxref=GeneID:132344574,GenBank:XM_059884239.1;gbkey=mRNA;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01610;gene_id=Cattle_Y_G00905;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884239.1-5
haplotype2-0000357	CAT	exon	48819213	48819324	.	-	.	ID=Cattle_Y_E02861;Parent=Cattle_Y_T01610;Dbxref=GeneID:132344574,GenBank:XM_059884239.1;gbkey=mRNA;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01610;gene_id=Cattle_Y_G00905;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884239.1-4
haplotype2-0000357	CAT	exon	48819508	48819585	.	-	.	ID=Cattle_Y_E02862;Parent=Cattle_Y_T01610;Dbxref=GeneID:132344574,GenBank:XM_059884239.1;gbkey=mRNA;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01610;gene_id=Cattle_Y_G00905;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884239.1-3
haplotype2-0000357	CAT	exon	48820363	48820778	.	-	.	ID=Cattle_Y_E02863;Parent=Cattle_Y_T01610;Dbxref=GeneID:132344574,GenBank:XM_059884239.1;gbkey=mRNA;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01610;gene_id=Cattle_Y_G00905;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884239.1-2
haplotype2-0000357	CAT	exon	48820875	48820890	.	-	.	ID=Cattle_Y_E02864;Parent=Cattle_Y_T01610;Dbxref=GeneID:132344574,GenBank:XM_059884239.1;gbkey=mRNA;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9199421;transcript_id=Cattle_Y_T01610;gene_id=Cattle_Y_G00905;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884239.1-1
haplotype2-0000357	CAT	CDS	48818778	48818855	.	-	0	ID=Cattle_Y_C02468;Parent=Cattle_Y_T01610;Dbxref=GeneID:132344574,GenBank:XP_059740222.1;Name=XP_059740222.1;gbkey=CDS;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740222.1;gene_id=Cattle_Y_G00905;transcript_id=Cattle_Y_T01610;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48818972	48819117	.	-	2	ID=Cattle_Y_C02469;Parent=Cattle_Y_T01610;Dbxref=GeneID:132344574,GenBank:XP_059740222.1;Name=XP_059740222.1;gbkey=CDS;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740222.1;gene_id=Cattle_Y_G00905;transcript_id=Cattle_Y_T01610;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48819213	48819324	.	-	0	ID=Cattle_Y_C02470;Parent=Cattle_Y_T01610;Dbxref=GeneID:132344574,GenBank:XP_059740222.1;Name=XP_059740222.1;gbkey=CDS;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740222.1;gene_id=Cattle_Y_G00905;transcript_id=Cattle_Y_T01610;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48819508	48819585	.	-	0	ID=Cattle_Y_C02471;Parent=Cattle_Y_T01610;Dbxref=GeneID:132344574,GenBank:XP_059740222.1;Name=XP_059740222.1;gbkey=CDS;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740222.1;gene_id=Cattle_Y_G00905;transcript_id=Cattle_Y_T01610;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48820363	48820778	.	-	2	ID=Cattle_Y_C02472;Parent=Cattle_Y_T01610;Dbxref=GeneID:132344574,GenBank:XP_059740222.1;Name=XP_059740222.1;gbkey=CDS;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740222.1;gene_id=Cattle_Y_G00905;transcript_id=Cattle_Y_T01610;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48820875	48820890	.	-	0	ID=Cattle_Y_C02473;Parent=Cattle_Y_T01610;Dbxref=GeneID:132344574,GenBank:XP_059740222.1;Name=XP_059740222.1;gbkey=CDS;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740222.1;start_range=.,9199421;gene_id=Cattle_Y_G00905;transcript_id=Cattle_Y_T01610;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48826155	48828287	.	-	.	ID=Cattle_Y_G00906;Dbxref=GeneID:132344578;Name=LOC132344578;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344578;gene_biotype=protein_coding;partial=true;start_range=.,9251121;gene_id=Cattle_Y_G00906;source_id=gene-LOC132344578
haplotype2-0000357	CAT	mRNA	48826155	48828287	.	-	.	ID=Cattle_Y_T01611;Parent=Cattle_Y_G00906;Dbxref=GeneID:132344578,GenBank:XM_059884243.1;Name=XM_059884243.1;gbkey=mRNA;gene=LOC132344578;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9251121;transcript_id=Cattle_Y_T01611;gene_id=Cattle_Y_G00906;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884243.1
haplotype2-0000357	CAT	exon	48826155	48826232	.	-	.	ID=Cattle_Y_E02865;Parent=Cattle_Y_T01611;Dbxref=GeneID:132344578,GenBank:XM_059884243.1;gbkey=mRNA;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01611;gene_id=Cattle_Y_G00906;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884243.1-6
haplotype2-0000357	CAT	exon	48826349	48826494	.	-	.	ID=Cattle_Y_E02866;Parent=Cattle_Y_T01611;Dbxref=GeneID:132344578,GenBank:XM_059884243.1;gbkey=mRNA;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01611;gene_id=Cattle_Y_G00906;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884243.1-5
haplotype2-0000357	CAT	exon	48826590	48826701	.	-	.	ID=Cattle_Y_E02867;Parent=Cattle_Y_T01611;Dbxref=GeneID:132344578,GenBank:XM_059884243.1;gbkey=mRNA;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01611;gene_id=Cattle_Y_G00906;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884243.1-4
haplotype2-0000357	CAT	exon	48826885	48826962	.	-	.	ID=Cattle_Y_E02868;Parent=Cattle_Y_T01611;Dbxref=GeneID:132344578,GenBank:XM_059884243.1;gbkey=mRNA;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01611;gene_id=Cattle_Y_G00906;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884243.1-3
haplotype2-0000357	CAT	exon	48827760	48828175	.	-	.	ID=Cattle_Y_E02869;Parent=Cattle_Y_T01611;Dbxref=GeneID:132344578,GenBank:XM_059884243.1;gbkey=mRNA;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01611;gene_id=Cattle_Y_G00906;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884243.1-2
haplotype2-0000357	CAT	exon	48828272	48828287	.	-	.	ID=Cattle_Y_E02870;Parent=Cattle_Y_T01611;Dbxref=GeneID:132344578,GenBank:XM_059884243.1;gbkey=mRNA;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9251121;transcript_id=Cattle_Y_T01611;gene_id=Cattle_Y_G00906;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884243.1-1
haplotype2-0000357	CAT	CDS	48826155	48826232	.	-	0	ID=Cattle_Y_C02474;Parent=Cattle_Y_T01611;Dbxref=GeneID:132344578,GenBank:XP_059740226.1;Name=XP_059740226.1;gbkey=CDS;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740226.1;gene_id=Cattle_Y_G00906;transcript_id=Cattle_Y_T01611;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48826349	48826494	.	-	2	ID=Cattle_Y_C02475;Parent=Cattle_Y_T01611;Dbxref=GeneID:132344578,GenBank:XP_059740226.1;Name=XP_059740226.1;gbkey=CDS;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740226.1;gene_id=Cattle_Y_G00906;transcript_id=Cattle_Y_T01611;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48826590	48826701	.	-	0	ID=Cattle_Y_C02476;Parent=Cattle_Y_T01611;Dbxref=GeneID:132344578,GenBank:XP_059740226.1;Name=XP_059740226.1;gbkey=CDS;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740226.1;gene_id=Cattle_Y_G00906;transcript_id=Cattle_Y_T01611;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48826885	48826962	.	-	0	ID=Cattle_Y_C02477;Parent=Cattle_Y_T01611;Dbxref=GeneID:132344578,GenBank:XP_059740226.1;Name=XP_059740226.1;gbkey=CDS;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740226.1;gene_id=Cattle_Y_G00906;transcript_id=Cattle_Y_T01611;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48827760	48828175	.	-	2	ID=Cattle_Y_C02478;Parent=Cattle_Y_T01611;Dbxref=GeneID:132344578,GenBank:XP_059740226.1;Name=XP_059740226.1;gbkey=CDS;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740226.1;gene_id=Cattle_Y_G00906;transcript_id=Cattle_Y_T01611;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48828272	48828287	.	-	0	ID=Cattle_Y_C02479;Parent=Cattle_Y_T01611;Dbxref=GeneID:132344578,GenBank:XP_059740226.1;Name=XP_059740226.1;gbkey=CDS;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740226.1;start_range=.,9251121;gene_id=Cattle_Y_G00906;transcript_id=Cattle_Y_T01611;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48833551	48835665	.	-	.	ID=Cattle_Y_G00907;Dbxref=GeneID:132344578;Name=LOC132344578;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344578;gene_biotype=protein_coding;partial=true;start_range=.,9251121;gene_id=Cattle_Y_G00907;source_id=gene-LOC132344578
haplotype2-0000357	CAT	mRNA	48833551	48835665	.	-	.	ID=Cattle_Y_T01612;Parent=Cattle_Y_G00907;Dbxref=GeneID:132344578,GenBank:XM_059884243.1;Name=XM_059884243.1;gbkey=mRNA;gene=LOC132344578;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9251121;transcript_id=Cattle_Y_T01612;gene_id=Cattle_Y_G00907;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884243.1
haplotype2-0000357	CAT	exon	48833551	48833628	.	-	.	ID=Cattle_Y_E02871;Parent=Cattle_Y_T01612;Dbxref=GeneID:132344578,GenBank:XM_059884243.1;gbkey=mRNA;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01612;gene_id=Cattle_Y_G00907;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884243.1-6
haplotype2-0000357	CAT	exon	48833745	48833890	.	-	.	ID=Cattle_Y_E02872;Parent=Cattle_Y_T01612;Dbxref=GeneID:132344578,GenBank:XM_059884243.1;gbkey=mRNA;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01612;gene_id=Cattle_Y_G00907;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884243.1-5
haplotype2-0000357	CAT	exon	48833986	48834097	.	-	.	ID=Cattle_Y_E02873;Parent=Cattle_Y_T01612;Dbxref=GeneID:132344578,GenBank:XM_059884243.1;gbkey=mRNA;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01612;gene_id=Cattle_Y_G00907;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884243.1-4
haplotype2-0000357	CAT	exon	48834281	48834358	.	-	.	ID=Cattle_Y_E02874;Parent=Cattle_Y_T01612;Dbxref=GeneID:132344578,GenBank:XM_059884243.1;gbkey=mRNA;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01612;gene_id=Cattle_Y_G00907;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884243.1-3
haplotype2-0000357	CAT	exon	48835138	48835553	.	-	.	ID=Cattle_Y_E02875;Parent=Cattle_Y_T01612;Dbxref=GeneID:132344578,GenBank:XM_059884243.1;gbkey=mRNA;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01612;gene_id=Cattle_Y_G00907;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884243.1-2
haplotype2-0000357	CAT	exon	48835650	48835665	.	-	.	ID=Cattle_Y_E02876;Parent=Cattle_Y_T01612;Dbxref=GeneID:132344578,GenBank:XM_059884243.1;gbkey=mRNA;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9251121;transcript_id=Cattle_Y_T01612;gene_id=Cattle_Y_G00907;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884243.1-1
haplotype2-0000357	CAT	CDS	48833551	48833628	.	-	0	ID=Cattle_Y_C02480;Parent=Cattle_Y_T01612;Dbxref=GeneID:132344578,GenBank:XP_059740226.1;Name=XP_059740226.1;gbkey=CDS;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740226.1_2;gene_id=Cattle_Y_G00907;transcript_id=Cattle_Y_T01612;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48833745	48833890	.	-	2	ID=Cattle_Y_C02481;Parent=Cattle_Y_T01612;Dbxref=GeneID:132344578,GenBank:XP_059740226.1;Name=XP_059740226.1;gbkey=CDS;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740226.1_2;gene_id=Cattle_Y_G00907;transcript_id=Cattle_Y_T01612;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48833986	48834097	.	-	0	ID=Cattle_Y_C02482;Parent=Cattle_Y_T01612;Dbxref=GeneID:132344578,GenBank:XP_059740226.1;Name=XP_059740226.1;gbkey=CDS;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740226.1_2;gene_id=Cattle_Y_G00907;transcript_id=Cattle_Y_T01612;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48834281	48834358	.	-	0	ID=Cattle_Y_C02483;Parent=Cattle_Y_T01612;Dbxref=GeneID:132344578,GenBank:XP_059740226.1;Name=XP_059740226.1;gbkey=CDS;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740226.1_2;gene_id=Cattle_Y_G00907;transcript_id=Cattle_Y_T01612;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48835138	48835553	.	-	2	ID=Cattle_Y_C02484;Parent=Cattle_Y_T01612;Dbxref=GeneID:132344578,GenBank:XP_059740226.1;Name=XP_059740226.1;gbkey=CDS;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740226.1_2;gene_id=Cattle_Y_G00907;transcript_id=Cattle_Y_T01612;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48835650	48835665	.	-	0	ID=Cattle_Y_C02485;Parent=Cattle_Y_T01612;Dbxref=GeneID:132344578,GenBank:XP_059740226.1;Name=XP_059740226.1;gbkey=CDS;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740226.1_2;start_range=.,9251121;gene_id=Cattle_Y_G00907;transcript_id=Cattle_Y_T01612;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48841067	48843179	.	-	.	ID=Cattle_Y_G00908;Dbxref=GeneID:132344573;Name=LOC132344573;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344573;gene_biotype=protein_coding;partial=true;start_range=.,9192022;gene_id=Cattle_Y_G00908;source_id=gene-LOC132344573
haplotype2-0000357	CAT	mRNA	48841067	48843179	.	-	.	ID=Cattle_Y_T01613;Parent=Cattle_Y_G00908;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;Name=XM_059884238.1;gbkey=mRNA;gene=LOC132344573;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9192022;transcript_id=Cattle_Y_T01613;gene_id=Cattle_Y_G00908;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884238.1
haplotype2-0000357	CAT	exon	48841067	48841144	.	-	.	ID=Cattle_Y_E02877;Parent=Cattle_Y_T01613;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01613;gene_id=Cattle_Y_G00908;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-6
haplotype2-0000357	CAT	exon	48841261	48841406	.	-	.	ID=Cattle_Y_E02878;Parent=Cattle_Y_T01613;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01613;gene_id=Cattle_Y_G00908;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-5
haplotype2-0000357	CAT	exon	48841502	48841613	.	-	.	ID=Cattle_Y_E02879;Parent=Cattle_Y_T01613;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01613;gene_id=Cattle_Y_G00908;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-4
haplotype2-0000357	CAT	exon	48841797	48841874	.	-	.	ID=Cattle_Y_E02880;Parent=Cattle_Y_T01613;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01613;gene_id=Cattle_Y_G00908;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-3
haplotype2-0000357	CAT	exon	48842652	48843067	.	-	.	ID=Cattle_Y_E02881;Parent=Cattle_Y_T01613;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01613;gene_id=Cattle_Y_G00908;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-2
haplotype2-0000357	CAT	exon	48843164	48843179	.	-	.	ID=Cattle_Y_E02882;Parent=Cattle_Y_T01613;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9192022;transcript_id=Cattle_Y_T01613;gene_id=Cattle_Y_G00908;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-1
haplotype2-0000357	CAT	CDS	48841067	48841144	.	-	0	ID=Cattle_Y_C02486;Parent=Cattle_Y_T01613;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_2;gene_id=Cattle_Y_G00908;transcript_id=Cattle_Y_T01613;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48841261	48841406	.	-	2	ID=Cattle_Y_C02487;Parent=Cattle_Y_T01613;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_2;gene_id=Cattle_Y_G00908;transcript_id=Cattle_Y_T01613;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48841502	48841613	.	-	0	ID=Cattle_Y_C02488;Parent=Cattle_Y_T01613;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_2;gene_id=Cattle_Y_G00908;transcript_id=Cattle_Y_T01613;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48841797	48841874	.	-	0	ID=Cattle_Y_C02489;Parent=Cattle_Y_T01613;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_2;gene_id=Cattle_Y_G00908;transcript_id=Cattle_Y_T01613;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48842652	48842738	.	-	0	ID=Cattle_Y_C02490;Parent=Cattle_Y_T01613;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_2;gene_id=Cattle_Y_G00908;transcript_id=Cattle_Y_T01613;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48848579	48850701	.	-	.	ID=Cattle_Y_G00909;Dbxref=GeneID:132344575;Name=LOC132344575;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344575;gene_biotype=protein_coding;partial=true;start_range=.,9228925;gene_id=Cattle_Y_G00909;source_id=gene-LOC132344575
haplotype2-0000357	CAT	mRNA	48848579	48850701	.	-	.	ID=Cattle_Y_T01614;Parent=Cattle_Y_G00909;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;Name=XM_059884240.1;gbkey=mRNA;gene=LOC132344575;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01614;gene_id=Cattle_Y_G00909;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884240.1
haplotype2-0000357	CAT	exon	48848579	48848656	.	-	.	ID=Cattle_Y_E02883;Parent=Cattle_Y_T01614;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01614;gene_id=Cattle_Y_G00909;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-6
haplotype2-0000357	CAT	exon	48848773	48848918	.	-	.	ID=Cattle_Y_E02884;Parent=Cattle_Y_T01614;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01614;gene_id=Cattle_Y_G00909;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-5
haplotype2-0000357	CAT	exon	48849014	48849124	.	-	.	ID=Cattle_Y_E02885;Parent=Cattle_Y_T01614;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01614;gene_id=Cattle_Y_G00909;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-4
haplotype2-0000357	CAT	exon	48849308	48849385	.	-	.	ID=Cattle_Y_E02886;Parent=Cattle_Y_T01614;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01614;gene_id=Cattle_Y_G00909;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-3
haplotype2-0000357	CAT	exon	48850173	48850588	.	-	.	ID=Cattle_Y_E02887;Parent=Cattle_Y_T01614;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01614;gene_id=Cattle_Y_G00909;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-2
haplotype2-0000357	CAT	exon	48850686	48850701	.	-	.	ID=Cattle_Y_E02888;Parent=Cattle_Y_T01614;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01614;gene_id=Cattle_Y_G00909;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-1
haplotype2-0000357	CAT	CDS	48848579	48848656	.	-	1	ID=Cattle_Y_C02491;Parent=Cattle_Y_T01614;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_13;gene_id=Cattle_Y_G00909;transcript_id=Cattle_Y_T01614;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48848773	48848918	.	-	0	ID=Cattle_Y_C02492;Parent=Cattle_Y_T01614;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_13;gene_id=Cattle_Y_G00909;transcript_id=Cattle_Y_T01614;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48849014	48849124	.	-	0	ID=Cattle_Y_C02493;Parent=Cattle_Y_T01614;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_13;gene_id=Cattle_Y_G00909;transcript_id=Cattle_Y_T01614;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48849308	48849385	.	-	0	ID=Cattle_Y_C02494;Parent=Cattle_Y_T01614;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_13;gene_id=Cattle_Y_G00909;transcript_id=Cattle_Y_T01614;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48850173	48850588	.	-	2	ID=Cattle_Y_C02495;Parent=Cattle_Y_T01614;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_13;gene_id=Cattle_Y_G00909;transcript_id=Cattle_Y_T01614;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48850686	48850701	.	-	0	ID=Cattle_Y_C02496;Parent=Cattle_Y_T01614;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_13;start_range=.,9228925;gene_id=Cattle_Y_G00909;transcript_id=Cattle_Y_T01614;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48855144	48858339	.	-	.	ID=Cattle_Y_G00910;Dbxref=BGD:BT19054,GeneID:281554;Name=TSPY;description=testis specific protein%2C Y-linked 1;gbkey=Gene;gene=TSPY;gene_biotype=protein_coding;gene_synonym=TSPY-M1,TSPY1;gene_id=Cattle_Y_G00910;source_id=gene-TSPY
haplotype2-0000357	CAT	mRNA	48855144	48858339	.	-	.	ID=Cattle_Y_T01615;Parent=Cattle_Y_G00910;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Name=NM_001244608.1;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein%2C Y-linked 1;transcript_id=Cattle_Y_T01615;gene_id=Cattle_Y_G00910;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001244608.1
haplotype2-0000357	CAT	exon	48855144	48855359	.	-	.	ID=Cattle_Y_E02889;Parent=Cattle_Y_T01615;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01615;gene_id=Cattle_Y_G00910;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-7
haplotype2-0000357	CAT	exon	48856079	48856186	.	-	.	ID=Cattle_Y_E02890;Parent=Cattle_Y_T01615;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01615;gene_id=Cattle_Y_G00910;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-6
haplotype2-0000357	CAT	exon	48856303	48856448	.	-	.	ID=Cattle_Y_E02891;Parent=Cattle_Y_T01615;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01615;gene_id=Cattle_Y_G00910;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-5
haplotype2-0000357	CAT	exon	48856544	48856655	.	-	.	ID=Cattle_Y_E02892;Parent=Cattle_Y_T01615;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01615;gene_id=Cattle_Y_G00910;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-4
haplotype2-0000357	CAT	exon	48856839	48856916	.	-	.	ID=Cattle_Y_E02893;Parent=Cattle_Y_T01615;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01615;gene_id=Cattle_Y_G00910;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-3
haplotype2-0000357	CAT	exon	48857704	48858119	.	-	.	ID=Cattle_Y_E02894;Parent=Cattle_Y_T01615;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01615;gene_id=Cattle_Y_G00910;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-2
haplotype2-0000357	CAT	exon	48858216	48858339	.	-	.	ID=Cattle_Y_E02895;Parent=Cattle_Y_T01615;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01615;gene_id=Cattle_Y_G00910;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-1
haplotype2-0000357	CAT	CDS	48856109	48856186	.	-	0	ID=Cattle_Y_C02497;Parent=Cattle_Y_T01615;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_1;gene_id=Cattle_Y_G00910;transcript_id=Cattle_Y_T01615;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48856303	48856448	.	-	2	ID=Cattle_Y_C02498;Parent=Cattle_Y_T01615;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_1;gene_id=Cattle_Y_G00910;transcript_id=Cattle_Y_T01615;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48856544	48856655	.	-	0	ID=Cattle_Y_C02499;Parent=Cattle_Y_T01615;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_1;gene_id=Cattle_Y_G00910;transcript_id=Cattle_Y_T01615;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48856839	48856916	.	-	0	ID=Cattle_Y_C02500;Parent=Cattle_Y_T01615;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_1;gene_id=Cattle_Y_G00910;transcript_id=Cattle_Y_T01615;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48857704	48858119	.	-	2	ID=Cattle_Y_C02501;Parent=Cattle_Y_T01615;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_1;gene_id=Cattle_Y_G00910;transcript_id=Cattle_Y_T01615;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48858216	48858339	.	-	0	ID=Cattle_Y_C02502;Parent=Cattle_Y_T01615;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_1;gene_id=Cattle_Y_G00910;transcript_id=Cattle_Y_T01615;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48863635	48865766	.	-	.	ID=Cattle_Y_G00911;Dbxref=GeneID:132344577;Name=LOC132344577;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344577;gene_biotype=protein_coding;partial=true;start_range=.,9243718;gene_id=Cattle_Y_G00911;source_id=gene-LOC132344577
haplotype2-0000357	CAT	mRNA	48863635	48865766	.	-	.	ID=Cattle_Y_T01616;Parent=Cattle_Y_G00911;Dbxref=GeneID:132344577,GenBank:XM_059884242.1;Name=XM_059884242.1;gbkey=mRNA;gene=LOC132344577;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9243718;transcript_id=Cattle_Y_T01616;gene_id=Cattle_Y_G00911;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884242.1
haplotype2-0000357	CAT	exon	48863635	48863712	.	-	.	ID=Cattle_Y_E02896;Parent=Cattle_Y_T01616;Dbxref=GeneID:132344577,GenBank:XM_059884242.1;gbkey=mRNA;gene=LOC132344577;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01616;gene_id=Cattle_Y_G00911;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884242.1-6
haplotype2-0000357	CAT	exon	48863829	48863974	.	-	.	ID=Cattle_Y_E02897;Parent=Cattle_Y_T01616;Dbxref=GeneID:132344577,GenBank:XM_059884242.1;gbkey=mRNA;gene=LOC132344577;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01616;gene_id=Cattle_Y_G00911;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884242.1-5
haplotype2-0000357	CAT	exon	48864070	48864181	.	-	.	ID=Cattle_Y_E02898;Parent=Cattle_Y_T01616;Dbxref=GeneID:132344577,GenBank:XM_059884242.1;gbkey=mRNA;gene=LOC132344577;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01616;gene_id=Cattle_Y_G00911;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884242.1-4
haplotype2-0000357	CAT	exon	48864365	48864442	.	-	.	ID=Cattle_Y_E02899;Parent=Cattle_Y_T01616;Dbxref=GeneID:132344577,GenBank:XM_059884242.1;gbkey=mRNA;gene=LOC132344577;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01616;gene_id=Cattle_Y_G00911;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884242.1-3
haplotype2-0000357	CAT	exon	48865240	48865655	.	-	.	ID=Cattle_Y_E02900;Parent=Cattle_Y_T01616;Dbxref=GeneID:132344577,GenBank:XM_059884242.1;gbkey=mRNA;gene=LOC132344577;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01616;gene_id=Cattle_Y_G00911;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884242.1-2
haplotype2-0000357	CAT	exon	48865751	48865766	.	-	.	ID=Cattle_Y_E02901;Parent=Cattle_Y_T01616;Dbxref=GeneID:132344577,GenBank:XM_059884242.1;gbkey=mRNA;gene=LOC132344577;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9243718;transcript_id=Cattle_Y_T01616;gene_id=Cattle_Y_G00911;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884242.1-1
haplotype2-0000357	CAT	CDS	48863635	48863712	.	-	0	ID=Cattle_Y_C02503;Parent=Cattle_Y_T01616;Dbxref=GeneID:132344577,GenBank:XP_059740225.1;Name=XP_059740225.1;gbkey=CDS;gene=LOC132344577;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740225.1;gene_id=Cattle_Y_G00911;transcript_id=Cattle_Y_T01616;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48863829	48863974	.	-	2	ID=Cattle_Y_C02504;Parent=Cattle_Y_T01616;Dbxref=GeneID:132344577,GenBank:XP_059740225.1;Name=XP_059740225.1;gbkey=CDS;gene=LOC132344577;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740225.1;gene_id=Cattle_Y_G00911;transcript_id=Cattle_Y_T01616;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48864070	48864181	.	-	0	ID=Cattle_Y_C02505;Parent=Cattle_Y_T01616;Dbxref=GeneID:132344577,GenBank:XP_059740225.1;Name=XP_059740225.1;gbkey=CDS;gene=LOC132344577;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740225.1;gene_id=Cattle_Y_G00911;transcript_id=Cattle_Y_T01616;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48864365	48864442	.	-	0	ID=Cattle_Y_C02506;Parent=Cattle_Y_T01616;Dbxref=GeneID:132344577,GenBank:XP_059740225.1;Name=XP_059740225.1;gbkey=CDS;gene=LOC132344577;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740225.1;gene_id=Cattle_Y_G00911;transcript_id=Cattle_Y_T01616;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48865240	48865655	.	-	2	ID=Cattle_Y_C02507;Parent=Cattle_Y_T01616;Dbxref=GeneID:132344577,GenBank:XP_059740225.1;Name=XP_059740225.1;gbkey=CDS;gene=LOC132344577;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740225.1;gene_id=Cattle_Y_G00911;transcript_id=Cattle_Y_T01616;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48865751	48865766	.	-	0	ID=Cattle_Y_C02508;Parent=Cattle_Y_T01616;Dbxref=GeneID:132344577,GenBank:XP_059740225.1;Name=XP_059740225.1;gbkey=CDS;gene=LOC132344577;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740225.1;start_range=.,9243718;gene_id=Cattle_Y_G00911;transcript_id=Cattle_Y_T01616;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48871029	48873268	.	-	.	ID=Cattle_Y_G00912;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00912;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	48871029	48873268	.	-	.	ID=Cattle_Y_T01617;Parent=Cattle_Y_G00912;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01617;gene_id=Cattle_Y_G00912;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	48871029	48871106	.	-	.	ID=Cattle_Y_E02902;Parent=Cattle_Y_T01617;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01617;gene_id=Cattle_Y_G00912;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	48871223	48871368	.	-	.	ID=Cattle_Y_E02903;Parent=Cattle_Y_T01617;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01617;gene_id=Cattle_Y_G00912;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	48871464	48871575	.	-	.	ID=Cattle_Y_E02904;Parent=Cattle_Y_T01617;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01617;gene_id=Cattle_Y_G00912;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	48871759	48871836	.	-	.	ID=Cattle_Y_E02905;Parent=Cattle_Y_T01617;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01617;gene_id=Cattle_Y_G00912;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	48872634	48873049	.	-	.	ID=Cattle_Y_E02906;Parent=Cattle_Y_T01617;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01617;gene_id=Cattle_Y_G00912;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	48873145	48873268	.	-	.	ID=Cattle_Y_E02907;Parent=Cattle_Y_T01617;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01617;gene_id=Cattle_Y_G00912;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	48871029	48871106	.	-	0	ID=Cattle_Y_C02509;Parent=Cattle_Y_T01617;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1;gene_id=Cattle_Y_G00912;transcript_id=Cattle_Y_T01617;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48871223	48871368	.	-	2	ID=Cattle_Y_C02510;Parent=Cattle_Y_T01617;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1;gene_id=Cattle_Y_G00912;transcript_id=Cattle_Y_T01617;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48871464	48871575	.	-	0	ID=Cattle_Y_C02511;Parent=Cattle_Y_T01617;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1;gene_id=Cattle_Y_G00912;transcript_id=Cattle_Y_T01617;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48871759	48871836	.	-	0	ID=Cattle_Y_C02512;Parent=Cattle_Y_T01617;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1;gene_id=Cattle_Y_G00912;transcript_id=Cattle_Y_T01617;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48872634	48873049	.	-	2	ID=Cattle_Y_C02513;Parent=Cattle_Y_T01617;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1;gene_id=Cattle_Y_G00912;transcript_id=Cattle_Y_T01617;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48873145	48873268	.	-	0	ID=Cattle_Y_C02514;Parent=Cattle_Y_T01617;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1;gene_id=Cattle_Y_G00912;transcript_id=Cattle_Y_T01617;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48878424	48880644	.	-	.	ID=Cattle_Y_G00913;Dbxref=GeneID:132344581;Name=LOC132344581;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344581;gene_biotype=protein_coding;gene_id=Cattle_Y_G00913;source_id=gene-LOC132344581
haplotype2-0000357	CAT	mRNA	48878424	48880644	.	-	.	ID=Cattle_Y_T01618;Parent=Cattle_Y_G00913;Dbxref=GeneID:132344581,GenBank:XM_059884247.1;Name=XM_059884247.1;gbkey=mRNA;gene=LOC132344581;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01618;gene_id=Cattle_Y_G00913;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884247.1
haplotype2-0000357	CAT	exon	48878424	48878501	.	-	.	ID=Cattle_Y_E02908;Parent=Cattle_Y_T01618;Dbxref=GeneID:132344581,GenBank:XM_059884247.1;gbkey=mRNA;gene=LOC132344581;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01618;gene_id=Cattle_Y_G00913;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884247.1-6
haplotype2-0000357	CAT	exon	48878618	48878763	.	-	.	ID=Cattle_Y_E02909;Parent=Cattle_Y_T01618;Dbxref=GeneID:132344581,GenBank:XM_059884247.1;gbkey=mRNA;gene=LOC132344581;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01618;gene_id=Cattle_Y_G00913;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884247.1-5
haplotype2-0000357	CAT	exon	48878859	48878970	.	-	.	ID=Cattle_Y_E02910;Parent=Cattle_Y_T01618;Dbxref=GeneID:132344581,GenBank:XM_059884247.1;gbkey=mRNA;gene=LOC132344581;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01618;gene_id=Cattle_Y_G00913;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884247.1-4
haplotype2-0000357	CAT	exon	48879154	48879231	.	-	.	ID=Cattle_Y_E02911;Parent=Cattle_Y_T01618;Dbxref=GeneID:132344581,GenBank:XM_059884247.1;gbkey=mRNA;gene=LOC132344581;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01618;gene_id=Cattle_Y_G00913;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884247.1-3
haplotype2-0000357	CAT	exon	48880009	48880424	.	-	.	ID=Cattle_Y_E02912;Parent=Cattle_Y_T01618;Dbxref=GeneID:132344581,GenBank:XM_059884247.1;gbkey=mRNA;gene=LOC132344581;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01618;gene_id=Cattle_Y_G00913;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884247.1-2
haplotype2-0000357	CAT	exon	48880521	48880644	.	-	.	ID=Cattle_Y_E02913;Parent=Cattle_Y_T01618;Dbxref=GeneID:132344581,GenBank:XM_059884247.1;gbkey=mRNA;gene=LOC132344581;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01618;gene_id=Cattle_Y_G00913;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884247.1-1
haplotype2-0000357	CAT	CDS	48878424	48878501	.	-	0	ID=Cattle_Y_C02515;Parent=Cattle_Y_T01618;Dbxref=GeneID:132344581,GenBank:XP_059740230.1;Name=XP_059740230.1;gbkey=CDS;gene=LOC132344581;product=testis-specific Y-encoded protein 1;protein_id=XP_059740230.1_1;gene_id=Cattle_Y_G00913;transcript_id=Cattle_Y_T01618;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48878618	48878763	.	-	2	ID=Cattle_Y_C02516;Parent=Cattle_Y_T01618;Dbxref=GeneID:132344581,GenBank:XP_059740230.1;Name=XP_059740230.1;gbkey=CDS;gene=LOC132344581;product=testis-specific Y-encoded protein 1;protein_id=XP_059740230.1_1;gene_id=Cattle_Y_G00913;transcript_id=Cattle_Y_T01618;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48878859	48878970	.	-	0	ID=Cattle_Y_C02517;Parent=Cattle_Y_T01618;Dbxref=GeneID:132344581,GenBank:XP_059740230.1;Name=XP_059740230.1;gbkey=CDS;gene=LOC132344581;product=testis-specific Y-encoded protein 1;protein_id=XP_059740230.1_1;gene_id=Cattle_Y_G00913;transcript_id=Cattle_Y_T01618;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48879154	48879231	.	-	0	ID=Cattle_Y_C02518;Parent=Cattle_Y_T01618;Dbxref=GeneID:132344581,GenBank:XP_059740230.1;Name=XP_059740230.1;gbkey=CDS;gene=LOC132344581;product=testis-specific Y-encoded protein 1;protein_id=XP_059740230.1_1;gene_id=Cattle_Y_G00913;transcript_id=Cattle_Y_T01618;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48880009	48880424	.	-	2	ID=Cattle_Y_C02519;Parent=Cattle_Y_T01618;Dbxref=GeneID:132344581,GenBank:XP_059740230.1;Name=XP_059740230.1;gbkey=CDS;gene=LOC132344581;product=testis-specific Y-encoded protein 1;protein_id=XP_059740230.1_1;gene_id=Cattle_Y_G00913;transcript_id=Cattle_Y_T01618;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48880521	48880644	.	-	0	ID=Cattle_Y_C02520;Parent=Cattle_Y_T01618;Dbxref=GeneID:132344581,GenBank:XP_059740230.1;Name=XP_059740230.1;gbkey=CDS;gene=LOC132344581;product=testis-specific Y-encoded protein 1;protein_id=XP_059740230.1_1;gene_id=Cattle_Y_G00913;transcript_id=Cattle_Y_T01618;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48885801	48887913	.	-	.	ID=Cattle_Y_G00914;Dbxref=GeneID:132344573;Name=LOC132344573;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344573;gene_biotype=protein_coding;partial=true;start_range=.,9192022;gene_id=Cattle_Y_G00914;source_id=gene-LOC132344573
haplotype2-0000357	CAT	mRNA	48885801	48887913	.	-	.	ID=Cattle_Y_T01619;Parent=Cattle_Y_G00914;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;Name=XM_059884238.1;gbkey=mRNA;gene=LOC132344573;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9192022;transcript_id=Cattle_Y_T01619;gene_id=Cattle_Y_G00914;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884238.1
haplotype2-0000357	CAT	exon	48885801	48885878	.	-	.	ID=Cattle_Y_E02914;Parent=Cattle_Y_T01619;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01619;gene_id=Cattle_Y_G00914;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-6
haplotype2-0000357	CAT	exon	48885995	48886140	.	-	.	ID=Cattle_Y_E02915;Parent=Cattle_Y_T01619;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01619;gene_id=Cattle_Y_G00914;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-5
haplotype2-0000357	CAT	exon	48886236	48886347	.	-	.	ID=Cattle_Y_E02916;Parent=Cattle_Y_T01619;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01619;gene_id=Cattle_Y_G00914;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-4
haplotype2-0000357	CAT	exon	48886531	48886608	.	-	.	ID=Cattle_Y_E02917;Parent=Cattle_Y_T01619;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01619;gene_id=Cattle_Y_G00914;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-3
haplotype2-0000357	CAT	exon	48887386	48887801	.	-	.	ID=Cattle_Y_E02918;Parent=Cattle_Y_T01619;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01619;gene_id=Cattle_Y_G00914;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-2
haplotype2-0000357	CAT	exon	48887898	48887913	.	-	.	ID=Cattle_Y_E02919;Parent=Cattle_Y_T01619;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9192022;transcript_id=Cattle_Y_T01619;gene_id=Cattle_Y_G00914;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-1
haplotype2-0000357	CAT	CDS	48885801	48885878	.	-	0	ID=Cattle_Y_C02521;Parent=Cattle_Y_T01619;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_5;gene_id=Cattle_Y_G00914;transcript_id=Cattle_Y_T01619;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48885995	48886140	.	-	2	ID=Cattle_Y_C02522;Parent=Cattle_Y_T01619;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_5;gene_id=Cattle_Y_G00914;transcript_id=Cattle_Y_T01619;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48886236	48886347	.	-	0	ID=Cattle_Y_C02523;Parent=Cattle_Y_T01619;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_5;gene_id=Cattle_Y_G00914;transcript_id=Cattle_Y_T01619;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48886531	48886608	.	-	0	ID=Cattle_Y_C02524;Parent=Cattle_Y_T01619;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_5;gene_id=Cattle_Y_G00914;transcript_id=Cattle_Y_T01619;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48887386	48887801	.	-	2	ID=Cattle_Y_C02525;Parent=Cattle_Y_T01619;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_5;gene_id=Cattle_Y_G00914;transcript_id=Cattle_Y_T01619;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48887898	48887913	.	-	0	ID=Cattle_Y_C02526;Parent=Cattle_Y_T01619;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_5;start_range=.,9192022;gene_id=Cattle_Y_G00914;transcript_id=Cattle_Y_T01619;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48893178	48895312	.	-	.	ID=Cattle_Y_G00915;Dbxref=GeneID:132344573;Name=LOC132344573;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344573;gene_biotype=protein_coding;partial=true;start_range=.,9192022;gene_id=Cattle_Y_G00915;source_id=gene-LOC132344573
haplotype2-0000357	CAT	mRNA	48893178	48895312	.	-	.	ID=Cattle_Y_T01620;Parent=Cattle_Y_G00915;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;Name=XM_059884238.1;gbkey=mRNA;gene=LOC132344573;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9192022;transcript_id=Cattle_Y_T01620;gene_id=Cattle_Y_G00915;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884238.1
haplotype2-0000357	CAT	exon	48893178	48893255	.	-	.	ID=Cattle_Y_E02920;Parent=Cattle_Y_T01620;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01620;gene_id=Cattle_Y_G00915;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-6
haplotype2-0000357	CAT	exon	48893372	48893517	.	-	.	ID=Cattle_Y_E02921;Parent=Cattle_Y_T01620;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01620;gene_id=Cattle_Y_G00915;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-5
haplotype2-0000357	CAT	exon	48893613	48893724	.	-	.	ID=Cattle_Y_E02922;Parent=Cattle_Y_T01620;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01620;gene_id=Cattle_Y_G00915;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-4
haplotype2-0000357	CAT	exon	48893908	48893985	.	-	.	ID=Cattle_Y_E02923;Parent=Cattle_Y_T01620;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01620;gene_id=Cattle_Y_G00915;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-3
haplotype2-0000357	CAT	exon	48894785	48895200	.	-	.	ID=Cattle_Y_E02924;Parent=Cattle_Y_T01620;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01620;gene_id=Cattle_Y_G00915;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-2
haplotype2-0000357	CAT	exon	48895297	48895312	.	-	.	ID=Cattle_Y_E02925;Parent=Cattle_Y_T01620;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9192022;transcript_id=Cattle_Y_T01620;gene_id=Cattle_Y_G00915;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-1
haplotype2-0000357	CAT	CDS	48893178	48893255	.	-	0	ID=Cattle_Y_C02527;Parent=Cattle_Y_T01620;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_1;gene_id=Cattle_Y_G00915;transcript_id=Cattle_Y_T01620;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48893372	48893517	.	-	2	ID=Cattle_Y_C02528;Parent=Cattle_Y_T01620;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_1;gene_id=Cattle_Y_G00915;transcript_id=Cattle_Y_T01620;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48893613	48893724	.	-	0	ID=Cattle_Y_C02529;Parent=Cattle_Y_T01620;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_1;gene_id=Cattle_Y_G00915;transcript_id=Cattle_Y_T01620;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48893908	48893985	.	-	0	ID=Cattle_Y_C02530;Parent=Cattle_Y_T01620;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_1;gene_id=Cattle_Y_G00915;transcript_id=Cattle_Y_T01620;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48894785	48895200	.	-	2	ID=Cattle_Y_C02531;Parent=Cattle_Y_T01620;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_1;gene_id=Cattle_Y_G00915;transcript_id=Cattle_Y_T01620;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48895297	48895312	.	-	0	ID=Cattle_Y_C02532;Parent=Cattle_Y_T01620;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_1;start_range=.,9192022;gene_id=Cattle_Y_G00915;transcript_id=Cattle_Y_T01620;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48900576	48902710	.	-	.	ID=Cattle_Y_G00916;Dbxref=GeneID:132344573;Name=LOC132344573;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344573;gene_biotype=protein_coding;partial=true;start_range=.,9192022;gene_id=Cattle_Y_G00916;source_id=gene-LOC132344573
haplotype2-0000357	CAT	mRNA	48900576	48902710	.	-	.	ID=Cattle_Y_T01621;Parent=Cattle_Y_G00916;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;Name=XM_059884238.1;gbkey=mRNA;gene=LOC132344573;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9192022;transcript_id=Cattle_Y_T01621;gene_id=Cattle_Y_G00916;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884238.1
haplotype2-0000357	CAT	exon	48900576	48900653	.	-	.	ID=Cattle_Y_E02926;Parent=Cattle_Y_T01621;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01621;gene_id=Cattle_Y_G00916;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-6
haplotype2-0000357	CAT	exon	48900770	48900915	.	-	.	ID=Cattle_Y_E02927;Parent=Cattle_Y_T01621;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01621;gene_id=Cattle_Y_G00916;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-5
haplotype2-0000357	CAT	exon	48901011	48901122	.	-	.	ID=Cattle_Y_E02928;Parent=Cattle_Y_T01621;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01621;gene_id=Cattle_Y_G00916;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-4
haplotype2-0000357	CAT	exon	48901306	48901383	.	-	.	ID=Cattle_Y_E02929;Parent=Cattle_Y_T01621;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01621;gene_id=Cattle_Y_G00916;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-3
haplotype2-0000357	CAT	exon	48902183	48902598	.	-	.	ID=Cattle_Y_E02930;Parent=Cattle_Y_T01621;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01621;gene_id=Cattle_Y_G00916;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-2
haplotype2-0000357	CAT	exon	48902695	48902710	.	-	.	ID=Cattle_Y_E02931;Parent=Cattle_Y_T01621;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9192022;transcript_id=Cattle_Y_T01621;gene_id=Cattle_Y_G00916;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-1
haplotype2-0000357	CAT	CDS	48900576	48900653	.	-	0	ID=Cattle_Y_C02533;Parent=Cattle_Y_T01621;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1;gene_id=Cattle_Y_G00916;transcript_id=Cattle_Y_T01621;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48900770	48900915	.	-	2	ID=Cattle_Y_C02534;Parent=Cattle_Y_T01621;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1;gene_id=Cattle_Y_G00916;transcript_id=Cattle_Y_T01621;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48901011	48901122	.	-	0	ID=Cattle_Y_C02535;Parent=Cattle_Y_T01621;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1;gene_id=Cattle_Y_G00916;transcript_id=Cattle_Y_T01621;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48901306	48901383	.	-	0	ID=Cattle_Y_C02536;Parent=Cattle_Y_T01621;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1;gene_id=Cattle_Y_G00916;transcript_id=Cattle_Y_T01621;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48902183	48902598	.	-	2	ID=Cattle_Y_C02537;Parent=Cattle_Y_T01621;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1;gene_id=Cattle_Y_G00916;transcript_id=Cattle_Y_T01621;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48902695	48902710	.	-	0	ID=Cattle_Y_C02538;Parent=Cattle_Y_T01621;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1;start_range=.,9192022;gene_id=Cattle_Y_G00916;transcript_id=Cattle_Y_T01621;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48907009	48910195	.	-	.	ID=Cattle_Y_G00917;Dbxref=BGD:BT19054,GeneID:281554;Name=TSPY;description=testis specific protein%2C Y-linked 1;gbkey=Gene;gene=TSPY;gene_biotype=protein_coding;gene_synonym=TSPY-M1,TSPY1;gene_id=Cattle_Y_G00917;source_id=gene-TSPY
haplotype2-0000357	CAT	mRNA	48907009	48910195	.	-	.	ID=Cattle_Y_T01622;Parent=Cattle_Y_G00917;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Name=NM_001244608.1;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein%2C Y-linked 1;transcript_id=Cattle_Y_T01622;gene_id=Cattle_Y_G00917;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001244608.1
haplotype2-0000357	CAT	exon	48907009	48907224	.	-	.	ID=Cattle_Y_E02932;Parent=Cattle_Y_T01622;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01622;gene_id=Cattle_Y_G00917;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-7
haplotype2-0000357	CAT	exon	48907943	48908050	.	-	.	ID=Cattle_Y_E02933;Parent=Cattle_Y_T01622;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01622;gene_id=Cattle_Y_G00917;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-6
haplotype2-0000357	CAT	exon	48908167	48908312	.	-	.	ID=Cattle_Y_E02934;Parent=Cattle_Y_T01622;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01622;gene_id=Cattle_Y_G00917;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-5
haplotype2-0000357	CAT	exon	48908408	48908519	.	-	.	ID=Cattle_Y_E02935;Parent=Cattle_Y_T01622;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01622;gene_id=Cattle_Y_G00917;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-4
haplotype2-0000357	CAT	exon	48908703	48908780	.	-	.	ID=Cattle_Y_E02936;Parent=Cattle_Y_T01622;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01622;gene_id=Cattle_Y_G00917;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-3
haplotype2-0000357	CAT	exon	48909560	48909975	.	-	.	ID=Cattle_Y_E02937;Parent=Cattle_Y_T01622;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01622;gene_id=Cattle_Y_G00917;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-2
haplotype2-0000357	CAT	exon	48910072	48910195	.	-	.	ID=Cattle_Y_E02938;Parent=Cattle_Y_T01622;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01622;gene_id=Cattle_Y_G00917;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-1
haplotype2-0000357	CAT	CDS	48907973	48908050	.	-	0	ID=Cattle_Y_C02539;Parent=Cattle_Y_T01622;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_10;gene_id=Cattle_Y_G00917;transcript_id=Cattle_Y_T01622;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48908167	48908312	.	-	2	ID=Cattle_Y_C02540;Parent=Cattle_Y_T01622;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_10;gene_id=Cattle_Y_G00917;transcript_id=Cattle_Y_T01622;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48908408	48908519	.	-	0	ID=Cattle_Y_C02541;Parent=Cattle_Y_T01622;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_10;gene_id=Cattle_Y_G00917;transcript_id=Cattle_Y_T01622;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48908703	48908780	.	-	0	ID=Cattle_Y_C02542;Parent=Cattle_Y_T01622;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_10;gene_id=Cattle_Y_G00917;transcript_id=Cattle_Y_T01622;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48909560	48909975	.	-	2	ID=Cattle_Y_C02543;Parent=Cattle_Y_T01622;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_10;gene_id=Cattle_Y_G00917;transcript_id=Cattle_Y_T01622;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48910072	48910195	.	-	0	ID=Cattle_Y_C02544;Parent=Cattle_Y_T01622;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_10;gene_id=Cattle_Y_G00917;transcript_id=Cattle_Y_T01622;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48915489	48917709	.	-	.	ID=Cattle_Y_G00918;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00918;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	48915489	48917709	.	-	.	ID=Cattle_Y_T01623;Parent=Cattle_Y_G00918;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01623;gene_id=Cattle_Y_G00918;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	48915489	48915566	.	-	.	ID=Cattle_Y_E02939;Parent=Cattle_Y_T01623;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01623;gene_id=Cattle_Y_G00918;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	48915683	48915828	.	-	.	ID=Cattle_Y_E02940;Parent=Cattle_Y_T01623;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01623;gene_id=Cattle_Y_G00918;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	48915924	48916035	.	-	.	ID=Cattle_Y_E02941;Parent=Cattle_Y_T01623;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01623;gene_id=Cattle_Y_G00918;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	48916219	48916296	.	-	.	ID=Cattle_Y_E02942;Parent=Cattle_Y_T01623;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01623;gene_id=Cattle_Y_G00918;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	48917074	48917489	.	-	.	ID=Cattle_Y_E02943;Parent=Cattle_Y_T01623;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01623;gene_id=Cattle_Y_G00918;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	48917586	48917709	.	-	.	ID=Cattle_Y_E02944;Parent=Cattle_Y_T01623;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01623;gene_id=Cattle_Y_G00918;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	48915489	48915566	.	-	0	ID=Cattle_Y_C02545;Parent=Cattle_Y_T01623;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_1;gene_id=Cattle_Y_G00918;transcript_id=Cattle_Y_T01623;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48915683	48915828	.	-	2	ID=Cattle_Y_C02546;Parent=Cattle_Y_T01623;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_1;gene_id=Cattle_Y_G00918;transcript_id=Cattle_Y_T01623;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48915924	48916035	.	-	0	ID=Cattle_Y_C02547;Parent=Cattle_Y_T01623;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_1;gene_id=Cattle_Y_G00918;transcript_id=Cattle_Y_T01623;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48916219	48916296	.	-	0	ID=Cattle_Y_C02548;Parent=Cattle_Y_T01623;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_1;gene_id=Cattle_Y_G00918;transcript_id=Cattle_Y_T01623;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48917074	48917489	.	-	2	ID=Cattle_Y_C02549;Parent=Cattle_Y_T01623;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_1;gene_id=Cattle_Y_G00918;transcript_id=Cattle_Y_T01623;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48917586	48917709	.	-	0	ID=Cattle_Y_C02550;Parent=Cattle_Y_T01623;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_1;gene_id=Cattle_Y_G00918;transcript_id=Cattle_Y_T01623;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48923001	48925221	.	-	.	ID=Cattle_Y_G00919;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00919;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	48923001	48925221	.	-	.	ID=Cattle_Y_T01624;Parent=Cattle_Y_G00919;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01624;gene_id=Cattle_Y_G00919;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	48923001	48923078	.	-	.	ID=Cattle_Y_E02945;Parent=Cattle_Y_T01624;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01624;gene_id=Cattle_Y_G00919;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	48923195	48923340	.	-	.	ID=Cattle_Y_E02946;Parent=Cattle_Y_T01624;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01624;gene_id=Cattle_Y_G00919;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	48923436	48923547	.	-	.	ID=Cattle_Y_E02947;Parent=Cattle_Y_T01624;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01624;gene_id=Cattle_Y_G00919;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	48923731	48923808	.	-	.	ID=Cattle_Y_E02948;Parent=Cattle_Y_T01624;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01624;gene_id=Cattle_Y_G00919;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	48924586	48925001	.	-	.	ID=Cattle_Y_E02949;Parent=Cattle_Y_T01624;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01624;gene_id=Cattle_Y_G00919;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	48925098	48925221	.	-	.	ID=Cattle_Y_E02950;Parent=Cattle_Y_T01624;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01624;gene_id=Cattle_Y_G00919;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	48923001	48923078	.	-	0	ID=Cattle_Y_C02551;Parent=Cattle_Y_T01624;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_7;gene_id=Cattle_Y_G00919;transcript_id=Cattle_Y_T01624;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48923195	48923340	.	-	2	ID=Cattle_Y_C02552;Parent=Cattle_Y_T01624;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_7;gene_id=Cattle_Y_G00919;transcript_id=Cattle_Y_T01624;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48923436	48923547	.	-	0	ID=Cattle_Y_C02553;Parent=Cattle_Y_T01624;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_7;gene_id=Cattle_Y_G00919;transcript_id=Cattle_Y_T01624;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48923731	48923808	.	-	0	ID=Cattle_Y_C02554;Parent=Cattle_Y_T01624;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_7;gene_id=Cattle_Y_G00919;transcript_id=Cattle_Y_T01624;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48924586	48925001	.	-	2	ID=Cattle_Y_C02555;Parent=Cattle_Y_T01624;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_7;gene_id=Cattle_Y_G00919;transcript_id=Cattle_Y_T01624;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48925098	48925221	.	-	0	ID=Cattle_Y_C02556;Parent=Cattle_Y_T01624;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_7;gene_id=Cattle_Y_G00919;transcript_id=Cattle_Y_T01624;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48929556	48932741	.	-	.	ID=Cattle_Y_G00920;Dbxref=BGD:BT19054,GeneID:281554;Name=TSPY;description=testis specific protein%2C Y-linked 1;gbkey=Gene;gene=TSPY;gene_biotype=protein_coding;gene_synonym=TSPY-M1,TSPY1;gene_id=Cattle_Y_G00920;source_id=gene-TSPY
haplotype2-0000357	CAT	mRNA	48929556	48932741	.	-	.	ID=Cattle_Y_T01625;Parent=Cattle_Y_G00920;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Name=NM_001244608.1;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein%2C Y-linked 1;transcript_id=Cattle_Y_T01625;gene_id=Cattle_Y_G00920;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001244608.1
haplotype2-0000357	CAT	exon	48929556	48929771	.	-	.	ID=Cattle_Y_E02951;Parent=Cattle_Y_T01625;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01625;gene_id=Cattle_Y_G00920;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-7
haplotype2-0000357	CAT	exon	48930491	48930598	.	-	.	ID=Cattle_Y_E02952;Parent=Cattle_Y_T01625;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01625;gene_id=Cattle_Y_G00920;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-6
haplotype2-0000357	CAT	exon	48930715	48930860	.	-	.	ID=Cattle_Y_E02953;Parent=Cattle_Y_T01625;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01625;gene_id=Cattle_Y_G00920;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-5
haplotype2-0000357	CAT	exon	48930956	48931067	.	-	.	ID=Cattle_Y_E02954;Parent=Cattle_Y_T01625;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01625;gene_id=Cattle_Y_G00920;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-4
haplotype2-0000357	CAT	exon	48931251	48931328	.	-	.	ID=Cattle_Y_E02955;Parent=Cattle_Y_T01625;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01625;gene_id=Cattle_Y_G00920;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-3
haplotype2-0000357	CAT	exon	48932106	48932521	.	-	.	ID=Cattle_Y_E02956;Parent=Cattle_Y_T01625;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01625;gene_id=Cattle_Y_G00920;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-2
haplotype2-0000357	CAT	exon	48932618	48932741	.	-	.	ID=Cattle_Y_E02957;Parent=Cattle_Y_T01625;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01625;gene_id=Cattle_Y_G00920;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-1
haplotype2-0000357	CAT	CDS	48930521	48930598	.	-	0	ID=Cattle_Y_C02557;Parent=Cattle_Y_T01625;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_8;gene_id=Cattle_Y_G00920;transcript_id=Cattle_Y_T01625;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48930715	48930860	.	-	2	ID=Cattle_Y_C02558;Parent=Cattle_Y_T01625;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_8;gene_id=Cattle_Y_G00920;transcript_id=Cattle_Y_T01625;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48930956	48931067	.	-	0	ID=Cattle_Y_C02559;Parent=Cattle_Y_T01625;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_8;gene_id=Cattle_Y_G00920;transcript_id=Cattle_Y_T01625;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48931251	48931328	.	-	0	ID=Cattle_Y_C02560;Parent=Cattle_Y_T01625;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_8;gene_id=Cattle_Y_G00920;transcript_id=Cattle_Y_T01625;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48932106	48932521	.	-	2	ID=Cattle_Y_C02561;Parent=Cattle_Y_T01625;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_8;gene_id=Cattle_Y_G00920;transcript_id=Cattle_Y_T01625;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48932618	48932741	.	-	0	ID=Cattle_Y_C02562;Parent=Cattle_Y_T01625;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_8;gene_id=Cattle_Y_G00920;transcript_id=Cattle_Y_T01625;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48937076	48940261	.	-	.	ID=Cattle_Y_G00921;Dbxref=BGD:BT19054,GeneID:281554;Name=TSPY;description=testis specific protein%2C Y-linked 1;gbkey=Gene;gene=TSPY;gene_biotype=protein_coding;gene_synonym=TSPY-M1,TSPY1;gene_id=Cattle_Y_G00921;source_id=gene-TSPY
haplotype2-0000357	CAT	mRNA	48937076	48940261	.	-	.	ID=Cattle_Y_T01626;Parent=Cattle_Y_G00921;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Name=NM_001244608.1;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein%2C Y-linked 1;transcript_id=Cattle_Y_T01626;gene_id=Cattle_Y_G00921;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001244608.1
haplotype2-0000357	CAT	exon	48937076	48937291	.	-	.	ID=Cattle_Y_E02958;Parent=Cattle_Y_T01626;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01626;gene_id=Cattle_Y_G00921;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-7
haplotype2-0000357	CAT	exon	48938011	48938118	.	-	.	ID=Cattle_Y_E02959;Parent=Cattle_Y_T01626;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01626;gene_id=Cattle_Y_G00921;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-6
haplotype2-0000357	CAT	exon	48938235	48938380	.	-	.	ID=Cattle_Y_E02960;Parent=Cattle_Y_T01626;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01626;gene_id=Cattle_Y_G00921;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-5
haplotype2-0000357	CAT	exon	48938476	48938587	.	-	.	ID=Cattle_Y_E02961;Parent=Cattle_Y_T01626;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01626;gene_id=Cattle_Y_G00921;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-4
haplotype2-0000357	CAT	exon	48938771	48938848	.	-	.	ID=Cattle_Y_E02962;Parent=Cattle_Y_T01626;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01626;gene_id=Cattle_Y_G00921;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-3
haplotype2-0000357	CAT	exon	48939626	48940041	.	-	.	ID=Cattle_Y_E02963;Parent=Cattle_Y_T01626;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01626;gene_id=Cattle_Y_G00921;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-2
haplotype2-0000357	CAT	exon	48940138	48940261	.	-	.	ID=Cattle_Y_E02964;Parent=Cattle_Y_T01626;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01626;gene_id=Cattle_Y_G00921;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-1
haplotype2-0000357	CAT	CDS	48938041	48938118	.	-	0	ID=Cattle_Y_C02563;Parent=Cattle_Y_T01626;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_9;gene_id=Cattle_Y_G00921;transcript_id=Cattle_Y_T01626;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48938235	48938380	.	-	2	ID=Cattle_Y_C02564;Parent=Cattle_Y_T01626;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_9;gene_id=Cattle_Y_G00921;transcript_id=Cattle_Y_T01626;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48938476	48938587	.	-	0	ID=Cattle_Y_C02565;Parent=Cattle_Y_T01626;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_9;gene_id=Cattle_Y_G00921;transcript_id=Cattle_Y_T01626;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48938771	48938848	.	-	0	ID=Cattle_Y_C02566;Parent=Cattle_Y_T01626;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_9;gene_id=Cattle_Y_G00921;transcript_id=Cattle_Y_T01626;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48939626	48940041	.	-	2	ID=Cattle_Y_C02567;Parent=Cattle_Y_T01626;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_9;gene_id=Cattle_Y_G00921;transcript_id=Cattle_Y_T01626;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48940138	48940261	.	-	0	ID=Cattle_Y_C02568;Parent=Cattle_Y_T01626;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_9;gene_id=Cattle_Y_G00921;transcript_id=Cattle_Y_T01626;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48945557	48947679	.	-	.	ID=Cattle_Y_G00922;Dbxref=GeneID:132344573;Name=LOC132344573;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344573;gene_biotype=protein_coding;partial=true;start_range=.,9192022;gene_id=Cattle_Y_G00922;source_id=gene-LOC132344573
haplotype2-0000357	CAT	mRNA	48945557	48947679	.	-	.	ID=Cattle_Y_T01627;Parent=Cattle_Y_G00922;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;Name=XM_059884238.1;gbkey=mRNA;gene=LOC132344573;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9192022;transcript_id=Cattle_Y_T01627;gene_id=Cattle_Y_G00922;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884238.1
haplotype2-0000357	CAT	exon	48945557	48945634	.	-	.	ID=Cattle_Y_E02965;Parent=Cattle_Y_T01627;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01627;gene_id=Cattle_Y_G00922;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-6
haplotype2-0000357	CAT	exon	48945751	48945896	.	-	.	ID=Cattle_Y_E02966;Parent=Cattle_Y_T01627;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01627;gene_id=Cattle_Y_G00922;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-5
haplotype2-0000357	CAT	exon	48945992	48946103	.	-	.	ID=Cattle_Y_E02967;Parent=Cattle_Y_T01627;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01627;gene_id=Cattle_Y_G00922;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-4
haplotype2-0000357	CAT	exon	48946287	48946364	.	-	.	ID=Cattle_Y_E02968;Parent=Cattle_Y_T01627;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01627;gene_id=Cattle_Y_G00922;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-3
haplotype2-0000357	CAT	exon	48947152	48947567	.	-	.	ID=Cattle_Y_E02969;Parent=Cattle_Y_T01627;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01627;gene_id=Cattle_Y_G00922;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-2
haplotype2-0000357	CAT	exon	48947664	48947679	.	-	.	ID=Cattle_Y_E02970;Parent=Cattle_Y_T01627;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9192022;transcript_id=Cattle_Y_T01627;gene_id=Cattle_Y_G00922;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-1
haplotype2-0000357	CAT	CDS	48945557	48945634	.	-	0	ID=Cattle_Y_C02569;Parent=Cattle_Y_T01627;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_3;gene_id=Cattle_Y_G00922;transcript_id=Cattle_Y_T01627;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48945751	48945896	.	-	2	ID=Cattle_Y_C02570;Parent=Cattle_Y_T01627;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_3;gene_id=Cattle_Y_G00922;transcript_id=Cattle_Y_T01627;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48945992	48946103	.	-	0	ID=Cattle_Y_C02571;Parent=Cattle_Y_T01627;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_3;gene_id=Cattle_Y_G00922;transcript_id=Cattle_Y_T01627;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48946287	48946364	.	-	0	ID=Cattle_Y_C02572;Parent=Cattle_Y_T01627;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_3;gene_id=Cattle_Y_G00922;transcript_id=Cattle_Y_T01627;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48947152	48947567	.	-	2	ID=Cattle_Y_C02573;Parent=Cattle_Y_T01627;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_3;gene_id=Cattle_Y_G00922;transcript_id=Cattle_Y_T01627;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48947664	48947679	.	-	0	ID=Cattle_Y_C02574;Parent=Cattle_Y_T01627;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_3;start_range=.,9192022;gene_id=Cattle_Y_G00922;transcript_id=Cattle_Y_T01627;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48953083	48955322	.	-	.	ID=Cattle_Y_G00923;Dbxref=GeneID:132344581;Name=LOC132344581;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344581;gene_biotype=protein_coding;gene_id=Cattle_Y_G00923;source_id=gene-LOC132344581
haplotype2-0000357	CAT	mRNA	48953083	48955322	.	-	.	ID=Cattle_Y_T01628;Parent=Cattle_Y_G00923;Dbxref=GeneID:132344581,GenBank:XM_059884247.1;Name=XM_059884247.1;gbkey=mRNA;gene=LOC132344581;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01628;gene_id=Cattle_Y_G00923;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884247.1
haplotype2-0000357	CAT	exon	48953083	48953160	.	-	.	ID=Cattle_Y_E02971;Parent=Cattle_Y_T01628;Dbxref=GeneID:132344581,GenBank:XM_059884247.1;gbkey=mRNA;gene=LOC132344581;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01628;gene_id=Cattle_Y_G00923;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884247.1-6
haplotype2-0000357	CAT	exon	48953277	48953422	.	-	.	ID=Cattle_Y_E02972;Parent=Cattle_Y_T01628;Dbxref=GeneID:132344581,GenBank:XM_059884247.1;gbkey=mRNA;gene=LOC132344581;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01628;gene_id=Cattle_Y_G00923;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884247.1-5
haplotype2-0000357	CAT	exon	48953518	48953629	.	-	.	ID=Cattle_Y_E02973;Parent=Cattle_Y_T01628;Dbxref=GeneID:132344581,GenBank:XM_059884247.1;gbkey=mRNA;gene=LOC132344581;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01628;gene_id=Cattle_Y_G00923;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884247.1-4
haplotype2-0000357	CAT	exon	48953813	48953890	.	-	.	ID=Cattle_Y_E02974;Parent=Cattle_Y_T01628;Dbxref=GeneID:132344581,GenBank:XM_059884247.1;gbkey=mRNA;gene=LOC132344581;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01628;gene_id=Cattle_Y_G00923;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884247.1-3
haplotype2-0000357	CAT	exon	48954688	48955103	.	-	.	ID=Cattle_Y_E02975;Parent=Cattle_Y_T01628;Dbxref=GeneID:132344581,GenBank:XM_059884247.1;gbkey=mRNA;gene=LOC132344581;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01628;gene_id=Cattle_Y_G00923;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884247.1-2
haplotype2-0000357	CAT	exon	48955199	48955322	.	-	.	ID=Cattle_Y_E02976;Parent=Cattle_Y_T01628;Dbxref=GeneID:132344581,GenBank:XM_059884247.1;gbkey=mRNA;gene=LOC132344581;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01628;gene_id=Cattle_Y_G00923;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884247.1-1
haplotype2-0000357	CAT	CDS	48953083	48953160	.	-	0	ID=Cattle_Y_C02575;Parent=Cattle_Y_T01628;Dbxref=GeneID:132344581,GenBank:XP_059740230.1;Name=XP_059740230.1;gbkey=CDS;gene=LOC132344581;product=testis-specific Y-encoded protein 1;protein_id=XP_059740230.1;gene_id=Cattle_Y_G00923;transcript_id=Cattle_Y_T01628;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48953277	48953422	.	-	2	ID=Cattle_Y_C02576;Parent=Cattle_Y_T01628;Dbxref=GeneID:132344581,GenBank:XP_059740230.1;Name=XP_059740230.1;gbkey=CDS;gene=LOC132344581;product=testis-specific Y-encoded protein 1;protein_id=XP_059740230.1;gene_id=Cattle_Y_G00923;transcript_id=Cattle_Y_T01628;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48953518	48953629	.	-	0	ID=Cattle_Y_C02577;Parent=Cattle_Y_T01628;Dbxref=GeneID:132344581,GenBank:XP_059740230.1;Name=XP_059740230.1;gbkey=CDS;gene=LOC132344581;product=testis-specific Y-encoded protein 1;protein_id=XP_059740230.1;gene_id=Cattle_Y_G00923;transcript_id=Cattle_Y_T01628;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48953813	48953890	.	-	0	ID=Cattle_Y_C02578;Parent=Cattle_Y_T01628;Dbxref=GeneID:132344581,GenBank:XP_059740230.1;Name=XP_059740230.1;gbkey=CDS;gene=LOC132344581;product=testis-specific Y-encoded protein 1;protein_id=XP_059740230.1;gene_id=Cattle_Y_G00923;transcript_id=Cattle_Y_T01628;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48954688	48955103	.	-	2	ID=Cattle_Y_C02579;Parent=Cattle_Y_T01628;Dbxref=GeneID:132344581,GenBank:XP_059740230.1;Name=XP_059740230.1;gbkey=CDS;gene=LOC132344581;product=testis-specific Y-encoded protein 1;protein_id=XP_059740230.1;gene_id=Cattle_Y_G00923;transcript_id=Cattle_Y_T01628;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48955199	48955322	.	-	0	ID=Cattle_Y_C02580;Parent=Cattle_Y_T01628;Dbxref=GeneID:132344581,GenBank:XP_059740230.1;Name=XP_059740230.1;gbkey=CDS;gene=LOC132344581;product=testis-specific Y-encoded protein 1;protein_id=XP_059740230.1;gene_id=Cattle_Y_G00923;transcript_id=Cattle_Y_T01628;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48960478	48962717	.	-	.	ID=Cattle_Y_G00924;Dbxref=GeneID:132344584;Name=LOC132344584;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344584;gene_biotype=protein_coding;gene_id=Cattle_Y_G00924;source_id=gene-LOC132344584
haplotype2-0000357	CAT	mRNA	48960478	48962717	.	-	.	ID=Cattle_Y_T01629;Parent=Cattle_Y_G00924;Dbxref=GeneID:132344584,GenBank:XM_059884250.1;Name=XM_059884250.1;gbkey=mRNA;gene=LOC132344584;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01629;gene_id=Cattle_Y_G00924;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884250.1
haplotype2-0000357	CAT	exon	48960478	48960555	.	-	.	ID=Cattle_Y_E02977;Parent=Cattle_Y_T01629;Dbxref=GeneID:132344584,GenBank:XM_059884250.1;gbkey=mRNA;gene=LOC132344584;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01629;gene_id=Cattle_Y_G00924;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884250.1-6
haplotype2-0000357	CAT	exon	48960672	48960817	.	-	.	ID=Cattle_Y_E02978;Parent=Cattle_Y_T01629;Dbxref=GeneID:132344584,GenBank:XM_059884250.1;gbkey=mRNA;gene=LOC132344584;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01629;gene_id=Cattle_Y_G00924;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884250.1-6
haplotype2-0000357	CAT	exon	48960913	48961024	.	-	.	ID=Cattle_Y_E02979;Parent=Cattle_Y_T01629;Dbxref=GeneID:132344584,GenBank:XM_059884250.1;gbkey=mRNA;gene=LOC132344584;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01629;gene_id=Cattle_Y_G00924;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884250.1-6
haplotype2-0000357	CAT	exon	48961208	48961285	.	-	.	ID=Cattle_Y_E02980;Parent=Cattle_Y_T01629;Dbxref=GeneID:132344584,GenBank:XM_059884250.1;gbkey=mRNA;gene=LOC132344584;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01629;gene_id=Cattle_Y_G00924;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884250.1-6
haplotype2-0000357	CAT	exon	48962083	48962498	.	-	.	ID=Cattle_Y_E02981;Parent=Cattle_Y_T01629;Dbxref=GeneID:132344584,GenBank:XM_059884250.1;gbkey=mRNA;gene=LOC132344584;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01629;gene_id=Cattle_Y_G00924;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884250.1-6
haplotype2-0000357	CAT	exon	48962594	48962717	.	-	.	ID=Cattle_Y_E02982;Parent=Cattle_Y_T01629;Dbxref=GeneID:132344584,GenBank:XM_059884250.1;gbkey=mRNA;gene=LOC132344584;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01629;gene_id=Cattle_Y_G00924;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884250.1-1
haplotype2-0000357	CAT	CDS	48960478	48960555	.	-	0	ID=Cattle_Y_C02581;Parent=Cattle_Y_T01629;gene_id=Cattle_Y_G00924;transcript_id=Cattle_Y_T01629;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48960672	48960817	.	-	2	ID=Cattle_Y_C02582;Parent=Cattle_Y_T01629;gene_id=Cattle_Y_G00924;transcript_id=Cattle_Y_T01629;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48960913	48961024	.	-	0	ID=Cattle_Y_C02583;Parent=Cattle_Y_T01629;gene_id=Cattle_Y_G00924;transcript_id=Cattle_Y_T01629;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48961208	48961285	.	-	0	ID=Cattle_Y_C02584;Parent=Cattle_Y_T01629;gene_id=Cattle_Y_G00924;transcript_id=Cattle_Y_T01629;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48962083	48962498	.	-	2	ID=Cattle_Y_C02585;Parent=Cattle_Y_T01629;gene_id=Cattle_Y_G00924;transcript_id=Cattle_Y_T01629;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48962594	48962717	.	-	0	ID=Cattle_Y_C02586;Parent=Cattle_Y_T01629;gene_id=Cattle_Y_G00924;transcript_id=Cattle_Y_T01629;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48967875	48970097	.	-	.	ID=Cattle_Y_G00925;Dbxref=GeneID:132344572;Name=LOC132344572;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344572;gene_biotype=protein_coding;gene_id=Cattle_Y_G00925;source_id=gene-LOC132344572
haplotype2-0000357	CAT	mRNA	48967875	48970097	.	-	.	ID=Cattle_Y_T01630;Parent=Cattle_Y_G00925;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;Name=XM_059884237.1;gbkey=mRNA;gene=LOC132344572;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 7%25 coverage of the annotated genomic feature by RNAseq alignments;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01630;gene_id=Cattle_Y_G00925;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884237.1
haplotype2-0000357	CAT	exon	48967875	48967952	.	-	.	ID=Cattle_Y_E02983;Parent=Cattle_Y_T01630;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01630;gene_id=Cattle_Y_G00925;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-6
haplotype2-0000357	CAT	exon	48968069	48968214	.	-	.	ID=Cattle_Y_E02984;Parent=Cattle_Y_T01630;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01630;gene_id=Cattle_Y_G00925;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-5
haplotype2-0000357	CAT	exon	48968310	48968421	.	-	.	ID=Cattle_Y_E02985;Parent=Cattle_Y_T01630;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01630;gene_id=Cattle_Y_G00925;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-4
haplotype2-0000357	CAT	exon	48968605	48968682	.	-	.	ID=Cattle_Y_E02986;Parent=Cattle_Y_T01630;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01630;gene_id=Cattle_Y_G00925;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-3
haplotype2-0000357	CAT	exon	48969462	48969877	.	-	.	ID=Cattle_Y_E02987;Parent=Cattle_Y_T01630;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01630;gene_id=Cattle_Y_G00925;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-2
haplotype2-0000357	CAT	exon	48969974	48970097	.	-	.	ID=Cattle_Y_E02988;Parent=Cattle_Y_T01630;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01630;gene_id=Cattle_Y_G00925;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-1
haplotype2-0000357	CAT	CDS	48967875	48967952	.	-	0	ID=Cattle_Y_C02587;Parent=Cattle_Y_T01630;Dbxref=GeneID:132344572,GenBank:XP_059740220.1;Name=XP_059740220.1;gbkey=CDS;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740220.1_3;gene_id=Cattle_Y_G00925;transcript_id=Cattle_Y_T01630;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48968069	48968214	.	-	2	ID=Cattle_Y_C02588;Parent=Cattle_Y_T01630;Dbxref=GeneID:132344572,GenBank:XP_059740220.1;Name=XP_059740220.1;gbkey=CDS;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740220.1_3;gene_id=Cattle_Y_G00925;transcript_id=Cattle_Y_T01630;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48968310	48968421	.	-	0	ID=Cattle_Y_C02589;Parent=Cattle_Y_T01630;Dbxref=GeneID:132344572,GenBank:XP_059740220.1;Name=XP_059740220.1;gbkey=CDS;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740220.1_3;gene_id=Cattle_Y_G00925;transcript_id=Cattle_Y_T01630;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48968605	48968682	.	-	0	ID=Cattle_Y_C02590;Parent=Cattle_Y_T01630;Dbxref=GeneID:132344572,GenBank:XP_059740220.1;Name=XP_059740220.1;gbkey=CDS;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740220.1_3;gene_id=Cattle_Y_G00925;transcript_id=Cattle_Y_T01630;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48969462	48969877	.	-	2	ID=Cattle_Y_C02591;Parent=Cattle_Y_T01630;Dbxref=GeneID:132344572,GenBank:XP_059740220.1;Name=XP_059740220.1;gbkey=CDS;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740220.1_3;gene_id=Cattle_Y_G00925;transcript_id=Cattle_Y_T01630;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48969974	48970097	.	-	0	ID=Cattle_Y_C02592;Parent=Cattle_Y_T01630;Dbxref=GeneID:132344572,GenBank:XP_059740220.1;Name=XP_059740220.1;gbkey=CDS;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740220.1_3;gene_id=Cattle_Y_G00925;transcript_id=Cattle_Y_T01630;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48975255	48977367	.	-	.	ID=Cattle_Y_G00926;Dbxref=GeneID:132344574;Name=LOC132344574;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344574;gene_biotype=protein_coding;partial=true;start_range=.,9199421;gene_id=Cattle_Y_G00926;source_id=gene-LOC132344574
haplotype2-0000357	CAT	mRNA	48975255	48977367	.	-	.	ID=Cattle_Y_T01631;Parent=Cattle_Y_G00926;Dbxref=GeneID:132344574,GenBank:XM_059884239.1;Name=XM_059884239.1;gbkey=mRNA;gene=LOC132344574;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9199421;transcript_id=Cattle_Y_T01631;gene_id=Cattle_Y_G00926;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884239.1
haplotype2-0000357	CAT	exon	48975255	48975332	.	-	.	ID=Cattle_Y_E02989;Parent=Cattle_Y_T01631;Dbxref=GeneID:132344574,GenBank:XM_059884239.1;gbkey=mRNA;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01631;gene_id=Cattle_Y_G00926;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884239.1-6
haplotype2-0000357	CAT	exon	48975449	48975594	.	-	.	ID=Cattle_Y_E02990;Parent=Cattle_Y_T01631;Dbxref=GeneID:132344574,GenBank:XM_059884239.1;gbkey=mRNA;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01631;gene_id=Cattle_Y_G00926;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884239.1-5
haplotype2-0000357	CAT	exon	48975690	48975801	.	-	.	ID=Cattle_Y_E02991;Parent=Cattle_Y_T01631;Dbxref=GeneID:132344574,GenBank:XM_059884239.1;gbkey=mRNA;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01631;gene_id=Cattle_Y_G00926;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884239.1-4
haplotype2-0000357	CAT	exon	48975985	48976062	.	-	.	ID=Cattle_Y_E02992;Parent=Cattle_Y_T01631;Dbxref=GeneID:132344574,GenBank:XM_059884239.1;gbkey=mRNA;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01631;gene_id=Cattle_Y_G00926;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884239.1-3
haplotype2-0000357	CAT	exon	48976840	48977255	.	-	.	ID=Cattle_Y_E02993;Parent=Cattle_Y_T01631;Dbxref=GeneID:132344574,GenBank:XM_059884239.1;gbkey=mRNA;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01631;gene_id=Cattle_Y_G00926;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884239.1-2
haplotype2-0000357	CAT	exon	48977352	48977367	.	-	.	ID=Cattle_Y_E02994;Parent=Cattle_Y_T01631;Dbxref=GeneID:132344574,GenBank:XM_059884239.1;gbkey=mRNA;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9199421;transcript_id=Cattle_Y_T01631;gene_id=Cattle_Y_G00926;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884239.1-1
haplotype2-0000357	CAT	CDS	48975255	48975332	.	-	0	ID=Cattle_Y_C02593;Parent=Cattle_Y_T01631;Dbxref=GeneID:132344574,GenBank:XP_059740222.1;Name=XP_059740222.1;gbkey=CDS;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740222.1_1;gene_id=Cattle_Y_G00926;transcript_id=Cattle_Y_T01631;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48975449	48975594	.	-	2	ID=Cattle_Y_C02594;Parent=Cattle_Y_T01631;Dbxref=GeneID:132344574,GenBank:XP_059740222.1;Name=XP_059740222.1;gbkey=CDS;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740222.1_1;gene_id=Cattle_Y_G00926;transcript_id=Cattle_Y_T01631;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48975690	48975801	.	-	0	ID=Cattle_Y_C02595;Parent=Cattle_Y_T01631;Dbxref=GeneID:132344574,GenBank:XP_059740222.1;Name=XP_059740222.1;gbkey=CDS;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740222.1_1;gene_id=Cattle_Y_G00926;transcript_id=Cattle_Y_T01631;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48975985	48976062	.	-	0	ID=Cattle_Y_C02596;Parent=Cattle_Y_T01631;Dbxref=GeneID:132344574,GenBank:XP_059740222.1;Name=XP_059740222.1;gbkey=CDS;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740222.1_1;gene_id=Cattle_Y_G00926;transcript_id=Cattle_Y_T01631;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48976840	48977255	.	-	2	ID=Cattle_Y_C02597;Parent=Cattle_Y_T01631;Dbxref=GeneID:132344574,GenBank:XP_059740222.1;Name=XP_059740222.1;gbkey=CDS;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740222.1_1;gene_id=Cattle_Y_G00926;transcript_id=Cattle_Y_T01631;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48977352	48977367	.	-	0	ID=Cattle_Y_C02598;Parent=Cattle_Y_T01631;Dbxref=GeneID:132344574,GenBank:XP_059740222.1;Name=XP_059740222.1;gbkey=CDS;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740222.1_1;start_range=.,9199421;gene_id=Cattle_Y_G00926;transcript_id=Cattle_Y_T01631;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48982631	48984743	.	-	.	ID=Cattle_Y_G00927;Dbxref=GeneID:132344573;Name=LOC132344573;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344573;gene_biotype=protein_coding;partial=true;start_range=.,9192022;gene_id=Cattle_Y_G00927;source_id=gene-LOC132344573
haplotype2-0000357	CAT	mRNA	48982631	48984743	.	-	.	ID=Cattle_Y_T01632;Parent=Cattle_Y_G00927;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;Name=XM_059884238.1;gbkey=mRNA;gene=LOC132344573;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9192022;transcript_id=Cattle_Y_T01632;gene_id=Cattle_Y_G00927;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884238.1
haplotype2-0000357	CAT	exon	48982631	48982708	.	-	.	ID=Cattle_Y_E02995;Parent=Cattle_Y_T01632;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01632;gene_id=Cattle_Y_G00927;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-6
haplotype2-0000357	CAT	exon	48982825	48982970	.	-	.	ID=Cattle_Y_E02996;Parent=Cattle_Y_T01632;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01632;gene_id=Cattle_Y_G00927;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-5
haplotype2-0000357	CAT	exon	48983066	48983177	.	-	.	ID=Cattle_Y_E02997;Parent=Cattle_Y_T01632;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01632;gene_id=Cattle_Y_G00927;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-4
haplotype2-0000357	CAT	exon	48983361	48983438	.	-	.	ID=Cattle_Y_E02998;Parent=Cattle_Y_T01632;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01632;gene_id=Cattle_Y_G00927;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-3
haplotype2-0000357	CAT	exon	48984216	48984631	.	-	.	ID=Cattle_Y_E02999;Parent=Cattle_Y_T01632;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01632;gene_id=Cattle_Y_G00927;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-2
haplotype2-0000357	CAT	exon	48984728	48984743	.	-	.	ID=Cattle_Y_E03000;Parent=Cattle_Y_T01632;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;gbkey=mRNA;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9192022;transcript_id=Cattle_Y_T01632;gene_id=Cattle_Y_G00927;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884238.1-1
haplotype2-0000357	CAT	CDS	48982631	48982708	.	-	0	ID=Cattle_Y_C02599;Parent=Cattle_Y_T01632;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_4;gene_id=Cattle_Y_G00927;transcript_id=Cattle_Y_T01632;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48982825	48982970	.	-	2	ID=Cattle_Y_C02600;Parent=Cattle_Y_T01632;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_4;gene_id=Cattle_Y_G00927;transcript_id=Cattle_Y_T01632;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48983066	48983177	.	-	0	ID=Cattle_Y_C02601;Parent=Cattle_Y_T01632;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_4;gene_id=Cattle_Y_G00927;transcript_id=Cattle_Y_T01632;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48983361	48983438	.	-	0	ID=Cattle_Y_C02602;Parent=Cattle_Y_T01632;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_4;gene_id=Cattle_Y_G00927;transcript_id=Cattle_Y_T01632;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48984216	48984631	.	-	2	ID=Cattle_Y_C02603;Parent=Cattle_Y_T01632;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_4;gene_id=Cattle_Y_G00927;transcript_id=Cattle_Y_T01632;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48984728	48984743	.	-	0	ID=Cattle_Y_C02604;Parent=Cattle_Y_T01632;Dbxref=GeneID:132344573,GenBank:XP_059740221.1;Name=XP_059740221.1;gbkey=CDS;gene=LOC132344573;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740221.1_4;start_range=.,9192022;gene_id=Cattle_Y_G00927;transcript_id=Cattle_Y_T01632;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48990008	48992250	.	-	.	ID=Cattle_Y_G00928;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00928;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	48990008	48992250	.	-	.	ID=Cattle_Y_T01633;Parent=Cattle_Y_G00928;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01633;gene_id=Cattle_Y_G00928;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	48990008	48990085	.	-	.	ID=Cattle_Y_E03001;Parent=Cattle_Y_T01633;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01633;gene_id=Cattle_Y_G00928;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	48990202	48990347	.	-	.	ID=Cattle_Y_E03002;Parent=Cattle_Y_T01633;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01633;gene_id=Cattle_Y_G00928;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	48990443	48990554	.	-	.	ID=Cattle_Y_E03003;Parent=Cattle_Y_T01633;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01633;gene_id=Cattle_Y_G00928;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	48990738	48990815	.	-	.	ID=Cattle_Y_E03004;Parent=Cattle_Y_T01633;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01633;gene_id=Cattle_Y_G00928;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	48991615	48992030	.	-	.	ID=Cattle_Y_E03005;Parent=Cattle_Y_T01633;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01633;gene_id=Cattle_Y_G00928;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	48992127	48992250	.	-	.	ID=Cattle_Y_E03006;Parent=Cattle_Y_T01633;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01633;gene_id=Cattle_Y_G00928;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	48990008	48990085	.	-	0	ID=Cattle_Y_C02605;Parent=Cattle_Y_T01633;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_8;gene_id=Cattle_Y_G00928;transcript_id=Cattle_Y_T01633;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48990202	48990347	.	-	2	ID=Cattle_Y_C02606;Parent=Cattle_Y_T01633;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_8;gene_id=Cattle_Y_G00928;transcript_id=Cattle_Y_T01633;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48990443	48990554	.	-	0	ID=Cattle_Y_C02607;Parent=Cattle_Y_T01633;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_8;gene_id=Cattle_Y_G00928;transcript_id=Cattle_Y_T01633;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48990738	48990815	.	-	0	ID=Cattle_Y_C02608;Parent=Cattle_Y_T01633;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_8;gene_id=Cattle_Y_G00928;transcript_id=Cattle_Y_T01633;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48991615	48992030	.	-	2	ID=Cattle_Y_C02609;Parent=Cattle_Y_T01633;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_8;gene_id=Cattle_Y_G00928;transcript_id=Cattle_Y_T01633;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48992127	48992250	.	-	0	ID=Cattle_Y_C02610;Parent=Cattle_Y_T01633;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_8;gene_id=Cattle_Y_G00928;transcript_id=Cattle_Y_T01633;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	48997410	48999652	.	-	.	ID=Cattle_Y_G00929;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00929;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	48997410	48999652	.	-	.	ID=Cattle_Y_T01634;Parent=Cattle_Y_G00929;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01634;gene_id=Cattle_Y_G00929;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	48997410	48997487	.	-	.	ID=Cattle_Y_E03007;Parent=Cattle_Y_T01634;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01634;gene_id=Cattle_Y_G00929;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	48997604	48997749	.	-	.	ID=Cattle_Y_E03008;Parent=Cattle_Y_T01634;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01634;gene_id=Cattle_Y_G00929;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	48997845	48997956	.	-	.	ID=Cattle_Y_E03009;Parent=Cattle_Y_T01634;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01634;gene_id=Cattle_Y_G00929;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	48998140	48998217	.	-	.	ID=Cattle_Y_E03010;Parent=Cattle_Y_T01634;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01634;gene_id=Cattle_Y_G00929;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	48999017	48999432	.	-	.	ID=Cattle_Y_E03011;Parent=Cattle_Y_T01634;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01634;gene_id=Cattle_Y_G00929;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	48999529	48999652	.	-	.	ID=Cattle_Y_E03012;Parent=Cattle_Y_T01634;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01634;gene_id=Cattle_Y_G00929;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	48997410	48997487	.	-	0	ID=Cattle_Y_C02611;Parent=Cattle_Y_T01634;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_12;gene_id=Cattle_Y_G00929;transcript_id=Cattle_Y_T01634;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48997604	48997749	.	-	2	ID=Cattle_Y_C02612;Parent=Cattle_Y_T01634;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_12;gene_id=Cattle_Y_G00929;transcript_id=Cattle_Y_T01634;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48997845	48997956	.	-	0	ID=Cattle_Y_C02613;Parent=Cattle_Y_T01634;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_12;gene_id=Cattle_Y_G00929;transcript_id=Cattle_Y_T01634;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48998140	48998217	.	-	0	ID=Cattle_Y_C02614;Parent=Cattle_Y_T01634;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_12;gene_id=Cattle_Y_G00929;transcript_id=Cattle_Y_T01634;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48999017	48999432	.	-	2	ID=Cattle_Y_C02615;Parent=Cattle_Y_T01634;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_12;gene_id=Cattle_Y_G00929;transcript_id=Cattle_Y_T01634;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	48999529	48999652	.	-	0	ID=Cattle_Y_C02616;Parent=Cattle_Y_T01634;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_12;gene_id=Cattle_Y_G00929;transcript_id=Cattle_Y_T01634;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49004809	49007049	.	-	.	ID=Cattle_Y_G00930;Dbxref=GeneID:132344582;Name=LOC132344582;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344582;gene_biotype=protein_coding;gene_id=Cattle_Y_G00930;source_id=gene-LOC132344582
haplotype2-0000357	CAT	mRNA	49004809	49007049	.	-	.	ID=Cattle_Y_T01635;Parent=Cattle_Y_G00930;Dbxref=GeneID:132344582,GenBank:XM_059884248.1;Name=XM_059884248.1;gbkey=mRNA;gene=LOC132344582;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01635;gene_id=Cattle_Y_G00930;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884248.1
haplotype2-0000357	CAT	exon	49004809	49004886	.	-	.	ID=Cattle_Y_E03013;Parent=Cattle_Y_T01635;Dbxref=GeneID:132344582,GenBank:XM_059884248.1;gbkey=mRNA;gene=LOC132344582;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01635;gene_id=Cattle_Y_G00930;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884248.1-6
haplotype2-0000357	CAT	exon	49005003	49005148	.	-	.	ID=Cattle_Y_E03014;Parent=Cattle_Y_T01635;Dbxref=GeneID:132344582,GenBank:XM_059884248.1;gbkey=mRNA;gene=LOC132344582;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01635;gene_id=Cattle_Y_G00930;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884248.1-5
haplotype2-0000357	CAT	exon	49005244	49005355	.	-	.	ID=Cattle_Y_E03015;Parent=Cattle_Y_T01635;Dbxref=GeneID:132344582,GenBank:XM_059884248.1;gbkey=mRNA;gene=LOC132344582;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01635;gene_id=Cattle_Y_G00930;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884248.1-4
haplotype2-0000357	CAT	exon	49005539	49005616	.	-	.	ID=Cattle_Y_E03016;Parent=Cattle_Y_T01635;Dbxref=GeneID:132344582,GenBank:XM_059884248.1;gbkey=mRNA;gene=LOC132344582;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01635;gene_id=Cattle_Y_G00930;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884248.1-3
haplotype2-0000357	CAT	exon	49006414	49006829	.	-	.	ID=Cattle_Y_E03017;Parent=Cattle_Y_T01635;Dbxref=GeneID:132344582,GenBank:XM_059884248.1;gbkey=mRNA;gene=LOC132344582;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01635;gene_id=Cattle_Y_G00930;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884248.1-2
haplotype2-0000357	CAT	exon	49006926	49007049	.	-	.	ID=Cattle_Y_E03018;Parent=Cattle_Y_T01635;Dbxref=GeneID:132344582,GenBank:XM_059884248.1;gbkey=mRNA;gene=LOC132344582;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01635;gene_id=Cattle_Y_G00930;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884248.1-1
haplotype2-0000357	CAT	CDS	49004809	49004886	.	-	0	ID=Cattle_Y_C02617;Parent=Cattle_Y_T01635;Dbxref=GeneID:132344582,GenBank:XP_059740231.1;Name=XP_059740231.1;gbkey=CDS;gene=LOC132344582;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740231.1_1;gene_id=Cattle_Y_G00930;transcript_id=Cattle_Y_T01635;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49005003	49005148	.	-	2	ID=Cattle_Y_C02618;Parent=Cattle_Y_T01635;Dbxref=GeneID:132344582,GenBank:XP_059740231.1;Name=XP_059740231.1;gbkey=CDS;gene=LOC132344582;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740231.1_1;gene_id=Cattle_Y_G00930;transcript_id=Cattle_Y_T01635;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49005244	49005355	.	-	0	ID=Cattle_Y_C02619;Parent=Cattle_Y_T01635;Dbxref=GeneID:132344582,GenBank:XP_059740231.1;Name=XP_059740231.1;gbkey=CDS;gene=LOC132344582;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740231.1_1;gene_id=Cattle_Y_G00930;transcript_id=Cattle_Y_T01635;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49005539	49005616	.	-	0	ID=Cattle_Y_C02620;Parent=Cattle_Y_T01635;Dbxref=GeneID:132344582,GenBank:XP_059740231.1;Name=XP_059740231.1;gbkey=CDS;gene=LOC132344582;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740231.1_1;gene_id=Cattle_Y_G00930;transcript_id=Cattle_Y_T01635;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49006414	49006829	.	-	2	ID=Cattle_Y_C02621;Parent=Cattle_Y_T01635;Dbxref=GeneID:132344582,GenBank:XP_059740231.1;Name=XP_059740231.1;gbkey=CDS;gene=LOC132344582;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740231.1_1;gene_id=Cattle_Y_G00930;transcript_id=Cattle_Y_T01635;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49006926	49007049	.	-	0	ID=Cattle_Y_C02622;Parent=Cattle_Y_T01635;Dbxref=GeneID:132344582,GenBank:XP_059740231.1;Name=XP_059740231.1;gbkey=CDS;gene=LOC132344582;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740231.1_1;gene_id=Cattle_Y_G00930;transcript_id=Cattle_Y_T01635;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49011240	49014427	.	-	.	ID=Cattle_Y_G00931;Dbxref=BGD:BT19054,GeneID:281554;Name=TSPY;description=testis specific protein%2C Y-linked 1;gbkey=Gene;gene=TSPY;gene_biotype=protein_coding;gene_synonym=TSPY-M1,TSPY1;gene_id=Cattle_Y_G00931;source_id=gene-TSPY
haplotype2-0000357	CAT	mRNA	49011240	49014427	.	-	.	ID=Cattle_Y_T01636;Parent=Cattle_Y_G00931;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Name=NM_001244608.1;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein%2C Y-linked 1;transcript_id=Cattle_Y_T01636;gene_id=Cattle_Y_G00931;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001244608.1
haplotype2-0000357	CAT	exon	49011240	49011455	.	-	.	ID=Cattle_Y_E03019;Parent=Cattle_Y_T01636;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01636;gene_id=Cattle_Y_G00931;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-7
haplotype2-0000357	CAT	exon	49012175	49012282	.	-	.	ID=Cattle_Y_E03020;Parent=Cattle_Y_T01636;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01636;gene_id=Cattle_Y_G00931;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-6
haplotype2-0000357	CAT	exon	49012399	49012544	.	-	.	ID=Cattle_Y_E03021;Parent=Cattle_Y_T01636;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01636;gene_id=Cattle_Y_G00931;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-5
haplotype2-0000357	CAT	exon	49012640	49012751	.	-	.	ID=Cattle_Y_E03022;Parent=Cattle_Y_T01636;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01636;gene_id=Cattle_Y_G00931;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-4
haplotype2-0000357	CAT	exon	49012935	49013012	.	-	.	ID=Cattle_Y_E03023;Parent=Cattle_Y_T01636;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01636;gene_id=Cattle_Y_G00931;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-3
haplotype2-0000357	CAT	exon	49013792	49014207	.	-	.	ID=Cattle_Y_E03024;Parent=Cattle_Y_T01636;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01636;gene_id=Cattle_Y_G00931;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-2
haplotype2-0000357	CAT	exon	49014304	49014427	.	-	.	ID=Cattle_Y_E03025;Parent=Cattle_Y_T01636;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01636;gene_id=Cattle_Y_G00931;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-1
haplotype2-0000357	CAT	CDS	49012205	49012282	.	-	0	ID=Cattle_Y_C02623;Parent=Cattle_Y_T01636;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1;gene_id=Cattle_Y_G00931;transcript_id=Cattle_Y_T01636;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49012399	49012544	.	-	2	ID=Cattle_Y_C02624;Parent=Cattle_Y_T01636;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1;gene_id=Cattle_Y_G00931;transcript_id=Cattle_Y_T01636;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49012640	49012751	.	-	0	ID=Cattle_Y_C02625;Parent=Cattle_Y_T01636;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1;gene_id=Cattle_Y_G00931;transcript_id=Cattle_Y_T01636;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49012935	49013012	.	-	0	ID=Cattle_Y_C02626;Parent=Cattle_Y_T01636;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1;gene_id=Cattle_Y_G00931;transcript_id=Cattle_Y_T01636;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49013792	49014207	.	-	2	ID=Cattle_Y_C02627;Parent=Cattle_Y_T01636;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1;gene_id=Cattle_Y_G00931;transcript_id=Cattle_Y_T01636;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49014304	49014427	.	-	0	ID=Cattle_Y_C02628;Parent=Cattle_Y_T01636;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1;gene_id=Cattle_Y_G00931;transcript_id=Cattle_Y_T01636;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49019721	49021941	.	-	.	ID=Cattle_Y_G00932;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00932;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	49019721	49021941	.	-	.	ID=Cattle_Y_T01637;Parent=Cattle_Y_G00932;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01637;gene_id=Cattle_Y_G00932;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	49019721	49019798	.	-	.	ID=Cattle_Y_E03026;Parent=Cattle_Y_T01637;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01637;gene_id=Cattle_Y_G00932;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	49019915	49020060	.	-	.	ID=Cattle_Y_E03027;Parent=Cattle_Y_T01637;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01637;gene_id=Cattle_Y_G00932;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	49020156	49020267	.	-	.	ID=Cattle_Y_E03028;Parent=Cattle_Y_T01637;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01637;gene_id=Cattle_Y_G00932;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	49020451	49020528	.	-	.	ID=Cattle_Y_E03029;Parent=Cattle_Y_T01637;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01637;gene_id=Cattle_Y_G00932;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	49021306	49021721	.	-	.	ID=Cattle_Y_E03030;Parent=Cattle_Y_T01637;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01637;gene_id=Cattle_Y_G00932;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	49021818	49021941	.	-	.	ID=Cattle_Y_E03031;Parent=Cattle_Y_T01637;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01637;gene_id=Cattle_Y_G00932;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	49019721	49019798	.	-	0	ID=Cattle_Y_C02629;Parent=Cattle_Y_T01637;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_11;gene_id=Cattle_Y_G00932;transcript_id=Cattle_Y_T01637;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49019915	49020060	.	-	2	ID=Cattle_Y_C02630;Parent=Cattle_Y_T01637;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_11;gene_id=Cattle_Y_G00932;transcript_id=Cattle_Y_T01637;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49020156	49020267	.	-	0	ID=Cattle_Y_C02631;Parent=Cattle_Y_T01637;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_11;gene_id=Cattle_Y_G00932;transcript_id=Cattle_Y_T01637;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49020451	49020528	.	-	0	ID=Cattle_Y_C02632;Parent=Cattle_Y_T01637;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_11;gene_id=Cattle_Y_G00932;transcript_id=Cattle_Y_T01637;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49021306	49021721	.	-	2	ID=Cattle_Y_C02633;Parent=Cattle_Y_T01637;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_11;gene_id=Cattle_Y_G00932;transcript_id=Cattle_Y_T01637;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49021818	49021941	.	-	0	ID=Cattle_Y_C02634;Parent=Cattle_Y_T01637;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_11;gene_id=Cattle_Y_G00932;transcript_id=Cattle_Y_T01637;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49027234	49029454	.	-	.	ID=Cattle_Y_G00933;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00933;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	49027234	49029454	.	-	.	ID=Cattle_Y_T01638;Parent=Cattle_Y_G00933;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01638;gene_id=Cattle_Y_G00933;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	49027234	49027311	.	-	.	ID=Cattle_Y_E03032;Parent=Cattle_Y_T01638;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01638;gene_id=Cattle_Y_G00933;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	49027428	49027573	.	-	.	ID=Cattle_Y_E03033;Parent=Cattle_Y_T01638;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01638;gene_id=Cattle_Y_G00933;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	49027669	49027780	.	-	.	ID=Cattle_Y_E03034;Parent=Cattle_Y_T01638;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01638;gene_id=Cattle_Y_G00933;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	49027964	49028041	.	-	.	ID=Cattle_Y_E03035;Parent=Cattle_Y_T01638;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01638;gene_id=Cattle_Y_G00933;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	49028819	49029234	.	-	.	ID=Cattle_Y_E03036;Parent=Cattle_Y_T01638;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01638;gene_id=Cattle_Y_G00933;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	49029331	49029454	.	-	.	ID=Cattle_Y_E03037;Parent=Cattle_Y_T01638;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01638;gene_id=Cattle_Y_G00933;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	49027234	49027311	.	-	0	ID=Cattle_Y_C02635;Parent=Cattle_Y_T01638;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_5;gene_id=Cattle_Y_G00933;transcript_id=Cattle_Y_T01638;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49027428	49027573	.	-	2	ID=Cattle_Y_C02636;Parent=Cattle_Y_T01638;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_5;gene_id=Cattle_Y_G00933;transcript_id=Cattle_Y_T01638;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49027669	49027780	.	-	0	ID=Cattle_Y_C02637;Parent=Cattle_Y_T01638;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_5;gene_id=Cattle_Y_G00933;transcript_id=Cattle_Y_T01638;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49027964	49028041	.	-	0	ID=Cattle_Y_C02638;Parent=Cattle_Y_T01638;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_5;gene_id=Cattle_Y_G00933;transcript_id=Cattle_Y_T01638;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49028819	49029234	.	-	2	ID=Cattle_Y_C02639;Parent=Cattle_Y_T01638;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_5;gene_id=Cattle_Y_G00933;transcript_id=Cattle_Y_T01638;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49029331	49029454	.	-	0	ID=Cattle_Y_C02640;Parent=Cattle_Y_T01638;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_5;gene_id=Cattle_Y_G00933;transcript_id=Cattle_Y_T01638;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49034747	49036967	.	-	.	ID=Cattle_Y_G00934;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00934;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	49034747	49036967	.	-	.	ID=Cattle_Y_T01639;Parent=Cattle_Y_G00934;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01639;gene_id=Cattle_Y_G00934;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	49034747	49034824	.	-	.	ID=Cattle_Y_E03038;Parent=Cattle_Y_T01639;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01639;gene_id=Cattle_Y_G00934;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	49034941	49035086	.	-	.	ID=Cattle_Y_E03039;Parent=Cattle_Y_T01639;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01639;gene_id=Cattle_Y_G00934;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	49035182	49035293	.	-	.	ID=Cattle_Y_E03040;Parent=Cattle_Y_T01639;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01639;gene_id=Cattle_Y_G00934;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	49035477	49035554	.	-	.	ID=Cattle_Y_E03041;Parent=Cattle_Y_T01639;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01639;gene_id=Cattle_Y_G00934;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	49036332	49036747	.	-	.	ID=Cattle_Y_E03042;Parent=Cattle_Y_T01639;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01639;gene_id=Cattle_Y_G00934;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	49036844	49036967	.	-	.	ID=Cattle_Y_E03043;Parent=Cattle_Y_T01639;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01639;gene_id=Cattle_Y_G00934;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	49034747	49034824	.	-	0	ID=Cattle_Y_C02641;Parent=Cattle_Y_T01639;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_4;gene_id=Cattle_Y_G00934;transcript_id=Cattle_Y_T01639;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49034941	49035086	.	-	2	ID=Cattle_Y_C02642;Parent=Cattle_Y_T01639;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_4;gene_id=Cattle_Y_G00934;transcript_id=Cattle_Y_T01639;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49035182	49035293	.	-	0	ID=Cattle_Y_C02643;Parent=Cattle_Y_T01639;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_4;gene_id=Cattle_Y_G00934;transcript_id=Cattle_Y_T01639;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49035477	49035554	.	-	0	ID=Cattle_Y_C02644;Parent=Cattle_Y_T01639;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_4;gene_id=Cattle_Y_G00934;transcript_id=Cattle_Y_T01639;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49036332	49036747	.	-	2	ID=Cattle_Y_C02645;Parent=Cattle_Y_T01639;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_4;gene_id=Cattle_Y_G00934;transcript_id=Cattle_Y_T01639;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49036844	49036967	.	-	0	ID=Cattle_Y_C02646;Parent=Cattle_Y_T01639;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_4;gene_id=Cattle_Y_G00934;transcript_id=Cattle_Y_T01639;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49042260	49044480	.	-	.	ID=Cattle_Y_G00935;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00935;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	49042260	49044480	.	-	.	ID=Cattle_Y_T01640;Parent=Cattle_Y_G00935;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01640;gene_id=Cattle_Y_G00935;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	49042260	49042337	.	-	.	ID=Cattle_Y_E03044;Parent=Cattle_Y_T01640;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01640;gene_id=Cattle_Y_G00935;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	49042454	49042599	.	-	.	ID=Cattle_Y_E03045;Parent=Cattle_Y_T01640;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01640;gene_id=Cattle_Y_G00935;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	49042695	49042806	.	-	.	ID=Cattle_Y_E03046;Parent=Cattle_Y_T01640;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01640;gene_id=Cattle_Y_G00935;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	49042990	49043067	.	-	.	ID=Cattle_Y_E03047;Parent=Cattle_Y_T01640;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01640;gene_id=Cattle_Y_G00935;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	49043845	49044260	.	-	.	ID=Cattle_Y_E03048;Parent=Cattle_Y_T01640;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01640;gene_id=Cattle_Y_G00935;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	49044357	49044480	.	-	.	ID=Cattle_Y_E03049;Parent=Cattle_Y_T01640;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01640;gene_id=Cattle_Y_G00935;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	49042260	49042337	.	-	0	ID=Cattle_Y_C02647;Parent=Cattle_Y_T01640;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_6;gene_id=Cattle_Y_G00935;transcript_id=Cattle_Y_T01640;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49042454	49042599	.	-	2	ID=Cattle_Y_C02648;Parent=Cattle_Y_T01640;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_6;gene_id=Cattle_Y_G00935;transcript_id=Cattle_Y_T01640;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49042695	49042806	.	-	0	ID=Cattle_Y_C02649;Parent=Cattle_Y_T01640;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_6;gene_id=Cattle_Y_G00935;transcript_id=Cattle_Y_T01640;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49042990	49043067	.	-	0	ID=Cattle_Y_C02650;Parent=Cattle_Y_T01640;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_6;gene_id=Cattle_Y_G00935;transcript_id=Cattle_Y_T01640;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49043845	49044260	.	-	2	ID=Cattle_Y_C02651;Parent=Cattle_Y_T01640;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_6;gene_id=Cattle_Y_G00935;transcript_id=Cattle_Y_T01640;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49044357	49044480	.	-	0	ID=Cattle_Y_C02652;Parent=Cattle_Y_T01640;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_6;gene_id=Cattle_Y_G00935;transcript_id=Cattle_Y_T01640;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49057295	49059418	.	-	.	ID=Cattle_Y_G00936;Dbxref=GeneID:132344578;Name=LOC132344578;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344578;gene_biotype=protein_coding;partial=true;start_range=.,9251121;gene_id=Cattle_Y_G00936;source_id=gene-LOC132344578
haplotype2-0000357	CAT	mRNA	49057295	49059418	.	-	.	ID=Cattle_Y_T01641;Parent=Cattle_Y_G00936;Dbxref=GeneID:132344578,GenBank:XM_059884243.1;Name=XM_059884243.1;gbkey=mRNA;gene=LOC132344578;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9251121;transcript_id=Cattle_Y_T01641;gene_id=Cattle_Y_G00936;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884243.1
haplotype2-0000357	CAT	exon	49057295	49057372	.	-	.	ID=Cattle_Y_E03050;Parent=Cattle_Y_T01641;Dbxref=GeneID:132344578,GenBank:XM_059884243.1;gbkey=mRNA;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01641;gene_id=Cattle_Y_G00936;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884243.1-6
haplotype2-0000357	CAT	exon	49057489	49057634	.	-	.	ID=Cattle_Y_E03051;Parent=Cattle_Y_T01641;Dbxref=GeneID:132344578,GenBank:XM_059884243.1;gbkey=mRNA;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01641;gene_id=Cattle_Y_G00936;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884243.1-5
haplotype2-0000357	CAT	exon	49057730	49057841	.	-	.	ID=Cattle_Y_E03052;Parent=Cattle_Y_T01641;Dbxref=GeneID:132344578,GenBank:XM_059884243.1;gbkey=mRNA;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01641;gene_id=Cattle_Y_G00936;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884243.1-4
haplotype2-0000357	CAT	exon	49058025	49058102	.	-	.	ID=Cattle_Y_E03053;Parent=Cattle_Y_T01641;Dbxref=GeneID:132344578,GenBank:XM_059884243.1;gbkey=mRNA;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01641;gene_id=Cattle_Y_G00936;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884243.1-3
haplotype2-0000357	CAT	exon	49058890	49059305	.	-	.	ID=Cattle_Y_E03054;Parent=Cattle_Y_T01641;Dbxref=GeneID:132344578,GenBank:XM_059884243.1;gbkey=mRNA;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01641;gene_id=Cattle_Y_G00936;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884243.1-2
haplotype2-0000357	CAT	exon	49059403	49059418	.	-	.	ID=Cattle_Y_E03055;Parent=Cattle_Y_T01641;Dbxref=GeneID:132344578,GenBank:XM_059884243.1;gbkey=mRNA;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9251121;transcript_id=Cattle_Y_T01641;gene_id=Cattle_Y_G00936;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884243.1-1
haplotype2-0000357	CAT	CDS	49057295	49057372	.	-	0	ID=Cattle_Y_C02653;Parent=Cattle_Y_T01641;Dbxref=GeneID:132344578,GenBank:XP_059740226.1;Name=XP_059740226.1;gbkey=CDS;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740226.1_1;gene_id=Cattle_Y_G00936;transcript_id=Cattle_Y_T01641;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49057489	49057634	.	-	2	ID=Cattle_Y_C02654;Parent=Cattle_Y_T01641;Dbxref=GeneID:132344578,GenBank:XP_059740226.1;Name=XP_059740226.1;gbkey=CDS;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740226.1_1;gene_id=Cattle_Y_G00936;transcript_id=Cattle_Y_T01641;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49057730	49057841	.	-	0	ID=Cattle_Y_C02655;Parent=Cattle_Y_T01641;Dbxref=GeneID:132344578,GenBank:XP_059740226.1;Name=XP_059740226.1;gbkey=CDS;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740226.1_1;gene_id=Cattle_Y_G00936;transcript_id=Cattle_Y_T01641;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49058025	49058102	.	-	0	ID=Cattle_Y_C02656;Parent=Cattle_Y_T01641;Dbxref=GeneID:132344578,GenBank:XP_059740226.1;Name=XP_059740226.1;gbkey=CDS;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740226.1_1;gene_id=Cattle_Y_G00936;transcript_id=Cattle_Y_T01641;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49058890	49059305	.	-	2	ID=Cattle_Y_C02657;Parent=Cattle_Y_T01641;Dbxref=GeneID:132344578,GenBank:XP_059740226.1;Name=XP_059740226.1;gbkey=CDS;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740226.1_1;gene_id=Cattle_Y_G00936;transcript_id=Cattle_Y_T01641;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49059403	49059418	.	-	0	ID=Cattle_Y_C02658;Parent=Cattle_Y_T01641;Dbxref=GeneID:132344578,GenBank:XP_059740226.1;Name=XP_059740226.1;gbkey=CDS;gene=LOC132344578;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740226.1_1;start_range=.,9251121;gene_id=Cattle_Y_G00936;transcript_id=Cattle_Y_T01641;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49064826	49067056	.	-	.	ID=Cattle_Y_G00937;Dbxref=GeneID:132344572;Name=LOC132344572;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344572;gene_biotype=protein_coding;gene_id=Cattle_Y_G00937;source_id=gene-LOC132344572
haplotype2-0000357	CAT	mRNA	49064826	49067056	.	-	.	ID=Cattle_Y_T01642;Parent=Cattle_Y_G00937;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;Name=XM_059884237.1;gbkey=mRNA;gene=LOC132344572;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 7%25 coverage of the annotated genomic feature by RNAseq alignments;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01642;gene_id=Cattle_Y_G00937;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884237.1
haplotype2-0000357	CAT	exon	49064826	49064903	.	-	.	ID=Cattle_Y_E03056;Parent=Cattle_Y_T01642;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01642;gene_id=Cattle_Y_G00937;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-6
haplotype2-0000357	CAT	exon	49065020	49065165	.	-	.	ID=Cattle_Y_E03057;Parent=Cattle_Y_T01642;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01642;gene_id=Cattle_Y_G00937;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-5
haplotype2-0000357	CAT	exon	49065261	49065372	.	-	.	ID=Cattle_Y_E03058;Parent=Cattle_Y_T01642;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01642;gene_id=Cattle_Y_G00937;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-4
haplotype2-0000357	CAT	exon	49065556	49065633	.	-	.	ID=Cattle_Y_E03059;Parent=Cattle_Y_T01642;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01642;gene_id=Cattle_Y_G00937;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-3
haplotype2-0000357	CAT	exon	49066421	49066836	.	-	.	ID=Cattle_Y_E03060;Parent=Cattle_Y_T01642;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01642;gene_id=Cattle_Y_G00937;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-2
haplotype2-0000357	CAT	exon	49066933	49067056	.	-	.	ID=Cattle_Y_E03061;Parent=Cattle_Y_T01642;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01642;gene_id=Cattle_Y_G00937;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-1
haplotype2-0000357	CAT	CDS	49064826	49064903	.	-	0	ID=Cattle_Y_C02659;Parent=Cattle_Y_T01642;Dbxref=GeneID:132344572,GenBank:XP_059740220.1;Name=XP_059740220.1;gbkey=CDS;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740220.1_2;gene_id=Cattle_Y_G00937;transcript_id=Cattle_Y_T01642;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49065020	49065165	.	-	2	ID=Cattle_Y_C02660;Parent=Cattle_Y_T01642;Dbxref=GeneID:132344572,GenBank:XP_059740220.1;Name=XP_059740220.1;gbkey=CDS;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740220.1_2;gene_id=Cattle_Y_G00937;transcript_id=Cattle_Y_T01642;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49065261	49065372	.	-	0	ID=Cattle_Y_C02661;Parent=Cattle_Y_T01642;Dbxref=GeneID:132344572,GenBank:XP_059740220.1;Name=XP_059740220.1;gbkey=CDS;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740220.1_2;gene_id=Cattle_Y_G00937;transcript_id=Cattle_Y_T01642;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49065556	49065633	.	-	0	ID=Cattle_Y_C02662;Parent=Cattle_Y_T01642;Dbxref=GeneID:132344572,GenBank:XP_059740220.1;Name=XP_059740220.1;gbkey=CDS;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740220.1_2;gene_id=Cattle_Y_G00937;transcript_id=Cattle_Y_T01642;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49066421	49066836	.	-	2	ID=Cattle_Y_C02663;Parent=Cattle_Y_T01642;Dbxref=GeneID:132344572,GenBank:XP_059740220.1;Name=XP_059740220.1;gbkey=CDS;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740220.1_2;gene_id=Cattle_Y_G00937;transcript_id=Cattle_Y_T01642;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49066933	49067056	.	-	0	ID=Cattle_Y_C02664;Parent=Cattle_Y_T01642;Dbxref=GeneID:132344572,GenBank:XP_059740220.1;Name=XP_059740220.1;gbkey=CDS;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740220.1_2;gene_id=Cattle_Y_G00937;transcript_id=Cattle_Y_T01642;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49086435	49089629	.	-	.	ID=Cattle_Y_G00938;Dbxref=BGD:BT19054,GeneID:281554;Name=TSPY;description=testis specific protein%2C Y-linked 1;gbkey=Gene;gene=TSPY;gene_biotype=protein_coding;gene_synonym=TSPY-M1,TSPY1;gene_id=Cattle_Y_G00938;source_id=gene-TSPY
haplotype2-0000357	CAT	mRNA	49086435	49089629	.	-	.	ID=Cattle_Y_T01643;Parent=Cattle_Y_G00938;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Name=NM_001244608.1;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein%2C Y-linked 1;transcript_id=Cattle_Y_T01643;gene_id=Cattle_Y_G00938;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001244608.1
haplotype2-0000357	CAT	exon	49086435	49086650	.	-	.	ID=Cattle_Y_E03062;Parent=Cattle_Y_T01643;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01643;gene_id=Cattle_Y_G00938;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-7
haplotype2-0000357	CAT	exon	49087370	49087477	.	-	.	ID=Cattle_Y_E03063;Parent=Cattle_Y_T01643;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01643;gene_id=Cattle_Y_G00938;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-6
haplotype2-0000357	CAT	exon	49087594	49087739	.	-	.	ID=Cattle_Y_E03064;Parent=Cattle_Y_T01643;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01643;gene_id=Cattle_Y_G00938;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-5
haplotype2-0000357	CAT	exon	49087835	49087946	.	-	.	ID=Cattle_Y_E03065;Parent=Cattle_Y_T01643;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01643;gene_id=Cattle_Y_G00938;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-4
haplotype2-0000357	CAT	exon	49088130	49088207	.	-	.	ID=Cattle_Y_E03066;Parent=Cattle_Y_T01643;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01643;gene_id=Cattle_Y_G00938;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-3
haplotype2-0000357	CAT	exon	49088994	49089409	.	-	.	ID=Cattle_Y_E03067;Parent=Cattle_Y_T01643;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01643;gene_id=Cattle_Y_G00938;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-2
haplotype2-0000357	CAT	exon	49089506	49089629	.	-	.	ID=Cattle_Y_E03068;Parent=Cattle_Y_T01643;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01643;gene_id=Cattle_Y_G00938;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-1
haplotype2-0000357	CAT	CDS	49087400	49087477	.	-	0	ID=Cattle_Y_C02665;Parent=Cattle_Y_T01643;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_4;gene_id=Cattle_Y_G00938;transcript_id=Cattle_Y_T01643;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49087594	49087739	.	-	2	ID=Cattle_Y_C02666;Parent=Cattle_Y_T01643;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_4;gene_id=Cattle_Y_G00938;transcript_id=Cattle_Y_T01643;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49087835	49087946	.	-	0	ID=Cattle_Y_C02667;Parent=Cattle_Y_T01643;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_4;gene_id=Cattle_Y_G00938;transcript_id=Cattle_Y_T01643;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49088130	49088207	.	-	0	ID=Cattle_Y_C02668;Parent=Cattle_Y_T01643;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_4;gene_id=Cattle_Y_G00938;transcript_id=Cattle_Y_T01643;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49088994	49089409	.	-	2	ID=Cattle_Y_C02669;Parent=Cattle_Y_T01643;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_4;gene_id=Cattle_Y_G00938;transcript_id=Cattle_Y_T01643;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49089506	49089629	.	-	0	ID=Cattle_Y_C02670;Parent=Cattle_Y_T01643;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_4;gene_id=Cattle_Y_G00938;transcript_id=Cattle_Y_T01643;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49094925	49097154	.	-	.	ID=Cattle_Y_G00939;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00939;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	49094925	49097154	.	-	.	ID=Cattle_Y_T01644;Parent=Cattle_Y_G00939;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01644;gene_id=Cattle_Y_G00939;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	49094925	49095002	.	-	.	ID=Cattle_Y_E03069;Parent=Cattle_Y_T01644;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01644;gene_id=Cattle_Y_G00939;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	49095119	49095264	.	-	.	ID=Cattle_Y_E03070;Parent=Cattle_Y_T01644;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01644;gene_id=Cattle_Y_G00939;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	49095360	49095471	.	-	.	ID=Cattle_Y_E03071;Parent=Cattle_Y_T01644;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01644;gene_id=Cattle_Y_G00939;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	49095655	49095732	.	-	.	ID=Cattle_Y_E03072;Parent=Cattle_Y_T01644;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01644;gene_id=Cattle_Y_G00939;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	49096519	49096934	.	-	.	ID=Cattle_Y_E03073;Parent=Cattle_Y_T01644;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01644;gene_id=Cattle_Y_G00939;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	49097031	49097154	.	-	.	ID=Cattle_Y_E03074;Parent=Cattle_Y_T01644;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01644;gene_id=Cattle_Y_G00939;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	49094925	49095002	.	-	0	ID=Cattle_Y_C02671;Parent=Cattle_Y_T01644;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_22;gene_id=Cattle_Y_G00939;transcript_id=Cattle_Y_T01644;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49095119	49095264	.	-	2	ID=Cattle_Y_C02672;Parent=Cattle_Y_T01644;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_22;gene_id=Cattle_Y_G00939;transcript_id=Cattle_Y_T01644;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49095360	49095471	.	-	0	ID=Cattle_Y_C02673;Parent=Cattle_Y_T01644;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_22;gene_id=Cattle_Y_G00939;transcript_id=Cattle_Y_T01644;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49095655	49095732	.	-	0	ID=Cattle_Y_C02674;Parent=Cattle_Y_T01644;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_22;gene_id=Cattle_Y_G00939;transcript_id=Cattle_Y_T01644;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49096519	49096934	.	-	2	ID=Cattle_Y_C02675;Parent=Cattle_Y_T01644;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_22;gene_id=Cattle_Y_G00939;transcript_id=Cattle_Y_T01644;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49097031	49097154	.	-	0	ID=Cattle_Y_C02676;Parent=Cattle_Y_T01644;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_22;gene_id=Cattle_Y_G00939;transcript_id=Cattle_Y_T01644;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49101488	49104682	.	-	.	ID=Cattle_Y_G00940;Dbxref=BGD:BT19054,GeneID:281554;Name=TSPY;description=testis specific protein%2C Y-linked 1;gbkey=Gene;gene=TSPY;gene_biotype=protein_coding;gene_synonym=TSPY-M1,TSPY1;gene_id=Cattle_Y_G00940;source_id=gene-TSPY
haplotype2-0000357	CAT	mRNA	49101488	49104682	.	-	.	ID=Cattle_Y_T01645;Parent=Cattle_Y_G00940;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Name=NM_001244608.1;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein%2C Y-linked 1;transcript_id=Cattle_Y_T01645;gene_id=Cattle_Y_G00940;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001244608.1
haplotype2-0000357	CAT	exon	49101488	49101703	.	-	.	ID=Cattle_Y_E03075;Parent=Cattle_Y_T01645;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01645;gene_id=Cattle_Y_G00940;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-7
haplotype2-0000357	CAT	exon	49102423	49102530	.	-	.	ID=Cattle_Y_E03076;Parent=Cattle_Y_T01645;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01645;gene_id=Cattle_Y_G00940;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-6
haplotype2-0000357	CAT	exon	49102647	49102792	.	-	.	ID=Cattle_Y_E03077;Parent=Cattle_Y_T01645;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01645;gene_id=Cattle_Y_G00940;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-5
haplotype2-0000357	CAT	exon	49102888	49102999	.	-	.	ID=Cattle_Y_E03078;Parent=Cattle_Y_T01645;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01645;gene_id=Cattle_Y_G00940;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-4
haplotype2-0000357	CAT	exon	49103183	49103260	.	-	.	ID=Cattle_Y_E03079;Parent=Cattle_Y_T01645;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01645;gene_id=Cattle_Y_G00940;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-3
haplotype2-0000357	CAT	exon	49104047	49104462	.	-	.	ID=Cattle_Y_E03080;Parent=Cattle_Y_T01645;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01645;gene_id=Cattle_Y_G00940;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-2
haplotype2-0000357	CAT	exon	49104559	49104682	.	-	.	ID=Cattle_Y_E03081;Parent=Cattle_Y_T01645;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01645;gene_id=Cattle_Y_G00940;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-1
haplotype2-0000357	CAT	CDS	49102453	49102530	.	-	0	ID=Cattle_Y_C02677;Parent=Cattle_Y_T01645;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_3;gene_id=Cattle_Y_G00940;transcript_id=Cattle_Y_T01645;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49102647	49102792	.	-	2	ID=Cattle_Y_C02678;Parent=Cattle_Y_T01645;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_3;gene_id=Cattle_Y_G00940;transcript_id=Cattle_Y_T01645;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49102888	49102999	.	-	0	ID=Cattle_Y_C02679;Parent=Cattle_Y_T01645;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_3;gene_id=Cattle_Y_G00940;transcript_id=Cattle_Y_T01645;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49103183	49103260	.	-	0	ID=Cattle_Y_C02680;Parent=Cattle_Y_T01645;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_3;gene_id=Cattle_Y_G00940;transcript_id=Cattle_Y_T01645;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49104047	49104462	.	-	2	ID=Cattle_Y_C02681;Parent=Cattle_Y_T01645;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_3;gene_id=Cattle_Y_G00940;transcript_id=Cattle_Y_T01645;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49104559	49104682	.	-	0	ID=Cattle_Y_C02682;Parent=Cattle_Y_T01645;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_3;gene_id=Cattle_Y_G00940;transcript_id=Cattle_Y_T01645;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49109013	49112207	.	-	.	ID=Cattle_Y_G00941;Dbxref=BGD:BT19054,GeneID:281554;Name=TSPY;description=testis specific protein%2C Y-linked 1;gbkey=Gene;gene=TSPY;gene_biotype=protein_coding;gene_synonym=TSPY-M1,TSPY1;gene_id=Cattle_Y_G00941;source_id=gene-TSPY
haplotype2-0000357	CAT	mRNA	49109013	49112207	.	-	.	ID=Cattle_Y_T01646;Parent=Cattle_Y_G00941;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Name=NM_001244608.1;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein%2C Y-linked 1;transcript_id=Cattle_Y_T01646;gene_id=Cattle_Y_G00941;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001244608.1
haplotype2-0000357	CAT	exon	49109013	49109228	.	-	.	ID=Cattle_Y_E03082;Parent=Cattle_Y_T01646;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01646;gene_id=Cattle_Y_G00941;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-7
haplotype2-0000357	CAT	exon	49109948	49110055	.	-	.	ID=Cattle_Y_E03083;Parent=Cattle_Y_T01646;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01646;gene_id=Cattle_Y_G00941;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-6
haplotype2-0000357	CAT	exon	49110172	49110317	.	-	.	ID=Cattle_Y_E03084;Parent=Cattle_Y_T01646;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01646;gene_id=Cattle_Y_G00941;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-5
haplotype2-0000357	CAT	exon	49110413	49110524	.	-	.	ID=Cattle_Y_E03085;Parent=Cattle_Y_T01646;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01646;gene_id=Cattle_Y_G00941;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-4
haplotype2-0000357	CAT	exon	49110708	49110785	.	-	.	ID=Cattle_Y_E03086;Parent=Cattle_Y_T01646;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01646;gene_id=Cattle_Y_G00941;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-3
haplotype2-0000357	CAT	exon	49111572	49111987	.	-	.	ID=Cattle_Y_E03087;Parent=Cattle_Y_T01646;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01646;gene_id=Cattle_Y_G00941;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-2
haplotype2-0000357	CAT	exon	49112084	49112207	.	-	.	ID=Cattle_Y_E03088;Parent=Cattle_Y_T01646;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01646;gene_id=Cattle_Y_G00941;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-1
haplotype2-0000357	CAT	CDS	49109978	49110055	.	-	0	ID=Cattle_Y_C02683;Parent=Cattle_Y_T01646;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_2;gene_id=Cattle_Y_G00941;transcript_id=Cattle_Y_T01646;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49110172	49110317	.	-	2	ID=Cattle_Y_C02684;Parent=Cattle_Y_T01646;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_2;gene_id=Cattle_Y_G00941;transcript_id=Cattle_Y_T01646;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49110413	49110524	.	-	0	ID=Cattle_Y_C02685;Parent=Cattle_Y_T01646;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_2;gene_id=Cattle_Y_G00941;transcript_id=Cattle_Y_T01646;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49110708	49110785	.	-	0	ID=Cattle_Y_C02686;Parent=Cattle_Y_T01646;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_2;gene_id=Cattle_Y_G00941;transcript_id=Cattle_Y_T01646;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49111572	49111987	.	-	2	ID=Cattle_Y_C02687;Parent=Cattle_Y_T01646;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_2;gene_id=Cattle_Y_G00941;transcript_id=Cattle_Y_T01646;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49112084	49112207	.	-	0	ID=Cattle_Y_C02688;Parent=Cattle_Y_T01646;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_2;gene_id=Cattle_Y_G00941;transcript_id=Cattle_Y_T01646;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49116540	49119731	.	-	.	ID=Cattle_Y_G00942;Dbxref=BGD:BT19054,GeneID:281554;Name=TSPY;description=testis specific protein%2C Y-linked 1;gbkey=Gene;gene=TSPY;gene_biotype=protein_coding;gene_synonym=TSPY-M1,TSPY1;gene_id=Cattle_Y_G00942;source_id=gene-TSPY
haplotype2-0000357	CAT	mRNA	49116540	49119731	.	-	.	ID=Cattle_Y_T01647;Parent=Cattle_Y_G00942;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Name=NM_001244608.1;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein%2C Y-linked 1;transcript_id=Cattle_Y_T01647;gene_id=Cattle_Y_G00942;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001244608.1
haplotype2-0000357	CAT	exon	49116540	49116752	.	-	.	ID=Cattle_Y_E03089;Parent=Cattle_Y_T01647;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01647;gene_id=Cattle_Y_G00942;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-7
haplotype2-0000357	CAT	exon	49117472	49117579	.	-	.	ID=Cattle_Y_E03090;Parent=Cattle_Y_T01647;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01647;gene_id=Cattle_Y_G00942;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-6
haplotype2-0000357	CAT	exon	49117696	49117841	.	-	.	ID=Cattle_Y_E03091;Parent=Cattle_Y_T01647;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01647;gene_id=Cattle_Y_G00942;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-5
haplotype2-0000357	CAT	exon	49117937	49118048	.	-	.	ID=Cattle_Y_E03092;Parent=Cattle_Y_T01647;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01647;gene_id=Cattle_Y_G00942;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-4
haplotype2-0000357	CAT	exon	49118232	49118309	.	-	.	ID=Cattle_Y_E03093;Parent=Cattle_Y_T01647;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01647;gene_id=Cattle_Y_G00942;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-3
haplotype2-0000357	CAT	exon	49119096	49119511	.	-	.	ID=Cattle_Y_E03094;Parent=Cattle_Y_T01647;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01647;gene_id=Cattle_Y_G00942;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-2
haplotype2-0000357	CAT	exon	49119608	49119731	.	-	.	ID=Cattle_Y_E03095;Parent=Cattle_Y_T01647;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01647;gene_id=Cattle_Y_G00942;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-1
haplotype2-0000357	CAT	CDS	49117502	49117579	.	-	0	ID=Cattle_Y_C02689;Parent=Cattle_Y_T01647;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_5;gene_id=Cattle_Y_G00942;transcript_id=Cattle_Y_T01647;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49117696	49117841	.	-	2	ID=Cattle_Y_C02690;Parent=Cattle_Y_T01647;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_5;gene_id=Cattle_Y_G00942;transcript_id=Cattle_Y_T01647;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49117937	49118048	.	-	0	ID=Cattle_Y_C02691;Parent=Cattle_Y_T01647;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_5;gene_id=Cattle_Y_G00942;transcript_id=Cattle_Y_T01647;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49118232	49118309	.	-	0	ID=Cattle_Y_C02692;Parent=Cattle_Y_T01647;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_5;gene_id=Cattle_Y_G00942;transcript_id=Cattle_Y_T01647;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49119096	49119511	.	-	2	ID=Cattle_Y_C02693;Parent=Cattle_Y_T01647;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_5;gene_id=Cattle_Y_G00942;transcript_id=Cattle_Y_T01647;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49119608	49119731	.	-	0	ID=Cattle_Y_C02694;Parent=Cattle_Y_T01647;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_5;gene_id=Cattle_Y_G00942;transcript_id=Cattle_Y_T01647;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49125026	49127252	.	-	.	ID=Cattle_Y_G00943;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00943;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	49125026	49127252	.	-	.	ID=Cattle_Y_T01648;Parent=Cattle_Y_G00943;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01648;gene_id=Cattle_Y_G00943;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	49125026	49125103	.	-	.	ID=Cattle_Y_E03096;Parent=Cattle_Y_T01648;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01648;gene_id=Cattle_Y_G00943;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	49125220	49125365	.	-	.	ID=Cattle_Y_E03097;Parent=Cattle_Y_T01648;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01648;gene_id=Cattle_Y_G00943;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	49125461	49125572	.	-	.	ID=Cattle_Y_E03098;Parent=Cattle_Y_T01648;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01648;gene_id=Cattle_Y_G00943;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	49125756	49125833	.	-	.	ID=Cattle_Y_E03099;Parent=Cattle_Y_T01648;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01648;gene_id=Cattle_Y_G00943;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	49126617	49127032	.	-	.	ID=Cattle_Y_E03100;Parent=Cattle_Y_T01648;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01648;gene_id=Cattle_Y_G00943;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	49127129	49127252	.	-	.	ID=Cattle_Y_E03101;Parent=Cattle_Y_T01648;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01648;gene_id=Cattle_Y_G00943;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	49125026	49125103	.	-	0	ID=Cattle_Y_C02695;Parent=Cattle_Y_T01648;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_10;gene_id=Cattle_Y_G00943;transcript_id=Cattle_Y_T01648;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49125220	49125365	.	-	2	ID=Cattle_Y_C02696;Parent=Cattle_Y_T01648;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_10;gene_id=Cattle_Y_G00943;transcript_id=Cattle_Y_T01648;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49125461	49125572	.	-	0	ID=Cattle_Y_C02697;Parent=Cattle_Y_T01648;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_10;gene_id=Cattle_Y_G00943;transcript_id=Cattle_Y_T01648;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49125756	49125833	.	-	0	ID=Cattle_Y_C02698;Parent=Cattle_Y_T01648;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_10;gene_id=Cattle_Y_G00943;transcript_id=Cattle_Y_T01648;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49126617	49127032	.	-	2	ID=Cattle_Y_C02699;Parent=Cattle_Y_T01648;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_10;gene_id=Cattle_Y_G00943;transcript_id=Cattle_Y_T01648;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49127129	49127252	.	-	0	ID=Cattle_Y_C02700;Parent=Cattle_Y_T01648;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_10;gene_id=Cattle_Y_G00943;transcript_id=Cattle_Y_T01648;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49132544	49134770	.	-	.	ID=Cattle_Y_G00944;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00944;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	49132544	49134770	.	-	.	ID=Cattle_Y_T01649;Parent=Cattle_Y_G00944;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01649;gene_id=Cattle_Y_G00944;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	49132544	49132621	.	-	.	ID=Cattle_Y_E03102;Parent=Cattle_Y_T01649;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01649;gene_id=Cattle_Y_G00944;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	49132738	49132883	.	-	.	ID=Cattle_Y_E03103;Parent=Cattle_Y_T01649;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01649;gene_id=Cattle_Y_G00944;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	49132979	49133090	.	-	.	ID=Cattle_Y_E03104;Parent=Cattle_Y_T01649;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01649;gene_id=Cattle_Y_G00944;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	49133274	49133351	.	-	.	ID=Cattle_Y_E03105;Parent=Cattle_Y_T01649;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01649;gene_id=Cattle_Y_G00944;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	49134135	49134550	.	-	.	ID=Cattle_Y_E03106;Parent=Cattle_Y_T01649;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01649;gene_id=Cattle_Y_G00944;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	49134647	49134770	.	-	.	ID=Cattle_Y_E03107;Parent=Cattle_Y_T01649;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01649;gene_id=Cattle_Y_G00944;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	49132544	49132621	.	-	0	ID=Cattle_Y_C02701;Parent=Cattle_Y_T01649;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_9;gene_id=Cattle_Y_G00944;transcript_id=Cattle_Y_T01649;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49132738	49132883	.	-	2	ID=Cattle_Y_C02702;Parent=Cattle_Y_T01649;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_9;gene_id=Cattle_Y_G00944;transcript_id=Cattle_Y_T01649;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49132979	49133090	.	-	0	ID=Cattle_Y_C02703;Parent=Cattle_Y_T01649;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_9;gene_id=Cattle_Y_G00944;transcript_id=Cattle_Y_T01649;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49133274	49133351	.	-	0	ID=Cattle_Y_C02704;Parent=Cattle_Y_T01649;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_9;gene_id=Cattle_Y_G00944;transcript_id=Cattle_Y_T01649;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49134135	49134550	.	-	2	ID=Cattle_Y_C02705;Parent=Cattle_Y_T01649;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_9;gene_id=Cattle_Y_G00944;transcript_id=Cattle_Y_T01649;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49134647	49134770	.	-	0	ID=Cattle_Y_C02706;Parent=Cattle_Y_T01649;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_9;gene_id=Cattle_Y_G00944;transcript_id=Cattle_Y_T01649;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49140063	49142186	.	-	.	ID=Cattle_Y_G00945;Dbxref=GeneID:132344575;Name=LOC132344575;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344575;gene_biotype=protein_coding;partial=true;start_range=.,9228925;gene_id=Cattle_Y_G00945;source_id=gene-LOC132344575
haplotype2-0000357	CAT	mRNA	49140063	49142186	.	-	.	ID=Cattle_Y_T01650;Parent=Cattle_Y_G00945;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;Name=XM_059884240.1;gbkey=mRNA;gene=LOC132344575;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01650;gene_id=Cattle_Y_G00945;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884240.1
haplotype2-0000357	CAT	exon	49140063	49140140	.	-	.	ID=Cattle_Y_E03108;Parent=Cattle_Y_T01650;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01650;gene_id=Cattle_Y_G00945;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-6
haplotype2-0000357	CAT	exon	49140257	49140402	.	-	.	ID=Cattle_Y_E03109;Parent=Cattle_Y_T01650;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01650;gene_id=Cattle_Y_G00945;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-5
haplotype2-0000357	CAT	exon	49140498	49140609	.	-	.	ID=Cattle_Y_E03110;Parent=Cattle_Y_T01650;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01650;gene_id=Cattle_Y_G00945;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-4
haplotype2-0000357	CAT	exon	49140793	49140870	.	-	.	ID=Cattle_Y_E03111;Parent=Cattle_Y_T01650;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01650;gene_id=Cattle_Y_G00945;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-3
haplotype2-0000357	CAT	exon	49141658	49142073	.	-	.	ID=Cattle_Y_E03112;Parent=Cattle_Y_T01650;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01650;gene_id=Cattle_Y_G00945;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-2
haplotype2-0000357	CAT	exon	49142171	49142186	.	-	.	ID=Cattle_Y_E03113;Parent=Cattle_Y_T01650;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01650;gene_id=Cattle_Y_G00945;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-1
haplotype2-0000357	CAT	CDS	49140063	49140140	.	-	0	ID=Cattle_Y_C02707;Parent=Cattle_Y_T01650;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_5;gene_id=Cattle_Y_G00945;transcript_id=Cattle_Y_T01650;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49140257	49140402	.	-	2	ID=Cattle_Y_C02708;Parent=Cattle_Y_T01650;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_5;gene_id=Cattle_Y_G00945;transcript_id=Cattle_Y_T01650;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49140498	49140609	.	-	0	ID=Cattle_Y_C02709;Parent=Cattle_Y_T01650;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_5;gene_id=Cattle_Y_G00945;transcript_id=Cattle_Y_T01650;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49140793	49140870	.	-	0	ID=Cattle_Y_C02710;Parent=Cattle_Y_T01650;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_5;gene_id=Cattle_Y_G00945;transcript_id=Cattle_Y_T01650;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49141658	49142073	.	-	2	ID=Cattle_Y_C02711;Parent=Cattle_Y_T01650;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_5;gene_id=Cattle_Y_G00945;transcript_id=Cattle_Y_T01650;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49142171	49142186	.	-	0	ID=Cattle_Y_C02712;Parent=Cattle_Y_T01650;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_5;start_range=.,9228925;gene_id=Cattle_Y_G00945;transcript_id=Cattle_Y_T01650;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49146626	49149820	.	-	.	ID=Cattle_Y_G00946;Dbxref=BGD:BT19054,GeneID:281554;Name=TSPY;description=testis specific protein%2C Y-linked 1;gbkey=Gene;gene=TSPY;gene_biotype=protein_coding;gene_synonym=TSPY-M1,TSPY1;gene_id=Cattle_Y_G00946;source_id=gene-TSPY
haplotype2-0000357	CAT	mRNA	49146626	49149820	.	-	.	ID=Cattle_Y_T01651;Parent=Cattle_Y_G00946;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Name=NM_001244608.1;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein%2C Y-linked 1;transcript_id=Cattle_Y_T01651;gene_id=Cattle_Y_G00946;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001244608.1
haplotype2-0000357	CAT	exon	49146626	49146841	.	-	.	ID=Cattle_Y_E03114;Parent=Cattle_Y_T01651;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01651;gene_id=Cattle_Y_G00946;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-7
haplotype2-0000357	CAT	exon	49147561	49147668	.	-	.	ID=Cattle_Y_E03115;Parent=Cattle_Y_T01651;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01651;gene_id=Cattle_Y_G00946;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-6
haplotype2-0000357	CAT	exon	49147785	49147930	.	-	.	ID=Cattle_Y_E03116;Parent=Cattle_Y_T01651;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01651;gene_id=Cattle_Y_G00946;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-5
haplotype2-0000357	CAT	exon	49148026	49148137	.	-	.	ID=Cattle_Y_E03117;Parent=Cattle_Y_T01651;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01651;gene_id=Cattle_Y_G00946;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-4
haplotype2-0000357	CAT	exon	49148321	49148398	.	-	.	ID=Cattle_Y_E03118;Parent=Cattle_Y_T01651;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01651;gene_id=Cattle_Y_G00946;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-3
haplotype2-0000357	CAT	exon	49149185	49149600	.	-	.	ID=Cattle_Y_E03119;Parent=Cattle_Y_T01651;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01651;gene_id=Cattle_Y_G00946;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-2
haplotype2-0000357	CAT	exon	49149697	49149820	.	-	.	ID=Cattle_Y_E03120;Parent=Cattle_Y_T01651;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01651;gene_id=Cattle_Y_G00946;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-1
haplotype2-0000357	CAT	CDS	49147591	49147668	.	-	0	ID=Cattle_Y_C02713;Parent=Cattle_Y_T01651;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_6;gene_id=Cattle_Y_G00946;transcript_id=Cattle_Y_T01651;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49147785	49147930	.	-	2	ID=Cattle_Y_C02714;Parent=Cattle_Y_T01651;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_6;gene_id=Cattle_Y_G00946;transcript_id=Cattle_Y_T01651;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49148026	49148137	.	-	0	ID=Cattle_Y_C02715;Parent=Cattle_Y_T01651;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_6;gene_id=Cattle_Y_G00946;transcript_id=Cattle_Y_T01651;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49148321	49148398	.	-	0	ID=Cattle_Y_C02716;Parent=Cattle_Y_T01651;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_6;gene_id=Cattle_Y_G00946;transcript_id=Cattle_Y_T01651;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49149185	49149600	.	-	2	ID=Cattle_Y_C02717;Parent=Cattle_Y_T01651;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_6;gene_id=Cattle_Y_G00946;transcript_id=Cattle_Y_T01651;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49149697	49149820	.	-	0	ID=Cattle_Y_C02718;Parent=Cattle_Y_T01651;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_6;gene_id=Cattle_Y_G00946;transcript_id=Cattle_Y_T01651;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49155117	49157346	1651	-	.	ID=Cattle_Y_G00947;Dbxref=BGD:BT19054,GeneID:281554;Name=TSPY;description=testis specific protein%2C Y-linked 1;gbkey=Gene;gene=TSPY;gene_biotype=protein_coding;gene_synonym=TSPY-M1,TSPY1;gene_id=Cattle_Y_G00947;source_id=gene-TSPY
haplotype2-0000357	CAT	mRNA	49155117	49157346	1651	-	.	ID=Cattle_Y_T01652;Parent=Cattle_Y_G00947;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Name=NM_001244608.1;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein%2C Y-linked 1;transcript_id=Cattle_Y_T01652;gene_id=Cattle_Y_G00947;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001244608.1
haplotype2-0000357	CAT	exon	49155117	49155194	135	-	0	ID=Cattle_Y_E03121;Parent=Cattle_Y_T01652;gene_id=Cattle_Y_G00947;transcript_id=Cattle_Y_T01652;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49155311	49155456	270	-	2	ID=Cattle_Y_E03122;Parent=Cattle_Y_T01652;gene_id=Cattle_Y_G00947;transcript_id=Cattle_Y_T01652;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49155552	49155663	203	-	0	ID=Cattle_Y_E03123;Parent=Cattle_Y_T01652;gene_id=Cattle_Y_G00947;transcript_id=Cattle_Y_T01652;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49155847	49155924	133	-	0	ID=Cattle_Y_E03124;Parent=Cattle_Y_T01652;gene_id=Cattle_Y_G00947;transcript_id=Cattle_Y_T01652;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49156711	49157126	692	-	2	ID=Cattle_Y_E03125;Parent=Cattle_Y_T01652;gene_id=Cattle_Y_G00947;transcript_id=Cattle_Y_T01652;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49157223	49157346	218	-	0	ID=Cattle_Y_E03126;Parent=Cattle_Y_T01652;gene_id=Cattle_Y_G00947;transcript_id=Cattle_Y_T01652;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49155117	49155194	135	-	0	ID=Cattle_Y_C02719;Parent=Cattle_Y_T01652;gene_id=Cattle_Y_G00947;transcript_id=Cattle_Y_T01652;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49155311	49155456	270	-	2	ID=Cattle_Y_C02720;Parent=Cattle_Y_T01652;gene_id=Cattle_Y_G00947;transcript_id=Cattle_Y_T01652;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49155552	49155663	203	-	0	ID=Cattle_Y_C02721;Parent=Cattle_Y_T01652;gene_id=Cattle_Y_G00947;transcript_id=Cattle_Y_T01652;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49155847	49155924	133	-	0	ID=Cattle_Y_C02722;Parent=Cattle_Y_T01652;gene_id=Cattle_Y_G00947;transcript_id=Cattle_Y_T01652;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49156711	49157126	692	-	2	ID=Cattle_Y_C02723;Parent=Cattle_Y_T01652;gene_id=Cattle_Y_G00947;transcript_id=Cattle_Y_T01652;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49157223	49157346	218	-	0	ID=Cattle_Y_C02724;Parent=Cattle_Y_T01652;gene_id=Cattle_Y_G00947;transcript_id=Cattle_Y_T01652;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49162641	49164871	1651	-	.	ID=Cattle_Y_G00948;Dbxref=BGD:BT19054,GeneID:281554;Name=TSPY;description=testis specific protein%2C Y-linked 1;gbkey=Gene;gene=TSPY;gene_biotype=protein_coding;gene_synonym=TSPY-M1,TSPY1;gene_id=Cattle_Y_G00948;source_id=gene-TSPY
haplotype2-0000357	CAT	mRNA	49162641	49164871	1651	-	.	ID=Cattle_Y_T01653;Parent=Cattle_Y_G00948;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Name=NM_001244608.1;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein%2C Y-linked 1;transcript_id=Cattle_Y_T01653;gene_id=Cattle_Y_G00948;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001244608.1
haplotype2-0000357	CAT	exon	49162641	49162718	135	-	0	ID=Cattle_Y_E03127;Parent=Cattle_Y_T01653;gene_id=Cattle_Y_G00948;transcript_id=Cattle_Y_T01653;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49162835	49162980	270	-	2	ID=Cattle_Y_E03128;Parent=Cattle_Y_T01653;gene_id=Cattle_Y_G00948;transcript_id=Cattle_Y_T01653;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49163076	49163187	203	-	0	ID=Cattle_Y_E03129;Parent=Cattle_Y_T01653;gene_id=Cattle_Y_G00948;transcript_id=Cattle_Y_T01653;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49163371	49163448	133	-	0	ID=Cattle_Y_E03130;Parent=Cattle_Y_T01653;gene_id=Cattle_Y_G00948;transcript_id=Cattle_Y_T01653;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49164236	49164651	692	-	2	ID=Cattle_Y_E03131;Parent=Cattle_Y_T01653;gene_id=Cattle_Y_G00948;transcript_id=Cattle_Y_T01653;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49164748	49164871	218	-	0	ID=Cattle_Y_E03132;Parent=Cattle_Y_T01653;gene_id=Cattle_Y_G00948;transcript_id=Cattle_Y_T01653;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49162641	49162718	135	-	0	ID=Cattle_Y_C02725;Parent=Cattle_Y_T01653;gene_id=Cattle_Y_G00948;transcript_id=Cattle_Y_T01653;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49162835	49162980	270	-	2	ID=Cattle_Y_C02726;Parent=Cattle_Y_T01653;gene_id=Cattle_Y_G00948;transcript_id=Cattle_Y_T01653;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49163076	49163187	203	-	0	ID=Cattle_Y_C02727;Parent=Cattle_Y_T01653;gene_id=Cattle_Y_G00948;transcript_id=Cattle_Y_T01653;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49163371	49163448	133	-	0	ID=Cattle_Y_C02728;Parent=Cattle_Y_T01653;gene_id=Cattle_Y_G00948;transcript_id=Cattle_Y_T01653;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49164236	49164651	692	-	2	ID=Cattle_Y_C02729;Parent=Cattle_Y_T01653;gene_id=Cattle_Y_G00948;transcript_id=Cattle_Y_T01653;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49164748	49164871	218	-	0	ID=Cattle_Y_C02730;Parent=Cattle_Y_T01653;gene_id=Cattle_Y_G00948;transcript_id=Cattle_Y_T01653;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49170163	49172418	.	-	.	ID=Cattle_Y_G00949;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00949;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	49170163	49172418	.	-	.	ID=Cattle_Y_T01654;Parent=Cattle_Y_G00949;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01654;gene_id=Cattle_Y_G00949;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	49170163	49170240	.	-	.	ID=Cattle_Y_E03133;Parent=Cattle_Y_T01654;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01654;gene_id=Cattle_Y_G00949;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	49170357	49170502	.	-	.	ID=Cattle_Y_E03134;Parent=Cattle_Y_T01654;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01654;gene_id=Cattle_Y_G00949;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	49170598	49170709	.	-	.	ID=Cattle_Y_E03135;Parent=Cattle_Y_T01654;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01654;gene_id=Cattle_Y_G00949;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	49170893	49170970	.	-	.	ID=Cattle_Y_E03136;Parent=Cattle_Y_T01654;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01654;gene_id=Cattle_Y_G00949;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	49171783	49172198	.	-	.	ID=Cattle_Y_E03137;Parent=Cattle_Y_T01654;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01654;gene_id=Cattle_Y_G00949;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	49172295	49172418	.	-	.	ID=Cattle_Y_E03138;Parent=Cattle_Y_T01654;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01654;gene_id=Cattle_Y_G00949;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	49170163	49170240	.	-	0	ID=Cattle_Y_C02731;Parent=Cattle_Y_T01654;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_2;gene_id=Cattle_Y_G00949;transcript_id=Cattle_Y_T01654;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49170357	49170502	.	-	2	ID=Cattle_Y_C02732;Parent=Cattle_Y_T01654;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_2;gene_id=Cattle_Y_G00949;transcript_id=Cattle_Y_T01654;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49170598	49170709	.	-	0	ID=Cattle_Y_C02733;Parent=Cattle_Y_T01654;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_2;gene_id=Cattle_Y_G00949;transcript_id=Cattle_Y_T01654;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49170893	49170970	.	-	0	ID=Cattle_Y_C02734;Parent=Cattle_Y_T01654;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_2;gene_id=Cattle_Y_G00949;transcript_id=Cattle_Y_T01654;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49171783	49172198	.	-	2	ID=Cattle_Y_C02735;Parent=Cattle_Y_T01654;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_2;gene_id=Cattle_Y_G00949;transcript_id=Cattle_Y_T01654;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49172295	49172418	.	-	0	ID=Cattle_Y_C02736;Parent=Cattle_Y_T01654;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_2;gene_id=Cattle_Y_G00949;transcript_id=Cattle_Y_T01654;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49177575	49179830	.	-	.	ID=Cattle_Y_G00950;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00950;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	49177575	49179830	.	-	.	ID=Cattle_Y_T01655;Parent=Cattle_Y_G00950;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01655;gene_id=Cattle_Y_G00950;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	49177575	49177652	.	-	.	ID=Cattle_Y_E03139;Parent=Cattle_Y_T01655;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01655;gene_id=Cattle_Y_G00950;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	49177769	49177914	.	-	.	ID=Cattle_Y_E03140;Parent=Cattle_Y_T01655;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01655;gene_id=Cattle_Y_G00950;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	49178010	49178121	.	-	.	ID=Cattle_Y_E03141;Parent=Cattle_Y_T01655;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01655;gene_id=Cattle_Y_G00950;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	49178305	49178382	.	-	.	ID=Cattle_Y_E03142;Parent=Cattle_Y_T01655;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01655;gene_id=Cattle_Y_G00950;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	49179195	49179610	.	-	.	ID=Cattle_Y_E03143;Parent=Cattle_Y_T01655;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01655;gene_id=Cattle_Y_G00950;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	49179707	49179830	.	-	.	ID=Cattle_Y_E03144;Parent=Cattle_Y_T01655;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01655;gene_id=Cattle_Y_G00950;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	49177575	49177652	.	-	0	ID=Cattle_Y_C02737;Parent=Cattle_Y_T01655;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_3;gene_id=Cattle_Y_G00950;transcript_id=Cattle_Y_T01655;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49177769	49177914	.	-	2	ID=Cattle_Y_C02738;Parent=Cattle_Y_T01655;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_3;gene_id=Cattle_Y_G00950;transcript_id=Cattle_Y_T01655;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49178010	49178121	.	-	0	ID=Cattle_Y_C02739;Parent=Cattle_Y_T01655;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_3;gene_id=Cattle_Y_G00950;transcript_id=Cattle_Y_T01655;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49178305	49178382	.	-	0	ID=Cattle_Y_C02740;Parent=Cattle_Y_T01655;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_3;gene_id=Cattle_Y_G00950;transcript_id=Cattle_Y_T01655;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49179195	49179610	.	-	2	ID=Cattle_Y_C02741;Parent=Cattle_Y_T01655;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_3;gene_id=Cattle_Y_G00950;transcript_id=Cattle_Y_T01655;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49179707	49179830	.	-	0	ID=Cattle_Y_C02742;Parent=Cattle_Y_T01655;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_3;gene_id=Cattle_Y_G00950;transcript_id=Cattle_Y_T01655;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49184987	49187101	.	-	.	ID=Cattle_Y_G00951;Dbxref=GeneID:132344575;Name=LOC132344575;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344575;gene_biotype=protein_coding;partial=true;start_range=.,9228925;gene_id=Cattle_Y_G00951;source_id=gene-LOC132344575
haplotype2-0000357	CAT	mRNA	49184987	49187101	.	-	.	ID=Cattle_Y_T01656;Parent=Cattle_Y_G00951;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;Name=XM_059884240.1;gbkey=mRNA;gene=LOC132344575;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01656;gene_id=Cattle_Y_G00951;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884240.1
haplotype2-0000357	CAT	exon	49184987	49185064	.	-	.	ID=Cattle_Y_E03145;Parent=Cattle_Y_T01656;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01656;gene_id=Cattle_Y_G00951;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-6
haplotype2-0000357	CAT	exon	49185181	49185326	.	-	.	ID=Cattle_Y_E03146;Parent=Cattle_Y_T01656;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01656;gene_id=Cattle_Y_G00951;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-5
haplotype2-0000357	CAT	exon	49185422	49185533	.	-	.	ID=Cattle_Y_E03147;Parent=Cattle_Y_T01656;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01656;gene_id=Cattle_Y_G00951;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-4
haplotype2-0000357	CAT	exon	49185717	49185794	.	-	.	ID=Cattle_Y_E03148;Parent=Cattle_Y_T01656;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01656;gene_id=Cattle_Y_G00951;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-3
haplotype2-0000357	CAT	exon	49186574	49186989	.	-	.	ID=Cattle_Y_E03149;Parent=Cattle_Y_T01656;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01656;gene_id=Cattle_Y_G00951;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-2
haplotype2-0000357	CAT	exon	49187086	49187101	.	-	.	ID=Cattle_Y_E03150;Parent=Cattle_Y_T01656;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01656;gene_id=Cattle_Y_G00951;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-1
haplotype2-0000357	CAT	CDS	49184987	49185064	.	-	0	ID=Cattle_Y_C02743;Parent=Cattle_Y_T01656;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1;gene_id=Cattle_Y_G00951;transcript_id=Cattle_Y_T01656;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49185181	49185326	.	-	2	ID=Cattle_Y_C02744;Parent=Cattle_Y_T01656;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1;gene_id=Cattle_Y_G00951;transcript_id=Cattle_Y_T01656;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49185422	49185533	.	-	0	ID=Cattle_Y_C02745;Parent=Cattle_Y_T01656;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1;gene_id=Cattle_Y_G00951;transcript_id=Cattle_Y_T01656;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49185717	49185794	.	-	0	ID=Cattle_Y_C02746;Parent=Cattle_Y_T01656;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1;gene_id=Cattle_Y_G00951;transcript_id=Cattle_Y_T01656;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49186574	49186989	.	-	2	ID=Cattle_Y_C02747;Parent=Cattle_Y_T01656;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1;gene_id=Cattle_Y_G00951;transcript_id=Cattle_Y_T01656;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49187086	49187101	.	-	0	ID=Cattle_Y_C02748;Parent=Cattle_Y_T01656;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1;start_range=.,9228925;gene_id=Cattle_Y_G00951;transcript_id=Cattle_Y_T01656;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49192368	49194482	.	-	.	ID=Cattle_Y_G00952;Dbxref=GeneID:132344576;Name=LOC132344576;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344576;gene_biotype=protein_coding;partial=true;start_range=.,9236322;gene_id=Cattle_Y_G00952;source_id=gene-LOC132344576
haplotype2-0000357	CAT	mRNA	49192368	49194482	.	-	.	ID=Cattle_Y_T01657;Parent=Cattle_Y_G00952;Dbxref=GeneID:132344576,GenBank:XM_059884241.1;Name=XM_059884241.1;gbkey=mRNA;gene=LOC132344576;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9236322;transcript_id=Cattle_Y_T01657;gene_id=Cattle_Y_G00952;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884241.1
haplotype2-0000357	CAT	exon	49192368	49192445	.	-	.	ID=Cattle_Y_E03151;Parent=Cattle_Y_T01657;Dbxref=GeneID:132344576,GenBank:XM_059884241.1;gbkey=mRNA;gene=LOC132344576;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01657;gene_id=Cattle_Y_G00952;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884241.1-6
haplotype2-0000357	CAT	exon	49192562	49192707	.	-	.	ID=Cattle_Y_E03152;Parent=Cattle_Y_T01657;Dbxref=GeneID:132344576,GenBank:XM_059884241.1;gbkey=mRNA;gene=LOC132344576;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01657;gene_id=Cattle_Y_G00952;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884241.1-5
haplotype2-0000357	CAT	exon	49192803	49192914	.	-	.	ID=Cattle_Y_E03153;Parent=Cattle_Y_T01657;Dbxref=GeneID:132344576,GenBank:XM_059884241.1;gbkey=mRNA;gene=LOC132344576;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01657;gene_id=Cattle_Y_G00952;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884241.1-4
haplotype2-0000357	CAT	exon	49193098	49193175	.	-	.	ID=Cattle_Y_E03154;Parent=Cattle_Y_T01657;Dbxref=GeneID:132344576,GenBank:XM_059884241.1;gbkey=mRNA;gene=LOC132344576;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01657;gene_id=Cattle_Y_G00952;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884241.1-3
haplotype2-0000357	CAT	exon	49193955	49194370	.	-	.	ID=Cattle_Y_E03155;Parent=Cattle_Y_T01657;Dbxref=GeneID:132344576,GenBank:XM_059884241.1;gbkey=mRNA;gene=LOC132344576;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01657;gene_id=Cattle_Y_G00952;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884241.1-2
haplotype2-0000357	CAT	exon	49194467	49194482	.	-	.	ID=Cattle_Y_E03156;Parent=Cattle_Y_T01657;Dbxref=GeneID:132344576,GenBank:XM_059884241.1;gbkey=mRNA;gene=LOC132344576;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9236322;transcript_id=Cattle_Y_T01657;gene_id=Cattle_Y_G00952;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884241.1-1
haplotype2-0000357	CAT	CDS	49192368	49192445	.	-	0	ID=Cattle_Y_C02749;Parent=Cattle_Y_T01657;Dbxref=GeneID:132344576,GenBank:XP_059740224.1;Name=XP_059740224.1;gbkey=CDS;gene=LOC132344576;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740224.1;gene_id=Cattle_Y_G00952;transcript_id=Cattle_Y_T01657;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49192562	49192707	.	-	2	ID=Cattle_Y_C02750;Parent=Cattle_Y_T01657;Dbxref=GeneID:132344576,GenBank:XP_059740224.1;Name=XP_059740224.1;gbkey=CDS;gene=LOC132344576;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740224.1;gene_id=Cattle_Y_G00952;transcript_id=Cattle_Y_T01657;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49192803	49192914	.	-	0	ID=Cattle_Y_C02751;Parent=Cattle_Y_T01657;Dbxref=GeneID:132344576,GenBank:XP_059740224.1;Name=XP_059740224.1;gbkey=CDS;gene=LOC132344576;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740224.1;gene_id=Cattle_Y_G00952;transcript_id=Cattle_Y_T01657;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49193098	49193175	.	-	0	ID=Cattle_Y_C02752;Parent=Cattle_Y_T01657;Dbxref=GeneID:132344576,GenBank:XP_059740224.1;Name=XP_059740224.1;gbkey=CDS;gene=LOC132344576;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740224.1;gene_id=Cattle_Y_G00952;transcript_id=Cattle_Y_T01657;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49193955	49194370	.	-	2	ID=Cattle_Y_C02753;Parent=Cattle_Y_T01657;Dbxref=GeneID:132344576,GenBank:XP_059740224.1;Name=XP_059740224.1;gbkey=CDS;gene=LOC132344576;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740224.1;gene_id=Cattle_Y_G00952;transcript_id=Cattle_Y_T01657;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49194467	49194482	.	-	0	ID=Cattle_Y_C02754;Parent=Cattle_Y_T01657;Dbxref=GeneID:132344576,GenBank:XP_059740224.1;Name=XP_059740224.1;gbkey=CDS;gene=LOC132344576;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740224.1;start_range=.,9236322;gene_id=Cattle_Y_G00952;transcript_id=Cattle_Y_T01657;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49199745	49201967	.	-	.	ID=Cattle_Y_G00953;Dbxref=GeneID:132344572;Name=LOC132344572;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344572;gene_biotype=protein_coding;gene_id=Cattle_Y_G00953;source_id=gene-LOC132344572
haplotype2-0000357	CAT	mRNA	49199745	49201967	.	-	.	ID=Cattle_Y_T01658;Parent=Cattle_Y_G00953;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;Name=XM_059884237.1;gbkey=mRNA;gene=LOC132344572;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 7%25 coverage of the annotated genomic feature by RNAseq alignments;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01658;gene_id=Cattle_Y_G00953;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884237.1
haplotype2-0000357	CAT	exon	49199745	49199822	.	-	.	ID=Cattle_Y_E03157;Parent=Cattle_Y_T01658;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01658;gene_id=Cattle_Y_G00953;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-6
haplotype2-0000357	CAT	exon	49199939	49200084	.	-	.	ID=Cattle_Y_E03158;Parent=Cattle_Y_T01658;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01658;gene_id=Cattle_Y_G00953;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-5
haplotype2-0000357	CAT	exon	49200180	49200291	.	-	.	ID=Cattle_Y_E03159;Parent=Cattle_Y_T01658;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01658;gene_id=Cattle_Y_G00953;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-4
haplotype2-0000357	CAT	exon	49200475	49200552	.	-	.	ID=Cattle_Y_E03160;Parent=Cattle_Y_T01658;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01658;gene_id=Cattle_Y_G00953;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-3
haplotype2-0000357	CAT	exon	49201332	49201747	.	-	.	ID=Cattle_Y_E03161;Parent=Cattle_Y_T01658;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01658;gene_id=Cattle_Y_G00953;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-2
haplotype2-0000357	CAT	exon	49201844	49201967	.	-	.	ID=Cattle_Y_E03162;Parent=Cattle_Y_T01658;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01658;gene_id=Cattle_Y_G00953;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-1
haplotype2-0000357	CAT	CDS	49199745	49199822	.	-	0	ID=Cattle_Y_C02755;Parent=Cattle_Y_T01658;Dbxref=GeneID:132344572,GenBank:XP_059740220.1;Name=XP_059740220.1;gbkey=CDS;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740220.1;gene_id=Cattle_Y_G00953;transcript_id=Cattle_Y_T01658;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49199939	49200084	.	-	2	ID=Cattle_Y_C02756;Parent=Cattle_Y_T01658;Dbxref=GeneID:132344572,GenBank:XP_059740220.1;Name=XP_059740220.1;gbkey=CDS;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740220.1;gene_id=Cattle_Y_G00953;transcript_id=Cattle_Y_T01658;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49200180	49200291	.	-	0	ID=Cattle_Y_C02757;Parent=Cattle_Y_T01658;Dbxref=GeneID:132344572,GenBank:XP_059740220.1;Name=XP_059740220.1;gbkey=CDS;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740220.1;gene_id=Cattle_Y_G00953;transcript_id=Cattle_Y_T01658;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49200475	49200552	.	-	0	ID=Cattle_Y_C02758;Parent=Cattle_Y_T01658;Dbxref=GeneID:132344572,GenBank:XP_059740220.1;Name=XP_059740220.1;gbkey=CDS;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740220.1;gene_id=Cattle_Y_G00953;transcript_id=Cattle_Y_T01658;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49201332	49201747	.	-	2	ID=Cattle_Y_C02759;Parent=Cattle_Y_T01658;Dbxref=GeneID:132344572,GenBank:XP_059740220.1;Name=XP_059740220.1;gbkey=CDS;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740220.1;gene_id=Cattle_Y_G00953;transcript_id=Cattle_Y_T01658;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49201844	49201967	.	-	0	ID=Cattle_Y_C02760;Parent=Cattle_Y_T01658;Dbxref=GeneID:132344572,GenBank:XP_059740220.1;Name=XP_059740220.1;gbkey=CDS;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740220.1;gene_id=Cattle_Y_G00953;transcript_id=Cattle_Y_T01658;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49207122	49209344	.	-	.	ID=Cattle_Y_G00954;Dbxref=GeneID:132344582;Name=LOC132344582;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344582;gene_biotype=protein_coding;gene_id=Cattle_Y_G00954;source_id=gene-LOC132344582
haplotype2-0000357	CAT	mRNA	49207122	49209344	.	-	.	ID=Cattle_Y_T01659;Parent=Cattle_Y_G00954;Dbxref=GeneID:132344582,GenBank:XM_059884248.1;Name=XM_059884248.1;gbkey=mRNA;gene=LOC132344582;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01659;gene_id=Cattle_Y_G00954;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884248.1
haplotype2-0000357	CAT	exon	49207122	49207199	.	-	.	ID=Cattle_Y_E03163;Parent=Cattle_Y_T01659;Dbxref=GeneID:132344582,GenBank:XM_059884248.1;gbkey=mRNA;gene=LOC132344582;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01659;gene_id=Cattle_Y_G00954;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884248.1-6
haplotype2-0000357	CAT	exon	49207316	49207461	.	-	.	ID=Cattle_Y_E03164;Parent=Cattle_Y_T01659;Dbxref=GeneID:132344582,GenBank:XM_059884248.1;gbkey=mRNA;gene=LOC132344582;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01659;gene_id=Cattle_Y_G00954;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884248.1-6
haplotype2-0000357	CAT	exon	49207557	49207668	.	-	.	ID=Cattle_Y_E03165;Parent=Cattle_Y_T01659;Dbxref=GeneID:132344582,GenBank:XM_059884248.1;gbkey=mRNA;gene=LOC132344582;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01659;gene_id=Cattle_Y_G00954;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884248.1-6
haplotype2-0000357	CAT	exon	49207852	49207929	.	-	.	ID=Cattle_Y_E03166;Parent=Cattle_Y_T01659;Dbxref=GeneID:132344582,GenBank:XM_059884248.1;gbkey=mRNA;gene=LOC132344582;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01659;gene_id=Cattle_Y_G00954;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884248.1-6
haplotype2-0000357	CAT	exon	49208709	49209124	.	-	.	ID=Cattle_Y_E03167;Parent=Cattle_Y_T01659;Dbxref=GeneID:132344582,GenBank:XM_059884248.1;gbkey=mRNA;gene=LOC132344582;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01659;gene_id=Cattle_Y_G00954;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884248.1-6
haplotype2-0000357	CAT	exon	49209221	49209344	.	-	.	ID=Cattle_Y_E03168;Parent=Cattle_Y_T01659;Dbxref=GeneID:132344582,GenBank:XM_059884248.1;gbkey=mRNA;gene=LOC132344582;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01659;gene_id=Cattle_Y_G00954;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884248.1-1
haplotype2-0000357	CAT	CDS	49207122	49207199	.	-	0	ID=Cattle_Y_C02761;Parent=Cattle_Y_T01659;gene_id=Cattle_Y_G00954;transcript_id=Cattle_Y_T01659;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49207316	49207461	.	-	2	ID=Cattle_Y_C02762;Parent=Cattle_Y_T01659;gene_id=Cattle_Y_G00954;transcript_id=Cattle_Y_T01659;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49207557	49207668	.	-	0	ID=Cattle_Y_C02763;Parent=Cattle_Y_T01659;gene_id=Cattle_Y_G00954;transcript_id=Cattle_Y_T01659;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49207852	49207929	.	-	0	ID=Cattle_Y_C02764;Parent=Cattle_Y_T01659;gene_id=Cattle_Y_G00954;transcript_id=Cattle_Y_T01659;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49208709	49209124	.	-	2	ID=Cattle_Y_C02765;Parent=Cattle_Y_T01659;gene_id=Cattle_Y_G00954;transcript_id=Cattle_Y_T01659;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49209221	49209344	.	-	0	ID=Cattle_Y_C02766;Parent=Cattle_Y_T01659;gene_id=Cattle_Y_G00954;transcript_id=Cattle_Y_T01659;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49214499	49216721	.	-	.	ID=Cattle_Y_G00955;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00955;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	49214499	49216721	.	-	.	ID=Cattle_Y_T01660;Parent=Cattle_Y_G00955;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01660;gene_id=Cattle_Y_G00955;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	49214499	49214576	.	-	.	ID=Cattle_Y_E03169;Parent=Cattle_Y_T01660;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01660;gene_id=Cattle_Y_G00955;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	49214693	49214838	.	-	.	ID=Cattle_Y_E03170;Parent=Cattle_Y_T01660;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01660;gene_id=Cattle_Y_G00955;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	49214934	49215045	.	-	.	ID=Cattle_Y_E03171;Parent=Cattle_Y_T01660;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01660;gene_id=Cattle_Y_G00955;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	49215229	49215306	.	-	.	ID=Cattle_Y_E03172;Parent=Cattle_Y_T01660;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01660;gene_id=Cattle_Y_G00955;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	49216086	49216501	.	-	.	ID=Cattle_Y_E03173;Parent=Cattle_Y_T01660;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01660;gene_id=Cattle_Y_G00955;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	49216598	49216721	.	-	.	ID=Cattle_Y_E03174;Parent=Cattle_Y_T01660;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01660;gene_id=Cattle_Y_G00955;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	49214499	49214576	.	-	0	ID=Cattle_Y_C02767;Parent=Cattle_Y_T01660;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_18;gene_id=Cattle_Y_G00955;transcript_id=Cattle_Y_T01660;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49214693	49214838	.	-	2	ID=Cattle_Y_C02768;Parent=Cattle_Y_T01660;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_18;gene_id=Cattle_Y_G00955;transcript_id=Cattle_Y_T01660;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49214934	49215045	.	-	0	ID=Cattle_Y_C02769;Parent=Cattle_Y_T01660;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_18;gene_id=Cattle_Y_G00955;transcript_id=Cattle_Y_T01660;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49215229	49215306	.	-	0	ID=Cattle_Y_C02770;Parent=Cattle_Y_T01660;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_18;gene_id=Cattle_Y_G00955;transcript_id=Cattle_Y_T01660;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49216086	49216501	.	-	2	ID=Cattle_Y_C02771;Parent=Cattle_Y_T01660;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_18;gene_id=Cattle_Y_G00955;transcript_id=Cattle_Y_T01660;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49216598	49216721	.	-	0	ID=Cattle_Y_C02772;Parent=Cattle_Y_T01660;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_18;gene_id=Cattle_Y_G00955;transcript_id=Cattle_Y_T01660;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49221876	49223990	.	-	.	ID=Cattle_Y_G00956;Dbxref=GeneID:132344574;Name=LOC132344574;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344574;gene_biotype=protein_coding;partial=true;start_range=.,9199421;gene_id=Cattle_Y_G00956;source_id=gene-LOC132344574
haplotype2-0000357	CAT	mRNA	49221876	49223990	.	-	.	ID=Cattle_Y_T01661;Parent=Cattle_Y_G00956;Dbxref=GeneID:132344574,GenBank:XM_059884239.1;Name=XM_059884239.1;gbkey=mRNA;gene=LOC132344574;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9199421;transcript_id=Cattle_Y_T01661;gene_id=Cattle_Y_G00956;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884239.1
haplotype2-0000357	CAT	exon	49221876	49221953	.	-	.	ID=Cattle_Y_E03175;Parent=Cattle_Y_T01661;Dbxref=GeneID:132344574,GenBank:XM_059884239.1;gbkey=mRNA;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01661;gene_id=Cattle_Y_G00956;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884239.1-6
haplotype2-0000357	CAT	exon	49222070	49222215	.	-	.	ID=Cattle_Y_E03176;Parent=Cattle_Y_T01661;Dbxref=GeneID:132344574,GenBank:XM_059884239.1;gbkey=mRNA;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01661;gene_id=Cattle_Y_G00956;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884239.1-5
haplotype2-0000357	CAT	exon	49222311	49222422	.	-	.	ID=Cattle_Y_E03177;Parent=Cattle_Y_T01661;Dbxref=GeneID:132344574,GenBank:XM_059884239.1;gbkey=mRNA;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01661;gene_id=Cattle_Y_G00956;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884239.1-4
haplotype2-0000357	CAT	exon	49222606	49222683	.	-	.	ID=Cattle_Y_E03178;Parent=Cattle_Y_T01661;Dbxref=GeneID:132344574,GenBank:XM_059884239.1;gbkey=mRNA;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01661;gene_id=Cattle_Y_G00956;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884239.1-3
haplotype2-0000357	CAT	exon	49223463	49223878	.	-	.	ID=Cattle_Y_E03179;Parent=Cattle_Y_T01661;Dbxref=GeneID:132344574,GenBank:XM_059884239.1;gbkey=mRNA;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01661;gene_id=Cattle_Y_G00956;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884239.1-2
haplotype2-0000357	CAT	exon	49223975	49223990	.	-	.	ID=Cattle_Y_E03180;Parent=Cattle_Y_T01661;Dbxref=GeneID:132344574,GenBank:XM_059884239.1;gbkey=mRNA;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9199421;transcript_id=Cattle_Y_T01661;gene_id=Cattle_Y_G00956;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884239.1-1
haplotype2-0000357	CAT	CDS	49221876	49221953	.	-	0	ID=Cattle_Y_C02773;Parent=Cattle_Y_T01661;Dbxref=GeneID:132344574,GenBank:XP_059740222.1;Name=XP_059740222.1;gbkey=CDS;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740222.1_2;gene_id=Cattle_Y_G00956;transcript_id=Cattle_Y_T01661;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49222070	49222215	.	-	2	ID=Cattle_Y_C02774;Parent=Cattle_Y_T01661;Dbxref=GeneID:132344574,GenBank:XP_059740222.1;Name=XP_059740222.1;gbkey=CDS;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740222.1_2;gene_id=Cattle_Y_G00956;transcript_id=Cattle_Y_T01661;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49222311	49222422	.	-	0	ID=Cattle_Y_C02775;Parent=Cattle_Y_T01661;Dbxref=GeneID:132344574,GenBank:XP_059740222.1;Name=XP_059740222.1;gbkey=CDS;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740222.1_2;gene_id=Cattle_Y_G00956;transcript_id=Cattle_Y_T01661;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49222606	49222683	.	-	0	ID=Cattle_Y_C02776;Parent=Cattle_Y_T01661;Dbxref=GeneID:132344574,GenBank:XP_059740222.1;Name=XP_059740222.1;gbkey=CDS;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740222.1_2;gene_id=Cattle_Y_G00956;transcript_id=Cattle_Y_T01661;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49223463	49223878	.	-	2	ID=Cattle_Y_C02777;Parent=Cattle_Y_T01661;Dbxref=GeneID:132344574,GenBank:XP_059740222.1;Name=XP_059740222.1;gbkey=CDS;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740222.1_2;gene_id=Cattle_Y_G00956;transcript_id=Cattle_Y_T01661;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49223975	49223990	.	-	0	ID=Cattle_Y_C02778;Parent=Cattle_Y_T01661;Dbxref=GeneID:132344574,GenBank:XP_059740222.1;Name=XP_059740222.1;gbkey=CDS;gene=LOC132344574;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740222.1_2;start_range=.,9199421;gene_id=Cattle_Y_G00956;transcript_id=Cattle_Y_T01661;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49235953	49239140	.	-	.	ID=Cattle_Y_G00957;Dbxref=BGD:BT19054,GeneID:281554;Name=TSPY;description=testis specific protein%2C Y-linked 1;gbkey=Gene;gene=TSPY;gene_biotype=protein_coding;gene_synonym=TSPY-M1,TSPY1;gene_id=Cattle_Y_G00957;source_id=gene-TSPY
haplotype2-0000357	CAT	mRNA	49235953	49239140	.	-	.	ID=Cattle_Y_T01662;Parent=Cattle_Y_G00957;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Name=NM_001244608.1;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein%2C Y-linked 1;transcript_id=Cattle_Y_T01662;gene_id=Cattle_Y_G00957;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001244608.1
haplotype2-0000357	CAT	exon	49235953	49236168	.	-	.	ID=Cattle_Y_E03181;Parent=Cattle_Y_T01662;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01662;gene_id=Cattle_Y_G00957;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-7
haplotype2-0000357	CAT	exon	49236888	49236995	.	-	.	ID=Cattle_Y_E03182;Parent=Cattle_Y_T01662;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01662;gene_id=Cattle_Y_G00957;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-6
haplotype2-0000357	CAT	exon	49237112	49237257	.	-	.	ID=Cattle_Y_E03183;Parent=Cattle_Y_T01662;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01662;gene_id=Cattle_Y_G00957;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-5
haplotype2-0000357	CAT	exon	49237353	49237464	.	-	.	ID=Cattle_Y_E03184;Parent=Cattle_Y_T01662;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01662;gene_id=Cattle_Y_G00957;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-4
haplotype2-0000357	CAT	exon	49237648	49237725	.	-	.	ID=Cattle_Y_E03185;Parent=Cattle_Y_T01662;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01662;gene_id=Cattle_Y_G00957;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-3
haplotype2-0000357	CAT	exon	49238504	49238919	.	-	.	ID=Cattle_Y_E03186;Parent=Cattle_Y_T01662;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01662;gene_id=Cattle_Y_G00957;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-2
haplotype2-0000357	CAT	exon	49239017	49239140	.	-	.	ID=Cattle_Y_E03187;Parent=Cattle_Y_T01662;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01662;gene_id=Cattle_Y_G00957;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-1
haplotype2-0000357	CAT	CDS	49236918	49236995	.	-	0	ID=Cattle_Y_C02779;Parent=Cattle_Y_T01662;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_12;gene_id=Cattle_Y_G00957;transcript_id=Cattle_Y_T01662;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49237112	49237257	.	-	2	ID=Cattle_Y_C02780;Parent=Cattle_Y_T01662;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_12;gene_id=Cattle_Y_G00957;transcript_id=Cattle_Y_T01662;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49237353	49237464	.	-	0	ID=Cattle_Y_C02781;Parent=Cattle_Y_T01662;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_12;gene_id=Cattle_Y_G00957;transcript_id=Cattle_Y_T01662;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49237648	49237725	.	-	0	ID=Cattle_Y_C02782;Parent=Cattle_Y_T01662;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_12;gene_id=Cattle_Y_G00957;transcript_id=Cattle_Y_T01662;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49238504	49238919	.	-	2	ID=Cattle_Y_C02783;Parent=Cattle_Y_T01662;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_12;gene_id=Cattle_Y_G00957;transcript_id=Cattle_Y_T01662;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49239017	49239140	.	-	0	ID=Cattle_Y_C02784;Parent=Cattle_Y_T01662;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_12;gene_id=Cattle_Y_G00957;transcript_id=Cattle_Y_T01662;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49259474	49261694	1643	-	.	ID=Cattle_Y_G00958;Dbxref=GeneID:132344572;Name=LOC132344572;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344572;gene_biotype=protein_coding;gene_id=Cattle_Y_G00958;source_id=gene-LOC132344572
haplotype2-0000357	CAT	mRNA	49259474	49261694	1643	-	.	ID=Cattle_Y_T01663;Parent=Cattle_Y_G00958;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;Name=XM_059884237.1;gbkey=mRNA;gene=LOC132344572;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 7%25 coverage of the annotated genomic feature by RNAseq alignments;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01663;gene_id=Cattle_Y_G00958;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884237.1
haplotype2-0000357	CAT	exon	49259474	49259551	135	-	0	ID=Cattle_Y_E03188;Parent=Cattle_Y_T01663;gene_id=Cattle_Y_G00958;transcript_id=Cattle_Y_T01663;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49259668	49259813	262	-	2	ID=Cattle_Y_E03189;Parent=Cattle_Y_T01663;gene_id=Cattle_Y_G00958;transcript_id=Cattle_Y_T01663;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49259909	49260020	203	-	0	ID=Cattle_Y_E03190;Parent=Cattle_Y_T01663;gene_id=Cattle_Y_G00958;transcript_id=Cattle_Y_T01663;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49260204	49260281	133	-	0	ID=Cattle_Y_E03191;Parent=Cattle_Y_T01663;gene_id=Cattle_Y_G00958;transcript_id=Cattle_Y_T01663;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49261058	49261473	692	-	2	ID=Cattle_Y_E03192;Parent=Cattle_Y_T01663;gene_id=Cattle_Y_G00958;transcript_id=Cattle_Y_T01663;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49261571	49261694	218	-	0	ID=Cattle_Y_E03193;Parent=Cattle_Y_T01663;gene_id=Cattle_Y_G00958;transcript_id=Cattle_Y_T01663;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49259474	49259551	135	-	0	ID=Cattle_Y_C02785;Parent=Cattle_Y_T01663;gene_id=Cattle_Y_G00958;transcript_id=Cattle_Y_T01663;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49259668	49259813	262	-	2	ID=Cattle_Y_C02786;Parent=Cattle_Y_T01663;gene_id=Cattle_Y_G00958;transcript_id=Cattle_Y_T01663;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49259909	49260020	203	-	0	ID=Cattle_Y_C02787;Parent=Cattle_Y_T01663;gene_id=Cattle_Y_G00958;transcript_id=Cattle_Y_T01663;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49260204	49260281	133	-	0	ID=Cattle_Y_C02788;Parent=Cattle_Y_T01663;gene_id=Cattle_Y_G00958;transcript_id=Cattle_Y_T01663;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49261058	49261473	692	-	2	ID=Cattle_Y_C02789;Parent=Cattle_Y_T01663;gene_id=Cattle_Y_G00958;transcript_id=Cattle_Y_T01663;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49261571	49261694	218	-	0	ID=Cattle_Y_C02790;Parent=Cattle_Y_T01663;gene_id=Cattle_Y_G00958;transcript_id=Cattle_Y_T01663;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49282025	49284245	1651	-	.	ID=Cattle_Y_G00959;Dbxref=BGD:BT19054,GeneID:281554;Name=TSPY;description=testis specific protein%2C Y-linked 1;gbkey=Gene;gene=TSPY;gene_biotype=protein_coding;gene_synonym=TSPY-M1,TSPY1;gene_id=Cattle_Y_G00959;source_id=gene-TSPY
haplotype2-0000357	CAT	mRNA	49282025	49284245	1651	-	.	ID=Cattle_Y_T01664;Parent=Cattle_Y_G00959;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Name=NM_001244608.1;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein%2C Y-linked 1;transcript_id=Cattle_Y_T01664;gene_id=Cattle_Y_G00959;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001244608.1
haplotype2-0000357	CAT	exon	49282025	49282102	135	-	0	ID=Cattle_Y_E03194;Parent=Cattle_Y_T01664;gene_id=Cattle_Y_G00959;transcript_id=Cattle_Y_T01664;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49282219	49282364	270	-	2	ID=Cattle_Y_E03195;Parent=Cattle_Y_T01664;gene_id=Cattle_Y_G00959;transcript_id=Cattle_Y_T01664;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49282460	49282571	203	-	0	ID=Cattle_Y_E03196;Parent=Cattle_Y_T01664;gene_id=Cattle_Y_G00959;transcript_id=Cattle_Y_T01664;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49282755	49282832	133	-	0	ID=Cattle_Y_E03197;Parent=Cattle_Y_T01664;gene_id=Cattle_Y_G00959;transcript_id=Cattle_Y_T01664;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49283609	49284024	692	-	2	ID=Cattle_Y_E03198;Parent=Cattle_Y_T01664;gene_id=Cattle_Y_G00959;transcript_id=Cattle_Y_T01664;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49284122	49284245	218	-	0	ID=Cattle_Y_E03199;Parent=Cattle_Y_T01664;gene_id=Cattle_Y_G00959;transcript_id=Cattle_Y_T01664;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49282025	49282102	135	-	0	ID=Cattle_Y_C02791;Parent=Cattle_Y_T01664;gene_id=Cattle_Y_G00959;transcript_id=Cattle_Y_T01664;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49282219	49282364	270	-	2	ID=Cattle_Y_C02792;Parent=Cattle_Y_T01664;gene_id=Cattle_Y_G00959;transcript_id=Cattle_Y_T01664;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49282460	49282571	203	-	0	ID=Cattle_Y_C02793;Parent=Cattle_Y_T01664;gene_id=Cattle_Y_G00959;transcript_id=Cattle_Y_T01664;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49282755	49282832	133	-	0	ID=Cattle_Y_C02794;Parent=Cattle_Y_T01664;gene_id=Cattle_Y_G00959;transcript_id=Cattle_Y_T01664;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49283609	49284024	692	-	2	ID=Cattle_Y_C02795;Parent=Cattle_Y_T01664;gene_id=Cattle_Y_G00959;transcript_id=Cattle_Y_T01664;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49284122	49284245	218	-	0	ID=Cattle_Y_C02796;Parent=Cattle_Y_T01664;gene_id=Cattle_Y_G00959;transcript_id=Cattle_Y_T01664;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49297058	49299396	1651	-	.	ID=Cattle_Y_G00960;Dbxref=BGD:BT19054,GeneID:281554;Name=TSPY;description=testis specific protein%2C Y-linked 1;gbkey=Gene;gene=TSPY;gene_biotype=protein_coding;gene_synonym=TSPY-M1,TSPY1;gene_id=Cattle_Y_G00960;source_id=gene-TSPY
haplotype2-0000357	CAT	mRNA	49297058	49299396	1651	-	.	ID=Cattle_Y_T01665;Parent=Cattle_Y_G00960;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Name=NM_001244608.1;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein%2C Y-linked 1;transcript_id=Cattle_Y_T01665;gene_id=Cattle_Y_G00960;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001244608.1
haplotype2-0000357	CAT	exon	49297058	49297135	135	-	0	ID=Cattle_Y_E03200;Parent=Cattle_Y_T01665;gene_id=Cattle_Y_G00960;transcript_id=Cattle_Y_T01665;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49297252	49297397	270	-	2	ID=Cattle_Y_E03201;Parent=Cattle_Y_T01665;gene_id=Cattle_Y_G00960;transcript_id=Cattle_Y_T01665;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49297493	49297604	203	-	0	ID=Cattle_Y_E03202;Parent=Cattle_Y_T01665;gene_id=Cattle_Y_G00960;transcript_id=Cattle_Y_T01665;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49297788	49297865	133	-	0	ID=Cattle_Y_E03203;Parent=Cattle_Y_T01665;gene_id=Cattle_Y_G00960;transcript_id=Cattle_Y_T01665;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49298761	49299176	692	-	2	ID=Cattle_Y_E03204;Parent=Cattle_Y_T01665;gene_id=Cattle_Y_G00960;transcript_id=Cattle_Y_T01665;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49299273	49299396	218	-	0	ID=Cattle_Y_E03205;Parent=Cattle_Y_T01665;gene_id=Cattle_Y_G00960;transcript_id=Cattle_Y_T01665;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49297058	49297135	135	-	0	ID=Cattle_Y_C02797;Parent=Cattle_Y_T01665;gene_id=Cattle_Y_G00960;transcript_id=Cattle_Y_T01665;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49297252	49297397	270	-	2	ID=Cattle_Y_C02798;Parent=Cattle_Y_T01665;gene_id=Cattle_Y_G00960;transcript_id=Cattle_Y_T01665;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49297493	49297604	203	-	0	ID=Cattle_Y_C02799;Parent=Cattle_Y_T01665;gene_id=Cattle_Y_G00960;transcript_id=Cattle_Y_T01665;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49297788	49297865	133	-	0	ID=Cattle_Y_C02800;Parent=Cattle_Y_T01665;gene_id=Cattle_Y_G00960;transcript_id=Cattle_Y_T01665;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49298761	49299176	692	-	2	ID=Cattle_Y_C02801;Parent=Cattle_Y_T01665;gene_id=Cattle_Y_G00960;transcript_id=Cattle_Y_T01665;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49299273	49299396	218	-	0	ID=Cattle_Y_C02802;Parent=Cattle_Y_T01665;gene_id=Cattle_Y_G00960;transcript_id=Cattle_Y_T01665;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49304695	49307033	1651	-	.	ID=Cattle_Y_G00961;Dbxref=BGD:BT19054,GeneID:281554;Name=TSPY;description=testis specific protein%2C Y-linked 1;gbkey=Gene;gene=TSPY;gene_biotype=protein_coding;gene_synonym=TSPY-M1,TSPY1;gene_id=Cattle_Y_G00961;source_id=gene-TSPY
haplotype2-0000357	CAT	mRNA	49304695	49307033	1651	-	.	ID=Cattle_Y_T01666;Parent=Cattle_Y_G00961;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Name=NM_001244608.1;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein%2C Y-linked 1;transcript_id=Cattle_Y_T01666;gene_id=Cattle_Y_G00961;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001244608.1
haplotype2-0000357	CAT	exon	49304695	49304772	135	-	0	ID=Cattle_Y_E03206;Parent=Cattle_Y_T01666;gene_id=Cattle_Y_G00961;transcript_id=Cattle_Y_T01666;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49304889	49305034	270	-	2	ID=Cattle_Y_E03207;Parent=Cattle_Y_T01666;gene_id=Cattle_Y_G00961;transcript_id=Cattle_Y_T01666;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49305130	49305241	203	-	0	ID=Cattle_Y_E03208;Parent=Cattle_Y_T01666;gene_id=Cattle_Y_G00961;transcript_id=Cattle_Y_T01666;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49305425	49305502	133	-	0	ID=Cattle_Y_E03209;Parent=Cattle_Y_T01666;gene_id=Cattle_Y_G00961;transcript_id=Cattle_Y_T01666;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49306398	49306813	692	-	2	ID=Cattle_Y_E03210;Parent=Cattle_Y_T01666;gene_id=Cattle_Y_G00961;transcript_id=Cattle_Y_T01666;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49306910	49307033	218	-	0	ID=Cattle_Y_E03211;Parent=Cattle_Y_T01666;gene_id=Cattle_Y_G00961;transcript_id=Cattle_Y_T01666;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49304695	49304772	135	-	0	ID=Cattle_Y_C02803;Parent=Cattle_Y_T01666;gene_id=Cattle_Y_G00961;transcript_id=Cattle_Y_T01666;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49304889	49305034	270	-	2	ID=Cattle_Y_C02804;Parent=Cattle_Y_T01666;gene_id=Cattle_Y_G00961;transcript_id=Cattle_Y_T01666;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49305130	49305241	203	-	0	ID=Cattle_Y_C02805;Parent=Cattle_Y_T01666;gene_id=Cattle_Y_G00961;transcript_id=Cattle_Y_T01666;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49305425	49305502	133	-	0	ID=Cattle_Y_C02806;Parent=Cattle_Y_T01666;gene_id=Cattle_Y_G00961;transcript_id=Cattle_Y_T01666;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49306398	49306813	692	-	2	ID=Cattle_Y_C02807;Parent=Cattle_Y_T01666;gene_id=Cattle_Y_G00961;transcript_id=Cattle_Y_T01666;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49306910	49307033	218	-	0	ID=Cattle_Y_C02808;Parent=Cattle_Y_T01666;gene_id=Cattle_Y_G00961;transcript_id=Cattle_Y_T01666;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49312332	49314670	1651	-	.	ID=Cattle_Y_G00962;Dbxref=BGD:BT19054,GeneID:281554;Name=TSPY;description=testis specific protein%2C Y-linked 1;gbkey=Gene;gene=TSPY;gene_biotype=protein_coding;gene_synonym=TSPY-M1,TSPY1;gene_id=Cattle_Y_G00962;source_id=gene-TSPY
haplotype2-0000357	CAT	mRNA	49312332	49314670	1651	-	.	ID=Cattle_Y_T01667;Parent=Cattle_Y_G00962;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Name=NM_001244608.1;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein%2C Y-linked 1;transcript_id=Cattle_Y_T01667;gene_id=Cattle_Y_G00962;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001244608.1
haplotype2-0000357	CAT	exon	49312332	49312409	135	-	0	ID=Cattle_Y_E03212;Parent=Cattle_Y_T01667;gene_id=Cattle_Y_G00962;transcript_id=Cattle_Y_T01667;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49312526	49312671	270	-	2	ID=Cattle_Y_E03213;Parent=Cattle_Y_T01667;gene_id=Cattle_Y_G00962;transcript_id=Cattle_Y_T01667;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49312767	49312878	203	-	0	ID=Cattle_Y_E03214;Parent=Cattle_Y_T01667;gene_id=Cattle_Y_G00962;transcript_id=Cattle_Y_T01667;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49313062	49313139	133	-	0	ID=Cattle_Y_E03215;Parent=Cattle_Y_T01667;gene_id=Cattle_Y_G00962;transcript_id=Cattle_Y_T01667;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49314035	49314450	692	-	2	ID=Cattle_Y_E03216;Parent=Cattle_Y_T01667;gene_id=Cattle_Y_G00962;transcript_id=Cattle_Y_T01667;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49314547	49314670	218	-	0	ID=Cattle_Y_E03217;Parent=Cattle_Y_T01667;gene_id=Cattle_Y_G00962;transcript_id=Cattle_Y_T01667;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49312332	49312409	135	-	0	ID=Cattle_Y_C02809;Parent=Cattle_Y_T01667;gene_id=Cattle_Y_G00962;transcript_id=Cattle_Y_T01667;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49312526	49312671	270	-	2	ID=Cattle_Y_C02810;Parent=Cattle_Y_T01667;gene_id=Cattle_Y_G00962;transcript_id=Cattle_Y_T01667;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49312767	49312878	203	-	0	ID=Cattle_Y_C02811;Parent=Cattle_Y_T01667;gene_id=Cattle_Y_G00962;transcript_id=Cattle_Y_T01667;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49313062	49313139	133	-	0	ID=Cattle_Y_C02812;Parent=Cattle_Y_T01667;gene_id=Cattle_Y_G00962;transcript_id=Cattle_Y_T01667;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49314035	49314450	692	-	2	ID=Cattle_Y_C02813;Parent=Cattle_Y_T01667;gene_id=Cattle_Y_G00962;transcript_id=Cattle_Y_T01667;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49314547	49314670	218	-	0	ID=Cattle_Y_C02814;Parent=Cattle_Y_T01667;gene_id=Cattle_Y_G00962;transcript_id=Cattle_Y_T01667;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49319973	49322110	1435	-	.	ID=Cattle_Y_G00963;Dbxref=GeneID:132344573;Name=LOC132344573;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344573;gene_biotype=protein_coding;partial=true;start_range=.,9192022;gene_id=Cattle_Y_G00963;source_id=gene-LOC132344573
haplotype2-0000357	CAT	mRNA	49319973	49322110	1435	-	.	ID=Cattle_Y_T01668;Parent=Cattle_Y_G00963;Dbxref=GeneID:132344573,GenBank:XM_059884238.1;Name=XM_059884238.1;gbkey=mRNA;gene=LOC132344573;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9192022;transcript_id=Cattle_Y_T01668;gene_id=Cattle_Y_G00963;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884238.1
haplotype2-0000357	CAT	exon	49319973	49320050	135	-	0	ID=Cattle_Y_E03218;Parent=Cattle_Y_T01668;gene_id=Cattle_Y_G00963;transcript_id=Cattle_Y_T01668;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49320167	49320312	270	-	2	ID=Cattle_Y_E03219;Parent=Cattle_Y_T01668;gene_id=Cattle_Y_G00963;transcript_id=Cattle_Y_T01668;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49320408	49320519	203	-	0	ID=Cattle_Y_E03220;Parent=Cattle_Y_T01668;gene_id=Cattle_Y_G00963;transcript_id=Cattle_Y_T01668;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49320703	49320780	133	-	0	ID=Cattle_Y_E03221;Parent=Cattle_Y_T01668;gene_id=Cattle_Y_G00963;transcript_id=Cattle_Y_T01668;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49321676	49322110	694	-	0	ID=Cattle_Y_E03222;Parent=Cattle_Y_T01668;gene_id=Cattle_Y_G00963;transcript_id=Cattle_Y_T01668;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49319973	49320050	135	-	0	ID=Cattle_Y_C02815;Parent=Cattle_Y_T01668;gene_id=Cattle_Y_G00963;transcript_id=Cattle_Y_T01668;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49320167	49320312	270	-	2	ID=Cattle_Y_C02816;Parent=Cattle_Y_T01668;gene_id=Cattle_Y_G00963;transcript_id=Cattle_Y_T01668;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49320408	49320519	203	-	0	ID=Cattle_Y_C02817;Parent=Cattle_Y_T01668;gene_id=Cattle_Y_G00963;transcript_id=Cattle_Y_T01668;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49320703	49320780	133	-	0	ID=Cattle_Y_C02818;Parent=Cattle_Y_T01668;gene_id=Cattle_Y_G00963;transcript_id=Cattle_Y_T01668;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49321676	49322110	694	-	0	ID=Cattle_Y_C02819;Parent=Cattle_Y_T01668;gene_id=Cattle_Y_G00963;transcript_id=Cattle_Y_T01668;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49326645	49329857	.	-	.	ID=Cattle_Y_G00964;Dbxref=BGD:BT19054,GeneID:281554;Name=TSPY;description=testis specific protein%2C Y-linked 1;gbkey=Gene;gene=TSPY;gene_biotype=protein_coding;gene_synonym=TSPY-M1,TSPY1;gene_id=Cattle_Y_G00964;source_id=gene-TSPY
haplotype2-0000357	CAT	mRNA	49326645	49329857	.	-	.	ID=Cattle_Y_T01669;Parent=Cattle_Y_G00964;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Name=NM_001244608.1;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein%2C Y-linked 1;transcript_id=Cattle_Y_T01669;gene_id=Cattle_Y_G00964;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001244608.1
haplotype2-0000357	CAT	exon	49326645	49326860	.	-	.	ID=Cattle_Y_E03223;Parent=Cattle_Y_T01669;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01669;gene_id=Cattle_Y_G00964;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-7
haplotype2-0000357	CAT	exon	49327580	49327687	.	-	.	ID=Cattle_Y_E03224;Parent=Cattle_Y_T01669;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01669;gene_id=Cattle_Y_G00964;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-6
haplotype2-0000357	CAT	exon	49327804	49327949	.	-	.	ID=Cattle_Y_E03225;Parent=Cattle_Y_T01669;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01669;gene_id=Cattle_Y_G00964;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-5
haplotype2-0000357	CAT	exon	49328045	49328156	.	-	.	ID=Cattle_Y_E03226;Parent=Cattle_Y_T01669;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01669;gene_id=Cattle_Y_G00964;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-4
haplotype2-0000357	CAT	exon	49328340	49328417	.	-	.	ID=Cattle_Y_E03227;Parent=Cattle_Y_T01669;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01669;gene_id=Cattle_Y_G00964;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-3
haplotype2-0000357	CAT	exon	49329222	49329637	.	-	.	ID=Cattle_Y_E03228;Parent=Cattle_Y_T01669;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01669;gene_id=Cattle_Y_G00964;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-2
haplotype2-0000357	CAT	exon	49329734	49329857	.	-	.	ID=Cattle_Y_E03229;Parent=Cattle_Y_T01669;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein, Y-linked 1;transcript_id=Cattle_Y_T01669;gene_id=Cattle_Y_G00964;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244608.1-1
haplotype2-0000357	CAT	CDS	49327610	49327687	.	-	0	ID=Cattle_Y_C02820;Parent=Cattle_Y_T01669;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_11;gene_id=Cattle_Y_G00964;transcript_id=Cattle_Y_T01669;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49327804	49327949	.	-	2	ID=Cattle_Y_C02821;Parent=Cattle_Y_T01669;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_11;gene_id=Cattle_Y_G00964;transcript_id=Cattle_Y_T01669;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49328045	49328156	.	-	0	ID=Cattle_Y_C02822;Parent=Cattle_Y_T01669;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_11;gene_id=Cattle_Y_G00964;transcript_id=Cattle_Y_T01669;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49328340	49328417	.	-	0	ID=Cattle_Y_C02823;Parent=Cattle_Y_T01669;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_11;gene_id=Cattle_Y_G00964;transcript_id=Cattle_Y_T01669;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49329222	49329637	.	-	2	ID=Cattle_Y_C02824;Parent=Cattle_Y_T01669;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_11;gene_id=Cattle_Y_G00964;transcript_id=Cattle_Y_T01669;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49329734	49329857	.	-	0	ID=Cattle_Y_C02825;Parent=Cattle_Y_T01669;Dbxref=GeneID:281554,GenBank:NP_001231537.1,BGD:BT19054;Name=NP_001231537.1;Note=The RefSeq protein has 4 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=TSPY;inference=similar to AA sequence (same species):RefSeq:NP_001231537.1;product=testis-specific Y-encoded protein 1;protein_id=NP_001231537.1_11;gene_id=Cattle_Y_G00964;transcript_id=Cattle_Y_T01669;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49335154	49337285	.	-	.	ID=Cattle_Y_G00965;Dbxref=GeneID:132344575;Name=LOC132344575;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344575;gene_biotype=protein_coding;partial=true;start_range=.,9228925;gene_id=Cattle_Y_G00965;source_id=gene-LOC132344575
haplotype2-0000357	CAT	mRNA	49335154	49337285	.	-	.	ID=Cattle_Y_T01670;Parent=Cattle_Y_G00965;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;Name=XM_059884240.1;gbkey=mRNA;gene=LOC132344575;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01670;gene_id=Cattle_Y_G00965;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884240.1
haplotype2-0000357	CAT	exon	49335154	49335231	.	-	.	ID=Cattle_Y_E03230;Parent=Cattle_Y_T01670;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01670;gene_id=Cattle_Y_G00965;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-6
haplotype2-0000357	CAT	exon	49335348	49335493	.	-	.	ID=Cattle_Y_E03231;Parent=Cattle_Y_T01670;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01670;gene_id=Cattle_Y_G00965;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-5
haplotype2-0000357	CAT	exon	49335589	49335700	.	-	.	ID=Cattle_Y_E03232;Parent=Cattle_Y_T01670;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01670;gene_id=Cattle_Y_G00965;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-4
haplotype2-0000357	CAT	exon	49335884	49335961	.	-	.	ID=Cattle_Y_E03233;Parent=Cattle_Y_T01670;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01670;gene_id=Cattle_Y_G00965;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-3
haplotype2-0000357	CAT	exon	49336758	49337173	.	-	.	ID=Cattle_Y_E03234;Parent=Cattle_Y_T01670;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01670;gene_id=Cattle_Y_G00965;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-2
haplotype2-0000357	CAT	exon	49337270	49337285	.	-	.	ID=Cattle_Y_E03235;Parent=Cattle_Y_T01670;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01670;gene_id=Cattle_Y_G00965;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-1
haplotype2-0000357	CAT	CDS	49335154	49335231	.	-	0	ID=Cattle_Y_C02826;Parent=Cattle_Y_T01670;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_7;gene_id=Cattle_Y_G00965;transcript_id=Cattle_Y_T01670;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49335348	49335493	.	-	2	ID=Cattle_Y_C02827;Parent=Cattle_Y_T01670;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_7;gene_id=Cattle_Y_G00965;transcript_id=Cattle_Y_T01670;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49335589	49335700	.	-	0	ID=Cattle_Y_C02828;Parent=Cattle_Y_T01670;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_7;gene_id=Cattle_Y_G00965;transcript_id=Cattle_Y_T01670;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49335884	49335961	.	-	0	ID=Cattle_Y_C02829;Parent=Cattle_Y_T01670;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_7;gene_id=Cattle_Y_G00965;transcript_id=Cattle_Y_T01670;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49336758	49337173	.	-	2	ID=Cattle_Y_C02830;Parent=Cattle_Y_T01670;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_7;gene_id=Cattle_Y_G00965;transcript_id=Cattle_Y_T01670;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49337270	49337285	.	-	0	ID=Cattle_Y_C02831;Parent=Cattle_Y_T01670;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_7;start_range=.,9228925;gene_id=Cattle_Y_G00965;transcript_id=Cattle_Y_T01670;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49342690	49344821	.	-	.	ID=Cattle_Y_G00966;Dbxref=GeneID:132344575;Name=LOC132344575;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344575;gene_biotype=protein_coding;partial=true;start_range=.,9228925;gene_id=Cattle_Y_G00966;source_id=gene-LOC132344575
haplotype2-0000357	CAT	mRNA	49342690	49344821	.	-	.	ID=Cattle_Y_T01671;Parent=Cattle_Y_G00966;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;Name=XM_059884240.1;gbkey=mRNA;gene=LOC132344575;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01671;gene_id=Cattle_Y_G00966;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884240.1
haplotype2-0000357	CAT	exon	49342690	49342767	.	-	.	ID=Cattle_Y_E03236;Parent=Cattle_Y_T01671;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01671;gene_id=Cattle_Y_G00966;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-6
haplotype2-0000357	CAT	exon	49342884	49343029	.	-	.	ID=Cattle_Y_E03237;Parent=Cattle_Y_T01671;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01671;gene_id=Cattle_Y_G00966;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-5
haplotype2-0000357	CAT	exon	49343125	49343236	.	-	.	ID=Cattle_Y_E03238;Parent=Cattle_Y_T01671;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01671;gene_id=Cattle_Y_G00966;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-4
haplotype2-0000357	CAT	exon	49343420	49343497	.	-	.	ID=Cattle_Y_E03239;Parent=Cattle_Y_T01671;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01671;gene_id=Cattle_Y_G00966;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-3
haplotype2-0000357	CAT	exon	49344294	49344709	.	-	.	ID=Cattle_Y_E03240;Parent=Cattle_Y_T01671;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01671;gene_id=Cattle_Y_G00966;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-2
haplotype2-0000357	CAT	exon	49344806	49344821	.	-	.	ID=Cattle_Y_E03241;Parent=Cattle_Y_T01671;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01671;gene_id=Cattle_Y_G00966;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-1
haplotype2-0000357	CAT	CDS	49342690	49342767	.	-	0	ID=Cattle_Y_C02832;Parent=Cattle_Y_T01671;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_4;gene_id=Cattle_Y_G00966;transcript_id=Cattle_Y_T01671;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49342884	49343029	.	-	2	ID=Cattle_Y_C02833;Parent=Cattle_Y_T01671;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_4;gene_id=Cattle_Y_G00966;transcript_id=Cattle_Y_T01671;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49343125	49343236	.	-	0	ID=Cattle_Y_C02834;Parent=Cattle_Y_T01671;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_4;gene_id=Cattle_Y_G00966;transcript_id=Cattle_Y_T01671;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49343420	49343497	.	-	0	ID=Cattle_Y_C02835;Parent=Cattle_Y_T01671;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_4;gene_id=Cattle_Y_G00966;transcript_id=Cattle_Y_T01671;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49344294	49344709	.	-	2	ID=Cattle_Y_C02836;Parent=Cattle_Y_T01671;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_4;gene_id=Cattle_Y_G00966;transcript_id=Cattle_Y_T01671;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49344806	49344821	.	-	0	ID=Cattle_Y_C02837;Parent=Cattle_Y_T01671;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_4;start_range=.,9228925;gene_id=Cattle_Y_G00966;transcript_id=Cattle_Y_T01671;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49357750	49359980	.	-	.	ID=Cattle_Y_G00967;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00967;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	49357750	49359980	.	-	.	ID=Cattle_Y_T01672;Parent=Cattle_Y_G00967;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01672;gene_id=Cattle_Y_G00967;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	49357750	49357827	.	-	.	ID=Cattle_Y_E03242;Parent=Cattle_Y_T01672;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01672;gene_id=Cattle_Y_G00967;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	49357944	49358089	.	-	.	ID=Cattle_Y_E03243;Parent=Cattle_Y_T01672;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01672;gene_id=Cattle_Y_G00967;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	49358185	49358296	.	-	.	ID=Cattle_Y_E03244;Parent=Cattle_Y_T01672;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01672;gene_id=Cattle_Y_G00967;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	49358480	49358557	.	-	.	ID=Cattle_Y_E03245;Parent=Cattle_Y_T01672;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01672;gene_id=Cattle_Y_G00967;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	49359345	49359760	.	-	.	ID=Cattle_Y_E03246;Parent=Cattle_Y_T01672;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01672;gene_id=Cattle_Y_G00967;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	49359857	49359980	.	-	.	ID=Cattle_Y_E03247;Parent=Cattle_Y_T01672;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01672;gene_id=Cattle_Y_G00967;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	49357750	49357827	.	-	0	ID=Cattle_Y_C02838;Parent=Cattle_Y_T01672;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_21;gene_id=Cattle_Y_G00967;transcript_id=Cattle_Y_T01672;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49357944	49358089	.	-	2	ID=Cattle_Y_C02839;Parent=Cattle_Y_T01672;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_21;gene_id=Cattle_Y_G00967;transcript_id=Cattle_Y_T01672;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49358185	49358296	.	-	0	ID=Cattle_Y_C02840;Parent=Cattle_Y_T01672;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_21;gene_id=Cattle_Y_G00967;transcript_id=Cattle_Y_T01672;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49358480	49358557	.	-	0	ID=Cattle_Y_C02841;Parent=Cattle_Y_T01672;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_21;gene_id=Cattle_Y_G00967;transcript_id=Cattle_Y_T01672;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49359345	49359760	.	-	2	ID=Cattle_Y_C02842;Parent=Cattle_Y_T01672;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_21;gene_id=Cattle_Y_G00967;transcript_id=Cattle_Y_T01672;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49359857	49359980	.	-	0	ID=Cattle_Y_C02843;Parent=Cattle_Y_T01672;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_21;gene_id=Cattle_Y_G00967;transcript_id=Cattle_Y_T01672;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49365273	49367405	.	-	.	ID=Cattle_Y_G00968;Dbxref=GeneID:132344607;Name=LOC132344607;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344607;gene_biotype=protein_coding;partial=true;start_range=.,9740364;gene_id=Cattle_Y_G00968;source_id=gene-LOC132344607
haplotype2-0000357	CAT	mRNA	49365273	49367405	.	-	.	ID=Cattle_Y_T01673;Parent=Cattle_Y_G00968;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;Name=XM_059884273.1;gbkey=mRNA;gene=LOC132344607;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9740364;transcript_id=Cattle_Y_T01673;gene_id=Cattle_Y_G00968;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884273.1
haplotype2-0000357	CAT	exon	49365273	49365350	.	-	.	ID=Cattle_Y_E03248;Parent=Cattle_Y_T01673;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01673;gene_id=Cattle_Y_G00968;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-6
haplotype2-0000357	CAT	exon	49365467	49365612	.	-	.	ID=Cattle_Y_E03249;Parent=Cattle_Y_T01673;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01673;gene_id=Cattle_Y_G00968;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-5
haplotype2-0000357	CAT	exon	49365708	49365819	.	-	.	ID=Cattle_Y_E03250;Parent=Cattle_Y_T01673;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01673;gene_id=Cattle_Y_G00968;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-4
haplotype2-0000357	CAT	exon	49366003	49366080	.	-	.	ID=Cattle_Y_E03251;Parent=Cattle_Y_T01673;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01673;gene_id=Cattle_Y_G00968;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-3
haplotype2-0000357	CAT	exon	49366878	49367293	.	-	.	ID=Cattle_Y_E03252;Parent=Cattle_Y_T01673;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01673;gene_id=Cattle_Y_G00968;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-2
haplotype2-0000357	CAT	exon	49367390	49367405	.	-	.	ID=Cattle_Y_E03253;Parent=Cattle_Y_T01673;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9740364;transcript_id=Cattle_Y_T01673;gene_id=Cattle_Y_G00968;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-1
haplotype2-0000357	CAT	CDS	49365273	49365350	.	-	0	ID=Cattle_Y_C02844;Parent=Cattle_Y_T01673;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1;gene_id=Cattle_Y_G00968;transcript_id=Cattle_Y_T01673;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49365467	49365612	.	-	2	ID=Cattle_Y_C02845;Parent=Cattle_Y_T01673;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1;gene_id=Cattle_Y_G00968;transcript_id=Cattle_Y_T01673;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49365708	49365819	.	-	0	ID=Cattle_Y_C02846;Parent=Cattle_Y_T01673;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1;gene_id=Cattle_Y_G00968;transcript_id=Cattle_Y_T01673;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49366003	49366080	.	-	0	ID=Cattle_Y_C02847;Parent=Cattle_Y_T01673;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1;gene_id=Cattle_Y_G00968;transcript_id=Cattle_Y_T01673;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49366878	49367293	.	-	2	ID=Cattle_Y_C02848;Parent=Cattle_Y_T01673;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1;gene_id=Cattle_Y_G00968;transcript_id=Cattle_Y_T01673;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49367390	49367405	.	-	0	ID=Cattle_Y_C02849;Parent=Cattle_Y_T01673;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1;start_range=.,9740364;gene_id=Cattle_Y_G00968;transcript_id=Cattle_Y_T01673;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49372808	49374940	.	-	.	ID=Cattle_Y_G00969;Dbxref=GeneID:132344608;Name=LOC132344608;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344608;gene_biotype=protein_coding;partial=true;start_range=.,9747904;gene_id=Cattle_Y_G00969;source_id=gene-LOC132344608
haplotype2-0000357	CAT	mRNA	49372808	49374940	.	-	.	ID=Cattle_Y_T01674;Parent=Cattle_Y_G00969;Dbxref=GeneID:132344608,GenBank:XM_059884274.1;Name=XM_059884274.1;gbkey=mRNA;gene=LOC132344608;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9747904;transcript_id=Cattle_Y_T01674;gene_id=Cattle_Y_G00969;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884274.1
haplotype2-0000357	CAT	exon	49372808	49372885	.	-	.	ID=Cattle_Y_E03254;Parent=Cattle_Y_T01674;Dbxref=GeneID:132344608,GenBank:XM_059884274.1;gbkey=mRNA;gene=LOC132344608;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01674;gene_id=Cattle_Y_G00969;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884274.1-6
haplotype2-0000357	CAT	exon	49373002	49373147	.	-	.	ID=Cattle_Y_E03255;Parent=Cattle_Y_T01674;Dbxref=GeneID:132344608,GenBank:XM_059884274.1;gbkey=mRNA;gene=LOC132344608;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01674;gene_id=Cattle_Y_G00969;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884274.1-5
haplotype2-0000357	CAT	exon	49373243	49373354	.	-	.	ID=Cattle_Y_E03256;Parent=Cattle_Y_T01674;Dbxref=GeneID:132344608,GenBank:XM_059884274.1;gbkey=mRNA;gene=LOC132344608;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01674;gene_id=Cattle_Y_G00969;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884274.1-4
haplotype2-0000357	CAT	exon	49373538	49373615	.	-	.	ID=Cattle_Y_E03257;Parent=Cattle_Y_T01674;Dbxref=GeneID:132344608,GenBank:XM_059884274.1;gbkey=mRNA;gene=LOC132344608;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01674;gene_id=Cattle_Y_G00969;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884274.1-3
haplotype2-0000357	CAT	exon	49374413	49374828	.	-	.	ID=Cattle_Y_E03258;Parent=Cattle_Y_T01674;Dbxref=GeneID:132344608,GenBank:XM_059884274.1;gbkey=mRNA;gene=LOC132344608;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01674;gene_id=Cattle_Y_G00969;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884274.1-2
haplotype2-0000357	CAT	exon	49374925	49374940	.	-	.	ID=Cattle_Y_E03259;Parent=Cattle_Y_T01674;Dbxref=GeneID:132344608,GenBank:XM_059884274.1;gbkey=mRNA;gene=LOC132344608;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9747904;transcript_id=Cattle_Y_T01674;gene_id=Cattle_Y_G00969;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884274.1-1
haplotype2-0000357	CAT	CDS	49372808	49372885	.	-	0	ID=Cattle_Y_C02850;Parent=Cattle_Y_T01674;Dbxref=GeneID:132344608,GenBank:XP_059740257.1;Name=XP_059740257.1;gbkey=CDS;gene=LOC132344608;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740257.1;gene_id=Cattle_Y_G00969;transcript_id=Cattle_Y_T01674;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49373002	49373147	.	-	2	ID=Cattle_Y_C02851;Parent=Cattle_Y_T01674;Dbxref=GeneID:132344608,GenBank:XP_059740257.1;Name=XP_059740257.1;gbkey=CDS;gene=LOC132344608;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740257.1;gene_id=Cattle_Y_G00969;transcript_id=Cattle_Y_T01674;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49373243	49373354	.	-	0	ID=Cattle_Y_C02852;Parent=Cattle_Y_T01674;Dbxref=GeneID:132344608,GenBank:XP_059740257.1;Name=XP_059740257.1;gbkey=CDS;gene=LOC132344608;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740257.1;gene_id=Cattle_Y_G00969;transcript_id=Cattle_Y_T01674;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49373538	49373615	.	-	0	ID=Cattle_Y_C02853;Parent=Cattle_Y_T01674;Dbxref=GeneID:132344608,GenBank:XP_059740257.1;Name=XP_059740257.1;gbkey=CDS;gene=LOC132344608;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740257.1;gene_id=Cattle_Y_G00969;transcript_id=Cattle_Y_T01674;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49374413	49374828	.	-	2	ID=Cattle_Y_C02854;Parent=Cattle_Y_T01674;Dbxref=GeneID:132344608,GenBank:XP_059740257.1;Name=XP_059740257.1;gbkey=CDS;gene=LOC132344608;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740257.1;gene_id=Cattle_Y_G00969;transcript_id=Cattle_Y_T01674;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49374925	49374940	.	-	0	ID=Cattle_Y_C02855;Parent=Cattle_Y_T01674;Dbxref=GeneID:132344608,GenBank:XP_059740257.1;Name=XP_059740257.1;gbkey=CDS;gene=LOC132344608;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740257.1;start_range=.,9747904;gene_id=Cattle_Y_G00969;transcript_id=Cattle_Y_T01674;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49380343	49382475	.	-	.	ID=Cattle_Y_G00970;Dbxref=GeneID:132344579;Name=LOC132344579;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344579;gene_biotype=protein_coding;partial=true;start_range=.,9265914;gene_id=Cattle_Y_G00970;source_id=gene-LOC132344579
haplotype2-0000357	CAT	mRNA	49380343	49382475	.	-	.	ID=Cattle_Y_T01675;Parent=Cattle_Y_G00970;Dbxref=GeneID:132344579,GenBank:XM_059884244.1;Name=XM_059884244.1;gbkey=mRNA;gene=LOC132344579;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9265914;transcript_id=Cattle_Y_T01675;gene_id=Cattle_Y_G00970;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884244.1
haplotype2-0000357	CAT	exon	49380343	49380420	.	-	.	ID=Cattle_Y_E03260;Parent=Cattle_Y_T01675;Dbxref=GeneID:132344579,GenBank:XM_059884244.1;gbkey=mRNA;gene=LOC132344579;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01675;gene_id=Cattle_Y_G00970;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884244.1-6
haplotype2-0000357	CAT	exon	49380537	49380682	.	-	.	ID=Cattle_Y_E03261;Parent=Cattle_Y_T01675;Dbxref=GeneID:132344579,GenBank:XM_059884244.1;gbkey=mRNA;gene=LOC132344579;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01675;gene_id=Cattle_Y_G00970;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884244.1-5
haplotype2-0000357	CAT	exon	49380778	49380889	.	-	.	ID=Cattle_Y_E03262;Parent=Cattle_Y_T01675;Dbxref=GeneID:132344579,GenBank:XM_059884244.1;gbkey=mRNA;gene=LOC132344579;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01675;gene_id=Cattle_Y_G00970;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884244.1-4
haplotype2-0000357	CAT	exon	49381073	49381150	.	-	.	ID=Cattle_Y_E03263;Parent=Cattle_Y_T01675;Dbxref=GeneID:132344579,GenBank:XM_059884244.1;gbkey=mRNA;gene=LOC132344579;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01675;gene_id=Cattle_Y_G00970;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884244.1-3
haplotype2-0000357	CAT	exon	49381948	49382363	.	-	.	ID=Cattle_Y_E03264;Parent=Cattle_Y_T01675;Dbxref=GeneID:132344579,GenBank:XM_059884244.1;gbkey=mRNA;gene=LOC132344579;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01675;gene_id=Cattle_Y_G00970;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884244.1-2
haplotype2-0000357	CAT	exon	49382460	49382475	.	-	.	ID=Cattle_Y_E03265;Parent=Cattle_Y_T01675;Dbxref=GeneID:132344579,GenBank:XM_059884244.1;gbkey=mRNA;gene=LOC132344579;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9265914;transcript_id=Cattle_Y_T01675;gene_id=Cattle_Y_G00970;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884244.1-1
haplotype2-0000357	CAT	CDS	49380343	49380420	.	-	0	ID=Cattle_Y_C02856;Parent=Cattle_Y_T01675;Dbxref=GeneID:132344579,GenBank:XP_059740227.1;Name=XP_059740227.1;gbkey=CDS;gene=LOC132344579;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740227.1_1;gene_id=Cattle_Y_G00970;transcript_id=Cattle_Y_T01675;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49380537	49380682	.	-	2	ID=Cattle_Y_C02857;Parent=Cattle_Y_T01675;Dbxref=GeneID:132344579,GenBank:XP_059740227.1;Name=XP_059740227.1;gbkey=CDS;gene=LOC132344579;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740227.1_1;gene_id=Cattle_Y_G00970;transcript_id=Cattle_Y_T01675;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49380778	49380889	.	-	0	ID=Cattle_Y_C02858;Parent=Cattle_Y_T01675;Dbxref=GeneID:132344579,GenBank:XP_059740227.1;Name=XP_059740227.1;gbkey=CDS;gene=LOC132344579;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740227.1_1;gene_id=Cattle_Y_G00970;transcript_id=Cattle_Y_T01675;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49381073	49381150	.	-	0	ID=Cattle_Y_C02859;Parent=Cattle_Y_T01675;Dbxref=GeneID:132344579,GenBank:XP_059740227.1;Name=XP_059740227.1;gbkey=CDS;gene=LOC132344579;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740227.1_1;gene_id=Cattle_Y_G00970;transcript_id=Cattle_Y_T01675;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49381948	49382363	.	-	2	ID=Cattle_Y_C02860;Parent=Cattle_Y_T01675;Dbxref=GeneID:132344579,GenBank:XP_059740227.1;Name=XP_059740227.1;gbkey=CDS;gene=LOC132344579;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740227.1_1;gene_id=Cattle_Y_G00970;transcript_id=Cattle_Y_T01675;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49382460	49382475	.	-	0	ID=Cattle_Y_C02861;Parent=Cattle_Y_T01675;Dbxref=GeneID:132344579,GenBank:XP_059740227.1;Name=XP_059740227.1;gbkey=CDS;gene=LOC132344579;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740227.1_1;start_range=.,9265914;gene_id=Cattle_Y_G00970;transcript_id=Cattle_Y_T01675;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49387878	49390010	.	-	.	ID=Cattle_Y_G00971;Dbxref=GeneID:132344591;Name=LOC132344591;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344591;gene_biotype=protein_coding;partial=true;start_range=.,9493910;gene_id=Cattle_Y_G00971;source_id=gene-LOC132344591
haplotype2-0000357	CAT	mRNA	49387878	49390010	.	-	.	ID=Cattle_Y_T01676;Parent=Cattle_Y_G00971;Dbxref=GeneID:132344591,GenBank:XM_059884257.1;Name=XM_059884257.1;gbkey=mRNA;gene=LOC132344591;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9493910;transcript_id=Cattle_Y_T01676;gene_id=Cattle_Y_G00971;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884257.1
haplotype2-0000357	CAT	exon	49387878	49387955	.	-	.	ID=Cattle_Y_E03266;Parent=Cattle_Y_T01676;Dbxref=GeneID:132344591,GenBank:XM_059884257.1;gbkey=mRNA;gene=LOC132344591;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01676;gene_id=Cattle_Y_G00971;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884257.1-6
haplotype2-0000357	CAT	exon	49388072	49388217	.	-	.	ID=Cattle_Y_E03267;Parent=Cattle_Y_T01676;Dbxref=GeneID:132344591,GenBank:XM_059884257.1;gbkey=mRNA;gene=LOC132344591;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01676;gene_id=Cattle_Y_G00971;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884257.1-5
haplotype2-0000357	CAT	exon	49388313	49388424	.	-	.	ID=Cattle_Y_E03268;Parent=Cattle_Y_T01676;Dbxref=GeneID:132344591,GenBank:XM_059884257.1;gbkey=mRNA;gene=LOC132344591;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01676;gene_id=Cattle_Y_G00971;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884257.1-4
haplotype2-0000357	CAT	exon	49388608	49388685	.	-	.	ID=Cattle_Y_E03269;Parent=Cattle_Y_T01676;Dbxref=GeneID:132344591,GenBank:XM_059884257.1;gbkey=mRNA;gene=LOC132344591;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01676;gene_id=Cattle_Y_G00971;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884257.1-3
haplotype2-0000357	CAT	exon	49389483	49389898	.	-	.	ID=Cattle_Y_E03270;Parent=Cattle_Y_T01676;Dbxref=GeneID:132344591,GenBank:XM_059884257.1;gbkey=mRNA;gene=LOC132344591;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01676;gene_id=Cattle_Y_G00971;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884257.1-2
haplotype2-0000357	CAT	exon	49389995	49390010	.	-	.	ID=Cattle_Y_E03271;Parent=Cattle_Y_T01676;Dbxref=GeneID:132344591,GenBank:XM_059884257.1;gbkey=mRNA;gene=LOC132344591;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9493910;transcript_id=Cattle_Y_T01676;gene_id=Cattle_Y_G00971;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884257.1-1
haplotype2-0000357	CAT	CDS	49387878	49387955	.	-	0	ID=Cattle_Y_C02862;Parent=Cattle_Y_T01676;Dbxref=GeneID:132344591,GenBank:XP_059740240.1;Name=XP_059740240.1;gbkey=CDS;gene=LOC132344591;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740240.1;gene_id=Cattle_Y_G00971;transcript_id=Cattle_Y_T01676;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49388072	49388217	.	-	2	ID=Cattle_Y_C02863;Parent=Cattle_Y_T01676;Dbxref=GeneID:132344591,GenBank:XP_059740240.1;Name=XP_059740240.1;gbkey=CDS;gene=LOC132344591;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740240.1;gene_id=Cattle_Y_G00971;transcript_id=Cattle_Y_T01676;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49388313	49388424	.	-	0	ID=Cattle_Y_C02864;Parent=Cattle_Y_T01676;Dbxref=GeneID:132344591,GenBank:XP_059740240.1;Name=XP_059740240.1;gbkey=CDS;gene=LOC132344591;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740240.1;gene_id=Cattle_Y_G00971;transcript_id=Cattle_Y_T01676;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49388608	49388685	.	-	0	ID=Cattle_Y_C02865;Parent=Cattle_Y_T01676;Dbxref=GeneID:132344591,GenBank:XP_059740240.1;Name=XP_059740240.1;gbkey=CDS;gene=LOC132344591;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740240.1;gene_id=Cattle_Y_G00971;transcript_id=Cattle_Y_T01676;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49389483	49389898	.	-	2	ID=Cattle_Y_C02866;Parent=Cattle_Y_T01676;Dbxref=GeneID:132344591,GenBank:XP_059740240.1;Name=XP_059740240.1;gbkey=CDS;gene=LOC132344591;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740240.1;gene_id=Cattle_Y_G00971;transcript_id=Cattle_Y_T01676;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49389995	49390010	.	-	0	ID=Cattle_Y_C02867;Parent=Cattle_Y_T01676;Dbxref=GeneID:132344591,GenBank:XP_059740240.1;Name=XP_059740240.1;gbkey=CDS;gene=LOC132344591;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740240.1;start_range=.,9493910;gene_id=Cattle_Y_G00971;transcript_id=Cattle_Y_T01676;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49395414	49397654	.	-	.	ID=Cattle_Y_G00972;Dbxref=GeneID:132344609;Name=LOC132344609;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344609;gene_biotype=protein_coding;gene_id=Cattle_Y_G00972;source_id=gene-LOC132344609
haplotype2-0000357	CAT	mRNA	49395414	49397654	.	-	.	ID=Cattle_Y_T01677;Parent=Cattle_Y_G00972;Dbxref=GeneID:132344609,GenBank:XM_059884275.1;Name=XM_059884275.1;gbkey=mRNA;gene=LOC132344609;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01677;gene_id=Cattle_Y_G00972;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884275.1
haplotype2-0000357	CAT	exon	49395414	49395491	.	-	.	ID=Cattle_Y_E03272;Parent=Cattle_Y_T01677;Dbxref=GeneID:132344609,GenBank:XM_059884275.1;gbkey=mRNA;gene=LOC132344609;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01677;gene_id=Cattle_Y_G00972;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884275.1-6
haplotype2-0000357	CAT	exon	49395608	49395753	.	-	.	ID=Cattle_Y_E03273;Parent=Cattle_Y_T01677;Dbxref=GeneID:132344609,GenBank:XM_059884275.1;gbkey=mRNA;gene=LOC132344609;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01677;gene_id=Cattle_Y_G00972;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884275.1-5
haplotype2-0000357	CAT	exon	49395849	49395960	.	-	.	ID=Cattle_Y_E03274;Parent=Cattle_Y_T01677;Dbxref=GeneID:132344609,GenBank:XM_059884275.1;gbkey=mRNA;gene=LOC132344609;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01677;gene_id=Cattle_Y_G00972;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884275.1-4
haplotype2-0000357	CAT	exon	49396144	49396221	.	-	.	ID=Cattle_Y_E03275;Parent=Cattle_Y_T01677;Dbxref=GeneID:132344609,GenBank:XM_059884275.1;gbkey=mRNA;gene=LOC132344609;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01677;gene_id=Cattle_Y_G00972;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884275.1-3
haplotype2-0000357	CAT	exon	49397019	49397434	.	-	.	ID=Cattle_Y_E03276;Parent=Cattle_Y_T01677;Dbxref=GeneID:132344609,GenBank:XM_059884275.1;gbkey=mRNA;gene=LOC132344609;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01677;gene_id=Cattle_Y_G00972;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884275.1-2
haplotype2-0000357	CAT	exon	49397531	49397654	.	-	.	ID=Cattle_Y_E03277;Parent=Cattle_Y_T01677;Dbxref=GeneID:132344609,GenBank:XM_059884275.1;gbkey=mRNA;gene=LOC132344609;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01677;gene_id=Cattle_Y_G00972;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884275.1-1
haplotype2-0000357	CAT	CDS	49395414	49395491	.	-	0	ID=Cattle_Y_C02868;Parent=Cattle_Y_T01677;Dbxref=GeneID:132344609,GenBank:XP_059740258.1;Name=XP_059740258.1;gbkey=CDS;gene=LOC132344609;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740258.1;gene_id=Cattle_Y_G00972;transcript_id=Cattle_Y_T01677;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49395608	49395753	.	-	2	ID=Cattle_Y_C02869;Parent=Cattle_Y_T01677;Dbxref=GeneID:132344609,GenBank:XP_059740258.1;Name=XP_059740258.1;gbkey=CDS;gene=LOC132344609;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740258.1;gene_id=Cattle_Y_G00972;transcript_id=Cattle_Y_T01677;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49395849	49395960	.	-	0	ID=Cattle_Y_C02870;Parent=Cattle_Y_T01677;Dbxref=GeneID:132344609,GenBank:XP_059740258.1;Name=XP_059740258.1;gbkey=CDS;gene=LOC132344609;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740258.1;gene_id=Cattle_Y_G00972;transcript_id=Cattle_Y_T01677;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49396144	49396221	.	-	0	ID=Cattle_Y_C02871;Parent=Cattle_Y_T01677;Dbxref=GeneID:132344609,GenBank:XP_059740258.1;Name=XP_059740258.1;gbkey=CDS;gene=LOC132344609;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740258.1;gene_id=Cattle_Y_G00972;transcript_id=Cattle_Y_T01677;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49397019	49397434	.	-	2	ID=Cattle_Y_C02872;Parent=Cattle_Y_T01677;Dbxref=GeneID:132344609,GenBank:XP_059740258.1;Name=XP_059740258.1;gbkey=CDS;gene=LOC132344609;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740258.1;gene_id=Cattle_Y_G00972;transcript_id=Cattle_Y_T01677;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49397531	49397654	.	-	0	ID=Cattle_Y_C02873;Parent=Cattle_Y_T01677;Dbxref=GeneID:132344609,GenBank:XP_059740258.1;Name=XP_059740258.1;gbkey=CDS;gene=LOC132344609;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740258.1;gene_id=Cattle_Y_G00972;transcript_id=Cattle_Y_T01677;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49402950	49405190	.	-	.	ID=Cattle_Y_G00973;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00973;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	49402950	49405190	.	-	.	ID=Cattle_Y_T01678;Parent=Cattle_Y_G00973;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01678;gene_id=Cattle_Y_G00973;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	49402950	49403027	.	-	.	ID=Cattle_Y_E03278;Parent=Cattle_Y_T01678;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01678;gene_id=Cattle_Y_G00973;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	49403144	49403289	.	-	.	ID=Cattle_Y_E03279;Parent=Cattle_Y_T01678;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01678;gene_id=Cattle_Y_G00973;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	49403385	49403496	.	-	.	ID=Cattle_Y_E03280;Parent=Cattle_Y_T01678;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01678;gene_id=Cattle_Y_G00973;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	49403680	49403757	.	-	.	ID=Cattle_Y_E03281;Parent=Cattle_Y_T01678;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01678;gene_id=Cattle_Y_G00973;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	49404555	49404970	.	-	.	ID=Cattle_Y_E03282;Parent=Cattle_Y_T01678;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01678;gene_id=Cattle_Y_G00973;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	49405067	49405190	.	-	.	ID=Cattle_Y_E03283;Parent=Cattle_Y_T01678;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01678;gene_id=Cattle_Y_G00973;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	49402950	49403027	.	-	0	ID=Cattle_Y_C02874;Parent=Cattle_Y_T01678;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_25;gene_id=Cattle_Y_G00973;transcript_id=Cattle_Y_T01678;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49403144	49403289	.	-	2	ID=Cattle_Y_C02875;Parent=Cattle_Y_T01678;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_25;gene_id=Cattle_Y_G00973;transcript_id=Cattle_Y_T01678;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49403385	49403496	.	-	0	ID=Cattle_Y_C02876;Parent=Cattle_Y_T01678;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_25;gene_id=Cattle_Y_G00973;transcript_id=Cattle_Y_T01678;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49403680	49403757	.	-	0	ID=Cattle_Y_C02877;Parent=Cattle_Y_T01678;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_25;gene_id=Cattle_Y_G00973;transcript_id=Cattle_Y_T01678;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49404555	49404970	.	-	2	ID=Cattle_Y_C02878;Parent=Cattle_Y_T01678;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_25;gene_id=Cattle_Y_G00973;transcript_id=Cattle_Y_T01678;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49405067	49405190	.	-	0	ID=Cattle_Y_C02879;Parent=Cattle_Y_T01678;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_25;gene_id=Cattle_Y_G00973;transcript_id=Cattle_Y_T01678;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49410486	49412716	.	-	.	ID=Cattle_Y_G00974;Dbxref=GeneID:132344572;Name=LOC132344572;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344572;gene_biotype=protein_coding;gene_id=Cattle_Y_G00974;source_id=gene-LOC132344572
haplotype2-0000357	CAT	mRNA	49410486	49412716	.	-	.	ID=Cattle_Y_T01679;Parent=Cattle_Y_G00974;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;Name=XM_059884237.1;gbkey=mRNA;gene=LOC132344572;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 7%25 coverage of the annotated genomic feature by RNAseq alignments;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01679;gene_id=Cattle_Y_G00974;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884237.1
haplotype2-0000357	CAT	exon	49410486	49410563	.	-	.	ID=Cattle_Y_E03284;Parent=Cattle_Y_T01679;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01679;gene_id=Cattle_Y_G00974;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-6
haplotype2-0000357	CAT	exon	49410680	49410825	.	-	.	ID=Cattle_Y_E03285;Parent=Cattle_Y_T01679;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01679;gene_id=Cattle_Y_G00974;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-6
haplotype2-0000357	CAT	exon	49410921	49411032	.	-	.	ID=Cattle_Y_E03286;Parent=Cattle_Y_T01679;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01679;gene_id=Cattle_Y_G00974;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-6
haplotype2-0000357	CAT	exon	49411216	49411293	.	-	.	ID=Cattle_Y_E03287;Parent=Cattle_Y_T01679;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01679;gene_id=Cattle_Y_G00974;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-6
haplotype2-0000357	CAT	exon	49412081	49412496	.	-	.	ID=Cattle_Y_E03288;Parent=Cattle_Y_T01679;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01679;gene_id=Cattle_Y_G00974;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-6
haplotype2-0000357	CAT	exon	49412593	49412716	.	-	.	ID=Cattle_Y_E03289;Parent=Cattle_Y_T01679;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01679;gene_id=Cattle_Y_G00974;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-1
haplotype2-0000357	CAT	CDS	49410486	49410563	.	-	0	ID=Cattle_Y_C02880;Parent=Cattle_Y_T01679;gene_id=Cattle_Y_G00974;transcript_id=Cattle_Y_T01679;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49410680	49410825	.	-	2	ID=Cattle_Y_C02881;Parent=Cattle_Y_T01679;gene_id=Cattle_Y_G00974;transcript_id=Cattle_Y_T01679;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49410921	49411032	.	-	0	ID=Cattle_Y_C02882;Parent=Cattle_Y_T01679;gene_id=Cattle_Y_G00974;transcript_id=Cattle_Y_T01679;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49411216	49411293	.	-	0	ID=Cattle_Y_C02883;Parent=Cattle_Y_T01679;gene_id=Cattle_Y_G00974;transcript_id=Cattle_Y_T01679;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49412081	49412496	.	-	2	ID=Cattle_Y_C02884;Parent=Cattle_Y_T01679;gene_id=Cattle_Y_G00974;transcript_id=Cattle_Y_T01679;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49412593	49412716	.	-	0	ID=Cattle_Y_C02885;Parent=Cattle_Y_T01679;gene_id=Cattle_Y_G00974;transcript_id=Cattle_Y_T01679;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49440575	49442805	.	-	.	ID=Cattle_Y_G00975;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00975;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	49440575	49442805	.	-	.	ID=Cattle_Y_T01680;Parent=Cattle_Y_G00975;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01680;gene_id=Cattle_Y_G00975;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	49440575	49440652	.	-	.	ID=Cattle_Y_E03290;Parent=Cattle_Y_T01680;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01680;gene_id=Cattle_Y_G00975;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	49440769	49440914	.	-	.	ID=Cattle_Y_E03291;Parent=Cattle_Y_T01680;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01680;gene_id=Cattle_Y_G00975;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	49441010	49441121	.	-	.	ID=Cattle_Y_E03292;Parent=Cattle_Y_T01680;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01680;gene_id=Cattle_Y_G00975;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	49441305	49441382	.	-	.	ID=Cattle_Y_E03293;Parent=Cattle_Y_T01680;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01680;gene_id=Cattle_Y_G00975;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	49442170	49442585	.	-	.	ID=Cattle_Y_E03294;Parent=Cattle_Y_T01680;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01680;gene_id=Cattle_Y_G00975;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	49442682	49442805	.	-	.	ID=Cattle_Y_E03295;Parent=Cattle_Y_T01680;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01680;gene_id=Cattle_Y_G00975;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	49440575	49440652	.	-	0	ID=Cattle_Y_C02886;Parent=Cattle_Y_T01680;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_15;gene_id=Cattle_Y_G00975;transcript_id=Cattle_Y_T01680;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49440769	49440914	.	-	2	ID=Cattle_Y_C02887;Parent=Cattle_Y_T01680;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_15;gene_id=Cattle_Y_G00975;transcript_id=Cattle_Y_T01680;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49441010	49441121	.	-	0	ID=Cattle_Y_C02888;Parent=Cattle_Y_T01680;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_15;gene_id=Cattle_Y_G00975;transcript_id=Cattle_Y_T01680;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49441305	49441382	.	-	0	ID=Cattle_Y_C02889;Parent=Cattle_Y_T01680;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_15;gene_id=Cattle_Y_G00975;transcript_id=Cattle_Y_T01680;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49442170	49442585	.	-	2	ID=Cattle_Y_C02890;Parent=Cattle_Y_T01680;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_15;gene_id=Cattle_Y_G00975;transcript_id=Cattle_Y_T01680;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49442682	49442805	.	-	0	ID=Cattle_Y_C02891;Parent=Cattle_Y_T01680;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_15;gene_id=Cattle_Y_G00975;transcript_id=Cattle_Y_T01680;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49448099	49450329	.	-	.	ID=Cattle_Y_G00976;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00976;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	49448099	49450329	.	-	.	ID=Cattle_Y_T01681;Parent=Cattle_Y_G00976;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01681;gene_id=Cattle_Y_G00976;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	49448099	49448176	.	-	.	ID=Cattle_Y_E03296;Parent=Cattle_Y_T01681;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01681;gene_id=Cattle_Y_G00976;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	49448293	49448438	.	-	.	ID=Cattle_Y_E03297;Parent=Cattle_Y_T01681;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01681;gene_id=Cattle_Y_G00976;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	49448534	49448645	.	-	.	ID=Cattle_Y_E03298;Parent=Cattle_Y_T01681;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01681;gene_id=Cattle_Y_G00976;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	49448829	49448906	.	-	.	ID=Cattle_Y_E03299;Parent=Cattle_Y_T01681;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01681;gene_id=Cattle_Y_G00976;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	49449694	49450109	.	-	.	ID=Cattle_Y_E03300;Parent=Cattle_Y_T01681;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01681;gene_id=Cattle_Y_G00976;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	49450206	49450329	.	-	.	ID=Cattle_Y_E03301;Parent=Cattle_Y_T01681;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01681;gene_id=Cattle_Y_G00976;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	49448099	49448176	.	-	0	ID=Cattle_Y_C02892;Parent=Cattle_Y_T01681;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_14;gene_id=Cattle_Y_G00976;transcript_id=Cattle_Y_T01681;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49448293	49448438	.	-	2	ID=Cattle_Y_C02893;Parent=Cattle_Y_T01681;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_14;gene_id=Cattle_Y_G00976;transcript_id=Cattle_Y_T01681;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49448534	49448645	.	-	0	ID=Cattle_Y_C02894;Parent=Cattle_Y_T01681;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_14;gene_id=Cattle_Y_G00976;transcript_id=Cattle_Y_T01681;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49448829	49448906	.	-	0	ID=Cattle_Y_C02895;Parent=Cattle_Y_T01681;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_14;gene_id=Cattle_Y_G00976;transcript_id=Cattle_Y_T01681;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49449694	49450109	.	-	2	ID=Cattle_Y_C02896;Parent=Cattle_Y_T01681;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_14;gene_id=Cattle_Y_G00976;transcript_id=Cattle_Y_T01681;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49450206	49450329	.	-	0	ID=Cattle_Y_C02897;Parent=Cattle_Y_T01681;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_14;gene_id=Cattle_Y_G00976;transcript_id=Cattle_Y_T01681;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49455623	49457853	.	-	.	ID=Cattle_Y_G00977;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00977;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	49455623	49457853	.	-	.	ID=Cattle_Y_T01682;Parent=Cattle_Y_G00977;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01682;gene_id=Cattle_Y_G00977;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	49455623	49455700	.	-	.	ID=Cattle_Y_E03302;Parent=Cattle_Y_T01682;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01682;gene_id=Cattle_Y_G00977;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	49455817	49455962	.	-	.	ID=Cattle_Y_E03303;Parent=Cattle_Y_T01682;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01682;gene_id=Cattle_Y_G00977;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	49456058	49456169	.	-	.	ID=Cattle_Y_E03304;Parent=Cattle_Y_T01682;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01682;gene_id=Cattle_Y_G00977;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	49456353	49456430	.	-	.	ID=Cattle_Y_E03305;Parent=Cattle_Y_T01682;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01682;gene_id=Cattle_Y_G00977;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	49457218	49457633	.	-	.	ID=Cattle_Y_E03306;Parent=Cattle_Y_T01682;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01682;gene_id=Cattle_Y_G00977;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	49457730	49457853	.	-	.	ID=Cattle_Y_E03307;Parent=Cattle_Y_T01682;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01682;gene_id=Cattle_Y_G00977;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	49455623	49455700	.	-	0	ID=Cattle_Y_C02898;Parent=Cattle_Y_T01682;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_13;gene_id=Cattle_Y_G00977;transcript_id=Cattle_Y_T01682;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49455817	49455962	.	-	2	ID=Cattle_Y_C02899;Parent=Cattle_Y_T01682;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_13;gene_id=Cattle_Y_G00977;transcript_id=Cattle_Y_T01682;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49456058	49456169	.	-	0	ID=Cattle_Y_C02900;Parent=Cattle_Y_T01682;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_13;gene_id=Cattle_Y_G00977;transcript_id=Cattle_Y_T01682;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49456353	49456430	.	-	0	ID=Cattle_Y_C02901;Parent=Cattle_Y_T01682;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_13;gene_id=Cattle_Y_G00977;transcript_id=Cattle_Y_T01682;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49457218	49457633	.	-	2	ID=Cattle_Y_C02902;Parent=Cattle_Y_T01682;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_13;gene_id=Cattle_Y_G00977;transcript_id=Cattle_Y_T01682;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49457730	49457853	.	-	0	ID=Cattle_Y_C02903;Parent=Cattle_Y_T01682;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_13;gene_id=Cattle_Y_G00977;transcript_id=Cattle_Y_T01682;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49463144	49465374	.	-	.	ID=Cattle_Y_G00978;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00978;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	49463144	49465374	.	-	.	ID=Cattle_Y_T01683;Parent=Cattle_Y_G00978;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01683;gene_id=Cattle_Y_G00978;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	49463144	49463221	.	-	.	ID=Cattle_Y_E03308;Parent=Cattle_Y_T01683;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01683;gene_id=Cattle_Y_G00978;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	49463338	49463483	.	-	.	ID=Cattle_Y_E03309;Parent=Cattle_Y_T01683;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01683;gene_id=Cattle_Y_G00978;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	49463579	49463690	.	-	.	ID=Cattle_Y_E03310;Parent=Cattle_Y_T01683;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01683;gene_id=Cattle_Y_G00978;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	49463874	49463951	.	-	.	ID=Cattle_Y_E03311;Parent=Cattle_Y_T01683;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01683;gene_id=Cattle_Y_G00978;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	49464739	49465154	.	-	.	ID=Cattle_Y_E03312;Parent=Cattle_Y_T01683;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01683;gene_id=Cattle_Y_G00978;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	49465251	49465374	.	-	.	ID=Cattle_Y_E03313;Parent=Cattle_Y_T01683;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01683;gene_id=Cattle_Y_G00978;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	49463144	49463221	.	-	0	ID=Cattle_Y_C02904;Parent=Cattle_Y_T01683;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_17;gene_id=Cattle_Y_G00978;transcript_id=Cattle_Y_T01683;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49463338	49463483	.	-	2	ID=Cattle_Y_C02905;Parent=Cattle_Y_T01683;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_17;gene_id=Cattle_Y_G00978;transcript_id=Cattle_Y_T01683;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49463579	49463690	.	-	0	ID=Cattle_Y_C02906;Parent=Cattle_Y_T01683;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_17;gene_id=Cattle_Y_G00978;transcript_id=Cattle_Y_T01683;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49463874	49463951	.	-	0	ID=Cattle_Y_C02907;Parent=Cattle_Y_T01683;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_17;gene_id=Cattle_Y_G00978;transcript_id=Cattle_Y_T01683;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49464739	49465154	.	-	2	ID=Cattle_Y_C02908;Parent=Cattle_Y_T01683;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_17;gene_id=Cattle_Y_G00978;transcript_id=Cattle_Y_T01683;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49465251	49465374	.	-	0	ID=Cattle_Y_C02909;Parent=Cattle_Y_T01683;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_17;gene_id=Cattle_Y_G00978;transcript_id=Cattle_Y_T01683;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49470668	49472790	.	-	.	ID=Cattle_Y_G00979;Dbxref=GeneID:132344575;Name=LOC132344575;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344575;gene_biotype=protein_coding;partial=true;start_range=.,9228925;gene_id=Cattle_Y_G00979;source_id=gene-LOC132344575
haplotype2-0000357	CAT	mRNA	49470668	49472790	.	-	.	ID=Cattle_Y_T01684;Parent=Cattle_Y_G00979;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;Name=XM_059884240.1;gbkey=mRNA;gene=LOC132344575;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01684;gene_id=Cattle_Y_G00979;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884240.1
haplotype2-0000357	CAT	exon	49470668	49470745	.	-	.	ID=Cattle_Y_E03314;Parent=Cattle_Y_T01684;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01684;gene_id=Cattle_Y_G00979;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-6
haplotype2-0000357	CAT	exon	49470862	49471007	.	-	.	ID=Cattle_Y_E03315;Parent=Cattle_Y_T01684;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01684;gene_id=Cattle_Y_G00979;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-5
haplotype2-0000357	CAT	exon	49471103	49471214	.	-	.	ID=Cattle_Y_E03316;Parent=Cattle_Y_T01684;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01684;gene_id=Cattle_Y_G00979;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-4
haplotype2-0000357	CAT	exon	49471398	49471475	.	-	.	ID=Cattle_Y_E03317;Parent=Cattle_Y_T01684;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01684;gene_id=Cattle_Y_G00979;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-3
haplotype2-0000357	CAT	exon	49472263	49472678	.	-	.	ID=Cattle_Y_E03318;Parent=Cattle_Y_T01684;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01684;gene_id=Cattle_Y_G00979;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-2
haplotype2-0000357	CAT	exon	49472775	49472790	.	-	.	ID=Cattle_Y_E03319;Parent=Cattle_Y_T01684;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01684;gene_id=Cattle_Y_G00979;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-1
haplotype2-0000357	CAT	CDS	49470668	49470745	.	-	0	ID=Cattle_Y_C02910;Parent=Cattle_Y_T01684;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_9;gene_id=Cattle_Y_G00979;transcript_id=Cattle_Y_T01684;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49470862	49471007	.	-	2	ID=Cattle_Y_C02911;Parent=Cattle_Y_T01684;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_9;gene_id=Cattle_Y_G00979;transcript_id=Cattle_Y_T01684;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49471103	49471214	.	-	0	ID=Cattle_Y_C02912;Parent=Cattle_Y_T01684;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_9;gene_id=Cattle_Y_G00979;transcript_id=Cattle_Y_T01684;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49471398	49471475	.	-	0	ID=Cattle_Y_C02913;Parent=Cattle_Y_T01684;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_9;gene_id=Cattle_Y_G00979;transcript_id=Cattle_Y_T01684;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49472263	49472678	.	-	2	ID=Cattle_Y_C02914;Parent=Cattle_Y_T01684;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_9;gene_id=Cattle_Y_G00979;transcript_id=Cattle_Y_T01684;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49472775	49472790	.	-	0	ID=Cattle_Y_C02915;Parent=Cattle_Y_T01684;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_9;start_range=.,9228925;gene_id=Cattle_Y_G00979;transcript_id=Cattle_Y_T01684;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49478192	49480324	.	-	.	ID=Cattle_Y_G00980;Dbxref=GeneID:132344575;Name=LOC132344575;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344575;gene_biotype=protein_coding;partial=true;start_range=.,9228925;gene_id=Cattle_Y_G00980;source_id=gene-LOC132344575
haplotype2-0000357	CAT	mRNA	49478192	49480324	.	-	.	ID=Cattle_Y_T01685;Parent=Cattle_Y_G00980;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;Name=XM_059884240.1;gbkey=mRNA;gene=LOC132344575;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01685;gene_id=Cattle_Y_G00980;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884240.1
haplotype2-0000357	CAT	exon	49478192	49478269	.	-	.	ID=Cattle_Y_E03320;Parent=Cattle_Y_T01685;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01685;gene_id=Cattle_Y_G00980;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-6
haplotype2-0000357	CAT	exon	49478386	49478531	.	-	.	ID=Cattle_Y_E03321;Parent=Cattle_Y_T01685;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01685;gene_id=Cattle_Y_G00980;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-5
haplotype2-0000357	CAT	exon	49478627	49478738	.	-	.	ID=Cattle_Y_E03322;Parent=Cattle_Y_T01685;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01685;gene_id=Cattle_Y_G00980;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-4
haplotype2-0000357	CAT	exon	49478922	49478999	.	-	.	ID=Cattle_Y_E03323;Parent=Cattle_Y_T01685;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01685;gene_id=Cattle_Y_G00980;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-3
haplotype2-0000357	CAT	exon	49479797	49480212	.	-	.	ID=Cattle_Y_E03324;Parent=Cattle_Y_T01685;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01685;gene_id=Cattle_Y_G00980;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-2
haplotype2-0000357	CAT	exon	49480309	49480324	.	-	.	ID=Cattle_Y_E03325;Parent=Cattle_Y_T01685;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01685;gene_id=Cattle_Y_G00980;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-1
haplotype2-0000357	CAT	CDS	49478192	49478269	.	-	0	ID=Cattle_Y_C02916;Parent=Cattle_Y_T01685;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_3;gene_id=Cattle_Y_G00980;transcript_id=Cattle_Y_T01685;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49478386	49478531	.	-	2	ID=Cattle_Y_C02917;Parent=Cattle_Y_T01685;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_3;gene_id=Cattle_Y_G00980;transcript_id=Cattle_Y_T01685;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49478627	49478738	.	-	0	ID=Cattle_Y_C02918;Parent=Cattle_Y_T01685;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_3;gene_id=Cattle_Y_G00980;transcript_id=Cattle_Y_T01685;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49478922	49478999	.	-	0	ID=Cattle_Y_C02919;Parent=Cattle_Y_T01685;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_3;gene_id=Cattle_Y_G00980;transcript_id=Cattle_Y_T01685;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49479797	49480212	.	-	2	ID=Cattle_Y_C02920;Parent=Cattle_Y_T01685;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_3;gene_id=Cattle_Y_G00980;transcript_id=Cattle_Y_T01685;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49480309	49480324	.	-	0	ID=Cattle_Y_C02921;Parent=Cattle_Y_T01685;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_3;start_range=.,9228925;gene_id=Cattle_Y_G00980;transcript_id=Cattle_Y_T01685;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49485726	49487848	.	-	.	ID=Cattle_Y_G00981;Dbxref=GeneID:132344575;Name=LOC132344575;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344575;gene_biotype=protein_coding;partial=true;start_range=.,9228925;gene_id=Cattle_Y_G00981;source_id=gene-LOC132344575
haplotype2-0000357	CAT	mRNA	49485726	49487848	.	-	.	ID=Cattle_Y_T01686;Parent=Cattle_Y_G00981;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;Name=XM_059884240.1;gbkey=mRNA;gene=LOC132344575;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01686;gene_id=Cattle_Y_G00981;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884240.1
haplotype2-0000357	CAT	exon	49485726	49485803	.	-	.	ID=Cattle_Y_E03326;Parent=Cattle_Y_T01686;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01686;gene_id=Cattle_Y_G00981;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-6
haplotype2-0000357	CAT	exon	49485920	49486065	.	-	.	ID=Cattle_Y_E03327;Parent=Cattle_Y_T01686;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01686;gene_id=Cattle_Y_G00981;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-5
haplotype2-0000357	CAT	exon	49486161	49486272	.	-	.	ID=Cattle_Y_E03328;Parent=Cattle_Y_T01686;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01686;gene_id=Cattle_Y_G00981;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-4
haplotype2-0000357	CAT	exon	49486456	49486533	.	-	.	ID=Cattle_Y_E03329;Parent=Cattle_Y_T01686;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01686;gene_id=Cattle_Y_G00981;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-3
haplotype2-0000357	CAT	exon	49487321	49487736	.	-	.	ID=Cattle_Y_E03330;Parent=Cattle_Y_T01686;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01686;gene_id=Cattle_Y_G00981;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-2
haplotype2-0000357	CAT	exon	49487833	49487848	.	-	.	ID=Cattle_Y_E03331;Parent=Cattle_Y_T01686;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01686;gene_id=Cattle_Y_G00981;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-1
haplotype2-0000357	CAT	CDS	49485726	49485803	.	-	0	ID=Cattle_Y_C02922;Parent=Cattle_Y_T01686;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_10;gene_id=Cattle_Y_G00981;transcript_id=Cattle_Y_T01686;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49485920	49486065	.	-	2	ID=Cattle_Y_C02923;Parent=Cattle_Y_T01686;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_10;gene_id=Cattle_Y_G00981;transcript_id=Cattle_Y_T01686;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49486161	49486272	.	-	0	ID=Cattle_Y_C02924;Parent=Cattle_Y_T01686;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_10;gene_id=Cattle_Y_G00981;transcript_id=Cattle_Y_T01686;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49486456	49486533	.	-	0	ID=Cattle_Y_C02925;Parent=Cattle_Y_T01686;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_10;gene_id=Cattle_Y_G00981;transcript_id=Cattle_Y_T01686;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49487321	49487736	.	-	2	ID=Cattle_Y_C02926;Parent=Cattle_Y_T01686;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_10;gene_id=Cattle_Y_G00981;transcript_id=Cattle_Y_T01686;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49487833	49487848	.	-	0	ID=Cattle_Y_C02927;Parent=Cattle_Y_T01686;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_10;start_range=.,9228925;gene_id=Cattle_Y_G00981;transcript_id=Cattle_Y_T01686;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49493251	49495481	.	-	.	ID=Cattle_Y_G00982;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00982;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	49493251	49495481	.	-	.	ID=Cattle_Y_T01687;Parent=Cattle_Y_G00982;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01687;gene_id=Cattle_Y_G00982;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	49493251	49493328	.	-	.	ID=Cattle_Y_E03332;Parent=Cattle_Y_T01687;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01687;gene_id=Cattle_Y_G00982;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	49493445	49493590	.	-	.	ID=Cattle_Y_E03333;Parent=Cattle_Y_T01687;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01687;gene_id=Cattle_Y_G00982;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	49493686	49493797	.	-	.	ID=Cattle_Y_E03334;Parent=Cattle_Y_T01687;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01687;gene_id=Cattle_Y_G00982;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	49493981	49494058	.	-	.	ID=Cattle_Y_E03335;Parent=Cattle_Y_T01687;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01687;gene_id=Cattle_Y_G00982;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	49494846	49495261	.	-	.	ID=Cattle_Y_E03336;Parent=Cattle_Y_T01687;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01687;gene_id=Cattle_Y_G00982;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	49495358	49495481	.	-	.	ID=Cattle_Y_E03337;Parent=Cattle_Y_T01687;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01687;gene_id=Cattle_Y_G00982;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	49493251	49493328	.	-	0	ID=Cattle_Y_C02928;Parent=Cattle_Y_T01687;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_20;gene_id=Cattle_Y_G00982;transcript_id=Cattle_Y_T01687;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49493445	49493590	.	-	2	ID=Cattle_Y_C02929;Parent=Cattle_Y_T01687;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_20;gene_id=Cattle_Y_G00982;transcript_id=Cattle_Y_T01687;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49493686	49493797	.	-	0	ID=Cattle_Y_C02930;Parent=Cattle_Y_T01687;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_20;gene_id=Cattle_Y_G00982;transcript_id=Cattle_Y_T01687;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49493981	49494058	.	-	0	ID=Cattle_Y_C02931;Parent=Cattle_Y_T01687;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_20;gene_id=Cattle_Y_G00982;transcript_id=Cattle_Y_T01687;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49494846	49495261	.	-	2	ID=Cattle_Y_C02932;Parent=Cattle_Y_T01687;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_20;gene_id=Cattle_Y_G00982;transcript_id=Cattle_Y_T01687;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49495358	49495481	.	-	0	ID=Cattle_Y_C02933;Parent=Cattle_Y_T01687;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_20;gene_id=Cattle_Y_G00982;transcript_id=Cattle_Y_T01687;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49500777	49503017	.	-	.	ID=Cattle_Y_G00983;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00983;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	49500777	49503017	.	-	.	ID=Cattle_Y_T01688;Parent=Cattle_Y_G00983;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01688;gene_id=Cattle_Y_G00983;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	49500777	49500854	.	-	.	ID=Cattle_Y_E03338;Parent=Cattle_Y_T01688;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01688;gene_id=Cattle_Y_G00983;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	49500971	49501116	.	-	.	ID=Cattle_Y_E03339;Parent=Cattle_Y_T01688;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01688;gene_id=Cattle_Y_G00983;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	49501212	49501323	.	-	.	ID=Cattle_Y_E03340;Parent=Cattle_Y_T01688;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01688;gene_id=Cattle_Y_G00983;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	49501507	49501584	.	-	.	ID=Cattle_Y_E03341;Parent=Cattle_Y_T01688;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01688;gene_id=Cattle_Y_G00983;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	49502382	49502797	.	-	.	ID=Cattle_Y_E03342;Parent=Cattle_Y_T01688;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01688;gene_id=Cattle_Y_G00983;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	49502894	49503017	.	-	.	ID=Cattle_Y_E03343;Parent=Cattle_Y_T01688;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01688;gene_id=Cattle_Y_G00983;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	49500777	49500854	.	-	0	ID=Cattle_Y_C02934;Parent=Cattle_Y_T01688;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_26;gene_id=Cattle_Y_G00983;transcript_id=Cattle_Y_T01688;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49500971	49501116	.	-	2	ID=Cattle_Y_C02935;Parent=Cattle_Y_T01688;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_26;gene_id=Cattle_Y_G00983;transcript_id=Cattle_Y_T01688;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49501212	49501323	.	-	0	ID=Cattle_Y_C02936;Parent=Cattle_Y_T01688;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_26;gene_id=Cattle_Y_G00983;transcript_id=Cattle_Y_T01688;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49501507	49501584	.	-	0	ID=Cattle_Y_C02937;Parent=Cattle_Y_T01688;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_26;gene_id=Cattle_Y_G00983;transcript_id=Cattle_Y_T01688;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49502382	49502797	.	-	2	ID=Cattle_Y_C02938;Parent=Cattle_Y_T01688;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_26;gene_id=Cattle_Y_G00983;transcript_id=Cattle_Y_T01688;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49502894	49503017	.	-	0	ID=Cattle_Y_C02939;Parent=Cattle_Y_T01688;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_26;gene_id=Cattle_Y_G00983;transcript_id=Cattle_Y_T01688;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49508315	49510447	.	-	.	ID=Cattle_Y_G00984;Dbxref=GeneID:132344575;Name=LOC132344575;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344575;gene_biotype=protein_coding;partial=true;start_range=.,9228925;gene_id=Cattle_Y_G00984;source_id=gene-LOC132344575
haplotype2-0000357	CAT	mRNA	49508315	49510447	.	-	.	ID=Cattle_Y_T01689;Parent=Cattle_Y_G00984;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;Name=XM_059884240.1;gbkey=mRNA;gene=LOC132344575;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01689;gene_id=Cattle_Y_G00984;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884240.1
haplotype2-0000357	CAT	exon	49508315	49508392	.	-	.	ID=Cattle_Y_E03344;Parent=Cattle_Y_T01689;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01689;gene_id=Cattle_Y_G00984;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-6
haplotype2-0000357	CAT	exon	49508509	49508654	.	-	.	ID=Cattle_Y_E03345;Parent=Cattle_Y_T01689;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01689;gene_id=Cattle_Y_G00984;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-5
haplotype2-0000357	CAT	exon	49508750	49508861	.	-	.	ID=Cattle_Y_E03346;Parent=Cattle_Y_T01689;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01689;gene_id=Cattle_Y_G00984;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-4
haplotype2-0000357	CAT	exon	49509045	49509122	.	-	.	ID=Cattle_Y_E03347;Parent=Cattle_Y_T01689;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01689;gene_id=Cattle_Y_G00984;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-3
haplotype2-0000357	CAT	exon	49509920	49510335	.	-	.	ID=Cattle_Y_E03348;Parent=Cattle_Y_T01689;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01689;gene_id=Cattle_Y_G00984;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-2
haplotype2-0000357	CAT	exon	49510432	49510447	.	-	.	ID=Cattle_Y_E03349;Parent=Cattle_Y_T01689;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01689;gene_id=Cattle_Y_G00984;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-1
haplotype2-0000357	CAT	CDS	49508315	49508392	.	-	0	ID=Cattle_Y_C02940;Parent=Cattle_Y_T01689;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_6;gene_id=Cattle_Y_G00984;transcript_id=Cattle_Y_T01689;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49508509	49508654	.	-	2	ID=Cattle_Y_C02941;Parent=Cattle_Y_T01689;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_6;gene_id=Cattle_Y_G00984;transcript_id=Cattle_Y_T01689;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49508750	49508861	.	-	0	ID=Cattle_Y_C02942;Parent=Cattle_Y_T01689;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_6;gene_id=Cattle_Y_G00984;transcript_id=Cattle_Y_T01689;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49509045	49509122	.	-	0	ID=Cattle_Y_C02943;Parent=Cattle_Y_T01689;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_6;gene_id=Cattle_Y_G00984;transcript_id=Cattle_Y_T01689;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49509920	49510335	.	-	2	ID=Cattle_Y_C02944;Parent=Cattle_Y_T01689;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_6;gene_id=Cattle_Y_G00984;transcript_id=Cattle_Y_T01689;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49510432	49510447	.	-	0	ID=Cattle_Y_C02945;Parent=Cattle_Y_T01689;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_6;start_range=.,9228925;gene_id=Cattle_Y_G00984;transcript_id=Cattle_Y_T01689;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49515840	49518070	.	-	.	ID=Cattle_Y_G00985;Dbxref=GeneID:132344611;Name=LOC132344611;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344611;gene_biotype=protein_coding;gene_id=Cattle_Y_G00985;source_id=gene-LOC132344611
haplotype2-0000357	CAT	mRNA	49515840	49518070	.	-	.	ID=Cattle_Y_T01690;Parent=Cattle_Y_G00985;Dbxref=GeneID:132344611,GenBank:XM_059884277.1;Name=XM_059884277.1;gbkey=mRNA;gene=LOC132344611;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01690;gene_id=Cattle_Y_G00985;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884277.1
haplotype2-0000357	CAT	exon	49515840	49515917	.	-	.	ID=Cattle_Y_E03350;Parent=Cattle_Y_T01690;Dbxref=GeneID:132344611,GenBank:XM_059884277.1;gbkey=mRNA;gene=LOC132344611;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01690;gene_id=Cattle_Y_G00985;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884277.1-6
haplotype2-0000357	CAT	exon	49516034	49516179	.	-	.	ID=Cattle_Y_E03351;Parent=Cattle_Y_T01690;Dbxref=GeneID:132344611,GenBank:XM_059884277.1;gbkey=mRNA;gene=LOC132344611;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01690;gene_id=Cattle_Y_G00985;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884277.1-5
haplotype2-0000357	CAT	exon	49516275	49516386	.	-	.	ID=Cattle_Y_E03352;Parent=Cattle_Y_T01690;Dbxref=GeneID:132344611,GenBank:XM_059884277.1;gbkey=mRNA;gene=LOC132344611;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01690;gene_id=Cattle_Y_G00985;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884277.1-4
haplotype2-0000357	CAT	exon	49516570	49516647	.	-	.	ID=Cattle_Y_E03353;Parent=Cattle_Y_T01690;Dbxref=GeneID:132344611,GenBank:XM_059884277.1;gbkey=mRNA;gene=LOC132344611;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01690;gene_id=Cattle_Y_G00985;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884277.1-3
haplotype2-0000357	CAT	exon	49517435	49517850	.	-	.	ID=Cattle_Y_E03354;Parent=Cattle_Y_T01690;Dbxref=GeneID:132344611,GenBank:XM_059884277.1;gbkey=mRNA;gene=LOC132344611;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01690;gene_id=Cattle_Y_G00985;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884277.1-2
haplotype2-0000357	CAT	exon	49517947	49518070	.	-	.	ID=Cattle_Y_E03355;Parent=Cattle_Y_T01690;Dbxref=GeneID:132344611,GenBank:XM_059884277.1;gbkey=mRNA;gene=LOC132344611;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01690;gene_id=Cattle_Y_G00985;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884277.1-1
haplotype2-0000357	CAT	CDS	49515840	49515917	.	-	0	ID=Cattle_Y_C02946;Parent=Cattle_Y_T01690;Dbxref=GeneID:132344611,GenBank:XP_059740260.1;Name=XP_059740260.1;gbkey=CDS;gene=LOC132344611;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740260.1_1;gene_id=Cattle_Y_G00985;transcript_id=Cattle_Y_T01690;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49516034	49516179	.	-	2	ID=Cattle_Y_C02947;Parent=Cattle_Y_T01690;Dbxref=GeneID:132344611,GenBank:XP_059740260.1;Name=XP_059740260.1;gbkey=CDS;gene=LOC132344611;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740260.1_1;gene_id=Cattle_Y_G00985;transcript_id=Cattle_Y_T01690;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49516275	49516386	.	-	0	ID=Cattle_Y_C02948;Parent=Cattle_Y_T01690;Dbxref=GeneID:132344611,GenBank:XP_059740260.1;Name=XP_059740260.1;gbkey=CDS;gene=LOC132344611;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740260.1_1;gene_id=Cattle_Y_G00985;transcript_id=Cattle_Y_T01690;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49516570	49516647	.	-	0	ID=Cattle_Y_C02949;Parent=Cattle_Y_T01690;Dbxref=GeneID:132344611,GenBank:XP_059740260.1;Name=XP_059740260.1;gbkey=CDS;gene=LOC132344611;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740260.1_1;gene_id=Cattle_Y_G00985;transcript_id=Cattle_Y_T01690;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49517435	49517850	.	-	2	ID=Cattle_Y_C02950;Parent=Cattle_Y_T01690;Dbxref=GeneID:132344611,GenBank:XP_059740260.1;Name=XP_059740260.1;gbkey=CDS;gene=LOC132344611;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740260.1_1;gene_id=Cattle_Y_G00985;transcript_id=Cattle_Y_T01690;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49517947	49518070	.	-	0	ID=Cattle_Y_C02951;Parent=Cattle_Y_T01690;Dbxref=GeneID:132344611,GenBank:XP_059740260.1;Name=XP_059740260.1;gbkey=CDS;gene=LOC132344611;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740260.1_1;gene_id=Cattle_Y_G00985;transcript_id=Cattle_Y_T01690;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49523355	49525595	1651	-	.	ID=Cattle_Y_G00986;Dbxref=BGD:BT19054,GeneID:281554;Name=TSPY;description=testis specific protein%2C Y-linked 1;gbkey=Gene;gene=TSPY;gene_biotype=protein_coding;gene_synonym=TSPY-M1,TSPY1;gene_id=Cattle_Y_G00986;source_id=gene-TSPY
haplotype2-0000357	CAT	mRNA	49523355	49525595	1651	-	.	ID=Cattle_Y_T01691;Parent=Cattle_Y_G00986;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Name=NM_001244608.1;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein%2C Y-linked 1;transcript_id=Cattle_Y_T01691;gene_id=Cattle_Y_G00986;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001244608.1
haplotype2-0000357	CAT	exon	49523355	49523432	135	-	0	ID=Cattle_Y_E03356;Parent=Cattle_Y_T01691;gene_id=Cattle_Y_G00986;transcript_id=Cattle_Y_T01691;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49523549	49523694	270	-	2	ID=Cattle_Y_E03357;Parent=Cattle_Y_T01691;gene_id=Cattle_Y_G00986;transcript_id=Cattle_Y_T01691;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49523790	49523901	203	-	0	ID=Cattle_Y_E03358;Parent=Cattle_Y_T01691;gene_id=Cattle_Y_G00986;transcript_id=Cattle_Y_T01691;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49524085	49524162	133	-	0	ID=Cattle_Y_E03359;Parent=Cattle_Y_T01691;gene_id=Cattle_Y_G00986;transcript_id=Cattle_Y_T01691;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49524960	49525375	692	-	2	ID=Cattle_Y_E03360;Parent=Cattle_Y_T01691;gene_id=Cattle_Y_G00986;transcript_id=Cattle_Y_T01691;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49525472	49525595	218	-	0	ID=Cattle_Y_E03361;Parent=Cattle_Y_T01691;gene_id=Cattle_Y_G00986;transcript_id=Cattle_Y_T01691;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49523355	49523432	135	-	0	ID=Cattle_Y_C02952;Parent=Cattle_Y_T01691;gene_id=Cattle_Y_G00986;transcript_id=Cattle_Y_T01691;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49523549	49523694	270	-	2	ID=Cattle_Y_C02953;Parent=Cattle_Y_T01691;gene_id=Cattle_Y_G00986;transcript_id=Cattle_Y_T01691;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49523790	49523901	203	-	0	ID=Cattle_Y_C02954;Parent=Cattle_Y_T01691;gene_id=Cattle_Y_G00986;transcript_id=Cattle_Y_T01691;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49524085	49524162	133	-	0	ID=Cattle_Y_C02955;Parent=Cattle_Y_T01691;gene_id=Cattle_Y_G00986;transcript_id=Cattle_Y_T01691;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49524960	49525375	692	-	2	ID=Cattle_Y_C02956;Parent=Cattle_Y_T01691;gene_id=Cattle_Y_G00986;transcript_id=Cattle_Y_T01691;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49525472	49525595	218	-	0	ID=Cattle_Y_C02957;Parent=Cattle_Y_T01691;gene_id=Cattle_Y_G00986;transcript_id=Cattle_Y_T01691;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49530887	49533117	.	-	.	ID=Cattle_Y_G00987;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00987;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	49530887	49533117	.	-	.	ID=Cattle_Y_T01692;Parent=Cattle_Y_G00987;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01692;gene_id=Cattle_Y_G00987;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	49530887	49530964	.	-	.	ID=Cattle_Y_E03362;Parent=Cattle_Y_T01692;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01692;gene_id=Cattle_Y_G00987;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	49531081	49531226	.	-	.	ID=Cattle_Y_E03363;Parent=Cattle_Y_T01692;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01692;gene_id=Cattle_Y_G00987;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	49531322	49531433	.	-	.	ID=Cattle_Y_E03364;Parent=Cattle_Y_T01692;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01692;gene_id=Cattle_Y_G00987;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	49531617	49531694	.	-	.	ID=Cattle_Y_E03365;Parent=Cattle_Y_T01692;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01692;gene_id=Cattle_Y_G00987;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	49532482	49532897	.	-	.	ID=Cattle_Y_E03366;Parent=Cattle_Y_T01692;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01692;gene_id=Cattle_Y_G00987;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	49532994	49533117	.	-	.	ID=Cattle_Y_E03367;Parent=Cattle_Y_T01692;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01692;gene_id=Cattle_Y_G00987;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	49530887	49530964	.	-	0	ID=Cattle_Y_C02958;Parent=Cattle_Y_T01692;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_16;gene_id=Cattle_Y_G00987;transcript_id=Cattle_Y_T01692;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49531081	49531226	.	-	2	ID=Cattle_Y_C02959;Parent=Cattle_Y_T01692;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_16;gene_id=Cattle_Y_G00987;transcript_id=Cattle_Y_T01692;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49531322	49531433	.	-	0	ID=Cattle_Y_C02960;Parent=Cattle_Y_T01692;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_16;gene_id=Cattle_Y_G00987;transcript_id=Cattle_Y_T01692;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49531617	49531694	.	-	0	ID=Cattle_Y_C02961;Parent=Cattle_Y_T01692;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_16;gene_id=Cattle_Y_G00987;transcript_id=Cattle_Y_T01692;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49532482	49532897	.	-	2	ID=Cattle_Y_C02962;Parent=Cattle_Y_T01692;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_16;gene_id=Cattle_Y_G00987;transcript_id=Cattle_Y_T01692;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49532994	49533117	.	-	0	ID=Cattle_Y_C02963;Parent=Cattle_Y_T01692;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_16;gene_id=Cattle_Y_G00987;transcript_id=Cattle_Y_T01692;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49545943	49548181	.	-	.	ID=Cattle_Y_G00988;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00988;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	49545943	49548181	.	-	.	ID=Cattle_Y_T01693;Parent=Cattle_Y_G00988;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01693;gene_id=Cattle_Y_G00988;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	49545943	49546020	.	-	.	ID=Cattle_Y_E03368;Parent=Cattle_Y_T01693;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01693;gene_id=Cattle_Y_G00988;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	49546137	49546282	.	-	.	ID=Cattle_Y_E03369;Parent=Cattle_Y_T01693;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01693;gene_id=Cattle_Y_G00988;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	49546378	49546489	.	-	.	ID=Cattle_Y_E03370;Parent=Cattle_Y_T01693;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01693;gene_id=Cattle_Y_G00988;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	49546673	49546750	.	-	.	ID=Cattle_Y_E03371;Parent=Cattle_Y_T01693;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01693;gene_id=Cattle_Y_G00988;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	49547546	49547961	.	-	.	ID=Cattle_Y_E03372;Parent=Cattle_Y_T01693;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01693;gene_id=Cattle_Y_G00988;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	49548058	49548181	.	-	.	ID=Cattle_Y_E03373;Parent=Cattle_Y_T01693;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01693;gene_id=Cattle_Y_G00988;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	49545943	49546020	.	-	0	ID=Cattle_Y_C02964;Parent=Cattle_Y_T01693;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_23;gene_id=Cattle_Y_G00988;transcript_id=Cattle_Y_T01693;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49546137	49546282	.	-	2	ID=Cattle_Y_C02965;Parent=Cattle_Y_T01693;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_23;gene_id=Cattle_Y_G00988;transcript_id=Cattle_Y_T01693;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49546378	49546489	.	-	0	ID=Cattle_Y_C02966;Parent=Cattle_Y_T01693;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_23;gene_id=Cattle_Y_G00988;transcript_id=Cattle_Y_T01693;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49546673	49546750	.	-	0	ID=Cattle_Y_C02967;Parent=Cattle_Y_T01693;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_23;gene_id=Cattle_Y_G00988;transcript_id=Cattle_Y_T01693;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49547546	49547961	.	-	2	ID=Cattle_Y_C02968;Parent=Cattle_Y_T01693;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_23;gene_id=Cattle_Y_G00988;transcript_id=Cattle_Y_T01693;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49548058	49548181	.	-	0	ID=Cattle_Y_C02969;Parent=Cattle_Y_T01693;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_23;gene_id=Cattle_Y_G00988;transcript_id=Cattle_Y_T01693;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49553474	49555604	.	-	.	ID=Cattle_Y_G00989;Dbxref=GeneID:132344575;Name=LOC132344575;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344575;gene_biotype=protein_coding;partial=true;start_range=.,9228925;gene_id=Cattle_Y_G00989;source_id=gene-LOC132344575
haplotype2-0000357	CAT	mRNA	49553474	49555604	.	-	.	ID=Cattle_Y_T01694;Parent=Cattle_Y_G00989;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;Name=XM_059884240.1;gbkey=mRNA;gene=LOC132344575;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01694;gene_id=Cattle_Y_G00989;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884240.1
haplotype2-0000357	CAT	exon	49553474	49553551	.	-	.	ID=Cattle_Y_E03374;Parent=Cattle_Y_T01694;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01694;gene_id=Cattle_Y_G00989;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-6
haplotype2-0000357	CAT	exon	49553668	49553813	.	-	.	ID=Cattle_Y_E03375;Parent=Cattle_Y_T01694;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01694;gene_id=Cattle_Y_G00989;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-5
haplotype2-0000357	CAT	exon	49553909	49554020	.	-	.	ID=Cattle_Y_E03376;Parent=Cattle_Y_T01694;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01694;gene_id=Cattle_Y_G00989;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-4
haplotype2-0000357	CAT	exon	49554204	49554281	.	-	.	ID=Cattle_Y_E03377;Parent=Cattle_Y_T01694;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01694;gene_id=Cattle_Y_G00989;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-3
haplotype2-0000357	CAT	exon	49555077	49555492	.	-	.	ID=Cattle_Y_E03378;Parent=Cattle_Y_T01694;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01694;gene_id=Cattle_Y_G00989;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-2
haplotype2-0000357	CAT	exon	49555589	49555604	.	-	.	ID=Cattle_Y_E03379;Parent=Cattle_Y_T01694;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01694;gene_id=Cattle_Y_G00989;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-1
haplotype2-0000357	CAT	CDS	49553474	49553551	.	-	0	ID=Cattle_Y_C02970;Parent=Cattle_Y_T01694;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_14;gene_id=Cattle_Y_G00989;transcript_id=Cattle_Y_T01694;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49553668	49553813	.	-	2	ID=Cattle_Y_C02971;Parent=Cattle_Y_T01694;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_14;gene_id=Cattle_Y_G00989;transcript_id=Cattle_Y_T01694;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49553909	49554020	.	-	0	ID=Cattle_Y_C02972;Parent=Cattle_Y_T01694;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_14;gene_id=Cattle_Y_G00989;transcript_id=Cattle_Y_T01694;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49554204	49554281	.	-	0	ID=Cattle_Y_C02973;Parent=Cattle_Y_T01694;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_14;gene_id=Cattle_Y_G00989;transcript_id=Cattle_Y_T01694;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49555077	49555492	.	-	2	ID=Cattle_Y_C02974;Parent=Cattle_Y_T01694;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_14;gene_id=Cattle_Y_G00989;transcript_id=Cattle_Y_T01694;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49555589	49555604	.	-	0	ID=Cattle_Y_C02975;Parent=Cattle_Y_T01694;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_14;start_range=.,9228925;gene_id=Cattle_Y_G00989;transcript_id=Cattle_Y_T01694;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49561006	49563136	.	-	.	ID=Cattle_Y_G00990;Dbxref=GeneID:132344576;Name=LOC132344576;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344576;gene_biotype=protein_coding;partial=true;start_range=.,9236322;gene_id=Cattle_Y_G00990;source_id=gene-LOC132344576
haplotype2-0000357	CAT	mRNA	49561006	49563136	.	-	.	ID=Cattle_Y_T01695;Parent=Cattle_Y_G00990;Dbxref=GeneID:132344576,GenBank:XM_059884241.1;Name=XM_059884241.1;gbkey=mRNA;gene=LOC132344576;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9236322;transcript_id=Cattle_Y_T01695;gene_id=Cattle_Y_G00990;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884241.1
haplotype2-0000357	CAT	exon	49561006	49561083	.	-	.	ID=Cattle_Y_E03380;Parent=Cattle_Y_T01695;Dbxref=GeneID:132344576,GenBank:XM_059884241.1;gbkey=mRNA;gene=LOC132344576;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01695;gene_id=Cattle_Y_G00990;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884241.1-6
haplotype2-0000357	CAT	exon	49561200	49561345	.	-	.	ID=Cattle_Y_E03381;Parent=Cattle_Y_T01695;Dbxref=GeneID:132344576,GenBank:XM_059884241.1;gbkey=mRNA;gene=LOC132344576;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01695;gene_id=Cattle_Y_G00990;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884241.1-5
haplotype2-0000357	CAT	exon	49561441	49561552	.	-	.	ID=Cattle_Y_E03382;Parent=Cattle_Y_T01695;Dbxref=GeneID:132344576,GenBank:XM_059884241.1;gbkey=mRNA;gene=LOC132344576;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01695;gene_id=Cattle_Y_G00990;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884241.1-4
haplotype2-0000357	CAT	exon	49561736	49561813	.	-	.	ID=Cattle_Y_E03383;Parent=Cattle_Y_T01695;Dbxref=GeneID:132344576,GenBank:XM_059884241.1;gbkey=mRNA;gene=LOC132344576;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01695;gene_id=Cattle_Y_G00990;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884241.1-3
haplotype2-0000357	CAT	exon	49562609	49563024	.	-	.	ID=Cattle_Y_E03384;Parent=Cattle_Y_T01695;Dbxref=GeneID:132344576,GenBank:XM_059884241.1;gbkey=mRNA;gene=LOC132344576;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01695;gene_id=Cattle_Y_G00990;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884241.1-2
haplotype2-0000357	CAT	exon	49563121	49563136	.	-	.	ID=Cattle_Y_E03385;Parent=Cattle_Y_T01695;Dbxref=GeneID:132344576,GenBank:XM_059884241.1;gbkey=mRNA;gene=LOC132344576;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9236322;transcript_id=Cattle_Y_T01695;gene_id=Cattle_Y_G00990;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884241.1-1
haplotype2-0000357	CAT	CDS	49561006	49561083	.	-	0	ID=Cattle_Y_C02976;Parent=Cattle_Y_T01695;Dbxref=GeneID:132344576,GenBank:XP_059740224.1;Name=XP_059740224.1;gbkey=CDS;gene=LOC132344576;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740224.1_1;gene_id=Cattle_Y_G00990;transcript_id=Cattle_Y_T01695;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49561200	49561345	.	-	2	ID=Cattle_Y_C02977;Parent=Cattle_Y_T01695;Dbxref=GeneID:132344576,GenBank:XP_059740224.1;Name=XP_059740224.1;gbkey=CDS;gene=LOC132344576;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740224.1_1;gene_id=Cattle_Y_G00990;transcript_id=Cattle_Y_T01695;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49561441	49561552	.	-	0	ID=Cattle_Y_C02978;Parent=Cattle_Y_T01695;Dbxref=GeneID:132344576,GenBank:XP_059740224.1;Name=XP_059740224.1;gbkey=CDS;gene=LOC132344576;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740224.1_1;gene_id=Cattle_Y_G00990;transcript_id=Cattle_Y_T01695;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49561736	49561813	.	-	0	ID=Cattle_Y_C02979;Parent=Cattle_Y_T01695;Dbxref=GeneID:132344576,GenBank:XP_059740224.1;Name=XP_059740224.1;gbkey=CDS;gene=LOC132344576;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740224.1_1;gene_id=Cattle_Y_G00990;transcript_id=Cattle_Y_T01695;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49562609	49563024	.	-	2	ID=Cattle_Y_C02980;Parent=Cattle_Y_T01695;Dbxref=GeneID:132344576,GenBank:XP_059740224.1;Name=XP_059740224.1;gbkey=CDS;gene=LOC132344576;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740224.1_1;gene_id=Cattle_Y_G00990;transcript_id=Cattle_Y_T01695;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49563121	49563136	.	-	0	ID=Cattle_Y_C02981;Parent=Cattle_Y_T01695;Dbxref=GeneID:132344576,GenBank:XP_059740224.1;Name=XP_059740224.1;gbkey=CDS;gene=LOC132344576;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740224.1_1;start_range=.,9236322;gene_id=Cattle_Y_G00990;transcript_id=Cattle_Y_T01695;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49568537	49570667	.	-	.	ID=Cattle_Y_G00991;Dbxref=GeneID:132344607;Name=LOC132344607;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344607;gene_biotype=protein_coding;partial=true;start_range=.,9740364;gene_id=Cattle_Y_G00991;source_id=gene-LOC132344607
haplotype2-0000357	CAT	mRNA	49568537	49570667	.	-	.	ID=Cattle_Y_T01696;Parent=Cattle_Y_G00991;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;Name=XM_059884273.1;gbkey=mRNA;gene=LOC132344607;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9740364;transcript_id=Cattle_Y_T01696;gene_id=Cattle_Y_G00991;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884273.1
haplotype2-0000357	CAT	exon	49568537	49568614	.	-	.	ID=Cattle_Y_E03386;Parent=Cattle_Y_T01696;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01696;gene_id=Cattle_Y_G00991;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-6
haplotype2-0000357	CAT	exon	49568731	49568876	.	-	.	ID=Cattle_Y_E03387;Parent=Cattle_Y_T01696;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01696;gene_id=Cattle_Y_G00991;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-5
haplotype2-0000357	CAT	exon	49568972	49569083	.	-	.	ID=Cattle_Y_E03388;Parent=Cattle_Y_T01696;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01696;gene_id=Cattle_Y_G00991;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-4
haplotype2-0000357	CAT	exon	49569267	49569344	.	-	.	ID=Cattle_Y_E03389;Parent=Cattle_Y_T01696;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01696;gene_id=Cattle_Y_G00991;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-3
haplotype2-0000357	CAT	exon	49570140	49570555	.	-	.	ID=Cattle_Y_E03390;Parent=Cattle_Y_T01696;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01696;gene_id=Cattle_Y_G00991;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-2
haplotype2-0000357	CAT	exon	49570652	49570667	.	-	.	ID=Cattle_Y_E03391;Parent=Cattle_Y_T01696;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9740364;transcript_id=Cattle_Y_T01696;gene_id=Cattle_Y_G00991;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-1
haplotype2-0000357	CAT	CDS	49568537	49568614	.	-	0	ID=Cattle_Y_C02982;Parent=Cattle_Y_T01696;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1_2;gene_id=Cattle_Y_G00991;transcript_id=Cattle_Y_T01696;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49568731	49568876	.	-	2	ID=Cattle_Y_C02983;Parent=Cattle_Y_T01696;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1_2;gene_id=Cattle_Y_G00991;transcript_id=Cattle_Y_T01696;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49568972	49569083	.	-	0	ID=Cattle_Y_C02984;Parent=Cattle_Y_T01696;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1_2;gene_id=Cattle_Y_G00991;transcript_id=Cattle_Y_T01696;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49569267	49569344	.	-	0	ID=Cattle_Y_C02985;Parent=Cattle_Y_T01696;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1_2;gene_id=Cattle_Y_G00991;transcript_id=Cattle_Y_T01696;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49570140	49570555	.	-	2	ID=Cattle_Y_C02986;Parent=Cattle_Y_T01696;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1_2;gene_id=Cattle_Y_G00991;transcript_id=Cattle_Y_T01696;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49570652	49570667	.	-	0	ID=Cattle_Y_C02987;Parent=Cattle_Y_T01696;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1_2;start_range=.,9740364;gene_id=Cattle_Y_G00991;transcript_id=Cattle_Y_T01696;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49576068	49578306	.	-	.	ID=Cattle_Y_G00992;Dbxref=GeneID:132344585;Name=LOC132344585;description=testis-specific Y-encoded protein 1;gbkey=Gene;gene=LOC132344585;gene_biotype=protein_coding;gene_id=Cattle_Y_G00992;source_id=gene-LOC132344585
haplotype2-0000357	CAT	mRNA	49576068	49578306	.	-	.	ID=Cattle_Y_T01697;Parent=Cattle_Y_G00992;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;Name=XM_059884251.1;gbkey=mRNA;gene=LOC132344585;model_evidence=Supporting evidence includes similarity to: 2 Proteins;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01697;gene_id=Cattle_Y_G00992;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884251.1
haplotype2-0000357	CAT	exon	49576068	49576145	.	-	.	ID=Cattle_Y_E03392;Parent=Cattle_Y_T01697;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01697;gene_id=Cattle_Y_G00992;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-6
haplotype2-0000357	CAT	exon	49576262	49576407	.	-	.	ID=Cattle_Y_E03393;Parent=Cattle_Y_T01697;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01697;gene_id=Cattle_Y_G00992;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-5
haplotype2-0000357	CAT	exon	49576503	49576614	.	-	.	ID=Cattle_Y_E03394;Parent=Cattle_Y_T01697;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01697;gene_id=Cattle_Y_G00992;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-4
haplotype2-0000357	CAT	exon	49576798	49576875	.	-	.	ID=Cattle_Y_E03395;Parent=Cattle_Y_T01697;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01697;gene_id=Cattle_Y_G00992;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-3
haplotype2-0000357	CAT	exon	49577671	49578086	.	-	.	ID=Cattle_Y_E03396;Parent=Cattle_Y_T01697;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01697;gene_id=Cattle_Y_G00992;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-2
haplotype2-0000357	CAT	exon	49578183	49578306	.	-	.	ID=Cattle_Y_E03397;Parent=Cattle_Y_T01697;Dbxref=GeneID:132344585,GenBank:XM_059884251.1;gbkey=mRNA;gene=LOC132344585;product=testis-specific Y-encoded protein 1;transcript_id=Cattle_Y_T01697;gene_id=Cattle_Y_G00992;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884251.1-1
haplotype2-0000357	CAT	CDS	49576068	49576145	.	-	0	ID=Cattle_Y_C02988;Parent=Cattle_Y_T01697;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_24;gene_id=Cattle_Y_G00992;transcript_id=Cattle_Y_T01697;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49576262	49576407	.	-	2	ID=Cattle_Y_C02989;Parent=Cattle_Y_T01697;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_24;gene_id=Cattle_Y_G00992;transcript_id=Cattle_Y_T01697;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49576503	49576614	.	-	0	ID=Cattle_Y_C02990;Parent=Cattle_Y_T01697;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_24;gene_id=Cattle_Y_G00992;transcript_id=Cattle_Y_T01697;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49576798	49576875	.	-	0	ID=Cattle_Y_C02991;Parent=Cattle_Y_T01697;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_24;gene_id=Cattle_Y_G00992;transcript_id=Cattle_Y_T01697;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49577671	49578086	.	-	2	ID=Cattle_Y_C02992;Parent=Cattle_Y_T01697;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_24;gene_id=Cattle_Y_G00992;transcript_id=Cattle_Y_T01697;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49578183	49578306	.	-	0	ID=Cattle_Y_C02993;Parent=Cattle_Y_T01697;Dbxref=GeneID:132344585,GenBank:XP_059740234.1;Name=XP_059740234.1;gbkey=CDS;gene=LOC132344585;product=testis-specific Y-encoded protein 1;protein_id=XP_059740234.1_24;gene_id=Cattle_Y_G00992;transcript_id=Cattle_Y_T01697;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49583599	49585729	.	-	.	ID=Cattle_Y_G00993;Dbxref=GeneID:132344607;Name=LOC132344607;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344607;gene_biotype=protein_coding;partial=true;start_range=.,9740364;gene_id=Cattle_Y_G00993;source_id=gene-LOC132344607
haplotype2-0000357	CAT	mRNA	49583599	49585729	.	-	.	ID=Cattle_Y_T01698;Parent=Cattle_Y_G00993;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;Name=XM_059884273.1;gbkey=mRNA;gene=LOC132344607;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9740364;transcript_id=Cattle_Y_T01698;gene_id=Cattle_Y_G00993;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884273.1
haplotype2-0000357	CAT	exon	49583599	49583676	.	-	.	ID=Cattle_Y_E03398;Parent=Cattle_Y_T01698;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01698;gene_id=Cattle_Y_G00993;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-6
haplotype2-0000357	CAT	exon	49583793	49583938	.	-	.	ID=Cattle_Y_E03399;Parent=Cattle_Y_T01698;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01698;gene_id=Cattle_Y_G00993;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-5
haplotype2-0000357	CAT	exon	49584034	49584145	.	-	.	ID=Cattle_Y_E03400;Parent=Cattle_Y_T01698;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01698;gene_id=Cattle_Y_G00993;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-4
haplotype2-0000357	CAT	exon	49584329	49584406	.	-	.	ID=Cattle_Y_E03401;Parent=Cattle_Y_T01698;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01698;gene_id=Cattle_Y_G00993;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-3
haplotype2-0000357	CAT	exon	49585202	49585617	.	-	.	ID=Cattle_Y_E03402;Parent=Cattle_Y_T01698;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01698;gene_id=Cattle_Y_G00993;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-2
haplotype2-0000357	CAT	exon	49585714	49585729	.	-	.	ID=Cattle_Y_E03403;Parent=Cattle_Y_T01698;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9740364;transcript_id=Cattle_Y_T01698;gene_id=Cattle_Y_G00993;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-1
haplotype2-0000357	CAT	CDS	49583599	49583676	.	-	0	ID=Cattle_Y_C02994;Parent=Cattle_Y_T01698;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1_4;gene_id=Cattle_Y_G00993;transcript_id=Cattle_Y_T01698;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49583793	49583938	.	-	2	ID=Cattle_Y_C02995;Parent=Cattle_Y_T01698;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1_4;gene_id=Cattle_Y_G00993;transcript_id=Cattle_Y_T01698;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49584034	49584145	.	-	0	ID=Cattle_Y_C02996;Parent=Cattle_Y_T01698;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1_4;gene_id=Cattle_Y_G00993;transcript_id=Cattle_Y_T01698;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49584329	49584406	.	-	0	ID=Cattle_Y_C02997;Parent=Cattle_Y_T01698;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1_4;gene_id=Cattle_Y_G00993;transcript_id=Cattle_Y_T01698;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49585202	49585617	.	-	2	ID=Cattle_Y_C02998;Parent=Cattle_Y_T01698;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1_4;gene_id=Cattle_Y_G00993;transcript_id=Cattle_Y_T01698;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49585714	49585729	.	-	0	ID=Cattle_Y_C02999;Parent=Cattle_Y_T01698;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1_4;start_range=.,9740364;gene_id=Cattle_Y_G00993;transcript_id=Cattle_Y_T01698;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49591131	49593261	.	-	.	ID=Cattle_Y_G00994;Dbxref=GeneID:132344607;Name=LOC132344607;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344607;gene_biotype=protein_coding;partial=true;start_range=.,9740364;gene_id=Cattle_Y_G00994;source_id=gene-LOC132344607
haplotype2-0000357	CAT	mRNA	49591131	49593261	.	-	.	ID=Cattle_Y_T01699;Parent=Cattle_Y_G00994;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;Name=XM_059884273.1;gbkey=mRNA;gene=LOC132344607;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9740364;transcript_id=Cattle_Y_T01699;gene_id=Cattle_Y_G00994;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884273.1
haplotype2-0000357	CAT	exon	49591131	49591208	.	-	.	ID=Cattle_Y_E03404;Parent=Cattle_Y_T01699;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01699;gene_id=Cattle_Y_G00994;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-6
haplotype2-0000357	CAT	exon	49591325	49591470	.	-	.	ID=Cattle_Y_E03405;Parent=Cattle_Y_T01699;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01699;gene_id=Cattle_Y_G00994;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-5
haplotype2-0000357	CAT	exon	49591566	49591677	.	-	.	ID=Cattle_Y_E03406;Parent=Cattle_Y_T01699;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01699;gene_id=Cattle_Y_G00994;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-4
haplotype2-0000357	CAT	exon	49591861	49591938	.	-	.	ID=Cattle_Y_E03407;Parent=Cattle_Y_T01699;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01699;gene_id=Cattle_Y_G00994;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-3
haplotype2-0000357	CAT	exon	49592734	49593149	.	-	.	ID=Cattle_Y_E03408;Parent=Cattle_Y_T01699;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01699;gene_id=Cattle_Y_G00994;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-2
haplotype2-0000357	CAT	exon	49593246	49593261	.	-	.	ID=Cattle_Y_E03409;Parent=Cattle_Y_T01699;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9740364;transcript_id=Cattle_Y_T01699;gene_id=Cattle_Y_G00994;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-1
haplotype2-0000357	CAT	CDS	49591131	49591208	.	-	0	ID=Cattle_Y_C03000;Parent=Cattle_Y_T01699;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1_3;gene_id=Cattle_Y_G00994;transcript_id=Cattle_Y_T01699;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49591325	49591470	.	-	2	ID=Cattle_Y_C03001;Parent=Cattle_Y_T01699;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1_3;gene_id=Cattle_Y_G00994;transcript_id=Cattle_Y_T01699;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49591566	49591677	.	-	0	ID=Cattle_Y_C03002;Parent=Cattle_Y_T01699;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1_3;gene_id=Cattle_Y_G00994;transcript_id=Cattle_Y_T01699;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49591861	49591938	.	-	0	ID=Cattle_Y_C03003;Parent=Cattle_Y_T01699;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1_3;gene_id=Cattle_Y_G00994;transcript_id=Cattle_Y_T01699;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49592734	49593149	.	-	2	ID=Cattle_Y_C03004;Parent=Cattle_Y_T01699;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1_3;gene_id=Cattle_Y_G00994;transcript_id=Cattle_Y_T01699;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49593246	49593261	.	-	0	ID=Cattle_Y_C03005;Parent=Cattle_Y_T01699;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1_3;start_range=.,9740364;gene_id=Cattle_Y_G00994;transcript_id=Cattle_Y_T01699;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49598663	49600793	.	-	.	ID=Cattle_Y_G00995;Dbxref=GeneID:132344607;Name=LOC132344607;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344607;gene_biotype=protein_coding;partial=true;start_range=.,9740364;gene_id=Cattle_Y_G00995;source_id=gene-LOC132344607
haplotype2-0000357	CAT	mRNA	49598663	49600793	.	-	.	ID=Cattle_Y_T01700;Parent=Cattle_Y_G00995;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;Name=XM_059884273.1;gbkey=mRNA;gene=LOC132344607;model_evidence=Supporting evidence includes similarity to: 2 Proteins;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9740364;transcript_id=Cattle_Y_T01700;gene_id=Cattle_Y_G00995;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884273.1
haplotype2-0000357	CAT	exon	49598663	49598740	.	-	.	ID=Cattle_Y_E03410;Parent=Cattle_Y_T01700;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01700;gene_id=Cattle_Y_G00995;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-6
haplotype2-0000357	CAT	exon	49598857	49599002	.	-	.	ID=Cattle_Y_E03411;Parent=Cattle_Y_T01700;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01700;gene_id=Cattle_Y_G00995;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-5
haplotype2-0000357	CAT	exon	49599098	49599209	.	-	.	ID=Cattle_Y_E03412;Parent=Cattle_Y_T01700;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01700;gene_id=Cattle_Y_G00995;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-4
haplotype2-0000357	CAT	exon	49599393	49599470	.	-	.	ID=Cattle_Y_E03413;Parent=Cattle_Y_T01700;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01700;gene_id=Cattle_Y_G00995;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-3
haplotype2-0000357	CAT	exon	49600266	49600681	.	-	.	ID=Cattle_Y_E03414;Parent=Cattle_Y_T01700;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01700;gene_id=Cattle_Y_G00995;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-2
haplotype2-0000357	CAT	exon	49600778	49600793	.	-	.	ID=Cattle_Y_E03415;Parent=Cattle_Y_T01700;Dbxref=GeneID:132344607,GenBank:XM_059884273.1;gbkey=mRNA;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9740364;transcript_id=Cattle_Y_T01700;gene_id=Cattle_Y_G00995;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884273.1-1
haplotype2-0000357	CAT	CDS	49598663	49598740	.	-	0	ID=Cattle_Y_C03006;Parent=Cattle_Y_T01700;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1_1;gene_id=Cattle_Y_G00995;transcript_id=Cattle_Y_T01700;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49598857	49599002	.	-	2	ID=Cattle_Y_C03007;Parent=Cattle_Y_T01700;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1_1;gene_id=Cattle_Y_G00995;transcript_id=Cattle_Y_T01700;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49599098	49599209	.	-	0	ID=Cattle_Y_C03008;Parent=Cattle_Y_T01700;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1_1;gene_id=Cattle_Y_G00995;transcript_id=Cattle_Y_T01700;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49599393	49599470	.	-	0	ID=Cattle_Y_C03009;Parent=Cattle_Y_T01700;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1_1;gene_id=Cattle_Y_G00995;transcript_id=Cattle_Y_T01700;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49600266	49600681	.	-	2	ID=Cattle_Y_C03010;Parent=Cattle_Y_T01700;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1_1;gene_id=Cattle_Y_G00995;transcript_id=Cattle_Y_T01700;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49600778	49600793	.	-	0	ID=Cattle_Y_C03011;Parent=Cattle_Y_T01700;Dbxref=GeneID:132344607,GenBank:XP_059740256.1;Name=XP_059740256.1;gbkey=CDS;gene=LOC132344607;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740256.1_1;start_range=.,9740364;gene_id=Cattle_Y_G00995;transcript_id=Cattle_Y_T01700;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49606193	49608315	.	-	.	ID=Cattle_Y_G00996;Dbxref=GeneID:132344575;Name=LOC132344575;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344575;gene_biotype=protein_coding;partial=true;start_range=.,9228925;gene_id=Cattle_Y_G00996;source_id=gene-LOC132344575
haplotype2-0000357	CAT	mRNA	49606193	49608315	.	-	.	ID=Cattle_Y_T01701;Parent=Cattle_Y_G00996;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;Name=XM_059884240.1;gbkey=mRNA;gene=LOC132344575;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01701;gene_id=Cattle_Y_G00996;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884240.1
haplotype2-0000357	CAT	exon	49606193	49606270	.	-	.	ID=Cattle_Y_E03416;Parent=Cattle_Y_T01701;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01701;gene_id=Cattle_Y_G00996;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-6
haplotype2-0000357	CAT	exon	49606387	49606532	.	-	.	ID=Cattle_Y_E03417;Parent=Cattle_Y_T01701;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01701;gene_id=Cattle_Y_G00996;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-5
haplotype2-0000357	CAT	exon	49606628	49606739	.	-	.	ID=Cattle_Y_E03418;Parent=Cattle_Y_T01701;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01701;gene_id=Cattle_Y_G00996;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-4
haplotype2-0000357	CAT	exon	49606923	49607000	.	-	.	ID=Cattle_Y_E03419;Parent=Cattle_Y_T01701;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01701;gene_id=Cattle_Y_G00996;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-3
haplotype2-0000357	CAT	exon	49607788	49608203	.	-	.	ID=Cattle_Y_E03420;Parent=Cattle_Y_T01701;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01701;gene_id=Cattle_Y_G00996;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-2
haplotype2-0000357	CAT	exon	49608300	49608315	.	-	.	ID=Cattle_Y_E03421;Parent=Cattle_Y_T01701;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01701;gene_id=Cattle_Y_G00996;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-1
haplotype2-0000357	CAT	CDS	49606193	49606270	.	-	0	ID=Cattle_Y_C03012;Parent=Cattle_Y_T01701;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_11;gene_id=Cattle_Y_G00996;transcript_id=Cattle_Y_T01701;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49606387	49606532	.	-	2	ID=Cattle_Y_C03013;Parent=Cattle_Y_T01701;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_11;gene_id=Cattle_Y_G00996;transcript_id=Cattle_Y_T01701;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49606628	49606739	.	-	0	ID=Cattle_Y_C03014;Parent=Cattle_Y_T01701;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_11;gene_id=Cattle_Y_G00996;transcript_id=Cattle_Y_T01701;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49606923	49607000	.	-	0	ID=Cattle_Y_C03015;Parent=Cattle_Y_T01701;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_11;gene_id=Cattle_Y_G00996;transcript_id=Cattle_Y_T01701;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49607788	49608203	.	-	2	ID=Cattle_Y_C03016;Parent=Cattle_Y_T01701;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_11;gene_id=Cattle_Y_G00996;transcript_id=Cattle_Y_T01701;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49608300	49608315	.	-	0	ID=Cattle_Y_C03017;Parent=Cattle_Y_T01701;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_11;start_range=.,9228925;gene_id=Cattle_Y_G00996;transcript_id=Cattle_Y_T01701;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49628491	49630723	1651	-	.	ID=Cattle_Y_G00997;Dbxref=BGD:BT19054,GeneID:281554;Name=TSPY;description=testis specific protein%2C Y-linked 1;gbkey=Gene;gene=TSPY;gene_biotype=protein_coding;gene_synonym=TSPY-M1,TSPY1;gene_id=Cattle_Y_G00997;source_id=gene-TSPY
haplotype2-0000357	CAT	mRNA	49628491	49630723	1651	-	.	ID=Cattle_Y_T01702;Parent=Cattle_Y_G00997;Dbxref=GeneID:281554,GenBank:NM_001244608.1,BGD:BT19054;Name=NM_001244608.1;Note=The RefSeq transcript has 5 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TSPY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001244608.1;product=testis specific protein%2C Y-linked 1;transcript_id=Cattle_Y_T01702;gene_id=Cattle_Y_G00997;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001244608.1
haplotype2-0000357	CAT	exon	49628491	49628568	135	-	0	ID=Cattle_Y_E03422;Parent=Cattle_Y_T01702;gene_id=Cattle_Y_G00997;transcript_id=Cattle_Y_T01702;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49628685	49628830	270	-	2	ID=Cattle_Y_E03423;Parent=Cattle_Y_T01702;gene_id=Cattle_Y_G00997;transcript_id=Cattle_Y_T01702;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49628926	49629037	203	-	0	ID=Cattle_Y_E03424;Parent=Cattle_Y_T01702;gene_id=Cattle_Y_G00997;transcript_id=Cattle_Y_T01702;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49629221	49629298	133	-	0	ID=Cattle_Y_E03425;Parent=Cattle_Y_T01702;gene_id=Cattle_Y_G00997;transcript_id=Cattle_Y_T01702;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49630088	49630503	692	-	2	ID=Cattle_Y_E03426;Parent=Cattle_Y_T01702;gene_id=Cattle_Y_G00997;transcript_id=Cattle_Y_T01702;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	exon	49630600	49630723	218	-	0	ID=Cattle_Y_E03427;Parent=Cattle_Y_T01702;gene_id=Cattle_Y_G00997;transcript_id=Cattle_Y_T01702;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49628491	49628568	135	-	0	ID=Cattle_Y_C03018;Parent=Cattle_Y_T01702;gene_id=Cattle_Y_G00997;transcript_id=Cattle_Y_T01702;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49628685	49628830	270	-	2	ID=Cattle_Y_C03019;Parent=Cattle_Y_T01702;gene_id=Cattle_Y_G00997;transcript_id=Cattle_Y_T01702;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49628926	49629037	203	-	0	ID=Cattle_Y_C03020;Parent=Cattle_Y_T01702;gene_id=Cattle_Y_G00997;transcript_id=Cattle_Y_T01702;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49629221	49629298	133	-	0	ID=Cattle_Y_C03021;Parent=Cattle_Y_T01702;gene_id=Cattle_Y_G00997;transcript_id=Cattle_Y_T01702;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49630088	49630503	692	-	2	ID=Cattle_Y_C03022;Parent=Cattle_Y_T01702;gene_id=Cattle_Y_G00997;transcript_id=Cattle_Y_T01702;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49630600	49630723	218	-	0	ID=Cattle_Y_C03023;Parent=Cattle_Y_T01702;gene_id=Cattle_Y_G00997;transcript_id=Cattle_Y_T01702;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49636016	49638254	.	-	.	ID=Cattle_Y_G00998;Dbxref=GeneID:132344572;Name=LOC132344572;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344572;gene_biotype=protein_coding;gene_id=Cattle_Y_G00998;source_id=gene-LOC132344572
haplotype2-0000357	CAT	mRNA	49636016	49638254	.	-	.	ID=Cattle_Y_T01703;Parent=Cattle_Y_G00998;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;Name=XM_059884237.1;gbkey=mRNA;gene=LOC132344572;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 7%25 coverage of the annotated genomic feature by RNAseq alignments;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01703;gene_id=Cattle_Y_G00998;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884237.1
haplotype2-0000357	CAT	exon	49636016	49636093	.	-	.	ID=Cattle_Y_E03428;Parent=Cattle_Y_T01703;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01703;gene_id=Cattle_Y_G00998;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-6
haplotype2-0000357	CAT	exon	49636210	49636355	.	-	.	ID=Cattle_Y_E03429;Parent=Cattle_Y_T01703;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01703;gene_id=Cattle_Y_G00998;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-5
haplotype2-0000357	CAT	exon	49636451	49636562	.	-	.	ID=Cattle_Y_E03430;Parent=Cattle_Y_T01703;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01703;gene_id=Cattle_Y_G00998;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-4
haplotype2-0000357	CAT	exon	49636746	49636823	.	-	.	ID=Cattle_Y_E03431;Parent=Cattle_Y_T01703;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01703;gene_id=Cattle_Y_G00998;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-3
haplotype2-0000357	CAT	exon	49637619	49638034	.	-	.	ID=Cattle_Y_E03432;Parent=Cattle_Y_T01703;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01703;gene_id=Cattle_Y_G00998;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-2
haplotype2-0000357	CAT	exon	49638131	49638254	.	-	.	ID=Cattle_Y_E03433;Parent=Cattle_Y_T01703;Dbxref=GeneID:132344572,GenBank:XM_059884237.1;gbkey=mRNA;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01703;gene_id=Cattle_Y_G00998;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884237.1-1
haplotype2-0000357	CAT	CDS	49636016	49636093	.	-	0	ID=Cattle_Y_C03024;Parent=Cattle_Y_T01703;Dbxref=GeneID:132344572,GenBank:XP_059740220.1;Name=XP_059740220.1;gbkey=CDS;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740220.1_4;gene_id=Cattle_Y_G00998;transcript_id=Cattle_Y_T01703;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49636210	49636355	.	-	2	ID=Cattle_Y_C03025;Parent=Cattle_Y_T01703;Dbxref=GeneID:132344572,GenBank:XP_059740220.1;Name=XP_059740220.1;gbkey=CDS;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740220.1_4;gene_id=Cattle_Y_G00998;transcript_id=Cattle_Y_T01703;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49636451	49636562	.	-	0	ID=Cattle_Y_C03026;Parent=Cattle_Y_T01703;Dbxref=GeneID:132344572,GenBank:XP_059740220.1;Name=XP_059740220.1;gbkey=CDS;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740220.1_4;gene_id=Cattle_Y_G00998;transcript_id=Cattle_Y_T01703;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49636746	49636823	.	-	0	ID=Cattle_Y_C03027;Parent=Cattle_Y_T01703;Dbxref=GeneID:132344572,GenBank:XP_059740220.1;Name=XP_059740220.1;gbkey=CDS;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740220.1_4;gene_id=Cattle_Y_G00998;transcript_id=Cattle_Y_T01703;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49637619	49638034	.	-	2	ID=Cattle_Y_C03028;Parent=Cattle_Y_T01703;Dbxref=GeneID:132344572,GenBank:XP_059740220.1;Name=XP_059740220.1;gbkey=CDS;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740220.1_4;gene_id=Cattle_Y_G00998;transcript_id=Cattle_Y_T01703;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49638131	49638254	.	-	0	ID=Cattle_Y_C03029;Parent=Cattle_Y_T01703;Dbxref=GeneID:132344572,GenBank:XP_059740220.1;Name=XP_059740220.1;gbkey=CDS;gene=LOC132344572;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740220.1_4;gene_id=Cattle_Y_G00998;transcript_id=Cattle_Y_T01703;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49643546	49645668	.	-	.	ID=Cattle_Y_G00999;Dbxref=GeneID:132344575;Name=LOC132344575;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344575;gene_biotype=protein_coding;partial=true;start_range=.,9228925;gene_id=Cattle_Y_G00999;source_id=gene-LOC132344575
haplotype2-0000357	CAT	mRNA	49643546	49645668	.	-	.	ID=Cattle_Y_T01704;Parent=Cattle_Y_G00999;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;Name=XM_059884240.1;gbkey=mRNA;gene=LOC132344575;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01704;gene_id=Cattle_Y_G00999;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884240.1
haplotype2-0000357	CAT	exon	49643546	49643623	.	-	.	ID=Cattle_Y_E03434;Parent=Cattle_Y_T01704;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01704;gene_id=Cattle_Y_G00999;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-6
haplotype2-0000357	CAT	exon	49643740	49643885	.	-	.	ID=Cattle_Y_E03435;Parent=Cattle_Y_T01704;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01704;gene_id=Cattle_Y_G00999;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-5
haplotype2-0000357	CAT	exon	49643981	49644092	.	-	.	ID=Cattle_Y_E03436;Parent=Cattle_Y_T01704;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01704;gene_id=Cattle_Y_G00999;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-4
haplotype2-0000357	CAT	exon	49644276	49644353	.	-	.	ID=Cattle_Y_E03437;Parent=Cattle_Y_T01704;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01704;gene_id=Cattle_Y_G00999;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-3
haplotype2-0000357	CAT	exon	49645141	49645556	.	-	.	ID=Cattle_Y_E03438;Parent=Cattle_Y_T01704;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01704;gene_id=Cattle_Y_G00999;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-2
haplotype2-0000357	CAT	exon	49645653	49645668	.	-	.	ID=Cattle_Y_E03439;Parent=Cattle_Y_T01704;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01704;gene_id=Cattle_Y_G00999;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-1
haplotype2-0000357	CAT	CDS	49643546	49643623	.	-	0	ID=Cattle_Y_C03030;Parent=Cattle_Y_T01704;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_8;gene_id=Cattle_Y_G00999;transcript_id=Cattle_Y_T01704;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49643740	49643885	.	-	2	ID=Cattle_Y_C03031;Parent=Cattle_Y_T01704;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_8;gene_id=Cattle_Y_G00999;transcript_id=Cattle_Y_T01704;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49643981	49644092	.	-	0	ID=Cattle_Y_C03032;Parent=Cattle_Y_T01704;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_8;gene_id=Cattle_Y_G00999;transcript_id=Cattle_Y_T01704;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49644276	49644353	.	-	0	ID=Cattle_Y_C03033;Parent=Cattle_Y_T01704;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_8;gene_id=Cattle_Y_G00999;transcript_id=Cattle_Y_T01704;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49645141	49645556	.	-	2	ID=Cattle_Y_C03034;Parent=Cattle_Y_T01704;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_8;gene_id=Cattle_Y_G00999;transcript_id=Cattle_Y_T01704;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49645653	49645668	.	-	0	ID=Cattle_Y_C03035;Parent=Cattle_Y_T01704;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_8;start_range=.,9228925;gene_id=Cattle_Y_G00999;transcript_id=Cattle_Y_T01704;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49651070	49653192	.	-	.	ID=Cattle_Y_G01000;Dbxref=GeneID:132344575;Name=LOC132344575;description=testis-specific Y-encoded protein 1-like;gbkey=Gene;gene=LOC132344575;gene_biotype=protein_coding;partial=true;start_range=.,9228925;gene_id=Cattle_Y_G01000;source_id=gene-LOC132344575
haplotype2-0000357	CAT	mRNA	49651070	49653192	.	-	.	ID=Cattle_Y_T01705;Parent=Cattle_Y_G01000;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;Name=XM_059884240.1;gbkey=mRNA;gene=LOC132344575;model_evidence=Supporting evidence includes similarity to: 1 Protein;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01705;gene_id=Cattle_Y_G01000;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884240.1
haplotype2-0000357	CAT	exon	49651070	49651147	.	-	.	ID=Cattle_Y_E03440;Parent=Cattle_Y_T01705;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01705;gene_id=Cattle_Y_G01000;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-6
haplotype2-0000357	CAT	exon	49651264	49651409	.	-	.	ID=Cattle_Y_E03441;Parent=Cattle_Y_T01705;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01705;gene_id=Cattle_Y_G01000;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-5
haplotype2-0000357	CAT	exon	49651505	49651616	.	-	.	ID=Cattle_Y_E03442;Parent=Cattle_Y_T01705;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01705;gene_id=Cattle_Y_G01000;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-4
haplotype2-0000357	CAT	exon	49651800	49651877	.	-	.	ID=Cattle_Y_E03443;Parent=Cattle_Y_T01705;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01705;gene_id=Cattle_Y_G01000;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-3
haplotype2-0000357	CAT	exon	49652665	49653080	.	-	.	ID=Cattle_Y_E03444;Parent=Cattle_Y_T01705;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;transcript_id=Cattle_Y_T01705;gene_id=Cattle_Y_G01000;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-2
haplotype2-0000357	CAT	exon	49653177	49653192	.	-	.	ID=Cattle_Y_E03445;Parent=Cattle_Y_T01705;Dbxref=GeneID:132344575,GenBank:XM_059884240.1;gbkey=mRNA;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;start_range=.,9228925;transcript_id=Cattle_Y_T01705;gene_id=Cattle_Y_G01000;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884240.1-1
haplotype2-0000357	CAT	CDS	49651070	49651147	.	-	0	ID=Cattle_Y_C03036;Parent=Cattle_Y_T01705;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_12;gene_id=Cattle_Y_G01000;transcript_id=Cattle_Y_T01705;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49651264	49651409	.	-	2	ID=Cattle_Y_C03037;Parent=Cattle_Y_T01705;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_12;gene_id=Cattle_Y_G01000;transcript_id=Cattle_Y_T01705;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49651505	49651616	.	-	0	ID=Cattle_Y_C03038;Parent=Cattle_Y_T01705;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_12;gene_id=Cattle_Y_G01000;transcript_id=Cattle_Y_T01705;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49651800	49651877	.	-	0	ID=Cattle_Y_C03039;Parent=Cattle_Y_T01705;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_12;gene_id=Cattle_Y_G01000;transcript_id=Cattle_Y_T01705;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49652665	49653080	.	-	2	ID=Cattle_Y_C03040;Parent=Cattle_Y_T01705;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_12;gene_id=Cattle_Y_G01000;transcript_id=Cattle_Y_T01705;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49653177	49653192	.	-	0	ID=Cattle_Y_C03041;Parent=Cattle_Y_T01705;Dbxref=GeneID:132344575,GenBank:XP_059740223.1;Name=XP_059740223.1;gbkey=CDS;gene=LOC132344575;partial=true;product=testis-specific Y-encoded protein 1-like;protein_id=XP_059740223.1_12;start_range=.,9228925;gene_id=Cattle_Y_G01000;transcript_id=Cattle_Y_T01705;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49718981	49720574	.	+	.	ID=Cattle_Y_G01001;Dbxref=GeneID:132344571;Name=LOC132344571;description=zinc finger protein 280A-like;gbkey=Gene;gene=LOC132344571;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G01001;source_id=gene-LOC132344571
haplotype2-0000357	CAT	exon	49718981	49720574	.	+	.	ID=Cattle_Y_T01706;Parent=Cattle_Y_G01001;Dbxref=GeneID:132344571;gbkey=exon;gene=LOC132344571;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G01001;transcript_id=Cattle_Y_T01706;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344571
haplotype2-0000357	CAT	gene	49737569	49743564	.	+	.	ID=Cattle_Y_G01002;Dbxref=GeneID:132344426;Name=LOC132344426;description=zinc finger protein 280B-like;gbkey=Gene;gene=LOC132344426;gene_biotype=protein_coding;gene_id=Cattle_Y_G01002;source_id=gene-LOC132344426
haplotype2-0000357	CAT	mRNA	49737569	49743564	.	+	.	ID=Cattle_Y_T01707;Parent=Cattle_Y_G01002;Dbxref=GeneID:132344426,GenBank:XM_059884006.1;Name=XM_059884006.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;exception=unclassified transcription discrepancy;gbkey=mRNA;gene=LOC132344426;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 32%25 coverage of the annotated genomic feature by RNAseq alignments;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T01707;gene_id=Cattle_Y_G01002;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884006.1
haplotype2-0000357	CAT	exon	49737569	49737587	.	+	.	ID=Cattle_Y_E03446;Parent=Cattle_Y_T01707;Dbxref=GeneID:132344426,GenBank:XM_059884006.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;exception=unclassified transcription discrepancy;gbkey=mRNA;gene=LOC132344426;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T01707;gene_id=Cattle_Y_G01002;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884006.1-1
haplotype2-0000357	CAT	exon	49737836	49739050	.	+	.	ID=Cattle_Y_E03447;Parent=Cattle_Y_T01707;Dbxref=GeneID:132344426,GenBank:XM_059884006.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;exception=unclassified transcription discrepancy;gbkey=mRNA;gene=LOC132344426;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T01707;gene_id=Cattle_Y_G01002;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884006.1-2
haplotype2-0000357	CAT	exon	49739053	49739313	.	+	.	ID=Cattle_Y_E03448;Parent=Cattle_Y_T01707;Dbxref=GeneID:132344426,GenBank:XM_059884006.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;exception=unclassified transcription discrepancy;gbkey=mRNA;gene=LOC132344426;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T01707;gene_id=Cattle_Y_G01002;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884006.1-3
haplotype2-0000357	CAT	exon	49743527	49743564	.	+	.	ID=Cattle_Y_E03449;Parent=Cattle_Y_T01707;Dbxref=GeneID:132344426,GenBank:XM_059884006.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;exception=unclassified transcription discrepancy;gbkey=mRNA;gene=LOC132344426;product=zinc finger protein 280B-like;transcript_id=Cattle_Y_T01707;gene_id=Cattle_Y_G01002;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884006.1-4
haplotype2-0000357	CAT	CDS	49737569	49737587	.	+	0	ID=Cattle_Y_C03042;Parent=Cattle_Y_T01707;Dbxref=GeneID:132344426,GenBank:XP_059739989.1;Name=XP_059739989.1;Note=The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;exception=unclassified translation discrepancy;gbkey=CDS;gene=LOC132344426;product=LOW QUALITY PROTEIN: zinc finger protein 280B-like;protein_id=XP_059739989.1_1;gene_id=Cattle_Y_G01002;transcript_id=Cattle_Y_T01707;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49737836	49739050	.	+	2	ID=Cattle_Y_C03043;Parent=Cattle_Y_T01707;Dbxref=GeneID:132344426,GenBank:XP_059739989.1;Name=XP_059739989.1;Note=The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;exception=unclassified translation discrepancy;gbkey=CDS;gene=LOC132344426;product=LOW QUALITY PROTEIN: zinc finger protein 280B-like;protein_id=XP_059739989.1_1;gene_id=Cattle_Y_G01002;transcript_id=Cattle_Y_T01707;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49739053	49739313	.	+	2	ID=Cattle_Y_C03044;Parent=Cattle_Y_T01707;Dbxref=GeneID:132344426,GenBank:XP_059739989.1;Name=XP_059739989.1;Note=The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;exception=unclassified translation discrepancy;gbkey=CDS;gene=LOC132344426;product=LOW QUALITY PROTEIN: zinc finger protein 280B-like;protein_id=XP_059739989.1_1;gene_id=Cattle_Y_G01002;transcript_id=Cattle_Y_T01707;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49743527	49743564	.	+	2	ID=Cattle_Y_C03045;Parent=Cattle_Y_T01707;Dbxref=GeneID:132344426,GenBank:XP_059739989.1;Name=XP_059739989.1;Note=The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;exception=unclassified translation discrepancy;gbkey=CDS;gene=LOC132344426;product=LOW QUALITY PROTEIN: zinc finger protein 280B-like;protein_id=XP_059739989.1_1;gene_id=Cattle_Y_G01002;transcript_id=Cattle_Y_T01707;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49773822	49774320	.	-	.	ID=Cattle_Y_G01003;Dbxref=GeneID:132344556;Name=LOC132344556;description=heat shock transcription factor%2C Y-linked-like;gbkey=Gene;gene=LOC132344556;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G01003;source_id=gene-LOC132344556
haplotype2-0000357	CAT	exon	49773822	49774320	.	-	.	ID=Cattle_Y_T01708;Parent=Cattle_Y_G01003;Dbxref=GeneID:132344556;gbkey=exon;gene=LOC132344556;model_evidence=Supporting evidence includes similarity to: 1 Protein;pseudo=true;gene_id=Cattle_Y_G01003;transcript_id=Cattle_Y_T01708;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344556
haplotype2-0000357	CAT	gene	49833653	49870250	.	+	.	ID=Cattle_Y_G01004;Dbxref=GeneID:132344570;Name=LOC132344570;description=uncharacterized LOC132344570;gbkey=Gene;gene=LOC132344570;gene_biotype=lncRNA;gene_id=Cattle_Y_G01004;source_id=gene-LOC132344570
haplotype2-0000357	CAT	lnc_RNA	49833653	49870250	.	+	.	ID=Cattle_Y_T01709;Parent=Cattle_Y_G01004;Dbxref=GeneID:132344570,GenBank:XR_009493658.1;Name=XR_009493658.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=ncRNA;gene=LOC132344570;model_evidence=Supporting evidence includes similarity to: 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01709;gene_id=Cattle_Y_G01004;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=rna-XR_009493658.1
haplotype2-0000357	CAT	exon	49833653	49833816	.	+	.	ID=Cattle_Y_E03450;Parent=Cattle_Y_T01709;Dbxref=GeneID:132344570,GenBank:XR_009493658.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=ncRNA;gene=LOC132344570;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01709;gene_id=Cattle_Y_G01004;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493658.1-1
haplotype2-0000357	CAT	exon	49853792	49853887	.	+	.	ID=Cattle_Y_E03451;Parent=Cattle_Y_T01709;Dbxref=GeneID:132344570,GenBank:XR_009493658.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=ncRNA;gene=LOC132344570;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01709;gene_id=Cattle_Y_G01004;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493658.1-2
haplotype2-0000357	CAT	exon	49870007	49870250	.	+	.	ID=Cattle_Y_E03452;Parent=Cattle_Y_T01709;Dbxref=GeneID:132344570,GenBank:XR_009493658.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=ncRNA;gene=LOC132344570;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01709;gene_id=Cattle_Y_G01004;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493658.1-3
haplotype2-0000357	CAT	gene	49851049	49852945	.	-	.	ID=Cattle_Y_G01005;Dbxref=GeneID:100126816;Name=LOC100126816;description=heat shock transcription factor%2C Y linked 2-like;gbkey=Gene;gene=LOC100126816;gene_biotype=protein_coding;gene_id=Cattle_Y_G01005;source_id=gene-LOC100126816
haplotype2-0000357	CAT	mRNA	49851049	49852945	.	-	.	ID=Cattle_Y_T01710;Parent=Cattle_Y_G01005;Dbxref=GeneID:100126816,GenBank:NM_001111070.1;Name=NM_001111070.1;Note=The RefSeq transcript has 2 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC100126816;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001111070.1;product=heat shock transcription factor%2C Y linked 2-like;transcript_id=Cattle_Y_T01710;gene_id=Cattle_Y_G01005;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001111070.1
haplotype2-0000357	CAT	exon	49851049	49851471	.	-	.	ID=Cattle_Y_E03453;Parent=Cattle_Y_T01710;Dbxref=GeneID:100126816,GenBank:NM_001111070.1;Note=The RefSeq transcript has 2 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC100126816;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001111070.1;product=heat shock transcription factor, Y linked 2-like;transcript_id=Cattle_Y_T01710;gene_id=Cattle_Y_G01005;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001111070.1-2
haplotype2-0000357	CAT	exon	49852308	49852945	.	-	.	ID=Cattle_Y_E03454;Parent=Cattle_Y_T01710;Dbxref=GeneID:100126816,GenBank:NM_001111070.1;Note=The RefSeq transcript has 2 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=LOC100126816;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001111070.1;product=heat shock transcription factor, Y linked 2-like;transcript_id=Cattle_Y_T01710;gene_id=Cattle_Y_G01005;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001111070.1-1
haplotype2-0000357	CAT	CDS	49852482	49852814	.	-	0	ID=Cattle_Y_C03046;Parent=Cattle_Y_T01710;Dbxref=GeneID:100126816,GenBank:NP_001104540.1;Name=NP_001104540.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=LOC100126816;inference=similar to AA sequence (same species):RefSeq:NP_001104540.1;product=heat shock transcription factor, Y linked 2-like;protein_id=NP_001104540.1;gene_id=Cattle_Y_G01005;transcript_id=Cattle_Y_T01710;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	49897719	49921523	.	-	.	ID=Cattle_Y_G01006;Dbxref=GeneID:132344425;Name=LOC132344425;description=ubiquitin-like modifier-activating enzyme 1;gbkey=Gene;gene=LOC132344425;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G01006;source_id=gene-LOC132344425
haplotype2-0000357	CAT	exon	49897719	49898003	.	-	.	ID=Cattle_Y_T01711;Parent=Cattle_Y_G01006;Dbxref=GeneID:132344425;gbkey=exon;gene=LOC132344425;model_evidence=Supporting evidence includes similarity to: 19 Proteins;pseudo=true;gene_id=Cattle_Y_G01006;transcript_id=Cattle_Y_T01711;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344425-13
haplotype2-0000357	CAT	exon	49899588	49899662	.	-	.	ID=Cattle_Y_T01712;Parent=Cattle_Y_G01006;Dbxref=GeneID:132344425;gbkey=exon;gene=LOC132344425;model_evidence=Supporting evidence includes similarity to: 19 Proteins;pseudo=true;gene_id=Cattle_Y_G01006;transcript_id=Cattle_Y_T01712;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344425-12
haplotype2-0000357	CAT	exon	49900605	49900800	.	-	.	ID=Cattle_Y_T01713;Parent=Cattle_Y_G01006;Dbxref=GeneID:132344425;gbkey=exon;gene=LOC132344425;model_evidence=Supporting evidence includes similarity to: 19 Proteins;pseudo=true;gene_id=Cattle_Y_G01006;transcript_id=Cattle_Y_T01713;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344425-11
haplotype2-0000357	CAT	exon	49901168	49901232	.	-	.	ID=Cattle_Y_T01714;Parent=Cattle_Y_G01006;Dbxref=GeneID:132344425;gbkey=exon;gene=LOC132344425;model_evidence=Supporting evidence includes similarity to: 19 Proteins;pseudo=true;gene_id=Cattle_Y_G01006;transcript_id=Cattle_Y_T01714;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344425-10
haplotype2-0000357	CAT	exon	49902879	49903075	.	-	.	ID=Cattle_Y_T01715;Parent=Cattle_Y_G01006;Dbxref=GeneID:132344425;gbkey=exon;gene=LOC132344425;model_evidence=Supporting evidence includes similarity to: 19 Proteins;pseudo=true;gene_id=Cattle_Y_G01006;transcript_id=Cattle_Y_T01715;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344425-9
haplotype2-0000357	CAT	exon	49903195	49903360	.	-	.	ID=Cattle_Y_T01716;Parent=Cattle_Y_G01006;Dbxref=GeneID:132344425;gbkey=exon;gene=LOC132344425;model_evidence=Supporting evidence includes similarity to: 19 Proteins;pseudo=true;gene_id=Cattle_Y_G01006;transcript_id=Cattle_Y_T01716;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344425-8
haplotype2-0000357	CAT	exon	49905250	49905406	.	-	.	ID=Cattle_Y_T01717;Parent=Cattle_Y_G01006;Dbxref=GeneID:132344425;gbkey=exon;gene=LOC132344425;model_evidence=Supporting evidence includes similarity to: 19 Proteins;pseudo=true;gene_id=Cattle_Y_G01006;transcript_id=Cattle_Y_T01717;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344425-7
haplotype2-0000357	CAT	exon	49905750	49905829	.	-	.	ID=Cattle_Y_T01718;Parent=Cattle_Y_G01006;Dbxref=GeneID:132344425;gbkey=exon;gene=LOC132344425;model_evidence=Supporting evidence includes similarity to: 19 Proteins;pseudo=true;gene_id=Cattle_Y_G01006;transcript_id=Cattle_Y_T01718;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344425-6
haplotype2-0000357	CAT	exon	49905920	49906023	.	-	.	ID=Cattle_Y_T01719;Parent=Cattle_Y_G01006;Dbxref=GeneID:132344425;gbkey=exon;gene=LOC132344425;model_evidence=Supporting evidence includes similarity to: 19 Proteins;pseudo=true;gene_id=Cattle_Y_G01006;transcript_id=Cattle_Y_T01719;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344425-5
haplotype2-0000357	CAT	exon	49906140	49906316	.	-	.	ID=Cattle_Y_T01720;Parent=Cattle_Y_G01006;Dbxref=GeneID:132344425;gbkey=exon;gene=LOC132344425;model_evidence=Supporting evidence includes similarity to: 19 Proteins;pseudo=true;gene_id=Cattle_Y_G01006;transcript_id=Cattle_Y_T01720;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344425-4
haplotype2-0000357	CAT	exon	49906449	49906595	.	-	.	ID=Cattle_Y_T01721;Parent=Cattle_Y_G01006;Dbxref=GeneID:132344425;gbkey=exon;gene=LOC132344425;model_evidence=Supporting evidence includes similarity to: 19 Proteins;pseudo=true;gene_id=Cattle_Y_G01006;transcript_id=Cattle_Y_T01721;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344425-3
haplotype2-0000357	CAT	exon	49906693	49906790	.	-	.	ID=Cattle_Y_T01722;Parent=Cattle_Y_G01006;Dbxref=GeneID:132344425;gbkey=exon;gene=LOC132344425;model_evidence=Supporting evidence includes similarity to: 19 Proteins;pseudo=true;gene_id=Cattle_Y_G01006;transcript_id=Cattle_Y_T01722;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344425-2
haplotype2-0000357	CAT	exon	49921385	49921523	.	-	.	ID=Cattle_Y_T01723;Parent=Cattle_Y_G01006;Dbxref=GeneID:132344425;gbkey=exon;gene=LOC132344425;model_evidence=Supporting evidence includes similarity to: 19 Proteins;pseudo=true;gene_id=Cattle_Y_G01006;transcript_id=Cattle_Y_T01723;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344425
haplotype2-0000357	CAT	gene	49989095	50005120	.	+	.	ID=Cattle_Y_G01007;Dbxref=GeneID:101902149;Name=LOC101902149;description=uncharacterized LOC101902149;gbkey=Gene;gene=LOC101902149;gene_biotype=protein_coding;gene_id=Cattle_Y_G01007;source_id=gene-LOC101902149
haplotype2-0000357	CAT	mRNA	49989095	50005120	.	+	.	ID=Cattle_Y_T01724;Parent=Cattle_Y_G01007;Dbxref=GeneID:101902149,GenBank:NM_001303550.2;Name=NM_001303550.2;gbkey=mRNA;gene=LOC101902149;product=uncharacterized protein;transcript_id=Cattle_Y_T01724;gene_id=Cattle_Y_G01007;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001303550.2
haplotype2-0000357	CAT	exon	49989095	49994019	.	+	.	ID=Cattle_Y_E03455;Parent=Cattle_Y_T01724;Dbxref=GeneID:101902149,GenBank:NM_001303550.2;gbkey=mRNA;gene=LOC101902149;product=uncharacterized protein;transcript_id=Cattle_Y_T01724;gene_id=Cattle_Y_G01007;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001303550.2-1
haplotype2-0000357	CAT	exon	49994525	49994693	.	+	.	ID=Cattle_Y_E03456;Parent=Cattle_Y_T01724;Dbxref=GeneID:101902149,GenBank:NM_001303550.2;gbkey=mRNA;gene=LOC101902149;product=uncharacterized protein;transcript_id=Cattle_Y_T01724;gene_id=Cattle_Y_G01007;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001303550.2-1
haplotype2-0000357	CAT	exon	49995242	49995501	.	+	.	ID=Cattle_Y_E03457;Parent=Cattle_Y_T01724;Dbxref=GeneID:101902149,GenBank:NM_001303550.2;gbkey=mRNA;gene=LOC101902149;product=uncharacterized protein;transcript_id=Cattle_Y_T01724;gene_id=Cattle_Y_G01007;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001303550.2-1
haplotype2-0000357	CAT	exon	49995665	49995798	.	+	.	ID=Cattle_Y_E03458;Parent=Cattle_Y_T01724;Dbxref=GeneID:101902149,GenBank:NM_001303550.2;gbkey=mRNA;gene=LOC101902149;product=uncharacterized protein;transcript_id=Cattle_Y_T01724;gene_id=Cattle_Y_G01007;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001303550.2-1
haplotype2-0000357	CAT	exon	49995908	49996208	.	+	.	ID=Cattle_Y_E03459;Parent=Cattle_Y_T01724;Dbxref=GeneID:101902149,GenBank:NM_001303550.2;gbkey=mRNA;gene=LOC101902149;product=uncharacterized protein;transcript_id=Cattle_Y_T01724;gene_id=Cattle_Y_G01007;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001303550.2-1
haplotype2-0000357	CAT	exon	49997859	49997994	.	+	.	ID=Cattle_Y_E03460;Parent=Cattle_Y_T01724;Dbxref=GeneID:101902149,GenBank:NM_001303550.2;gbkey=mRNA;gene=LOC101902149;product=uncharacterized protein;transcript_id=Cattle_Y_T01724;gene_id=Cattle_Y_G01007;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001303550.2-1
haplotype2-0000357	CAT	exon	49998353	49998600	.	+	.	ID=Cattle_Y_E03461;Parent=Cattle_Y_T01724;Dbxref=GeneID:101902149,GenBank:NM_001303550.2;gbkey=mRNA;gene=LOC101902149;product=uncharacterized protein;transcript_id=Cattle_Y_T01724;gene_id=Cattle_Y_G01007;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001303550.2-1
haplotype2-0000357	CAT	exon	50000653	50000786	.	+	.	ID=Cattle_Y_E03462;Parent=Cattle_Y_T01724;Dbxref=GeneID:101902149,GenBank:NM_001303550.2;gbkey=mRNA;gene=LOC101902149;product=uncharacterized protein;transcript_id=Cattle_Y_T01724;gene_id=Cattle_Y_G01007;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001303550.2-1
haplotype2-0000357	CAT	exon	50004755	50005120	.	+	.	ID=Cattle_Y_E03463;Parent=Cattle_Y_T01724;Dbxref=GeneID:101902149,GenBank:NM_001303550.2;gbkey=mRNA;gene=LOC101902149;product=uncharacterized protein;transcript_id=Cattle_Y_T01724;gene_id=Cattle_Y_G01007;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001303550.2-9
haplotype2-0000357	CAT	CDS	49989141	49994019	.	+	0	ID=Cattle_Y_C03047;Parent=Cattle_Y_T01724;gene_id=Cattle_Y_G01007;transcript_id=Cattle_Y_T01724;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49994525	49994693	.	+	2	ID=Cattle_Y_C03048;Parent=Cattle_Y_T01724;gene_id=Cattle_Y_G01007;transcript_id=Cattle_Y_T01724;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49995242	49995501	.	+	1	ID=Cattle_Y_C03049;Parent=Cattle_Y_T01724;gene_id=Cattle_Y_G01007;transcript_id=Cattle_Y_T01724;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49995665	49995798	.	+	2	ID=Cattle_Y_C03050;Parent=Cattle_Y_T01724;gene_id=Cattle_Y_G01007;transcript_id=Cattle_Y_T01724;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49995908	49996208	.	+	0	ID=Cattle_Y_C03051;Parent=Cattle_Y_T01724;gene_id=Cattle_Y_G01007;transcript_id=Cattle_Y_T01724;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49997859	49997994	.	+	2	ID=Cattle_Y_C03052;Parent=Cattle_Y_T01724;gene_id=Cattle_Y_G01007;transcript_id=Cattle_Y_T01724;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	49998353	49998600	.	+	1	ID=Cattle_Y_C03053;Parent=Cattle_Y_T01724;gene_id=Cattle_Y_G01007;transcript_id=Cattle_Y_T01724;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50000653	50000786	.	+	2	ID=Cattle_Y_C03054;Parent=Cattle_Y_T01724;gene_id=Cattle_Y_G01007;transcript_id=Cattle_Y_T01724;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50004755	50005027	.	+	0	ID=Cattle_Y_C03055;Parent=Cattle_Y_T01724;gene_id=Cattle_Y_G01007;transcript_id=Cattle_Y_T01724;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	50153514	50153586	.	-	.	ID=Cattle_Y_G01008;Dbxref=GeneID:132344399;Name=TRNAC-ACA;description=transfer RNA cysteine (anticodon ACA);gbkey=Gene;gene=TRNAC-ACA;gene_biotype=tRNA;gene_id=Cattle_Y_G01008;source_id=gene-TRNAC-ACA-247
haplotype2-0000357	CAT	tRNA	50153514	50153586	.	-	.	ID=Cattle_Y_T01725;Parent=Cattle_Y_G01008;Dbxref=GeneID:132344399;Note=transfer RNA cysteine (anticodon ACA);anticodon=(pos:2201605..2201607);gbkey=tRNA;gene=TRNAC-ACA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Cys;gene_id=Cattle_Y_G01008;transcript_id=Cattle_Y_T01725;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=rna-TRNAC-ACA-247
haplotype2-0000357	CAT	exon	50153514	50153586	.	-	.	ID=Cattle_Y_E03464;Parent=Cattle_Y_T01725;Dbxref=GeneID:132344399;Note=transfer RNA cysteine (anticodon ACA);anticodon=(pos:2201605..2201607);gbkey=tRNA;gene=TRNAC-ACA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Cys;gene_id=Cattle_Y_G01008;transcript_id=Cattle_Y_T01725;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=exon-TRNAC-ACA-247-1
haplotype2-0000357	CAT	gene	50292636	50292708	.	+	.	ID=Cattle_Y_G01009;Dbxref=GeneID:132344399;Name=TRNAC-ACA;description=transfer RNA cysteine (anticodon ACA);gbkey=Gene;gene=TRNAC-ACA;gene_biotype=tRNA;gene_id=Cattle_Y_G01009;source_id=gene-TRNAC-ACA-247
haplotype2-0000357	CAT	tRNA	50292636	50292708	.	+	.	ID=Cattle_Y_T01726;Parent=Cattle_Y_G01009;Dbxref=GeneID:132344399;Note=transfer RNA cysteine (anticodon ACA);anticodon=(pos:2201605..2201607);gbkey=tRNA;gene=TRNAC-ACA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Cys;gene_id=Cattle_Y_G01009;transcript_id=Cattle_Y_T01726;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=rna-TRNAC-ACA-247
haplotype2-0000357	CAT	exon	50292636	50292708	.	+	.	ID=Cattle_Y_E03465;Parent=Cattle_Y_T01726;Dbxref=GeneID:132344399;Note=transfer RNA cysteine (anticodon ACA);anticodon=(pos:2201605..2201607);gbkey=tRNA;gene=TRNAC-ACA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Cys;gene_id=Cattle_Y_G01009;transcript_id=Cattle_Y_T01726;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=exon-TRNAC-ACA-247-1
haplotype2-0000357	CAT	gene	50411845	50459304	.	+	.	ID=Cattle_Y_G01010;Dbxref=GeneID:132344468;Name=LOC132344468;description=eukaryotic translation initiation factor 2 subunit 3%2C Y-linked;gbkey=Gene;gene=LOC132344468;gene_biotype=protein_coding;gene_id=Cattle_Y_G01010;source_id=gene-LOC132344468
haplotype2-0000357	CAT	mRNA	50411845	50459304	.	+	.	ID=Cattle_Y_T01727;Parent=Cattle_Y_G01010;Dbxref=GeneID:132344468,GenBank:XM_059884063.1;Name=XM_059884063.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344468;model_evidence=Supporting evidence includes similarity to: 3 mRNAs%2C 20 ESTs%2C 29 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 10 samples with support for all annotated introns;product=eukaryotic translation initiation factor 2 subunit 3%2C Y-linked;transcript_id=Cattle_Y_T01727;gene_id=Cattle_Y_G01010;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884063.1
haplotype2-0000357	CAT	exon	50411845	50411930	.	+	.	ID=Cattle_Y_E03466;Parent=Cattle_Y_T01727;Dbxref=GeneID:132344468,GenBank:XM_059884063.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344468;product=eukaryotic translation initiation factor 2 subunit 3, Y-linked;transcript_id=Cattle_Y_T01727;gene_id=Cattle_Y_G01010;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884063.1-1
haplotype2-0000357	CAT	exon	50412576	50412639	.	+	.	ID=Cattle_Y_E03467;Parent=Cattle_Y_T01727;Dbxref=GeneID:132344468,GenBank:XM_059884063.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344468;product=eukaryotic translation initiation factor 2 subunit 3, Y-linked;transcript_id=Cattle_Y_T01727;gene_id=Cattle_Y_G01010;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884063.1-2
haplotype2-0000357	CAT	exon	50413931	50414058	.	+	.	ID=Cattle_Y_E03468;Parent=Cattle_Y_T01727;Dbxref=GeneID:132344468,GenBank:XM_059884063.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344468;product=eukaryotic translation initiation factor 2 subunit 3, Y-linked;transcript_id=Cattle_Y_T01727;gene_id=Cattle_Y_G01010;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884063.1-3
haplotype2-0000357	CAT	exon	50414150	50414271	.	+	.	ID=Cattle_Y_E03469;Parent=Cattle_Y_T01727;Dbxref=GeneID:132344468,GenBank:XM_059884063.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344468;product=eukaryotic translation initiation factor 2 subunit 3, Y-linked;transcript_id=Cattle_Y_T01727;gene_id=Cattle_Y_G01010;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884063.1-4
haplotype2-0000357	CAT	exon	50422541	50422635	.	+	.	ID=Cattle_Y_E03470;Parent=Cattle_Y_T01727;Dbxref=GeneID:132344468,GenBank:XM_059884063.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344468;product=eukaryotic translation initiation factor 2 subunit 3, Y-linked;transcript_id=Cattle_Y_T01727;gene_id=Cattle_Y_G01010;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884063.1-5
haplotype2-0000357	CAT	exon	50424505	50424663	.	+	.	ID=Cattle_Y_E03471;Parent=Cattle_Y_T01727;Dbxref=GeneID:132344468,GenBank:XM_059884063.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344468;product=eukaryotic translation initiation factor 2 subunit 3, Y-linked;transcript_id=Cattle_Y_T01727;gene_id=Cattle_Y_G01010;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884063.1-6
haplotype2-0000357	CAT	exon	50425545	50425679	.	+	.	ID=Cattle_Y_E03472;Parent=Cattle_Y_T01727;Dbxref=GeneID:132344468,GenBank:XM_059884063.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344468;product=eukaryotic translation initiation factor 2 subunit 3, Y-linked;transcript_id=Cattle_Y_T01727;gene_id=Cattle_Y_G01010;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884063.1-7
haplotype2-0000357	CAT	exon	50427290	50427384	.	+	.	ID=Cattle_Y_E03473;Parent=Cattle_Y_T01727;Dbxref=GeneID:132344468,GenBank:XM_059884063.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344468;product=eukaryotic translation initiation factor 2 subunit 3, Y-linked;transcript_id=Cattle_Y_T01727;gene_id=Cattle_Y_G01010;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884063.1-8
haplotype2-0000357	CAT	exon	50427615	50427759	.	+	.	ID=Cattle_Y_E03474;Parent=Cattle_Y_T01727;Dbxref=GeneID:132344468,GenBank:XM_059884063.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344468;product=eukaryotic translation initiation factor 2 subunit 3, Y-linked;transcript_id=Cattle_Y_T01727;gene_id=Cattle_Y_G01010;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884063.1-9
haplotype2-0000357	CAT	exon	50429858	50430027	.	+	.	ID=Cattle_Y_E03475;Parent=Cattle_Y_T01727;Dbxref=GeneID:132344468,GenBank:XM_059884063.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344468;product=eukaryotic translation initiation factor 2 subunit 3, Y-linked;transcript_id=Cattle_Y_T01727;gene_id=Cattle_Y_G01010;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884063.1-10
haplotype2-0000357	CAT	exon	50446159	50446331	.	+	.	ID=Cattle_Y_E03476;Parent=Cattle_Y_T01727;Dbxref=GeneID:132344468,GenBank:XM_059884063.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344468;product=eukaryotic translation initiation factor 2 subunit 3, Y-linked;transcript_id=Cattle_Y_T01727;gene_id=Cattle_Y_G01010;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884063.1-11
haplotype2-0000357	CAT	exon	50458897	50459304	.	+	.	ID=Cattle_Y_E03477;Parent=Cattle_Y_T01727;Dbxref=GeneID:132344468,GenBank:XM_059884063.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344468;product=eukaryotic translation initiation factor 2 subunit 3, Y-linked;transcript_id=Cattle_Y_T01727;gene_id=Cattle_Y_G01010;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884063.1-12
haplotype2-0000357	CAT	CDS	50411859	50411930	.	+	0	ID=Cattle_Y_C03056;Parent=Cattle_Y_T01727;Dbxref=GeneID:132344468,GenBank:XP_059740046.1;Name=XP_059740046.1;gbkey=CDS;gene=LOC132344468;product=eukaryotic translation initiation factor 2 subunit 3, Y-linked;protein_id=XP_059740046.1;gene_id=Cattle_Y_G01010;transcript_id=Cattle_Y_T01727;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50412576	50412639	.	+	0	ID=Cattle_Y_C03057;Parent=Cattle_Y_T01727;Dbxref=GeneID:132344468,GenBank:XP_059740046.1;Name=XP_059740046.1;gbkey=CDS;gene=LOC132344468;product=eukaryotic translation initiation factor 2 subunit 3, Y-linked;protein_id=XP_059740046.1;gene_id=Cattle_Y_G01010;transcript_id=Cattle_Y_T01727;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50413931	50414058	.	+	2	ID=Cattle_Y_C03058;Parent=Cattle_Y_T01727;Dbxref=GeneID:132344468,GenBank:XP_059740046.1;Name=XP_059740046.1;gbkey=CDS;gene=LOC132344468;product=eukaryotic translation initiation factor 2 subunit 3, Y-linked;protein_id=XP_059740046.1;gene_id=Cattle_Y_G01010;transcript_id=Cattle_Y_T01727;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50414150	50414271	.	+	0	ID=Cattle_Y_C03059;Parent=Cattle_Y_T01727;Dbxref=GeneID:132344468,GenBank:XP_059740046.1;Name=XP_059740046.1;gbkey=CDS;gene=LOC132344468;product=eukaryotic translation initiation factor 2 subunit 3, Y-linked;protein_id=XP_059740046.1;gene_id=Cattle_Y_G01010;transcript_id=Cattle_Y_T01727;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50422541	50422635	.	+	1	ID=Cattle_Y_C03060;Parent=Cattle_Y_T01727;Dbxref=GeneID:132344468,GenBank:XP_059740046.1;Name=XP_059740046.1;gbkey=CDS;gene=LOC132344468;product=eukaryotic translation initiation factor 2 subunit 3, Y-linked;protein_id=XP_059740046.1;gene_id=Cattle_Y_G01010;transcript_id=Cattle_Y_T01727;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50424505	50424663	.	+	2	ID=Cattle_Y_C03061;Parent=Cattle_Y_T01727;Dbxref=GeneID:132344468,GenBank:XP_059740046.1;Name=XP_059740046.1;gbkey=CDS;gene=LOC132344468;product=eukaryotic translation initiation factor 2 subunit 3, Y-linked;protein_id=XP_059740046.1;gene_id=Cattle_Y_G01010;transcript_id=Cattle_Y_T01727;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50425545	50425679	.	+	2	ID=Cattle_Y_C03062;Parent=Cattle_Y_T01727;Dbxref=GeneID:132344468,GenBank:XP_059740046.1;Name=XP_059740046.1;gbkey=CDS;gene=LOC132344468;product=eukaryotic translation initiation factor 2 subunit 3, Y-linked;protein_id=XP_059740046.1;gene_id=Cattle_Y_G01010;transcript_id=Cattle_Y_T01727;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50427290	50427384	.	+	2	ID=Cattle_Y_C03063;Parent=Cattle_Y_T01727;Dbxref=GeneID:132344468,GenBank:XP_059740046.1;Name=XP_059740046.1;gbkey=CDS;gene=LOC132344468;product=eukaryotic translation initiation factor 2 subunit 3, Y-linked;protein_id=XP_059740046.1;gene_id=Cattle_Y_G01010;transcript_id=Cattle_Y_T01727;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50427615	50427759	.	+	0	ID=Cattle_Y_C03064;Parent=Cattle_Y_T01727;Dbxref=GeneID:132344468,GenBank:XP_059740046.1;Name=XP_059740046.1;gbkey=CDS;gene=LOC132344468;product=eukaryotic translation initiation factor 2 subunit 3, Y-linked;protein_id=XP_059740046.1;gene_id=Cattle_Y_G01010;transcript_id=Cattle_Y_T01727;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50429858	50430027	.	+	2	ID=Cattle_Y_C03065;Parent=Cattle_Y_T01727;Dbxref=GeneID:132344468,GenBank:XP_059740046.1;Name=XP_059740046.1;gbkey=CDS;gene=LOC132344468;product=eukaryotic translation initiation factor 2 subunit 3, Y-linked;protein_id=XP_059740046.1;gene_id=Cattle_Y_G01010;transcript_id=Cattle_Y_T01727;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50446159	50446331	.	+	0	ID=Cattle_Y_C03066;Parent=Cattle_Y_T01727;Dbxref=GeneID:132344468,GenBank:XP_059740046.1;Name=XP_059740046.1;gbkey=CDS;gene=LOC132344468;product=eukaryotic translation initiation factor 2 subunit 3, Y-linked;protein_id=XP_059740046.1;gene_id=Cattle_Y_G01010;transcript_id=Cattle_Y_T01727;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50458897	50458960	.	+	1	ID=Cattle_Y_C03067;Parent=Cattle_Y_T01727;Dbxref=GeneID:132344468,GenBank:XP_059740046.1;Name=XP_059740046.1;gbkey=CDS;gene=LOC132344468;product=eukaryotic translation initiation factor 2 subunit 3, Y-linked;protein_id=XP_059740046.1;gene_id=Cattle_Y_G01010;transcript_id=Cattle_Y_T01727;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	50475513	50549010	.	+	.	ID=Cattle_Y_G01011;Dbxref=GeneID:280962;Name=ZFY;description=zinc finger protein%2C Y-linked;gbkey=Gene;gene=ZFY;gene_biotype=protein_coding;gene_id=Cattle_Y_G01011;source_id=gene-ZFY
haplotype2-0000357	CAT	mRNA	50525916	50546695	.	+	.	ID=Cattle_Y_T01728;Parent=Cattle_Y_G01011;Dbxref=GeneID:280962,GenBank:NM_177491.1;Name=NM_177491.1;Note=The RefSeq transcript has 11 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZFY;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_177491.1;product=zinc finger protein%2C Y-linked;transcript_id=Cattle_Y_T01728;gene_id=Cattle_Y_G01011;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_177491.1
haplotype2-0000357	CAT	exon	50525916	50525976	.	+	.	ID=Cattle_Y_E03478;Parent=Cattle_Y_T01728;Dbxref=GeneID:280962,GenBank:NM_177491.1;Note=The RefSeq transcript has 11 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZFY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_177491.1;product=zinc finger protein, Y-linked;transcript_id=Cattle_Y_T01728;gene_id=Cattle_Y_G01011;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_177491.1-1
haplotype2-0000357	CAT	exon	50531613	50532182	.	+	.	ID=Cattle_Y_E03479;Parent=Cattle_Y_T01728;Dbxref=GeneID:280962,GenBank:NM_177491.1;Note=The RefSeq transcript has 11 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZFY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_177491.1;product=zinc finger protein, Y-linked;transcript_id=Cattle_Y_T01728;gene_id=Cattle_Y_G01011;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_177491.1-1
haplotype2-0000357	CAT	exon	50542690	50542839	.	+	.	ID=Cattle_Y_E03480;Parent=Cattle_Y_T01728;Dbxref=GeneID:280962,GenBank:NM_177491.1;Note=The RefSeq transcript has 11 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZFY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_177491.1;product=zinc finger protein, Y-linked;transcript_id=Cattle_Y_T01728;gene_id=Cattle_Y_G01011;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_177491.1-1
haplotype2-0000357	CAT	exon	50543238	50543381	.	+	.	ID=Cattle_Y_E03481;Parent=Cattle_Y_T01728;Dbxref=GeneID:280962,GenBank:NM_177491.1;Note=The RefSeq transcript has 11 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZFY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_177491.1;product=zinc finger protein, Y-linked;transcript_id=Cattle_Y_T01728;gene_id=Cattle_Y_G01011;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_177491.1-1
haplotype2-0000357	CAT	exon	50543751	50543906	.	+	.	ID=Cattle_Y_E03482;Parent=Cattle_Y_T01728;Dbxref=GeneID:280962,GenBank:NM_177491.1;Note=The RefSeq transcript has 11 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZFY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_177491.1;product=zinc finger protein, Y-linked;transcript_id=Cattle_Y_T01728;gene_id=Cattle_Y_G01011;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_177491.1-1
haplotype2-0000357	CAT	exon	50544591	50544731	.	+	.	ID=Cattle_Y_E03483;Parent=Cattle_Y_T01728;Dbxref=GeneID:280962,GenBank:NM_177491.1;Note=The RefSeq transcript has 11 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZFY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_177491.1;product=zinc finger protein, Y-linked;transcript_id=Cattle_Y_T01728;gene_id=Cattle_Y_G01011;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_177491.1-1
haplotype2-0000357	CAT	exon	50545512	50546695	.	+	.	ID=Cattle_Y_E03484;Parent=Cattle_Y_T01728;Dbxref=GeneID:280962,GenBank:NM_177491.1;Note=The RefSeq transcript has 11 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ZFY;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_177491.1;product=zinc finger protein, Y-linked;transcript_id=Cattle_Y_T01728;gene_id=Cattle_Y_G01011;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_177491.1-7
haplotype2-0000357	CAT	CDS	50525916	50525976	.	+	0	ID=Cattle_Y_C03068;Parent=Cattle_Y_T01728;gene_id=Cattle_Y_G01011;transcript_id=Cattle_Y_T01728;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50531613	50532182	.	+	2	ID=Cattle_Y_C03069;Parent=Cattle_Y_T01728;gene_id=Cattle_Y_G01011;transcript_id=Cattle_Y_T01728;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50542690	50542839	.	+	2	ID=Cattle_Y_C03070;Parent=Cattle_Y_T01728;gene_id=Cattle_Y_G01011;transcript_id=Cattle_Y_T01728;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50543238	50543381	.	+	2	ID=Cattle_Y_C03071;Parent=Cattle_Y_T01728;gene_id=Cattle_Y_G01011;transcript_id=Cattle_Y_T01728;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50543751	50543906	.	+	2	ID=Cattle_Y_C03072;Parent=Cattle_Y_T01728;gene_id=Cattle_Y_G01011;transcript_id=Cattle_Y_T01728;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50544591	50544731	.	+	2	ID=Cattle_Y_C03073;Parent=Cattle_Y_T01728;gene_id=Cattle_Y_G01011;transcript_id=Cattle_Y_T01728;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50545512	50546695	.	+	2	ID=Cattle_Y_C03074;Parent=Cattle_Y_T01728;gene_id=Cattle_Y_G01011;transcript_id=Cattle_Y_T01728;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	50475513	50549010	.	+	.	ID=Cattle_Y_T01729;Parent=Cattle_Y_G01011;Dbxref=GeneID:280962,GenBank:XM_059883969.1;Name=XM_059883969.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZFY;model_evidence=Supporting evidence includes similarity to: 3 mRNAs%2C 3 ESTs%2C 12 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=zinc finger protein%2C Y-linked%2C transcript variant X1;transcript_id=Cattle_Y_T01729;gene_id=Cattle_Y_G01011;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883969.1
haplotype2-0000357	CAT	exon	50475513	50476396	.	+	.	ID=Cattle_Y_E03485;Parent=Cattle_Y_T01729;Dbxref=GeneID:280962,GenBank:XM_059883969.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZFY;product=zinc finger protein, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01729;gene_id=Cattle_Y_G01011;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883969.1-1
haplotype2-0000357	CAT	exon	50525888	50525976	.	+	.	ID=Cattle_Y_E03486;Parent=Cattle_Y_T01729;Dbxref=GeneID:280962,GenBank:XM_059883969.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZFY;product=zinc finger protein, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01729;gene_id=Cattle_Y_G01011;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883969.1-2
haplotype2-0000357	CAT	exon	50531613	50532182	.	+	.	ID=Cattle_Y_E03487;Parent=Cattle_Y_T01729;Dbxref=GeneID:280962,GenBank:XM_059883969.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZFY;product=zinc finger protein, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01729;gene_id=Cattle_Y_G01011;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883969.1-1
haplotype2-0000357	CAT	exon	50542690	50542839	.	+	.	ID=Cattle_Y_E03488;Parent=Cattle_Y_T01729;Dbxref=GeneID:280962,GenBank:XM_059883969.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZFY;product=zinc finger protein, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01729;gene_id=Cattle_Y_G01011;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883969.1-1
haplotype2-0000357	CAT	exon	50543238	50543381	.	+	.	ID=Cattle_Y_E03489;Parent=Cattle_Y_T01729;Dbxref=GeneID:280962,GenBank:XM_059883969.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZFY;product=zinc finger protein, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01729;gene_id=Cattle_Y_G01011;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883969.1-1
haplotype2-0000357	CAT	exon	50543751	50543906	.	+	.	ID=Cattle_Y_E03490;Parent=Cattle_Y_T01729;Dbxref=GeneID:280962,GenBank:XM_059883969.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZFY;product=zinc finger protein, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01729;gene_id=Cattle_Y_G01011;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883969.1-1
haplotype2-0000357	CAT	exon	50544591	50544731	.	+	.	ID=Cattle_Y_E03491;Parent=Cattle_Y_T01729;Dbxref=GeneID:280962,GenBank:XM_059883969.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZFY;product=zinc finger protein, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01729;gene_id=Cattle_Y_G01011;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883969.1-1
haplotype2-0000357	CAT	exon	50545512	50549010	.	+	.	ID=Cattle_Y_E03492;Parent=Cattle_Y_T01729;Dbxref=GeneID:280962,GenBank:XM_059883969.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZFY;product=zinc finger protein, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01729;gene_id=Cattle_Y_G01011;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883969.1-8
haplotype2-0000357	CAT	CDS	50525916	50525976	.	+	0	ID=Cattle_Y_C03075;Parent=Cattle_Y_T01729;gene_id=Cattle_Y_G01011;transcript_id=Cattle_Y_T01729;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50531613	50532182	.	+	2	ID=Cattle_Y_C03076;Parent=Cattle_Y_T01729;gene_id=Cattle_Y_G01011;transcript_id=Cattle_Y_T01729;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50542690	50542839	.	+	2	ID=Cattle_Y_C03077;Parent=Cattle_Y_T01729;gene_id=Cattle_Y_G01011;transcript_id=Cattle_Y_T01729;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50543238	50543381	.	+	2	ID=Cattle_Y_C03078;Parent=Cattle_Y_T01729;gene_id=Cattle_Y_G01011;transcript_id=Cattle_Y_T01729;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50543751	50543906	.	+	2	ID=Cattle_Y_C03079;Parent=Cattle_Y_T01729;gene_id=Cattle_Y_G01011;transcript_id=Cattle_Y_T01729;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50544591	50544731	.	+	2	ID=Cattle_Y_C03080;Parent=Cattle_Y_T01729;gene_id=Cattle_Y_G01011;transcript_id=Cattle_Y_T01729;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50545512	50546695	.	+	2	ID=Cattle_Y_C03081;Parent=Cattle_Y_T01729;gene_id=Cattle_Y_G01011;transcript_id=Cattle_Y_T01729;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	50670023	50820597	.	+	.	ID=Cattle_Y_G01012;Dbxref=GeneID:132342139;Name=LOC132342139;description=protein Shroom2-like;gbkey=Gene;gene=LOC132342139;gene_biotype=protein_coding;gene_id=Cattle_Y_G01012;source_id=gene-LOC132342139
haplotype2-0000357	CAT	mRNA	50670023	50820597	.	+	.	ID=Cattle_Y_T01730;Parent=Cattle_Y_G01012;Dbxref=GeneID:132342139,GenBank:XM_059884005.1;Name=XM_059884005.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon%3B deleted 1 base in 1 codon;exception=unclassified transcription discrepancy;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342139;model_evidence=Supporting evidence includes similarity to: 4 ESTs%2C 2 Proteins%2C and 78%25 coverage of the annotated genomic feature by RNAseq alignments;product=protein Shroom2-like;transcript_id=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884005.1
haplotype2-0000357	CAT	exon	50670023	50670187	.	+	.	ID=Cattle_Y_E03493;Parent=Cattle_Y_T01730;Dbxref=GeneID:132342139,GenBank:XM_059884005.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;deleted 1 base in 1 codon;exception=unclassified transcription discrepancy;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342139;product=protein Shroom2-like;transcript_id=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884005.1-1
haplotype2-0000357	CAT	exon	50742876	50743027	.	+	.	ID=Cattle_Y_E03494;Parent=Cattle_Y_T01730;Dbxref=GeneID:132342139,GenBank:XM_059884005.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;deleted 1 base in 1 codon;exception=unclassified transcription discrepancy;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342139;product=protein Shroom2-like;transcript_id=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884005.1-1
haplotype2-0000357	CAT	exon	50759895	50760014	.	+	.	ID=Cattle_Y_E03495;Parent=Cattle_Y_T01730;Dbxref=GeneID:132342139,GenBank:XM_059884005.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;deleted 1 base in 1 codon;exception=unclassified transcription discrepancy;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342139;product=protein Shroom2-like;transcript_id=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884005.1-1
haplotype2-0000357	CAT	exon	50768071	50768131	.	+	.	ID=Cattle_Y_E03496;Parent=Cattle_Y_T01730;Dbxref=GeneID:132342139,GenBank:XM_059884005.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;deleted 1 base in 1 codon;exception=unclassified transcription discrepancy;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342139;product=protein Shroom2-like;transcript_id=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884005.1-1
haplotype2-0000357	CAT	exon	50768133	50768307	.	+	.	ID=Cattle_Y_E03497;Parent=Cattle_Y_T01730;Dbxref=GeneID:132342139,GenBank:XM_059884005.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;deleted 1 base in 1 codon;exception=unclassified transcription discrepancy;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342139;product=protein Shroom2-like;transcript_id=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884005.1-1
haplotype2-0000357	CAT	exon	50768310	50770231	.	+	.	ID=Cattle_Y_E03498;Parent=Cattle_Y_T01730;Dbxref=GeneID:132342139,GenBank:XM_059884005.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;deleted 1 base in 1 codon;exception=unclassified transcription discrepancy;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342139;product=protein Shroom2-like;transcript_id=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884005.1-1
haplotype2-0000357	CAT	exon	50771565	50771662	.	+	.	ID=Cattle_Y_E03499;Parent=Cattle_Y_T01730;Dbxref=GeneID:132342139,GenBank:XM_059884005.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;deleted 1 base in 1 codon;exception=unclassified transcription discrepancy;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342139;product=protein Shroom2-like;transcript_id=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884005.1-1
haplotype2-0000357	CAT	exon	50772404	50772495	.	+	.	ID=Cattle_Y_E03500;Parent=Cattle_Y_T01730;Dbxref=GeneID:132342139,GenBank:XM_059884005.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;deleted 1 base in 1 codon;exception=unclassified transcription discrepancy;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342139;product=protein Shroom2-like;transcript_id=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884005.1-1
haplotype2-0000357	CAT	exon	50773312	50773452	.	+	.	ID=Cattle_Y_E03501;Parent=Cattle_Y_T01730;Dbxref=GeneID:132342139,GenBank:XM_059884005.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;deleted 1 base in 1 codon;exception=unclassified transcription discrepancy;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342139;product=protein Shroom2-like;transcript_id=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884005.1-1
haplotype2-0000357	CAT	exon	50778930	50779116	.	+	.	ID=Cattle_Y_E03502;Parent=Cattle_Y_T01730;Dbxref=GeneID:132342139,GenBank:XM_059884005.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;deleted 1 base in 1 codon;exception=unclassified transcription discrepancy;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342139;product=protein Shroom2-like;transcript_id=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884005.1-1
haplotype2-0000357	CAT	exon	50785805	50785903	.	+	.	ID=Cattle_Y_E03503;Parent=Cattle_Y_T01730;Dbxref=GeneID:132342139,GenBank:XM_059884005.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;deleted 1 base in 1 codon;exception=unclassified transcription discrepancy;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342139;product=protein Shroom2-like;transcript_id=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884005.1-1
haplotype2-0000357	CAT	exon	50799552	50799894	.	+	.	ID=Cattle_Y_E03504;Parent=Cattle_Y_T01730;Dbxref=GeneID:132342139,GenBank:XM_059884005.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;deleted 1 base in 1 codon;exception=unclassified transcription discrepancy;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342139;product=protein Shroom2-like;transcript_id=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884005.1-1
haplotype2-0000357	CAT	exon	50799947	50800056	.	+	.	ID=Cattle_Y_E03505;Parent=Cattle_Y_T01730;Dbxref=GeneID:132342139,GenBank:XM_059884005.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;deleted 1 base in 1 codon;exception=unclassified transcription discrepancy;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342139;product=protein Shroom2-like;transcript_id=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884005.1-1
haplotype2-0000357	CAT	exon	50804133	50804654	.	+	.	ID=Cattle_Y_E03506;Parent=Cattle_Y_T01730;Dbxref=GeneID:132342139,GenBank:XM_059884005.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;deleted 1 base in 1 codon;exception=unclassified transcription discrepancy;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342139;product=protein Shroom2-like;transcript_id=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884005.1-1
haplotype2-0000357	CAT	exon	50806443	50806614	.	+	.	ID=Cattle_Y_E03507;Parent=Cattle_Y_T01730;Dbxref=GeneID:132342139,GenBank:XM_059884005.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;deleted 1 base in 1 codon;exception=unclassified transcription discrepancy;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342139;product=protein Shroom2-like;transcript_id=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884005.1-1
haplotype2-0000357	CAT	exon	50815921	50816193	.	+	.	ID=Cattle_Y_E03508;Parent=Cattle_Y_T01730;Dbxref=GeneID:132342139,GenBank:XM_059884005.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;deleted 1 base in 1 codon;exception=unclassified transcription discrepancy;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342139;product=protein Shroom2-like;transcript_id=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884005.1-1
haplotype2-0000357	CAT	exon	50818201	50820597	.	+	.	ID=Cattle_Y_E03509;Parent=Cattle_Y_T01730;Dbxref=GeneID:132342139,GenBank:XM_059884005.1;Note=The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon;deleted 1 base in 1 codon;exception=unclassified transcription discrepancy;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342139;product=protein Shroom2-like;transcript_id=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884005.1-17
haplotype2-0000357	CAT	CDS	50670023	50670187	.	+	0	ID=Cattle_Y_C03082;Parent=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;transcript_id=Cattle_Y_T01730;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50742876	50743027	.	+	0	ID=Cattle_Y_C03083;Parent=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;transcript_id=Cattle_Y_T01730;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50759895	50760014	.	+	1	ID=Cattle_Y_C03084;Parent=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;transcript_id=Cattle_Y_T01730;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50768071	50768131	.	+	1	ID=Cattle_Y_C03085;Parent=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;transcript_id=Cattle_Y_T01730;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50768133	50768307	.	+	0	ID=Cattle_Y_C03086;Parent=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;transcript_id=Cattle_Y_T01730;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50768310	50770231	.	+	2	ID=Cattle_Y_C03087;Parent=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;transcript_id=Cattle_Y_T01730;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50771565	50771662	.	+	0	ID=Cattle_Y_C03088;Parent=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;transcript_id=Cattle_Y_T01730;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50772404	50772495	.	+	1	ID=Cattle_Y_C03089;Parent=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;transcript_id=Cattle_Y_T01730;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50773312	50773452	.	+	2	ID=Cattle_Y_C03090;Parent=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;transcript_id=Cattle_Y_T01730;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50778930	50779116	.	+	2	ID=Cattle_Y_C03091;Parent=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;transcript_id=Cattle_Y_T01730;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50785805	50785903	.	+	1	ID=Cattle_Y_C03092;Parent=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;transcript_id=Cattle_Y_T01730;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50799552	50799894	.	+	1	ID=Cattle_Y_C03093;Parent=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;transcript_id=Cattle_Y_T01730;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50799947	50800056	.	+	0	ID=Cattle_Y_C03094;Parent=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;transcript_id=Cattle_Y_T01730;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50804133	50804654	.	+	1	ID=Cattle_Y_C03095;Parent=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;transcript_id=Cattle_Y_T01730;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50806443	50806614	.	+	1	ID=Cattle_Y_C03096;Parent=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;transcript_id=Cattle_Y_T01730;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50815921	50816193	.	+	0	ID=Cattle_Y_C03097;Parent=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;transcript_id=Cattle_Y_T01730;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50818201	50818467	.	+	0	ID=Cattle_Y_C03098;Parent=Cattle_Y_T01730;gene_id=Cattle_Y_G01012;transcript_id=Cattle_Y_T01730;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	50680050	50680586	.	-	.	ID=Cattle_Y_G01013;Dbxref=GeneID:132344467;Name=LOC132344467;description=large ribosomal subunit protein uL23;gbkey=Gene;gene=LOC132344467;gene_biotype=protein_coding;gene_id=Cattle_Y_G01013;source_id=gene-LOC132344467
haplotype2-0000357	CAT	mRNA	50680050	50680586	.	-	.	ID=Cattle_Y_T01731;Parent=Cattle_Y_G01013;Dbxref=GeneID:132344467,GenBank:XM_059884062.1;Name=XM_059884062.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344467;model_evidence=Supporting evidence includes similarity to: 1 mRNA%2C 2 ESTs%2C 10 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments;product=large ribosomal subunit protein uL23;transcript_id=Cattle_Y_T01731;gene_id=Cattle_Y_G01013;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884062.1
haplotype2-0000357	CAT	exon	50680050	50680586	.	-	.	ID=Cattle_Y_E03510;Parent=Cattle_Y_T01731;Dbxref=GeneID:132344467,GenBank:XM_059884062.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344467;product=large ribosomal subunit protein uL23;transcript_id=Cattle_Y_T01731;gene_id=Cattle_Y_G01013;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884062.1-1
haplotype2-0000357	CAT	CDS	50680103	50680579	.	-	0	ID=Cattle_Y_C03099;Parent=Cattle_Y_T01731;Dbxref=GeneID:132344467,GenBank:XP_059740045.1;Name=XP_059740045.1;gbkey=CDS;gene=LOC132344467;product=large ribosomal subunit protein uL23;protein_id=XP_059740045.1;gene_id=Cattle_Y_G01013;transcript_id=Cattle_Y_T01731;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	50852999	50866158	.	+	.	ID=Cattle_Y_G01014;Dbxref=BGD:BT10315,GeneID:783057;Name=DDX3Y;description=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3%2C Y-linked;gbkey=Gene;gene=DDX3Y;gene_biotype=protein_coding;gene_synonym=DBY;gene_id=Cattle_Y_G01014;source_id=gene-DDX3Y
haplotype2-0000357	CAT	mRNA	50853664	50863882	.	+	.	ID=Cattle_Y_T01732;Parent=Cattle_Y_G01014;Dbxref=GeneID:783057,GenBank:NM_001172595.1,BGD:BT10315;Name=NM_001172595.1;gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3%2C Y-linked;transcript_id=Cattle_Y_T01732;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001172595.1
haplotype2-0000357	CAT	exon	50853664	50853827	.	+	.	ID=Cattle_Y_E03511;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NM_001172595.1,BGD:BT10315;gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;transcript_id=Cattle_Y_T01732;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001172595.1-1
haplotype2-0000357	CAT	exon	50855937	50855997	.	+	.	ID=Cattle_Y_E03512;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NM_001172595.1,BGD:BT10315;gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;transcript_id=Cattle_Y_T01732;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001172595.1-2
haplotype2-0000357	CAT	exon	50857544	50857591	.	+	.	ID=Cattle_Y_E03513;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NM_001172595.1,BGD:BT10315;gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;transcript_id=Cattle_Y_T01732;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001172595.1-3
haplotype2-0000357	CAT	exon	50858090	50858219	.	+	.	ID=Cattle_Y_E03514;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NM_001172595.1,BGD:BT10315;gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;transcript_id=Cattle_Y_T01732;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001172595.1-4
haplotype2-0000357	CAT	exon	50858864	50859022	.	+	.	ID=Cattle_Y_E03515;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NM_001172595.1,BGD:BT10315;gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;transcript_id=Cattle_Y_T01732;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001172595.1-5
haplotype2-0000357	CAT	exon	50859097	50859196	.	+	.	ID=Cattle_Y_E03516;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NM_001172595.1,BGD:BT10315;gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;transcript_id=Cattle_Y_T01732;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001172595.1-6
haplotype2-0000357	CAT	exon	50859603	50859738	.	+	.	ID=Cattle_Y_E03517;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NM_001172595.1,BGD:BT10315;gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;transcript_id=Cattle_Y_T01732;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001172595.1-7
haplotype2-0000357	CAT	exon	50860714	50860799	.	+	.	ID=Cattle_Y_E03518;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NM_001172595.1,BGD:BT10315;gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;transcript_id=Cattle_Y_T01732;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001172595.1-8
haplotype2-0000357	CAT	exon	50861033	50861131	.	+	.	ID=Cattle_Y_E03519;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NM_001172595.1,BGD:BT10315;gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;transcript_id=Cattle_Y_T01732;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001172595.1-9
haplotype2-0000357	CAT	exon	50861216	50861376	.	+	.	ID=Cattle_Y_E03520;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NM_001172595.1,BGD:BT10315;gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;transcript_id=Cattle_Y_T01732;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001172595.1-10
haplotype2-0000357	CAT	exon	50861764	50861908	.	+	.	ID=Cattle_Y_E03521;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NM_001172595.1,BGD:BT10315;gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;transcript_id=Cattle_Y_T01732;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001172595.1-11
haplotype2-0000357	CAT	exon	50862009	50862153	.	+	.	ID=Cattle_Y_E03522;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NM_001172595.1,BGD:BT10315;gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;transcript_id=Cattle_Y_T01732;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001172595.1-12
haplotype2-0000357	CAT	exon	50862382	50862563	.	+	.	ID=Cattle_Y_E03523;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NM_001172595.1,BGD:BT10315;gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;transcript_id=Cattle_Y_T01732;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001172595.1-13
haplotype2-0000357	CAT	exon	50862668	50862785	.	+	.	ID=Cattle_Y_E03524;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NM_001172595.1,BGD:BT10315;gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;transcript_id=Cattle_Y_T01732;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001172595.1-14
haplotype2-0000357	CAT	exon	50862951	50863104	.	+	.	ID=Cattle_Y_E03525;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NM_001172595.1,BGD:BT10315;gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;transcript_id=Cattle_Y_T01732;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001172595.1-15
haplotype2-0000357	CAT	exon	50863398	50863531	.	+	.	ID=Cattle_Y_E03526;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NM_001172595.1,BGD:BT10315;gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;transcript_id=Cattle_Y_T01732;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001172595.1-16
haplotype2-0000357	CAT	exon	50863753	50863882	.	+	.	ID=Cattle_Y_E03527;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NM_001172595.1,BGD:BT10315;gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;transcript_id=Cattle_Y_T01732;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001172595.1-17
haplotype2-0000357	CAT	CDS	50853783	50853827	.	+	0	ID=Cattle_Y_C03100;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NP_001166066.1,BGD:BT10315;Name=NP_001166066.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;protein_id=NP_001166066.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01732;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50855937	50855997	.	+	0	ID=Cattle_Y_C03101;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NP_001166066.1,BGD:BT10315;Name=NP_001166066.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;protein_id=NP_001166066.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01732;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50857544	50857591	.	+	2	ID=Cattle_Y_C03102;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NP_001166066.1,BGD:BT10315;Name=NP_001166066.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;protein_id=NP_001166066.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01732;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50858090	50858219	.	+	2	ID=Cattle_Y_C03103;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NP_001166066.1,BGD:BT10315;Name=NP_001166066.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;protein_id=NP_001166066.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01732;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50858864	50859022	.	+	1	ID=Cattle_Y_C03104;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NP_001166066.1,BGD:BT10315;Name=NP_001166066.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;protein_id=NP_001166066.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01732;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50859097	50859196	.	+	1	ID=Cattle_Y_C03105;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NP_001166066.1,BGD:BT10315;Name=NP_001166066.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;protein_id=NP_001166066.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01732;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50859603	50859738	.	+	0	ID=Cattle_Y_C03106;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NP_001166066.1,BGD:BT10315;Name=NP_001166066.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;protein_id=NP_001166066.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01732;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50860714	50860799	.	+	2	ID=Cattle_Y_C03107;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NP_001166066.1,BGD:BT10315;Name=NP_001166066.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;protein_id=NP_001166066.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01732;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50861033	50861131	.	+	0	ID=Cattle_Y_C03108;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NP_001166066.1,BGD:BT10315;Name=NP_001166066.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;protein_id=NP_001166066.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01732;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50861216	50861376	.	+	0	ID=Cattle_Y_C03109;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NP_001166066.1,BGD:BT10315;Name=NP_001166066.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;protein_id=NP_001166066.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01732;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50861764	50861908	.	+	1	ID=Cattle_Y_C03110;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NP_001166066.1,BGD:BT10315;Name=NP_001166066.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;protein_id=NP_001166066.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01732;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50862009	50862153	.	+	0	ID=Cattle_Y_C03111;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NP_001166066.1,BGD:BT10315;Name=NP_001166066.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;protein_id=NP_001166066.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01732;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50862382	50862563	.	+	2	ID=Cattle_Y_C03112;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NP_001166066.1,BGD:BT10315;Name=NP_001166066.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;protein_id=NP_001166066.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01732;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50862668	50862785	.	+	0	ID=Cattle_Y_C03113;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NP_001166066.1,BGD:BT10315;Name=NP_001166066.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;protein_id=NP_001166066.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01732;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50862951	50863104	.	+	2	ID=Cattle_Y_C03114;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NP_001166066.1,BGD:BT10315;Name=NP_001166066.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;protein_id=NP_001166066.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01732;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50863398	50863531	.	+	1	ID=Cattle_Y_C03115;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NP_001166066.1,BGD:BT10315;Name=NP_001166066.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;protein_id=NP_001166066.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01732;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50863753	50863832	.	+	2	ID=Cattle_Y_C03116;Parent=Cattle_Y_T01732;Dbxref=GeneID:783057,GenBank:NP_001166066.1,BGD:BT10315;Name=NP_001166066.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked;protein_id=NP_001166066.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01732;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	50852999	50866158	.	+	.	ID=Cattle_Y_T01733;Parent=Cattle_Y_G01014;Dbxref=GeneID:783057,GenBank:XM_059883985.1,BGD:BT10315;Name=XM_059883985.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;model_evidence=Supporting evidence includes similarity to: 3 mRNAs%2C 8 ESTs%2C 8 Proteins%2C 4 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3%2C Y-linked%2C transcript variant X1;transcript_id=Cattle_Y_T01733;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883985.1
haplotype2-0000357	CAT	exon	50852999	50853292	.	+	.	ID=Cattle_Y_E03528;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XM_059883985.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01733;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883985.1-1
haplotype2-0000357	CAT	exon	50853691	50853827	.	+	.	ID=Cattle_Y_E03529;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XM_059883985.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01733;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883985.1-2
haplotype2-0000357	CAT	exon	50855937	50855997	.	+	.	ID=Cattle_Y_E03530;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XM_059883985.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01733;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883985.1-3
haplotype2-0000357	CAT	exon	50857544	50857591	.	+	.	ID=Cattle_Y_E03531;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XM_059883985.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01733;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883985.1-4
haplotype2-0000357	CAT	exon	50858090	50858219	.	+	.	ID=Cattle_Y_E03532;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XM_059883985.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01733;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883985.1-5
haplotype2-0000357	CAT	exon	50858864	50859022	.	+	.	ID=Cattle_Y_E03533;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XM_059883985.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01733;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883985.1-6
haplotype2-0000357	CAT	exon	50859097	50859196	.	+	.	ID=Cattle_Y_E03534;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XM_059883985.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01733;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883985.1-7
haplotype2-0000357	CAT	exon	50859603	50859738	.	+	.	ID=Cattle_Y_E03535;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XM_059883985.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01733;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883985.1-8
haplotype2-0000357	CAT	exon	50860714	50860799	.	+	.	ID=Cattle_Y_E03536;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XM_059883985.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01733;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883985.1-9
haplotype2-0000357	CAT	exon	50861033	50861131	.	+	.	ID=Cattle_Y_E03537;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XM_059883985.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01733;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883985.1-10
haplotype2-0000357	CAT	exon	50861216	50861376	.	+	.	ID=Cattle_Y_E03538;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XM_059883985.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01733;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883985.1-11
haplotype2-0000357	CAT	exon	50861764	50861908	.	+	.	ID=Cattle_Y_E03539;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XM_059883985.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01733;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883985.1-12
haplotype2-0000357	CAT	exon	50862009	50862153	.	+	.	ID=Cattle_Y_E03540;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XM_059883985.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01733;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883985.1-13
haplotype2-0000357	CAT	exon	50862382	50862563	.	+	.	ID=Cattle_Y_E03541;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XM_059883985.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01733;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883985.1-14
haplotype2-0000357	CAT	exon	50862668	50862785	.	+	.	ID=Cattle_Y_E03542;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XM_059883985.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01733;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883985.1-15
haplotype2-0000357	CAT	exon	50862951	50863104	.	+	.	ID=Cattle_Y_E03543;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XM_059883985.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01733;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883985.1-16
haplotype2-0000357	CAT	exon	50863398	50863534	.	+	.	ID=Cattle_Y_E03544;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XM_059883985.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01733;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883985.1-17
haplotype2-0000357	CAT	exon	50863753	50866158	.	+	.	ID=Cattle_Y_E03545;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XM_059883985.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01733;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883985.1-18
haplotype2-0000357	CAT	CDS	50853783	50853827	.	+	0	ID=Cattle_Y_C03117;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XP_059739968.1,BGD:BT10315;Name=XP_059739968.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739968.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01733;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50855937	50855997	.	+	0	ID=Cattle_Y_C03118;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XP_059739968.1,BGD:BT10315;Name=XP_059739968.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739968.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01733;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50857544	50857591	.	+	2	ID=Cattle_Y_C03119;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XP_059739968.1,BGD:BT10315;Name=XP_059739968.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739968.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01733;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50858090	50858219	.	+	2	ID=Cattle_Y_C03120;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XP_059739968.1,BGD:BT10315;Name=XP_059739968.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739968.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01733;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50858864	50859022	.	+	1	ID=Cattle_Y_C03121;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XP_059739968.1,BGD:BT10315;Name=XP_059739968.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739968.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01733;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50859097	50859196	.	+	1	ID=Cattle_Y_C03122;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XP_059739968.1,BGD:BT10315;Name=XP_059739968.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739968.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01733;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50859603	50859738	.	+	0	ID=Cattle_Y_C03123;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XP_059739968.1,BGD:BT10315;Name=XP_059739968.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739968.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01733;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50860714	50860799	.	+	2	ID=Cattle_Y_C03124;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XP_059739968.1,BGD:BT10315;Name=XP_059739968.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739968.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01733;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50861033	50861131	.	+	0	ID=Cattle_Y_C03125;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XP_059739968.1,BGD:BT10315;Name=XP_059739968.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739968.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01733;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50861216	50861376	.	+	0	ID=Cattle_Y_C03126;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XP_059739968.1,BGD:BT10315;Name=XP_059739968.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739968.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01733;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50861764	50861908	.	+	1	ID=Cattle_Y_C03127;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XP_059739968.1,BGD:BT10315;Name=XP_059739968.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739968.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01733;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50862009	50862153	.	+	0	ID=Cattle_Y_C03128;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XP_059739968.1,BGD:BT10315;Name=XP_059739968.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739968.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01733;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50862382	50862563	.	+	2	ID=Cattle_Y_C03129;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XP_059739968.1,BGD:BT10315;Name=XP_059739968.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739968.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01733;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50862668	50862785	.	+	0	ID=Cattle_Y_C03130;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XP_059739968.1,BGD:BT10315;Name=XP_059739968.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739968.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01733;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50862951	50863104	.	+	2	ID=Cattle_Y_C03131;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XP_059739968.1,BGD:BT10315;Name=XP_059739968.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739968.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01733;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50863398	50863534	.	+	1	ID=Cattle_Y_C03132;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XP_059739968.1,BGD:BT10315;Name=XP_059739968.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739968.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01733;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50863753	50863832	.	+	2	ID=Cattle_Y_C03133;Parent=Cattle_Y_T01733;Dbxref=GeneID:783057,GenBank:XP_059739968.1,BGD:BT10315;Name=XP_059739968.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739968.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01733;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	50853638	50866158	.	+	.	ID=Cattle_Y_T01734;Parent=Cattle_Y_G01014;Dbxref=GeneID:783057,GenBank:XM_059883986.1,BGD:BT10315;Name=XM_059883986.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;model_evidence=Supporting evidence includes similarity to: 3 mRNAs%2C 8 ESTs%2C 8 Proteins%2C 4 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3%2C Y-linked%2C transcript variant X2;transcript_id=Cattle_Y_T01734;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883986.1
haplotype2-0000357	CAT	exon	50853638	50853827	.	+	.	ID=Cattle_Y_E03546;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XM_059883986.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X2;transcript_id=Cattle_Y_T01734;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883986.1-1
haplotype2-0000357	CAT	exon	50855937	50855997	.	+	.	ID=Cattle_Y_E03547;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XM_059883986.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X2;transcript_id=Cattle_Y_T01734;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883986.1-2
haplotype2-0000357	CAT	exon	50857544	50857591	.	+	.	ID=Cattle_Y_E03548;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XM_059883986.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X2;transcript_id=Cattle_Y_T01734;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883986.1-3
haplotype2-0000357	CAT	exon	50858090	50858219	.	+	.	ID=Cattle_Y_E03549;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XM_059883986.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X2;transcript_id=Cattle_Y_T01734;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883986.1-4
haplotype2-0000357	CAT	exon	50858864	50859022	.	+	.	ID=Cattle_Y_E03550;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XM_059883986.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X2;transcript_id=Cattle_Y_T01734;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883986.1-5
haplotype2-0000357	CAT	exon	50859097	50859196	.	+	.	ID=Cattle_Y_E03551;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XM_059883986.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X2;transcript_id=Cattle_Y_T01734;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883986.1-6
haplotype2-0000357	CAT	exon	50859603	50859738	.	+	.	ID=Cattle_Y_E03552;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XM_059883986.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X2;transcript_id=Cattle_Y_T01734;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883986.1-7
haplotype2-0000357	CAT	exon	50860714	50860799	.	+	.	ID=Cattle_Y_E03553;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XM_059883986.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X2;transcript_id=Cattle_Y_T01734;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883986.1-8
haplotype2-0000357	CAT	exon	50861033	50861131	.	+	.	ID=Cattle_Y_E03554;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XM_059883986.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X2;transcript_id=Cattle_Y_T01734;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883986.1-9
haplotype2-0000357	CAT	exon	50861216	50861376	.	+	.	ID=Cattle_Y_E03555;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XM_059883986.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X2;transcript_id=Cattle_Y_T01734;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883986.1-10
haplotype2-0000357	CAT	exon	50861764	50861908	.	+	.	ID=Cattle_Y_E03556;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XM_059883986.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X2;transcript_id=Cattle_Y_T01734;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883986.1-11
haplotype2-0000357	CAT	exon	50862009	50862153	.	+	.	ID=Cattle_Y_E03557;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XM_059883986.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X2;transcript_id=Cattle_Y_T01734;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883986.1-12
haplotype2-0000357	CAT	exon	50862382	50862563	.	+	.	ID=Cattle_Y_E03558;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XM_059883986.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X2;transcript_id=Cattle_Y_T01734;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883986.1-13
haplotype2-0000357	CAT	exon	50862668	50862785	.	+	.	ID=Cattle_Y_E03559;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XM_059883986.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X2;transcript_id=Cattle_Y_T01734;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883986.1-14
haplotype2-0000357	CAT	exon	50862951	50863104	.	+	.	ID=Cattle_Y_E03560;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XM_059883986.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X2;transcript_id=Cattle_Y_T01734;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883986.1-15
haplotype2-0000357	CAT	exon	50863398	50863534	.	+	.	ID=Cattle_Y_E03561;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XM_059883986.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X2;transcript_id=Cattle_Y_T01734;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883986.1-16
haplotype2-0000357	CAT	exon	50863753	50866158	.	+	.	ID=Cattle_Y_E03562;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XM_059883986.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X2;transcript_id=Cattle_Y_T01734;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883986.1-17
haplotype2-0000357	CAT	CDS	50853783	50853827	.	+	0	ID=Cattle_Y_C03134;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XP_059739969.1,BGD:BT10315;Name=XP_059739969.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739969.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01734;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50855937	50855997	.	+	0	ID=Cattle_Y_C03135;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XP_059739969.1,BGD:BT10315;Name=XP_059739969.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739969.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01734;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50857544	50857591	.	+	2	ID=Cattle_Y_C03136;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XP_059739969.1,BGD:BT10315;Name=XP_059739969.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739969.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01734;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50858090	50858219	.	+	2	ID=Cattle_Y_C03137;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XP_059739969.1,BGD:BT10315;Name=XP_059739969.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739969.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01734;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50858864	50859022	.	+	1	ID=Cattle_Y_C03138;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XP_059739969.1,BGD:BT10315;Name=XP_059739969.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739969.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01734;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50859097	50859196	.	+	1	ID=Cattle_Y_C03139;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XP_059739969.1,BGD:BT10315;Name=XP_059739969.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739969.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01734;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50859603	50859738	.	+	0	ID=Cattle_Y_C03140;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XP_059739969.1,BGD:BT10315;Name=XP_059739969.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739969.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01734;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50860714	50860799	.	+	2	ID=Cattle_Y_C03141;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XP_059739969.1,BGD:BT10315;Name=XP_059739969.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739969.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01734;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50861033	50861131	.	+	0	ID=Cattle_Y_C03142;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XP_059739969.1,BGD:BT10315;Name=XP_059739969.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739969.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01734;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50861216	50861376	.	+	0	ID=Cattle_Y_C03143;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XP_059739969.1,BGD:BT10315;Name=XP_059739969.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739969.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01734;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50861764	50861908	.	+	1	ID=Cattle_Y_C03144;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XP_059739969.1,BGD:BT10315;Name=XP_059739969.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739969.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01734;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50862009	50862153	.	+	0	ID=Cattle_Y_C03145;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XP_059739969.1,BGD:BT10315;Name=XP_059739969.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739969.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01734;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50862382	50862563	.	+	2	ID=Cattle_Y_C03146;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XP_059739969.1,BGD:BT10315;Name=XP_059739969.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739969.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01734;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50862668	50862785	.	+	0	ID=Cattle_Y_C03147;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XP_059739969.1,BGD:BT10315;Name=XP_059739969.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739969.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01734;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50862951	50863104	.	+	2	ID=Cattle_Y_C03148;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XP_059739969.1,BGD:BT10315;Name=XP_059739969.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739969.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01734;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50863398	50863534	.	+	1	ID=Cattle_Y_C03149;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XP_059739969.1,BGD:BT10315;Name=XP_059739969.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739969.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01734;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50863753	50863832	.	+	2	ID=Cattle_Y_C03150;Parent=Cattle_Y_T01734;Dbxref=GeneID:783057,GenBank:XP_059739969.1,BGD:BT10315;Name=XP_059739969.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X1;protein_id=XP_059739969.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01734;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	50852999	50866158	.	+	.	ID=Cattle_Y_T01735;Parent=Cattle_Y_G01014;Dbxref=GeneID:783057,GenBank:XM_059883987.1,BGD:BT10315;Name=XM_059883987.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;model_evidence=Supporting evidence includes similarity to: 3 mRNAs%2C 9 ESTs%2C 37 Proteins%2C 4 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3%2C Y-linked%2C transcript variant X3;transcript_id=Cattle_Y_T01735;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883987.1
haplotype2-0000357	CAT	exon	50852999	50853292	.	+	.	ID=Cattle_Y_E03563;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XM_059883987.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X3;transcript_id=Cattle_Y_T01735;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883987.1-1
haplotype2-0000357	CAT	exon	50853691	50853827	.	+	.	ID=Cattle_Y_E03564;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XM_059883987.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X3;transcript_id=Cattle_Y_T01735;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883987.1-2
haplotype2-0000357	CAT	exon	50855937	50855997	.	+	.	ID=Cattle_Y_E03565;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XM_059883987.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X3;transcript_id=Cattle_Y_T01735;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883987.1-3
haplotype2-0000357	CAT	exon	50857544	50857591	.	+	.	ID=Cattle_Y_E03566;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XM_059883987.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X3;transcript_id=Cattle_Y_T01735;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883987.1-4
haplotype2-0000357	CAT	exon	50858090	50858219	.	+	.	ID=Cattle_Y_E03567;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XM_059883987.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X3;transcript_id=Cattle_Y_T01735;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883987.1-5
haplotype2-0000357	CAT	exon	50858864	50859022	.	+	.	ID=Cattle_Y_E03568;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XM_059883987.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X3;transcript_id=Cattle_Y_T01735;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883987.1-6
haplotype2-0000357	CAT	exon	50859097	50859196	.	+	.	ID=Cattle_Y_E03569;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XM_059883987.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X3;transcript_id=Cattle_Y_T01735;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883987.1-7
haplotype2-0000357	CAT	exon	50859603	50859738	.	+	.	ID=Cattle_Y_E03570;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XM_059883987.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X3;transcript_id=Cattle_Y_T01735;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883987.1-8
haplotype2-0000357	CAT	exon	50860714	50860799	.	+	.	ID=Cattle_Y_E03571;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XM_059883987.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X3;transcript_id=Cattle_Y_T01735;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883987.1-9
haplotype2-0000357	CAT	exon	50861033	50861131	.	+	.	ID=Cattle_Y_E03572;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XM_059883987.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X3;transcript_id=Cattle_Y_T01735;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883987.1-10
haplotype2-0000357	CAT	exon	50861216	50861376	.	+	.	ID=Cattle_Y_E03573;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XM_059883987.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X3;transcript_id=Cattle_Y_T01735;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883987.1-11
haplotype2-0000357	CAT	exon	50861764	50861908	.	+	.	ID=Cattle_Y_E03574;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XM_059883987.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X3;transcript_id=Cattle_Y_T01735;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883987.1-12
haplotype2-0000357	CAT	exon	50862009	50862153	.	+	.	ID=Cattle_Y_E03575;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XM_059883987.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X3;transcript_id=Cattle_Y_T01735;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883987.1-13
haplotype2-0000357	CAT	exon	50862382	50862563	.	+	.	ID=Cattle_Y_E03576;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XM_059883987.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X3;transcript_id=Cattle_Y_T01735;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883987.1-14
haplotype2-0000357	CAT	exon	50862668	50862785	.	+	.	ID=Cattle_Y_E03577;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XM_059883987.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X3;transcript_id=Cattle_Y_T01735;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883987.1-15
haplotype2-0000357	CAT	exon	50862951	50863104	.	+	.	ID=Cattle_Y_E03578;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XM_059883987.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X3;transcript_id=Cattle_Y_T01735;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883987.1-16
haplotype2-0000357	CAT	exon	50863398	50863531	.	+	.	ID=Cattle_Y_E03579;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XM_059883987.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X3;transcript_id=Cattle_Y_T01735;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883987.1-17
haplotype2-0000357	CAT	exon	50863753	50866158	.	+	.	ID=Cattle_Y_E03580;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XM_059883987.1,BGD:BT10315;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, transcript variant X3;transcript_id=Cattle_Y_T01735;gene_id=Cattle_Y_G01014;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883987.1-18
haplotype2-0000357	CAT	CDS	50853783	50853827	.	+	0	ID=Cattle_Y_C03151;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XP_059739970.1,BGD:BT10315;Name=XP_059739970.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X2;protein_id=XP_059739970.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01735;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50855937	50855997	.	+	0	ID=Cattle_Y_C03152;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XP_059739970.1,BGD:BT10315;Name=XP_059739970.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X2;protein_id=XP_059739970.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01735;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50857544	50857591	.	+	2	ID=Cattle_Y_C03153;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XP_059739970.1,BGD:BT10315;Name=XP_059739970.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X2;protein_id=XP_059739970.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01735;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50858090	50858219	.	+	2	ID=Cattle_Y_C03154;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XP_059739970.1,BGD:BT10315;Name=XP_059739970.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X2;protein_id=XP_059739970.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01735;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50858864	50859022	.	+	1	ID=Cattle_Y_C03155;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XP_059739970.1,BGD:BT10315;Name=XP_059739970.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X2;protein_id=XP_059739970.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01735;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50859097	50859196	.	+	1	ID=Cattle_Y_C03156;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XP_059739970.1,BGD:BT10315;Name=XP_059739970.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X2;protein_id=XP_059739970.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01735;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50859603	50859738	.	+	0	ID=Cattle_Y_C03157;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XP_059739970.1,BGD:BT10315;Name=XP_059739970.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X2;protein_id=XP_059739970.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01735;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50860714	50860799	.	+	2	ID=Cattle_Y_C03158;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XP_059739970.1,BGD:BT10315;Name=XP_059739970.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X2;protein_id=XP_059739970.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01735;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50861033	50861131	.	+	0	ID=Cattle_Y_C03159;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XP_059739970.1,BGD:BT10315;Name=XP_059739970.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X2;protein_id=XP_059739970.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01735;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50861216	50861376	.	+	0	ID=Cattle_Y_C03160;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XP_059739970.1,BGD:BT10315;Name=XP_059739970.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X2;protein_id=XP_059739970.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01735;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50861764	50861908	.	+	1	ID=Cattle_Y_C03161;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XP_059739970.1,BGD:BT10315;Name=XP_059739970.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X2;protein_id=XP_059739970.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01735;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50862009	50862153	.	+	0	ID=Cattle_Y_C03162;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XP_059739970.1,BGD:BT10315;Name=XP_059739970.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X2;protein_id=XP_059739970.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01735;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50862382	50862563	.	+	2	ID=Cattle_Y_C03163;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XP_059739970.1,BGD:BT10315;Name=XP_059739970.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X2;protein_id=XP_059739970.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01735;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50862668	50862785	.	+	0	ID=Cattle_Y_C03164;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XP_059739970.1,BGD:BT10315;Name=XP_059739970.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X2;protein_id=XP_059739970.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01735;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50862951	50863104	.	+	2	ID=Cattle_Y_C03165;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XP_059739970.1,BGD:BT10315;Name=XP_059739970.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X2;protein_id=XP_059739970.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01735;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50863398	50863531	.	+	1	ID=Cattle_Y_C03166;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XP_059739970.1,BGD:BT10315;Name=XP_059739970.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X2;protein_id=XP_059739970.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01735;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50863753	50863832	.	+	2	ID=Cattle_Y_C03167;Parent=Cattle_Y_T01735;Dbxref=GeneID:783057,GenBank:XP_059739970.1,BGD:BT10315;Name=XP_059739970.1;gbkey=CDS;gene=DDX3Y;product=DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked isoform X2;protein_id=XP_059739970.1;gene_id=Cattle_Y_G01014;transcript_id=Cattle_Y_T01735;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	50913063	51098492	.	+	.	ID=Cattle_Y_G01015;Dbxref=GeneID:132344466;Name=LOC132344466;description=lysine-specific demethylase 6A;gbkey=Gene;gene=LOC132344466;gene_biotype=protein_coding;gene_id=Cattle_Y_G01015;source_id=gene-LOC132344466
haplotype2-0000357	CAT	mRNA	50913063	51098492	.	+	.	ID=Cattle_Y_T01736;Parent=Cattle_Y_G01015;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;Name=XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;model_evidence=Supporting evidence includes similarity to: 2 mRNAs%2C 10 ESTs%2C 5 Proteins%2C and 97%25 coverage of the annotated genomic feature by RNAseq alignments;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884061.1
haplotype2-0000357	CAT	exon	50913063	50913526	.	+	.	ID=Cattle_Y_E03581;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-1
haplotype2-0000357	CAT	exon	50913720	50913783	.	+	.	ID=Cattle_Y_E03582;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-2
haplotype2-0000357	CAT	exon	50940218	50940326	.	+	.	ID=Cattle_Y_E03583;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-3
haplotype2-0000357	CAT	exon	50962012	50962061	.	+	.	ID=Cattle_Y_E03584;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-4
haplotype2-0000357	CAT	exon	50995255	50995313	.	+	.	ID=Cattle_Y_E03585;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-5
haplotype2-0000357	CAT	exon	51001919	51002039	.	+	.	ID=Cattle_Y_E03586;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-6
haplotype2-0000357	CAT	exon	51008950	51009004	.	+	.	ID=Cattle_Y_E03587;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-7
haplotype2-0000357	CAT	exon	51011656	51011690	.	+	.	ID=Cattle_Y_E03588;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-8
haplotype2-0000357	CAT	exon	51026307	51026400	.	+	.	ID=Cattle_Y_E03589;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-9
haplotype2-0000357	CAT	exon	51028072	51028198	.	+	.	ID=Cattle_Y_E03590;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-10
haplotype2-0000357	CAT	exon	51031466	51031564	.	+	.	ID=Cattle_Y_E03591;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-11
haplotype2-0000357	CAT	exon	51031689	51031908	.	+	.	ID=Cattle_Y_E03592;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-12
haplotype2-0000357	CAT	exon	51032411	51032545	.	+	.	ID=Cattle_Y_E03593;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-13
haplotype2-0000357	CAT	exon	51033008	51033163	.	+	.	ID=Cattle_Y_E03594;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-14
haplotype2-0000357	CAT	exon	51034756	51034851	.	+	.	ID=Cattle_Y_E03595;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-15
haplotype2-0000357	CAT	exon	51035466	51035849	.	+	.	ID=Cattle_Y_E03596;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-16
haplotype2-0000357	CAT	exon	51044525	51045285	.	+	.	ID=Cattle_Y_E03597;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-17
haplotype2-0000357	CAT	exon	51049304	51049433	.	+	.	ID=Cattle_Y_E03598;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-18
haplotype2-0000357	CAT	exon	51051220	51051325	.	+	.	ID=Cattle_Y_E03599;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-19
haplotype2-0000357	CAT	exon	51051843	51052048	.	+	.	ID=Cattle_Y_E03600;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-20
haplotype2-0000357	CAT	exon	51060063	51060127	.	+	.	ID=Cattle_Y_E03601;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-21
haplotype2-0000357	CAT	exon	51060203	51060277	.	+	.	ID=Cattle_Y_E03602;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-22
haplotype2-0000357	CAT	exon	51063922	51064070	.	+	.	ID=Cattle_Y_E03603;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-23
haplotype2-0000357	CAT	exon	51073431	51073545	.	+	.	ID=Cattle_Y_E03604;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-24
haplotype2-0000357	CAT	exon	51074909	51075096	.	+	.	ID=Cattle_Y_E03605;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-25
haplotype2-0000357	CAT	exon	51079404	51079545	.	+	.	ID=Cattle_Y_E03606;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-26
haplotype2-0000357	CAT	exon	51086951	51087077	.	+	.	ID=Cattle_Y_E03607;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-27
haplotype2-0000357	CAT	exon	51095597	51095784	.	+	.	ID=Cattle_Y_E03608;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-28
haplotype2-0000357	CAT	exon	51096778	51098492	.	+	.	ID=Cattle_Y_E03609;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XM_059884061.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132344466;product=lysine-specific demethylase 6A;transcript_id=Cattle_Y_T01736;gene_id=Cattle_Y_G01015;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884061.1-29
haplotype2-0000357	CAT	CDS	50913375	50913526	.	+	0	ID=Cattle_Y_C03168;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50913720	50913783	.	+	1	ID=Cattle_Y_C03169;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50940218	50940326	.	+	0	ID=Cattle_Y_C03170;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50962012	50962061	.	+	2	ID=Cattle_Y_C03171;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	50995255	50995313	.	+	0	ID=Cattle_Y_C03172;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51001919	51002039	.	+	1	ID=Cattle_Y_C03173;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51008950	51009004	.	+	0	ID=Cattle_Y_C03174;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51011656	51011690	.	+	2	ID=Cattle_Y_C03175;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51026307	51026400	.	+	0	ID=Cattle_Y_C03176;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51028072	51028198	.	+	2	ID=Cattle_Y_C03177;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51031466	51031564	.	+	1	ID=Cattle_Y_C03178;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51031689	51031908	.	+	1	ID=Cattle_Y_C03179;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51032411	51032545	.	+	0	ID=Cattle_Y_C03180;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51033008	51033163	.	+	0	ID=Cattle_Y_C03181;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51034756	51034851	.	+	0	ID=Cattle_Y_C03182;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51035466	51035849	.	+	0	ID=Cattle_Y_C03183;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51044525	51045285	.	+	0	ID=Cattle_Y_C03184;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51049304	51049433	.	+	1	ID=Cattle_Y_C03185;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51051220	51051325	.	+	0	ID=Cattle_Y_C03186;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51051843	51052048	.	+	2	ID=Cattle_Y_C03187;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51060063	51060127	.	+	0	ID=Cattle_Y_C03188;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51060203	51060277	.	+	1	ID=Cattle_Y_C03189;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51063922	51064070	.	+	1	ID=Cattle_Y_C03190;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51073431	51073545	.	+	2	ID=Cattle_Y_C03191;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51074909	51075096	.	+	1	ID=Cattle_Y_C03192;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51079404	51079545	.	+	2	ID=Cattle_Y_C03193;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51086951	51087077	.	+	1	ID=Cattle_Y_C03194;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51095597	51095784	.	+	0	ID=Cattle_Y_C03195;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51096778	51096820	.	+	1	ID=Cattle_Y_C03196;Parent=Cattle_Y_T01736;Dbxref=GeneID:132344466,GenBank:XP_059740044.1;Name=XP_059740044.1;gbkey=CDS;gene=LOC132344466;product=lysine-specific demethylase 6A;protein_id=XP_059740044.1;gene_id=Cattle_Y_G01015;transcript_id=Cattle_Y_T01736;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	51127586	51131263	.	-	.	ID=Cattle_Y_G01016;Dbxref=GeneID:132344424;Name=LOC132344424;description=neuronal membrane glycoprotein M6-b-like;gbkey=Gene;gene=LOC132344424;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G01016;source_id=gene-LOC132344424
haplotype2-0000357	CAT	exon	51127586	51127666	.	-	.	ID=Cattle_Y_T01737;Parent=Cattle_Y_G01016;Dbxref=GeneID:132344424;gbkey=exon;gene=LOC132344424;model_evidence=Supporting evidence includes similarity to: 16 Proteins;pseudo=true;gene_id=Cattle_Y_G01016;transcript_id=Cattle_Y_T01737;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344424-4
haplotype2-0000357	CAT	exon	51128052	51128117	.	-	.	ID=Cattle_Y_T01738;Parent=Cattle_Y_G01016;Dbxref=GeneID:132344424;gbkey=exon;gene=LOC132344424;model_evidence=Supporting evidence includes similarity to: 16 Proteins;pseudo=true;gene_id=Cattle_Y_G01016;transcript_id=Cattle_Y_T01738;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344424-3
haplotype2-0000357	CAT	exon	51128997	51129070	.	-	.	ID=Cattle_Y_T01739;Parent=Cattle_Y_G01016;Dbxref=GeneID:132344424;gbkey=exon;gene=LOC132344424;model_evidence=Supporting evidence includes similarity to: 16 Proteins;pseudo=true;gene_id=Cattle_Y_G01016;transcript_id=Cattle_Y_T01739;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344424-2
haplotype2-0000357	CAT	exon	51131092	51131263	.	-	.	ID=Cattle_Y_T01740;Parent=Cattle_Y_G01016;Dbxref=GeneID:132344424;gbkey=exon;gene=LOC132344424;model_evidence=Supporting evidence includes similarity to: 16 Proteins;pseudo=true;gene_id=Cattle_Y_G01016;transcript_id=Cattle_Y_T01740;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344424
haplotype2-0000357	CAT	gene	51154560	51210016	.	+	.	ID=Cattle_Y_G01017;Dbxref=GeneID:100306950;Name=ZRSR2Y;description=zinc finger (CCCH type)%2C RNA-binding motif and serine/arginine rich 2;gbkey=Gene;gene=ZRSR2Y;gene_biotype=protein_coding;gene_id=Cattle_Y_G01017;source_id=gene-ZRSR2Y
haplotype2-0000357	CAT	mRNA	51154560	51210016	.	+	.	ID=Cattle_Y_T01741;Parent=Cattle_Y_G01017;Dbxref=GeneID:100306950,GenBank:XM_059884060.1;Name=XM_059884060.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZRSR2Y;model_evidence=Supporting evidence includes similarity to: 2 mRNAs%2C 6 ESTs%2C 2 Proteins%2C and 98%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 6 samples with support for all annotated introns;product=zinc finger (CCCH type)%2C RNA-binding motif and serine/arginine rich 2;transcript_id=Cattle_Y_T01741;gene_id=Cattle_Y_G01017;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884060.1
haplotype2-0000357	CAT	exon	51154560	51154648	.	+	.	ID=Cattle_Y_E03610;Parent=Cattle_Y_T01741;Dbxref=GeneID:100306950,GenBank:XM_059884060.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZRSR2Y;product=zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2;transcript_id=Cattle_Y_T01741;gene_id=Cattle_Y_G01017;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884060.1-1
haplotype2-0000357	CAT	exon	51154978	51155057	.	+	.	ID=Cattle_Y_E03611;Parent=Cattle_Y_T01741;Dbxref=GeneID:100306950,GenBank:XM_059884060.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZRSR2Y;product=zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2;transcript_id=Cattle_Y_T01741;gene_id=Cattle_Y_G01017;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884060.1-2
haplotype2-0000357	CAT	exon	51185174	51185252	.	+	.	ID=Cattle_Y_E03612;Parent=Cattle_Y_T01741;Dbxref=GeneID:100306950,GenBank:XM_059884060.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZRSR2Y;product=zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2;transcript_id=Cattle_Y_T01741;gene_id=Cattle_Y_G01017;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884060.1-3
haplotype2-0000357	CAT	exon	51188228	51188336	.	+	.	ID=Cattle_Y_E03613;Parent=Cattle_Y_T01741;Dbxref=GeneID:100306950,GenBank:XM_059884060.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZRSR2Y;product=zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2;transcript_id=Cattle_Y_T01741;gene_id=Cattle_Y_G01017;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884060.1-4
haplotype2-0000357	CAT	exon	51188563	51188649	.	+	.	ID=Cattle_Y_E03614;Parent=Cattle_Y_T01741;Dbxref=GeneID:100306950,GenBank:XM_059884060.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZRSR2Y;product=zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2;transcript_id=Cattle_Y_T01741;gene_id=Cattle_Y_G01017;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884060.1-5
haplotype2-0000357	CAT	exon	51192653	51192691	.	+	.	ID=Cattle_Y_E03615;Parent=Cattle_Y_T01741;Dbxref=GeneID:100306950,GenBank:XM_059884060.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZRSR2Y;product=zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2;transcript_id=Cattle_Y_T01741;gene_id=Cattle_Y_G01017;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884060.1-6
haplotype2-0000357	CAT	exon	51193286	51193404	.	+	.	ID=Cattle_Y_E03616;Parent=Cattle_Y_T01741;Dbxref=GeneID:100306950,GenBank:XM_059884060.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZRSR2Y;product=zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2;transcript_id=Cattle_Y_T01741;gene_id=Cattle_Y_G01017;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884060.1-7
haplotype2-0000357	CAT	exon	51202620	51202833	.	+	.	ID=Cattle_Y_E03617;Parent=Cattle_Y_T01741;Dbxref=GeneID:100306950,GenBank:XM_059884060.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZRSR2Y;product=zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2;transcript_id=Cattle_Y_T01741;gene_id=Cattle_Y_G01017;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884060.1-8
haplotype2-0000357	CAT	exon	51205530	51205585	.	+	.	ID=Cattle_Y_E03618;Parent=Cattle_Y_T01741;Dbxref=GeneID:100306950,GenBank:XM_059884060.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZRSR2Y;product=zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2;transcript_id=Cattle_Y_T01741;gene_id=Cattle_Y_G01017;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884060.1-9
haplotype2-0000357	CAT	exon	51206273	51206382	.	+	.	ID=Cattle_Y_E03619;Parent=Cattle_Y_T01741;Dbxref=GeneID:100306950,GenBank:XM_059884060.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZRSR2Y;product=zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2;transcript_id=Cattle_Y_T01741;gene_id=Cattle_Y_G01017;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884060.1-10
haplotype2-0000357	CAT	exon	51209549	51210016	.	+	.	ID=Cattle_Y_E03620;Parent=Cattle_Y_T01741;Dbxref=GeneID:100306950,GenBank:XM_059884060.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZRSR2Y;product=zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2;transcript_id=Cattle_Y_T01741;gene_id=Cattle_Y_G01017;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884060.1-11
haplotype2-0000357	CAT	CDS	51154605	51154648	.	+	0	ID=Cattle_Y_C03197;Parent=Cattle_Y_T01741;Dbxref=GeneID:100306950,GenBank:XP_059740043.1;Name=XP_059740043.1;gbkey=CDS;gene=ZRSR2Y;product=U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2;protein_id=XP_059740043.1;gene_id=Cattle_Y_G01017;transcript_id=Cattle_Y_T01741;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51154978	51155057	.	+	1	ID=Cattle_Y_C03198;Parent=Cattle_Y_T01741;Dbxref=GeneID:100306950,GenBank:XP_059740043.1;Name=XP_059740043.1;gbkey=CDS;gene=ZRSR2Y;product=U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2;protein_id=XP_059740043.1;gene_id=Cattle_Y_G01017;transcript_id=Cattle_Y_T01741;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51185174	51185252	.	+	2	ID=Cattle_Y_C03199;Parent=Cattle_Y_T01741;Dbxref=GeneID:100306950,GenBank:XP_059740043.1;Name=XP_059740043.1;gbkey=CDS;gene=ZRSR2Y;product=U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2;protein_id=XP_059740043.1;gene_id=Cattle_Y_G01017;transcript_id=Cattle_Y_T01741;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51188228	51188336	.	+	1	ID=Cattle_Y_C03200;Parent=Cattle_Y_T01741;Dbxref=GeneID:100306950,GenBank:XP_059740043.1;Name=XP_059740043.1;gbkey=CDS;gene=ZRSR2Y;product=U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2;protein_id=XP_059740043.1;gene_id=Cattle_Y_G01017;transcript_id=Cattle_Y_T01741;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51188563	51188649	.	+	0	ID=Cattle_Y_C03201;Parent=Cattle_Y_T01741;Dbxref=GeneID:100306950,GenBank:XP_059740043.1;Name=XP_059740043.1;gbkey=CDS;gene=ZRSR2Y;product=U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2;protein_id=XP_059740043.1;gene_id=Cattle_Y_G01017;transcript_id=Cattle_Y_T01741;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51192653	51192691	.	+	0	ID=Cattle_Y_C03202;Parent=Cattle_Y_T01741;Dbxref=GeneID:100306950,GenBank:XP_059740043.1;Name=XP_059740043.1;gbkey=CDS;gene=ZRSR2Y;product=U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2;protein_id=XP_059740043.1;gene_id=Cattle_Y_G01017;transcript_id=Cattle_Y_T01741;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51193286	51193404	.	+	0	ID=Cattle_Y_C03203;Parent=Cattle_Y_T01741;Dbxref=GeneID:100306950,GenBank:XP_059740043.1;Name=XP_059740043.1;gbkey=CDS;gene=ZRSR2Y;product=U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2;protein_id=XP_059740043.1;gene_id=Cattle_Y_G01017;transcript_id=Cattle_Y_T01741;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51202620	51202833	.	+	1	ID=Cattle_Y_C03204;Parent=Cattle_Y_T01741;Dbxref=GeneID:100306950,GenBank:XP_059740043.1;Name=XP_059740043.1;gbkey=CDS;gene=ZRSR2Y;product=U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2;protein_id=XP_059740043.1;gene_id=Cattle_Y_G01017;transcript_id=Cattle_Y_T01741;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51205530	51205585	.	+	0	ID=Cattle_Y_C03205;Parent=Cattle_Y_T01741;Dbxref=GeneID:100306950,GenBank:XP_059740043.1;Name=XP_059740043.1;gbkey=CDS;gene=ZRSR2Y;product=U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2;protein_id=XP_059740043.1;gene_id=Cattle_Y_G01017;transcript_id=Cattle_Y_T01741;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51206273	51206382	.	+	1	ID=Cattle_Y_C03206;Parent=Cattle_Y_T01741;Dbxref=GeneID:100306950,GenBank:XP_059740043.1;Name=XP_059740043.1;gbkey=CDS;gene=ZRSR2Y;product=U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2;protein_id=XP_059740043.1;gene_id=Cattle_Y_G01017;transcript_id=Cattle_Y_T01741;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51209549	51209970	.	+	2	ID=Cattle_Y_C03207;Parent=Cattle_Y_T01741;Dbxref=GeneID:100306950,GenBank:XP_059740043.1;Name=XP_059740043.1;gbkey=CDS;gene=ZRSR2Y;product=U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2;protein_id=XP_059740043.1;gene_id=Cattle_Y_G01017;transcript_id=Cattle_Y_T01741;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	51195327	51195871	.	-	.	ID=Cattle_Y_G01018;Dbxref=GeneID:100336906;Name=LOC100336906;description=deoxyuridine 5'-triphosphate nucleotidohydrolase%2C mitochondrial pseudogene;gbkey=Gene;gene=LOC100336906;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G01018;source_id=gene-LOC100336906
haplotype2-0000357	CAT	gene	51289091	51416185	.	+	.	ID=Cattle_Y_G01019;Dbxref=GeneID:100271721;Name=USP9Y;description=ubiquitin specific peptidase 9%2C Y-linked;gbkey=Gene;gene=USP9Y;gene_biotype=protein_coding;gene_id=Cattle_Y_G01019;source_id=gene-USP9Y
haplotype2-0000357	CAT	mRNA	51289218	51416183	.	+	.	ID=Cattle_Y_T01742;Parent=Cattle_Y_G01019;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;Name=NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9%2C Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001145509.2
haplotype2-0000357	CAT	exon	51289218	51289334	.	+	.	ID=Cattle_Y_E03621;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-1
haplotype2-0000357	CAT	exon	51298509	51298654	.	+	.	ID=Cattle_Y_E03622;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-2
haplotype2-0000357	CAT	exon	51302093	51302172	.	+	.	ID=Cattle_Y_E03623;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-3
haplotype2-0000357	CAT	exon	51304736	51304848	.	+	.	ID=Cattle_Y_E03624;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-4
haplotype2-0000357	CAT	exon	51306177	51306395	.	+	.	ID=Cattle_Y_E03625;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-5
haplotype2-0000357	CAT	exon	51308491	51308606	.	+	.	ID=Cattle_Y_E03626;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-6
haplotype2-0000357	CAT	exon	51308805	51309056	.	+	.	ID=Cattle_Y_E03627;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-7
haplotype2-0000357	CAT	exon	51309131	51309269	.	+	.	ID=Cattle_Y_E03628;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-8
haplotype2-0000357	CAT	exon	51312517	51312669	.	+	.	ID=Cattle_Y_E03629;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-9
haplotype2-0000357	CAT	exon	51313909	51314013	.	+	.	ID=Cattle_Y_E03630;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-10
haplotype2-0000357	CAT	exon	51325353	51325559	.	+	.	ID=Cattle_Y_E03631;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-11
haplotype2-0000357	CAT	exon	51326591	51326727	.	+	.	ID=Cattle_Y_E03632;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-12
haplotype2-0000357	CAT	exon	51328761	51328894	.	+	.	ID=Cattle_Y_E03633;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-13
haplotype2-0000357	CAT	exon	51336670	51336757	.	+	.	ID=Cattle_Y_E03634;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-14
haplotype2-0000357	CAT	exon	51344424	51344766	.	+	.	ID=Cattle_Y_E03635;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-15
haplotype2-0000357	CAT	exon	51345969	51346064	.	+	.	ID=Cattle_Y_E03636;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-16
haplotype2-0000357	CAT	exon	51347178	51347389	.	+	.	ID=Cattle_Y_E03637;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-17
haplotype2-0000357	CAT	exon	51348564	51348804	.	+	.	ID=Cattle_Y_E03638;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-18
haplotype2-0000357	CAT	exon	51349118	51349267	.	+	.	ID=Cattle_Y_E03639;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-19
haplotype2-0000357	CAT	exon	51350023	51350143	.	+	.	ID=Cattle_Y_E03640;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-20
haplotype2-0000357	CAT	exon	51359794	51359924	.	+	.	ID=Cattle_Y_E03641;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-21
haplotype2-0000357	CAT	exon	51360098	51360376	.	+	.	ID=Cattle_Y_E03642;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-22
haplotype2-0000357	CAT	exon	51363860	51363985	.	+	.	ID=Cattle_Y_E03643;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-23
haplotype2-0000357	CAT	exon	51365222	51365347	.	+	.	ID=Cattle_Y_E03644;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-24
haplotype2-0000357	CAT	exon	51366358	51366527	.	+	.	ID=Cattle_Y_E03645;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-25
haplotype2-0000357	CAT	exon	51369808	51369916	.	+	.	ID=Cattle_Y_E03646;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-26
haplotype2-0000357	CAT	exon	51370264	51370410	.	+	.	ID=Cattle_Y_E03647;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-27
haplotype2-0000357	CAT	exon	51371493	51371639	.	+	.	ID=Cattle_Y_E03648;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-28
haplotype2-0000357	CAT	exon	51373682	51373904	.	+	.	ID=Cattle_Y_E03649;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-29
haplotype2-0000357	CAT	exon	51382584	51382804	.	+	.	ID=Cattle_Y_E03650;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-30
haplotype2-0000357	CAT	exon	51384568	51384758	.	+	.	ID=Cattle_Y_E03651;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-31
haplotype2-0000357	CAT	exon	51390512	51390685	.	+	.	ID=Cattle_Y_E03652;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-32
haplotype2-0000357	CAT	exon	51392894	51393035	.	+	.	ID=Cattle_Y_E03653;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-33
haplotype2-0000357	CAT	exon	51394215	51394962	.	+	.	ID=Cattle_Y_E03654;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-34
haplotype2-0000357	CAT	exon	51395249	51395372	.	+	.	ID=Cattle_Y_E03655;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-35
haplotype2-0000357	CAT	exon	51396069	51396294	.	+	.	ID=Cattle_Y_E03656;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-36
haplotype2-0000357	CAT	exon	51396803	51396932	.	+	.	ID=Cattle_Y_E03657;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-37
haplotype2-0000357	CAT	exon	51406813	51406998	.	+	.	ID=Cattle_Y_E03658;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-38
haplotype2-0000357	CAT	exon	51407383	51407603	.	+	.	ID=Cattle_Y_E03659;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-39
haplotype2-0000357	CAT	exon	51407687	51407775	.	+	.	ID=Cattle_Y_E03660;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-40
haplotype2-0000357	CAT	exon	51411483	51411639	.	+	.	ID=Cattle_Y_E03661;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-41
haplotype2-0000357	CAT	exon	51411791	51412003	.	+	.	ID=Cattle_Y_E03662;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-42
haplotype2-0000357	CAT	exon	51412384	51412479	.	+	.	ID=Cattle_Y_E03663;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-43
haplotype2-0000357	CAT	exon	51414616	51416183	.	+	.	ID=Cattle_Y_E03664;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NM_001145509.2;gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked;transcript_id=Cattle_Y_T01742;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145509.2-44
haplotype2-0000357	CAT	CDS	51289242	51289334	.	+	0	ID=Cattle_Y_C03208;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51298509	51298654	.	+	0	ID=Cattle_Y_C03209;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51302093	51302172	.	+	1	ID=Cattle_Y_C03210;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51304736	51304848	.	+	2	ID=Cattle_Y_C03211;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51306177	51306395	.	+	0	ID=Cattle_Y_C03212;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51308491	51308606	.	+	0	ID=Cattle_Y_C03213;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51308805	51309056	.	+	1	ID=Cattle_Y_C03214;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51309131	51309269	.	+	1	ID=Cattle_Y_C03215;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51312517	51312669	.	+	0	ID=Cattle_Y_C03216;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51313909	51314013	.	+	0	ID=Cattle_Y_C03217;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51325353	51325559	.	+	0	ID=Cattle_Y_C03218;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51326591	51326727	.	+	0	ID=Cattle_Y_C03219;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51328761	51328894	.	+	1	ID=Cattle_Y_C03220;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51336670	51336757	.	+	2	ID=Cattle_Y_C03221;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51344424	51344766	.	+	1	ID=Cattle_Y_C03222;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51345969	51346064	.	+	0	ID=Cattle_Y_C03223;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51347178	51347389	.	+	0	ID=Cattle_Y_C03224;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51348564	51348804	.	+	1	ID=Cattle_Y_C03225;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51349118	51349267	.	+	0	ID=Cattle_Y_C03226;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51350023	51350143	.	+	0	ID=Cattle_Y_C03227;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51359794	51359924	.	+	2	ID=Cattle_Y_C03228;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51360098	51360376	.	+	0	ID=Cattle_Y_C03229;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51363860	51363985	.	+	0	ID=Cattle_Y_C03230;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51365222	51365347	.	+	0	ID=Cattle_Y_C03231;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51366358	51366527	.	+	0	ID=Cattle_Y_C03232;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51369808	51369916	.	+	1	ID=Cattle_Y_C03233;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51370264	51370410	.	+	0	ID=Cattle_Y_C03234;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51371493	51371639	.	+	0	ID=Cattle_Y_C03235;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51373682	51373904	.	+	0	ID=Cattle_Y_C03236;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51382584	51382804	.	+	2	ID=Cattle_Y_C03237;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51384568	51384758	.	+	0	ID=Cattle_Y_C03238;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51390512	51390685	.	+	1	ID=Cattle_Y_C03239;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51392894	51393035	.	+	1	ID=Cattle_Y_C03240;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51394215	51394962	.	+	0	ID=Cattle_Y_C03241;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51395249	51395372	.	+	2	ID=Cattle_Y_C03242;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51396069	51396294	.	+	1	ID=Cattle_Y_C03243;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51396803	51396932	.	+	0	ID=Cattle_Y_C03244;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51406813	51406998	.	+	2	ID=Cattle_Y_C03245;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51407383	51407603	.	+	2	ID=Cattle_Y_C03246;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51407687	51407775	.	+	0	ID=Cattle_Y_C03247;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51411483	51411639	.	+	1	ID=Cattle_Y_C03248;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51411791	51412003	.	+	0	ID=Cattle_Y_C03249;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51412384	51412479	.	+	0	ID=Cattle_Y_C03250;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51414616	51414753	.	+	0	ID=Cattle_Y_C03251;Parent=Cattle_Y_T01742;Dbxref=GeneID:100271721,GenBank:NP_001138981.1;Name=NP_001138981.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y;protein_id=NP_001138981.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01742;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	51289091	51416185	.	+	.	ID=Cattle_Y_T01743;Parent=Cattle_Y_G01019;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;Name=XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;model_evidence=Supporting evidence includes similarity to: 1 mRNA%2C 16 ESTs%2C 3 Proteins%2C and 97%25 coverage of the annotated genomic feature by RNAseq alignments;product=ubiquitin specific peptidase 9%2C Y-linked%2C transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883965.1
haplotype2-0000357	CAT	exon	51289091	51289334	.	+	.	ID=Cattle_Y_E03665;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-1
haplotype2-0000357	CAT	exon	51298509	51298654	.	+	.	ID=Cattle_Y_E03666;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-2
haplotype2-0000357	CAT	exon	51302093	51302172	.	+	.	ID=Cattle_Y_E03667;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-3
haplotype2-0000357	CAT	exon	51304736	51304848	.	+	.	ID=Cattle_Y_E03668;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-4
haplotype2-0000357	CAT	exon	51306177	51306395	.	+	.	ID=Cattle_Y_E03669;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-5
haplotype2-0000357	CAT	exon	51308491	51308606	.	+	.	ID=Cattle_Y_E03670;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-6
haplotype2-0000357	CAT	exon	51308805	51309056	.	+	.	ID=Cattle_Y_E03671;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-7
haplotype2-0000357	CAT	exon	51309131	51309269	.	+	.	ID=Cattle_Y_E03672;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-8
haplotype2-0000357	CAT	exon	51312517	51312669	.	+	.	ID=Cattle_Y_E03673;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-9
haplotype2-0000357	CAT	exon	51313909	51314013	.	+	.	ID=Cattle_Y_E03674;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-10
haplotype2-0000357	CAT	exon	51325353	51325559	.	+	.	ID=Cattle_Y_E03675;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-11
haplotype2-0000357	CAT	exon	51326591	51326727	.	+	.	ID=Cattle_Y_E03676;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-12
haplotype2-0000357	CAT	exon	51328761	51328894	.	+	.	ID=Cattle_Y_E03677;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-13
haplotype2-0000357	CAT	exon	51336670	51336757	.	+	.	ID=Cattle_Y_E03678;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-14
haplotype2-0000357	CAT	exon	51344424	51344766	.	+	.	ID=Cattle_Y_E03679;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-15
haplotype2-0000357	CAT	exon	51345969	51346064	.	+	.	ID=Cattle_Y_E03680;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-16
haplotype2-0000357	CAT	exon	51347178	51347389	.	+	.	ID=Cattle_Y_E03681;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-17
haplotype2-0000357	CAT	exon	51348564	51348804	.	+	.	ID=Cattle_Y_E03682;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-18
haplotype2-0000357	CAT	exon	51349118	51349267	.	+	.	ID=Cattle_Y_E03683;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-19
haplotype2-0000357	CAT	exon	51350023	51350143	.	+	.	ID=Cattle_Y_E03684;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-20
haplotype2-0000357	CAT	exon	51359794	51359924	.	+	.	ID=Cattle_Y_E03685;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-21
haplotype2-0000357	CAT	exon	51360098	51360376	.	+	.	ID=Cattle_Y_E03686;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-22
haplotype2-0000357	CAT	exon	51363860	51363985	.	+	.	ID=Cattle_Y_E03687;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-23
haplotype2-0000357	CAT	exon	51365222	51365347	.	+	.	ID=Cattle_Y_E03688;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-24
haplotype2-0000357	CAT	exon	51366358	51366527	.	+	.	ID=Cattle_Y_E03689;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-25
haplotype2-0000357	CAT	exon	51369808	51369916	.	+	.	ID=Cattle_Y_E03690;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-26
haplotype2-0000357	CAT	exon	51370264	51370410	.	+	.	ID=Cattle_Y_E03691;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-27
haplotype2-0000357	CAT	exon	51371493	51371639	.	+	.	ID=Cattle_Y_E03692;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-28
haplotype2-0000357	CAT	exon	51373682	51373904	.	+	.	ID=Cattle_Y_E03693;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-29
haplotype2-0000357	CAT	exon	51382584	51382804	.	+	.	ID=Cattle_Y_E03694;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-30
haplotype2-0000357	CAT	exon	51384568	51384758	.	+	.	ID=Cattle_Y_E03695;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-31
haplotype2-0000357	CAT	exon	51390512	51390685	.	+	.	ID=Cattle_Y_E03696;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-32
haplotype2-0000357	CAT	exon	51392894	51393035	.	+	.	ID=Cattle_Y_E03697;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-33
haplotype2-0000357	CAT	exon	51394215	51394962	.	+	.	ID=Cattle_Y_E03698;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-34
haplotype2-0000357	CAT	exon	51395249	51395372	.	+	.	ID=Cattle_Y_E03699;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-35
haplotype2-0000357	CAT	exon	51396069	51396294	.	+	.	ID=Cattle_Y_E03700;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-36
haplotype2-0000357	CAT	exon	51396803	51396932	.	+	.	ID=Cattle_Y_E03701;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-37
haplotype2-0000357	CAT	exon	51406813	51406998	.	+	.	ID=Cattle_Y_E03702;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-38
haplotype2-0000357	CAT	exon	51407383	51407603	.	+	.	ID=Cattle_Y_E03703;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-39
haplotype2-0000357	CAT	exon	51407687	51407775	.	+	.	ID=Cattle_Y_E03704;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-40
haplotype2-0000357	CAT	exon	51411483	51411639	.	+	.	ID=Cattle_Y_E03705;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-41
haplotype2-0000357	CAT	exon	51411791	51412051	.	+	.	ID=Cattle_Y_E03706;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-42
haplotype2-0000357	CAT	exon	51412384	51412479	.	+	.	ID=Cattle_Y_E03707;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-43
haplotype2-0000357	CAT	exon	51414616	51416185	.	+	.	ID=Cattle_Y_E03708;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XM_059883965.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=USP9Y;product=ubiquitin specific peptidase 9, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01743;gene_id=Cattle_Y_G01019;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883965.1-44
haplotype2-0000357	CAT	CDS	51289242	51289334	.	+	0	ID=Cattle_Y_C03252;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51298509	51298654	.	+	0	ID=Cattle_Y_C03253;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51302093	51302172	.	+	1	ID=Cattle_Y_C03254;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51304736	51304848	.	+	2	ID=Cattle_Y_C03255;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51306177	51306395	.	+	0	ID=Cattle_Y_C03256;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51308491	51308606	.	+	0	ID=Cattle_Y_C03257;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51308805	51309056	.	+	1	ID=Cattle_Y_C03258;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51309131	51309269	.	+	1	ID=Cattle_Y_C03259;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51312517	51312669	.	+	0	ID=Cattle_Y_C03260;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51313909	51314013	.	+	0	ID=Cattle_Y_C03261;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51325353	51325559	.	+	0	ID=Cattle_Y_C03262;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51326591	51326727	.	+	0	ID=Cattle_Y_C03263;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51328761	51328894	.	+	1	ID=Cattle_Y_C03264;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51336670	51336757	.	+	2	ID=Cattle_Y_C03265;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51344424	51344766	.	+	1	ID=Cattle_Y_C03266;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51345969	51346064	.	+	0	ID=Cattle_Y_C03267;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51347178	51347389	.	+	0	ID=Cattle_Y_C03268;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51348564	51348804	.	+	1	ID=Cattle_Y_C03269;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51349118	51349267	.	+	0	ID=Cattle_Y_C03270;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51350023	51350143	.	+	0	ID=Cattle_Y_C03271;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51359794	51359924	.	+	2	ID=Cattle_Y_C03272;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51360098	51360376	.	+	0	ID=Cattle_Y_C03273;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51363860	51363985	.	+	0	ID=Cattle_Y_C03274;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51365222	51365347	.	+	0	ID=Cattle_Y_C03275;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51366358	51366527	.	+	0	ID=Cattle_Y_C03276;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51369808	51369916	.	+	1	ID=Cattle_Y_C03277;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51370264	51370410	.	+	0	ID=Cattle_Y_C03278;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51371493	51371639	.	+	0	ID=Cattle_Y_C03279;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51373682	51373904	.	+	0	ID=Cattle_Y_C03280;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51382584	51382804	.	+	2	ID=Cattle_Y_C03281;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51384568	51384758	.	+	0	ID=Cattle_Y_C03282;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51390512	51390685	.	+	1	ID=Cattle_Y_C03283;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51392894	51393035	.	+	1	ID=Cattle_Y_C03284;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51394215	51394962	.	+	0	ID=Cattle_Y_C03285;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51395249	51395372	.	+	2	ID=Cattle_Y_C03286;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51396069	51396294	.	+	1	ID=Cattle_Y_C03287;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51396803	51396932	.	+	0	ID=Cattle_Y_C03288;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51406813	51406998	.	+	2	ID=Cattle_Y_C03289;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51407383	51407603	.	+	2	ID=Cattle_Y_C03290;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51407687	51407775	.	+	0	ID=Cattle_Y_C03291;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51411483	51411639	.	+	1	ID=Cattle_Y_C03292;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51411791	51412051	.	+	0	ID=Cattle_Y_C03293;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51412384	51412479	.	+	0	ID=Cattle_Y_C03294;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51414616	51414753	.	+	0	ID=Cattle_Y_C03295;Parent=Cattle_Y_T01743;Dbxref=GeneID:100271721,GenBank:XP_059739948.1;Name=XP_059739948.1;gbkey=CDS;gene=USP9Y;product=probable ubiquitin carboxyl-terminal hydrolase FAF-Y isoform X1;protein_id=XP_059739948.1;gene_id=Cattle_Y_G01019;transcript_id=Cattle_Y_T01743;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	51498793	51562401	.	-	.	ID=Cattle_Y_G01020;Dbxref=GeneID:100271757;Name=LOC100271757;description=Y-linked oral-facial-digital syndrome 1 pseudogene;gbkey=Gene;gene=LOC100271757;gene_biotype=pseudogene;gene_synonym=OFD1Y;pseudo=true;gene_id=Cattle_Y_G01020;source_id=gene-LOC100271757
haplotype2-0000357	CAT	gene	51498793	51562401	.	-	.	ID=Cattle_Y_G01021;Dbxref=GeneID:100335202;Name=LOC100335202;description=oral-facial-digital syndrome 1 Y-linked;gbkey=Gene;gene=LOC100335202;gene_biotype=protein_coding;gene_synonym=OFD1Y;gene_id=Cattle_Y_G01021;source_id=gene-LOC100335202
haplotype2-0000357	CAT	mRNA	51498793	51562401	.	-	.	ID=Cattle_Y_T01744;Parent=Cattle_Y_G01021;Dbxref=GeneID:100335202,GenBank:NM_001281905.1;Name=NM_001281905.1;gbkey=mRNA;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;transcript_id=Cattle_Y_T01744;gene_id=Cattle_Y_G01021;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001281905.1
haplotype2-0000357	CAT	exon	51498793	51499576	.	-	.	ID=Cattle_Y_E03709;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NM_001281905.1;gbkey=mRNA;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;transcript_id=Cattle_Y_T01744;gene_id=Cattle_Y_G01021;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001281905.1-18
haplotype2-0000357	CAT	exon	51500201	51500358	.	-	.	ID=Cattle_Y_E03710;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NM_001281905.1;gbkey=mRNA;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;transcript_id=Cattle_Y_T01744;gene_id=Cattle_Y_G01021;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001281905.1-17
haplotype2-0000357	CAT	exon	51507695	51507795	.	-	.	ID=Cattle_Y_E03711;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NM_001281905.1;gbkey=mRNA;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;transcript_id=Cattle_Y_T01744;gene_id=Cattle_Y_G01021;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001281905.1-16
haplotype2-0000357	CAT	exon	51512635	51512755	.	-	.	ID=Cattle_Y_E03712;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NM_001281905.1;gbkey=mRNA;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;transcript_id=Cattle_Y_T01744;gene_id=Cattle_Y_G01021;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001281905.1-15
haplotype2-0000357	CAT	exon	51513230	51513826	.	-	.	ID=Cattle_Y_E03713;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NM_001281905.1;gbkey=mRNA;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;transcript_id=Cattle_Y_T01744;gene_id=Cattle_Y_G01021;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001281905.1-14
haplotype2-0000357	CAT	exon	51526549	51526660	.	-	.	ID=Cattle_Y_E03714;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NM_001281905.1;gbkey=mRNA;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;transcript_id=Cattle_Y_T01744;gene_id=Cattle_Y_G01021;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001281905.1-13
haplotype2-0000357	CAT	exon	51527183	51527313	.	-	.	ID=Cattle_Y_E03715;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NM_001281905.1;gbkey=mRNA;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;transcript_id=Cattle_Y_T01744;gene_id=Cattle_Y_G01021;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001281905.1-12
haplotype2-0000357	CAT	exon	51529950	51530139	.	-	.	ID=Cattle_Y_E03716;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NM_001281905.1;gbkey=mRNA;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;transcript_id=Cattle_Y_T01744;gene_id=Cattle_Y_G01021;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001281905.1-11
haplotype2-0000357	CAT	exon	51531154	51531245	.	-	.	ID=Cattle_Y_E03717;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NM_001281905.1;gbkey=mRNA;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;transcript_id=Cattle_Y_T01744;gene_id=Cattle_Y_G01021;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001281905.1-10
haplotype2-0000357	CAT	exon	51532508	51532581	.	-	.	ID=Cattle_Y_E03718;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NM_001281905.1;gbkey=mRNA;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;transcript_id=Cattle_Y_T01744;gene_id=Cattle_Y_G01021;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001281905.1-9
haplotype2-0000357	CAT	exon	51534918	51535034	.	-	.	ID=Cattle_Y_E03719;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NM_001281905.1;gbkey=mRNA;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;transcript_id=Cattle_Y_T01744;gene_id=Cattle_Y_G01021;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001281905.1-8
haplotype2-0000357	CAT	exon	51536985	51537091	.	-	.	ID=Cattle_Y_E03720;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NM_001281905.1;gbkey=mRNA;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;transcript_id=Cattle_Y_T01744;gene_id=Cattle_Y_G01021;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001281905.1-7
haplotype2-0000357	CAT	exon	51542672	51542808	.	-	.	ID=Cattle_Y_E03721;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NM_001281905.1;gbkey=mRNA;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;transcript_id=Cattle_Y_T01744;gene_id=Cattle_Y_G01021;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001281905.1-6
haplotype2-0000357	CAT	exon	51544326	51544433	.	-	.	ID=Cattle_Y_E03722;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NM_001281905.1;gbkey=mRNA;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;transcript_id=Cattle_Y_T01744;gene_id=Cattle_Y_G01021;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001281905.1-5
haplotype2-0000357	CAT	exon	51553472	51553502	.	-	.	ID=Cattle_Y_E03723;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NM_001281905.1;gbkey=mRNA;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;transcript_id=Cattle_Y_T01744;gene_id=Cattle_Y_G01021;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001281905.1-4
haplotype2-0000357	CAT	exon	51553591	51553659	.	-	.	ID=Cattle_Y_E03724;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NM_001281905.1;gbkey=mRNA;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;transcript_id=Cattle_Y_T01744;gene_id=Cattle_Y_G01021;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001281905.1-3
haplotype2-0000357	CAT	exon	51556046	51556246	.	-	.	ID=Cattle_Y_E03725;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NM_001281905.1;gbkey=mRNA;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;transcript_id=Cattle_Y_T01744;gene_id=Cattle_Y_G01021;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001281905.1-2
haplotype2-0000357	CAT	exon	51562176	51562401	.	-	.	ID=Cattle_Y_E03726;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NM_001281905.1;gbkey=mRNA;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;transcript_id=Cattle_Y_T01744;gene_id=Cattle_Y_G01021;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001281905.1-1
haplotype2-0000357	CAT	CDS	51499562	51499576	.	-	0	ID=Cattle_Y_C03296;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NP_001268834.1;Name=NP_001268834.1;gbkey=CDS;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;protein_id=NP_001268834.1;gene_id=Cattle_Y_G01021;transcript_id=Cattle_Y_T01744;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51500201	51500358	.	-	2	ID=Cattle_Y_C03297;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NP_001268834.1;Name=NP_001268834.1;gbkey=CDS;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;protein_id=NP_001268834.1;gene_id=Cattle_Y_G01021;transcript_id=Cattle_Y_T01744;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51507695	51507795	.	-	1	ID=Cattle_Y_C03298;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NP_001268834.1;Name=NP_001268834.1;gbkey=CDS;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;protein_id=NP_001268834.1;gene_id=Cattle_Y_G01021;transcript_id=Cattle_Y_T01744;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51512635	51512755	.	-	2	ID=Cattle_Y_C03299;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NP_001268834.1;Name=NP_001268834.1;gbkey=CDS;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;protein_id=NP_001268834.1;gene_id=Cattle_Y_G01021;transcript_id=Cattle_Y_T01744;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51513230	51513826	.	-	2	ID=Cattle_Y_C03300;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NP_001268834.1;Name=NP_001268834.1;gbkey=CDS;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;protein_id=NP_001268834.1;gene_id=Cattle_Y_G01021;transcript_id=Cattle_Y_T01744;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51526549	51526660	.	-	0	ID=Cattle_Y_C03301;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NP_001268834.1;Name=NP_001268834.1;gbkey=CDS;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;protein_id=NP_001268834.1;gene_id=Cattle_Y_G01021;transcript_id=Cattle_Y_T01744;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51527183	51527313	.	-	2	ID=Cattle_Y_C03302;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NP_001268834.1;Name=NP_001268834.1;gbkey=CDS;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;protein_id=NP_001268834.1;gene_id=Cattle_Y_G01021;transcript_id=Cattle_Y_T01744;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51529950	51530139	.	-	0	ID=Cattle_Y_C03303;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NP_001268834.1;Name=NP_001268834.1;gbkey=CDS;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;protein_id=NP_001268834.1;gene_id=Cattle_Y_G01021;transcript_id=Cattle_Y_T01744;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51531154	51531245	.	-	2	ID=Cattle_Y_C03304;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NP_001268834.1;Name=NP_001268834.1;gbkey=CDS;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;protein_id=NP_001268834.1;gene_id=Cattle_Y_G01021;transcript_id=Cattle_Y_T01744;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51532508	51532581	.	-	1	ID=Cattle_Y_C03305;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NP_001268834.1;Name=NP_001268834.1;gbkey=CDS;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;protein_id=NP_001268834.1;gene_id=Cattle_Y_G01021;transcript_id=Cattle_Y_T01744;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51534918	51535034	.	-	1	ID=Cattle_Y_C03306;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NP_001268834.1;Name=NP_001268834.1;gbkey=CDS;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;protein_id=NP_001268834.1;gene_id=Cattle_Y_G01021;transcript_id=Cattle_Y_T01744;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51536985	51537091	.	-	0	ID=Cattle_Y_C03307;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NP_001268834.1;Name=NP_001268834.1;gbkey=CDS;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;protein_id=NP_001268834.1;gene_id=Cattle_Y_G01021;transcript_id=Cattle_Y_T01744;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51542672	51542808	.	-	2	ID=Cattle_Y_C03308;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NP_001268834.1;Name=NP_001268834.1;gbkey=CDS;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;protein_id=NP_001268834.1;gene_id=Cattle_Y_G01021;transcript_id=Cattle_Y_T01744;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51544326	51544433	.	-	2	ID=Cattle_Y_C03309;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NP_001268834.1;Name=NP_001268834.1;gbkey=CDS;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;protein_id=NP_001268834.1;gene_id=Cattle_Y_G01021;transcript_id=Cattle_Y_T01744;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51553472	51553502	.	-	0	ID=Cattle_Y_C03310;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NP_001268834.1;Name=NP_001268834.1;gbkey=CDS;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;protein_id=NP_001268834.1;gene_id=Cattle_Y_G01021;transcript_id=Cattle_Y_T01744;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51553591	51553659	.	-	0	ID=Cattle_Y_C03311;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NP_001268834.1;Name=NP_001268834.1;gbkey=CDS;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;protein_id=NP_001268834.1;gene_id=Cattle_Y_G01021;transcript_id=Cattle_Y_T01744;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51556046	51556246	.	-	0	ID=Cattle_Y_C03312;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NP_001268834.1;Name=NP_001268834.1;gbkey=CDS;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;protein_id=NP_001268834.1;gene_id=Cattle_Y_G01021;transcript_id=Cattle_Y_T01744;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51562176	51562268	.	-	0	ID=Cattle_Y_C03313;Parent=Cattle_Y_T01744;Dbxref=GeneID:100335202,GenBank:NP_001268834.1;Name=NP_001268834.1;gbkey=CDS;gene=LOC100335202;product=oral-facial-digital syndrome 1 Y-linked;protein_id=NP_001268834.1;gene_id=Cattle_Y_G01021;transcript_id=Cattle_Y_T01744;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	51512212	51512316	.	-	.	ID=Cattle_Y_G01022;Dbxref=GeneID:132344722;Name=LOC132344722;description=U6 spliceosomal RNA;gbkey=Gene;gene=LOC132344722;gene_biotype=snRNA;gene_id=Cattle_Y_G01022;source_id=gene-LOC132344722
haplotype2-0000357	CAT	snRNA	51512212	51512316	.	-	.	ID=Cattle_Y_T01745;Parent=Cattle_Y_G01022;Dbxref=GeneID:132344722,RFAM:RF00026,GenBank:XR_009493664.1;Name=XR_009493664.1;gbkey=ncRNA;gene=LOC132344722;inference=COORDINATES: profile:INFERNAL:1.1.4;product=U6 spliceosomal RNA;transcript_id=Cattle_Y_T01745;gene_id=Cattle_Y_G01022;gene_biotype=snRNA;transcript_biotype=snRNA;source_id=rna-XR_009493664.1
haplotype2-0000357	CAT	exon	51512212	51512316	.	-	.	ID=Cattle_Y_E03727;Parent=Cattle_Y_T01745;Dbxref=GeneID:132344722,RFAM:RF00026,GenBank:XR_009493664.1;gbkey=ncRNA;gene=LOC132344722;inference=COORDINATES: profile:INFERNAL:1.1.4;product=U6 spliceosomal RNA;transcript_id=Cattle_Y_T01745;gene_id=Cattle_Y_G01022;gene_biotype=snRNA;transcript_biotype=snRNA;source_id=exon-XR_009493664.1-1
haplotype2-0000357	CAT	gene	51541142	51541247	.	+	.	ID=Cattle_Y_G01023;Dbxref=GeneID:132344723;Name=LOC132344723;description=U6 spliceosomal RNA;gbkey=Gene;gene=LOC132344723;gene_biotype=snRNA;gene_id=Cattle_Y_G01023;source_id=gene-LOC132344723
haplotype2-0000357	CAT	snRNA	51541142	51541247	.	+	.	ID=Cattle_Y_T01746;Parent=Cattle_Y_G01023;Dbxref=GeneID:132344723,RFAM:RF00026,GenBank:XR_009493668.1;Name=XR_009493668.1;gbkey=ncRNA;gene=LOC132344723;inference=COORDINATES: profile:INFERNAL:1.1.4;product=U6 spliceosomal RNA;transcript_id=Cattle_Y_T01746;gene_id=Cattle_Y_G01023;gene_biotype=snRNA;transcript_biotype=snRNA;source_id=rna-XR_009493668.1
haplotype2-0000357	CAT	exon	51541142	51541247	.	+	.	ID=Cattle_Y_E03728;Parent=Cattle_Y_T01746;Dbxref=GeneID:132344723,RFAM:RF00026,GenBank:XR_009493668.1;gbkey=ncRNA;gene=LOC132344723;inference=COORDINATES: profile:INFERNAL:1.1.4;product=U6 spliceosomal RNA;transcript_id=Cattle_Y_T01746;gene_id=Cattle_Y_G01023;gene_biotype=snRNA;transcript_biotype=snRNA;source_id=exon-XR_009493668.1-1
haplotype2-0000357	CAT	gene	51598339	51604569	.	-	.	ID=Cattle_Y_G01024;Dbxref=GeneID:132344423;Name=LOC132344423;description=amelogenin%2C Y isoform-like;gbkey=Gene;gene=LOC132344423;gene_biotype=protein_coding;gene_id=Cattle_Y_G01024;source_id=gene-LOC132344423
haplotype2-0000357	CAT	mRNA	51598339	51604569	.	-	.	ID=Cattle_Y_T01747;Parent=Cattle_Y_G01024;Dbxref=GeneID:132344423,GenBank:XM_059884004.1;Name=XM_059884004.1;gbkey=mRNA;gene=LOC132344423;model_evidence=Supporting evidence includes similarity to: 1 mRNA%2C 10 Proteins;product=amelogenin%2C Y isoform-like;transcript_id=Cattle_Y_T01747;gene_id=Cattle_Y_G01024;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884004.1
haplotype2-0000357	CAT	exon	51598339	51598344	.	-	.	ID=Cattle_Y_E03729;Parent=Cattle_Y_T01747;Dbxref=GeneID:132344423,GenBank:XM_059884004.1;gbkey=mRNA;gene=LOC132344423;product=amelogenin, Y isoform-like;transcript_id=Cattle_Y_T01747;gene_id=Cattle_Y_G01024;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884004.1-5
haplotype2-0000357	CAT	exon	51599883	51600308	.	-	.	ID=Cattle_Y_E03730;Parent=Cattle_Y_T01747;Dbxref=GeneID:132344423,GenBank:XM_059884004.1;gbkey=mRNA;gene=LOC132344423;product=amelogenin, Y isoform-like;transcript_id=Cattle_Y_T01747;gene_id=Cattle_Y_G01024;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884004.1-4
haplotype2-0000357	CAT	exon	51601046	51601090	.	-	.	ID=Cattle_Y_E03731;Parent=Cattle_Y_T01747;Dbxref=GeneID:132344423,GenBank:XM_059884004.1;gbkey=mRNA;gene=LOC132344423;product=amelogenin, Y isoform-like;transcript_id=Cattle_Y_T01747;gene_id=Cattle_Y_G01024;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884004.1-3
haplotype2-0000357	CAT	exon	51602605	51602652	.	-	.	ID=Cattle_Y_E03732;Parent=Cattle_Y_T01747;Dbxref=GeneID:132344423,GenBank:XM_059884004.1;gbkey=mRNA;gene=LOC132344423;product=amelogenin, Y isoform-like;transcript_id=Cattle_Y_T01747;gene_id=Cattle_Y_G01024;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884004.1-2
haplotype2-0000357	CAT	exon	51604516	51604569	.	-	.	ID=Cattle_Y_E03733;Parent=Cattle_Y_T01747;Dbxref=GeneID:132344423,GenBank:XM_059884004.1;gbkey=mRNA;gene=LOC132344423;product=amelogenin, Y isoform-like;transcript_id=Cattle_Y_T01747;gene_id=Cattle_Y_G01024;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884004.1-1
haplotype2-0000357	CAT	CDS	51598339	51598344	.	-	0	ID=Cattle_Y_C03314;Parent=Cattle_Y_T01747;Dbxref=GeneID:132344423,GenBank:XP_059739987.1;Name=XP_059739987.1;gbkey=CDS;gene=LOC132344423;product=amelogenin, Y isoform-like;protein_id=XP_059739987.1;gene_id=Cattle_Y_G01024;transcript_id=Cattle_Y_T01747;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51599883	51600308	.	-	0	ID=Cattle_Y_C03315;Parent=Cattle_Y_T01747;Dbxref=GeneID:132344423,GenBank:XP_059739987.1;Name=XP_059739987.1;gbkey=CDS;gene=LOC132344423;product=amelogenin, Y isoform-like;protein_id=XP_059739987.1;gene_id=Cattle_Y_G01024;transcript_id=Cattle_Y_T01747;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51601046	51601090	.	-	0	ID=Cattle_Y_C03316;Parent=Cattle_Y_T01747;Dbxref=GeneID:132344423,GenBank:XP_059739987.1;Name=XP_059739987.1;gbkey=CDS;gene=LOC132344423;product=amelogenin, Y isoform-like;protein_id=XP_059739987.1;gene_id=Cattle_Y_G01024;transcript_id=Cattle_Y_T01747;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51602605	51602652	.	-	0	ID=Cattle_Y_C03317;Parent=Cattle_Y_T01747;Dbxref=GeneID:132344423,GenBank:XP_059739987.1;Name=XP_059739987.1;gbkey=CDS;gene=LOC132344423;product=amelogenin, Y isoform-like;protein_id=XP_059739987.1;gene_id=Cattle_Y_G01024;transcript_id=Cattle_Y_T01747;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51604516	51604569	.	-	0	ID=Cattle_Y_C03318;Parent=Cattle_Y_T01747;Dbxref=GeneID:132344423,GenBank:XP_059739987.1;Name=XP_059739987.1;gbkey=CDS;gene=LOC132344423;product=amelogenin, Y isoform-like;protein_id=XP_059739987.1;gene_id=Cattle_Y_G01024;transcript_id=Cattle_Y_T01747;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	51641360	51657895	.	-	.	ID=Cattle_Y_G01025;Dbxref=GeneID:100271756;Name=EIF1AY;description=eukaryotic translation initiation factor 1A%2C Y-linked;gbkey=Gene;gene=EIF1AY;gene_biotype=protein_coding;gene_id=Cattle_Y_G01025;source_id=gene-EIF1AY
haplotype2-0000357	CAT	mRNA	51644279	51657732	.	-	.	ID=Cattle_Y_T01748;Parent=Cattle_Y_G01025;Dbxref=GeneID:100271756,GenBank:NM_001145757.1;Name=NM_001145757.1;gbkey=mRNA;gene=EIF1AY;product=eukaryotic translation initiation factor 1A%2C Y-linked;transcript_id=Cattle_Y_T01748;gene_id=Cattle_Y_G01025;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001145757.1
haplotype2-0000357	CAT	exon	51644279	51644373	.	-	.	ID=Cattle_Y_E03734;Parent=Cattle_Y_T01748;Dbxref=GeneID:100271756,GenBank:NM_001145757.1;gbkey=mRNA;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked;transcript_id=Cattle_Y_T01748;gene_id=Cattle_Y_G01025;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145757.1-6
haplotype2-0000357	CAT	exon	51645268	51645349	.	-	.	ID=Cattle_Y_E03735;Parent=Cattle_Y_T01748;Dbxref=GeneID:100271756,GenBank:NM_001145757.1;gbkey=mRNA;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked;transcript_id=Cattle_Y_T01748;gene_id=Cattle_Y_G01025;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145757.1-5
haplotype2-0000357	CAT	exon	51649223	51649273	.	-	.	ID=Cattle_Y_E03736;Parent=Cattle_Y_T01748;Dbxref=GeneID:100271756,GenBank:NM_001145757.1;gbkey=mRNA;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked;transcript_id=Cattle_Y_T01748;gene_id=Cattle_Y_G01025;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145757.1-4
haplotype2-0000357	CAT	exon	51650351	51650454	.	-	.	ID=Cattle_Y_E03737;Parent=Cattle_Y_T01748;Dbxref=GeneID:100271756,GenBank:NM_001145757.1;gbkey=mRNA;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked;transcript_id=Cattle_Y_T01748;gene_id=Cattle_Y_G01025;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145757.1-3
haplotype2-0000357	CAT	exon	51655815	51655898	.	-	.	ID=Cattle_Y_E03738;Parent=Cattle_Y_T01748;Dbxref=GeneID:100271756,GenBank:NM_001145757.1;gbkey=mRNA;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked;transcript_id=Cattle_Y_T01748;gene_id=Cattle_Y_G01025;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145757.1-2
haplotype2-0000357	CAT	exon	51657699	51657732	.	-	.	ID=Cattle_Y_E03739;Parent=Cattle_Y_T01748;Dbxref=GeneID:100271756,GenBank:NM_001145757.1;gbkey=mRNA;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked;transcript_id=Cattle_Y_T01748;gene_id=Cattle_Y_G01025;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145757.1-1
haplotype2-0000357	CAT	CDS	51644279	51644373	.	-	2	ID=Cattle_Y_C03319;Parent=Cattle_Y_T01748;Dbxref=GeneID:100271756,GenBank:NP_001139229.1;Name=NP_001139229.1;gbkey=CDS;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked;protein_id=NP_001139229.1;gene_id=Cattle_Y_G01025;transcript_id=Cattle_Y_T01748;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51645268	51645349	.	-	0	ID=Cattle_Y_C03320;Parent=Cattle_Y_T01748;Dbxref=GeneID:100271756,GenBank:NP_001139229.1;Name=NP_001139229.1;gbkey=CDS;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked;protein_id=NP_001139229.1;gene_id=Cattle_Y_G01025;transcript_id=Cattle_Y_T01748;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51649223	51649273	.	-	0	ID=Cattle_Y_C03321;Parent=Cattle_Y_T01748;Dbxref=GeneID:100271756,GenBank:NP_001139229.1;Name=NP_001139229.1;gbkey=CDS;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked;protein_id=NP_001139229.1;gene_id=Cattle_Y_G01025;transcript_id=Cattle_Y_T01748;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51650351	51650454	.	-	2	ID=Cattle_Y_C03322;Parent=Cattle_Y_T01748;Dbxref=GeneID:100271756,GenBank:NP_001139229.1;Name=NP_001139229.1;gbkey=CDS;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked;protein_id=NP_001139229.1;gene_id=Cattle_Y_G01025;transcript_id=Cattle_Y_T01748;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51655815	51655898	.	-	2	ID=Cattle_Y_C03323;Parent=Cattle_Y_T01748;Dbxref=GeneID:100271756,GenBank:NP_001139229.1;Name=NP_001139229.1;gbkey=CDS;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked;protein_id=NP_001139229.1;gene_id=Cattle_Y_G01025;transcript_id=Cattle_Y_T01748;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51657699	51657714	.	-	0	ID=Cattle_Y_C03324;Parent=Cattle_Y_T01748;Dbxref=GeneID:100271756,GenBank:NP_001139229.1;Name=NP_001139229.1;gbkey=CDS;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked;protein_id=NP_001139229.1;gene_id=Cattle_Y_G01025;transcript_id=Cattle_Y_T01748;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	51641360	51657885	.	-	.	ID=Cattle_Y_T01749;Parent=Cattle_Y_G01025;Dbxref=GeneID:100271756,GenBank:XM_059883966.1;Name=XM_059883966.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=EIF1AY;model_evidence=Supporting evidence includes similarity to: 3 mRNAs%2C 39 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=eukaryotic translation initiation factor 1A%2C Y-linked%2C transcript variant X1;transcript_id=Cattle_Y_T01749;gene_id=Cattle_Y_G01025;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883966.1
haplotype2-0000357	CAT	exon	51641360	51641517	.	-	.	ID=Cattle_Y_E03740;Parent=Cattle_Y_T01749;Dbxref=GeneID:100271756,GenBank:XM_059883966.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01749;gene_id=Cattle_Y_G01025;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883966.1-7
haplotype2-0000357	CAT	exon	51644265	51644373	.	-	.	ID=Cattle_Y_E03741;Parent=Cattle_Y_T01749;Dbxref=GeneID:100271756,GenBank:XM_059883966.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01749;gene_id=Cattle_Y_G01025;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883966.1-6
haplotype2-0000357	CAT	exon	51645268	51645349	.	-	.	ID=Cattle_Y_E03742;Parent=Cattle_Y_T01749;Dbxref=GeneID:100271756,GenBank:XM_059883966.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01749;gene_id=Cattle_Y_G01025;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883966.1-5
haplotype2-0000357	CAT	exon	51649223	51649273	.	-	.	ID=Cattle_Y_E03743;Parent=Cattle_Y_T01749;Dbxref=GeneID:100271756,GenBank:XM_059883966.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01749;gene_id=Cattle_Y_G01025;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883966.1-4
haplotype2-0000357	CAT	exon	51650351	51650454	.	-	.	ID=Cattle_Y_E03744;Parent=Cattle_Y_T01749;Dbxref=GeneID:100271756,GenBank:XM_059883966.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01749;gene_id=Cattle_Y_G01025;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883966.1-3
haplotype2-0000357	CAT	exon	51655815	51655898	.	-	.	ID=Cattle_Y_E03745;Parent=Cattle_Y_T01749;Dbxref=GeneID:100271756,GenBank:XM_059883966.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01749;gene_id=Cattle_Y_G01025;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883966.1-2
haplotype2-0000357	CAT	exon	51657699	51657885	.	-	.	ID=Cattle_Y_E03746;Parent=Cattle_Y_T01749;Dbxref=GeneID:100271756,GenBank:XM_059883966.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked, transcript variant X1;transcript_id=Cattle_Y_T01749;gene_id=Cattle_Y_G01025;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883966.1-1
haplotype2-0000357	CAT	CDS	51644279	51644373	.	-	2	ID=Cattle_Y_C03325;Parent=Cattle_Y_T01749;Dbxref=GeneID:100271756,GenBank:XP_059739949.1;Name=XP_059739949.1;gbkey=CDS;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked isoform X1;protein_id=XP_059739949.1;gene_id=Cattle_Y_G01025;transcript_id=Cattle_Y_T01749;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51645268	51645349	.	-	0	ID=Cattle_Y_C03326;Parent=Cattle_Y_T01749;Dbxref=GeneID:100271756,GenBank:XP_059739949.1;Name=XP_059739949.1;gbkey=CDS;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked isoform X1;protein_id=XP_059739949.1;gene_id=Cattle_Y_G01025;transcript_id=Cattle_Y_T01749;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51649223	51649273	.	-	0	ID=Cattle_Y_C03327;Parent=Cattle_Y_T01749;Dbxref=GeneID:100271756,GenBank:XP_059739949.1;Name=XP_059739949.1;gbkey=CDS;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked isoform X1;protein_id=XP_059739949.1;gene_id=Cattle_Y_G01025;transcript_id=Cattle_Y_T01749;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51650351	51650454	.	-	2	ID=Cattle_Y_C03328;Parent=Cattle_Y_T01749;Dbxref=GeneID:100271756,GenBank:XP_059739949.1;Name=XP_059739949.1;gbkey=CDS;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked isoform X1;protein_id=XP_059739949.1;gene_id=Cattle_Y_G01025;transcript_id=Cattle_Y_T01749;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51655815	51655898	.	-	2	ID=Cattle_Y_C03329;Parent=Cattle_Y_T01749;Dbxref=GeneID:100271756,GenBank:XP_059739949.1;Name=XP_059739949.1;gbkey=CDS;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked isoform X1;protein_id=XP_059739949.1;gene_id=Cattle_Y_G01025;transcript_id=Cattle_Y_T01749;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51657699	51657714	.	-	0	ID=Cattle_Y_C03330;Parent=Cattle_Y_T01749;Dbxref=GeneID:100271756,GenBank:XP_059739949.1;Name=XP_059739949.1;gbkey=CDS;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked isoform X1;protein_id=XP_059739949.1;gene_id=Cattle_Y_G01025;transcript_id=Cattle_Y_T01749;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	51641360	51657895	.	-	.	ID=Cattle_Y_T01750;Parent=Cattle_Y_G01025;Dbxref=GeneID:100271756,GenBank:XM_059883967.1;Name=XM_059883967.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=EIF1AY;model_evidence=Supporting evidence includes similarity to: 2 mRNAs%2C 5 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=eukaryotic translation initiation factor 1A%2C Y-linked%2C transcript variant X2;transcript_id=Cattle_Y_T01750;gene_id=Cattle_Y_G01025;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883967.1
haplotype2-0000357	CAT	exon	51641360	51641517	.	-	.	ID=Cattle_Y_E03747;Parent=Cattle_Y_T01750;Dbxref=GeneID:100271756,GenBank:XM_059883967.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked, transcript variant X2;transcript_id=Cattle_Y_T01750;gene_id=Cattle_Y_G01025;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883967.1-7
haplotype2-0000357	CAT	exon	51644305	51644373	.	-	.	ID=Cattle_Y_E03748;Parent=Cattle_Y_T01750;Dbxref=GeneID:100271756,GenBank:XM_059883967.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked, transcript variant X2;transcript_id=Cattle_Y_T01750;gene_id=Cattle_Y_G01025;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883967.1-6
haplotype2-0000357	CAT	exon	51645268	51645349	.	-	.	ID=Cattle_Y_E03749;Parent=Cattle_Y_T01750;Dbxref=GeneID:100271756,GenBank:XM_059883967.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked, transcript variant X2;transcript_id=Cattle_Y_T01750;gene_id=Cattle_Y_G01025;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883967.1-5
haplotype2-0000357	CAT	exon	51649223	51649273	.	-	.	ID=Cattle_Y_E03750;Parent=Cattle_Y_T01750;Dbxref=GeneID:100271756,GenBank:XM_059883967.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked, transcript variant X2;transcript_id=Cattle_Y_T01750;gene_id=Cattle_Y_G01025;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883967.1-4
haplotype2-0000357	CAT	exon	51650351	51650454	.	-	.	ID=Cattle_Y_E03751;Parent=Cattle_Y_T01750;Dbxref=GeneID:100271756,GenBank:XM_059883967.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked, transcript variant X2;transcript_id=Cattle_Y_T01750;gene_id=Cattle_Y_G01025;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883967.1-3
haplotype2-0000357	CAT	exon	51655815	51655898	.	-	.	ID=Cattle_Y_E03752;Parent=Cattle_Y_T01750;Dbxref=GeneID:100271756,GenBank:XM_059883967.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked, transcript variant X2;transcript_id=Cattle_Y_T01750;gene_id=Cattle_Y_G01025;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883967.1-2
haplotype2-0000357	CAT	exon	51657699	51657895	.	-	.	ID=Cattle_Y_E03753;Parent=Cattle_Y_T01750;Dbxref=GeneID:100271756,GenBank:XM_059883967.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked, transcript variant X2;transcript_id=Cattle_Y_T01750;gene_id=Cattle_Y_G01025;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883967.1-1
haplotype2-0000357	CAT	CDS	51641507	51641517	.	-	2	ID=Cattle_Y_C03331;Parent=Cattle_Y_T01750;Dbxref=GeneID:100271756,GenBank:XP_059739950.1;Name=XP_059739950.1;gbkey=CDS;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked isoform X2;protein_id=XP_059739950.1;gene_id=Cattle_Y_G01025;transcript_id=Cattle_Y_T01750;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51644305	51644373	.	-	2	ID=Cattle_Y_C03332;Parent=Cattle_Y_T01750;Dbxref=GeneID:100271756,GenBank:XP_059739950.1;Name=XP_059739950.1;gbkey=CDS;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked isoform X2;protein_id=XP_059739950.1;gene_id=Cattle_Y_G01025;transcript_id=Cattle_Y_T01750;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51645268	51645349	.	-	0	ID=Cattle_Y_C03333;Parent=Cattle_Y_T01750;Dbxref=GeneID:100271756,GenBank:XP_059739950.1;Name=XP_059739950.1;gbkey=CDS;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked isoform X2;protein_id=XP_059739950.1;gene_id=Cattle_Y_G01025;transcript_id=Cattle_Y_T01750;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51649223	51649273	.	-	0	ID=Cattle_Y_C03334;Parent=Cattle_Y_T01750;Dbxref=GeneID:100271756,GenBank:XP_059739950.1;Name=XP_059739950.1;gbkey=CDS;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked isoform X2;protein_id=XP_059739950.1;gene_id=Cattle_Y_G01025;transcript_id=Cattle_Y_T01750;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51650351	51650454	.	-	2	ID=Cattle_Y_C03335;Parent=Cattle_Y_T01750;Dbxref=GeneID:100271756,GenBank:XP_059739950.1;Name=XP_059739950.1;gbkey=CDS;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked isoform X2;protein_id=XP_059739950.1;gene_id=Cattle_Y_G01025;transcript_id=Cattle_Y_T01750;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51655815	51655898	.	-	2	ID=Cattle_Y_C03336;Parent=Cattle_Y_T01750;Dbxref=GeneID:100271756,GenBank:XP_059739950.1;Name=XP_059739950.1;gbkey=CDS;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked isoform X2;protein_id=XP_059739950.1;gene_id=Cattle_Y_G01025;transcript_id=Cattle_Y_T01750;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51657699	51657714	.	-	0	ID=Cattle_Y_C03337;Parent=Cattle_Y_T01750;Dbxref=GeneID:100271756,GenBank:XP_059739950.1;Name=XP_059739950.1;gbkey=CDS;gene=EIF1AY;product=eukaryotic translation initiation factor 1A, Y-linked isoform X2;protein_id=XP_059739950.1;gene_id=Cattle_Y_G01025;transcript_id=Cattle_Y_T01750;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	51717480	51747105	.	+	.	ID=Cattle_Y_G01026;Dbxref=BGD:BT24688,GeneID:613505,VGNC:VGNC:55027;Name=GPR143;description=G protein-coupled receptor 143;gbkey=Gene;gene=GPR143;gene_biotype=protein_coding;gene_id=Cattle_Y_G01026;source_id=gene-GPR143-2
haplotype2-0000357	CAT	mRNA	51717480	51747105	.	+	.	ID=Cattle_Y_T01751;Parent=Cattle_Y_G01026;Dbxref=GeneID:613505,GenBank:XM_059884059.1,BGD:BT24688,VGNC:VGNC:55027;Name=XM_059884059.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GPR143;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 2 Proteins%2C and 92%25 coverage of the annotated genomic feature by RNAseq alignments;product=G protein-coupled receptor 143;transcript_id=Cattle_Y_T01751;gene_id=Cattle_Y_G01026;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884059.1
haplotype2-0000357	CAT	exon	51717480	51717791	.	+	.	ID=Cattle_Y_E03754;Parent=Cattle_Y_T01751;Dbxref=GeneID:613505,GenBank:XM_059884059.1,BGD:BT24688,VGNC:VGNC:55027;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GPR143;product=G protein-coupled receptor 143;transcript_id=Cattle_Y_T01751;gene_id=Cattle_Y_G01026;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884059.1-1
haplotype2-0000357	CAT	exon	51725799	51725908	.	+	.	ID=Cattle_Y_E03755;Parent=Cattle_Y_T01751;Dbxref=GeneID:613505,GenBank:XM_059884059.1,BGD:BT24688,VGNC:VGNC:55027;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GPR143;product=G protein-coupled receptor 143;transcript_id=Cattle_Y_T01751;gene_id=Cattle_Y_G01026;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884059.1-1
haplotype2-0000357	CAT	exon	51726666	51726760	.	+	.	ID=Cattle_Y_E03756;Parent=Cattle_Y_T01751;Dbxref=GeneID:613505,GenBank:XM_059884059.1,BGD:BT24688,VGNC:VGNC:55027;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GPR143;product=G protein-coupled receptor 143;transcript_id=Cattle_Y_T01751;gene_id=Cattle_Y_G01026;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884059.1-1
haplotype2-0000357	CAT	exon	51729561	51729653	.	+	.	ID=Cattle_Y_E03757;Parent=Cattle_Y_T01751;Dbxref=GeneID:613505,GenBank:XM_059884059.1,BGD:BT24688,VGNC:VGNC:55027;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GPR143;product=G protein-coupled receptor 143;transcript_id=Cattle_Y_T01751;gene_id=Cattle_Y_G01026;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884059.1-1
haplotype2-0000357	CAT	exon	51733233	51733342	.	+	.	ID=Cattle_Y_E03758;Parent=Cattle_Y_T01751;Dbxref=GeneID:613505,GenBank:XM_059884059.1,BGD:BT24688,VGNC:VGNC:55027;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GPR143;product=G protein-coupled receptor 143;transcript_id=Cattle_Y_T01751;gene_id=Cattle_Y_G01026;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884059.1-1
haplotype2-0000357	CAT	exon	51735714	51735822	.	+	.	ID=Cattle_Y_E03759;Parent=Cattle_Y_T01751;Dbxref=GeneID:613505,GenBank:XM_059884059.1,BGD:BT24688,VGNC:VGNC:55027;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GPR143;product=G protein-coupled receptor 143;transcript_id=Cattle_Y_T01751;gene_id=Cattle_Y_G01026;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884059.1-1
haplotype2-0000357	CAT	exon	51737516	51737633	.	+	.	ID=Cattle_Y_E03760;Parent=Cattle_Y_T01751;Dbxref=GeneID:613505,GenBank:XM_059884059.1,BGD:BT24688,VGNC:VGNC:55027;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GPR143;product=G protein-coupled receptor 143;transcript_id=Cattle_Y_T01751;gene_id=Cattle_Y_G01026;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884059.1-1
haplotype2-0000357	CAT	exon	51738889	51739132	.	+	.	ID=Cattle_Y_E03761;Parent=Cattle_Y_T01751;Dbxref=GeneID:613505,GenBank:XM_059884059.1,BGD:BT24688,VGNC:VGNC:55027;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GPR143;product=G protein-coupled receptor 143;transcript_id=Cattle_Y_T01751;gene_id=Cattle_Y_G01026;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884059.1-1
haplotype2-0000357	CAT	exon	51746658	51747105	.	+	.	ID=Cattle_Y_E03762;Parent=Cattle_Y_T01751;Dbxref=GeneID:613505,GenBank:XM_059884059.1,BGD:BT24688,VGNC:VGNC:55027;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GPR143;product=G protein-coupled receptor 143;transcript_id=Cattle_Y_T01751;gene_id=Cattle_Y_G01026;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884059.1-9
haplotype2-0000357	CAT	CDS	51717524	51717791	.	+	0	ID=Cattle_Y_C03338;Parent=Cattle_Y_T01751;gene_id=Cattle_Y_G01026;transcript_id=Cattle_Y_T01751;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51725799	51725908	.	+	2	ID=Cattle_Y_C03339;Parent=Cattle_Y_T01751;gene_id=Cattle_Y_G01026;transcript_id=Cattle_Y_T01751;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51726666	51726760	.	+	0	ID=Cattle_Y_C03340;Parent=Cattle_Y_T01751;gene_id=Cattle_Y_G01026;transcript_id=Cattle_Y_T01751;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51729561	51729653	.	+	1	ID=Cattle_Y_C03341;Parent=Cattle_Y_T01751;gene_id=Cattle_Y_G01026;transcript_id=Cattle_Y_T01751;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51733233	51733342	.	+	1	ID=Cattle_Y_C03342;Parent=Cattle_Y_T01751;gene_id=Cattle_Y_G01026;transcript_id=Cattle_Y_T01751;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51735714	51735822	.	+	2	ID=Cattle_Y_C03343;Parent=Cattle_Y_T01751;gene_id=Cattle_Y_G01026;transcript_id=Cattle_Y_T01751;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51737516	51737633	.	+	1	ID=Cattle_Y_C03344;Parent=Cattle_Y_T01751;gene_id=Cattle_Y_G01026;transcript_id=Cattle_Y_T01751;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51738889	51739132	.	+	0	ID=Cattle_Y_C03345;Parent=Cattle_Y_T01751;gene_id=Cattle_Y_G01026;transcript_id=Cattle_Y_T01751;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51746658	51746752	.	+	2	ID=Cattle_Y_C03346;Parent=Cattle_Y_T01751;gene_id=Cattle_Y_G01026;transcript_id=Cattle_Y_T01751;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	51753909	51999340	.	-	.	ID=Cattle_Y_G01027;Dbxref=BGD:BT26461,GeneID:515972;Name=TBL1X;description=transducin beta like 1 X-linked;gbkey=Gene;gene=TBL1X;gene_biotype=protein_coding;gene_id=Cattle_Y_G01027;source_id=gene-TBL1X-2
haplotype2-0000357	CAT	mRNA	51754508	51813066	.	-	.	ID=Cattle_Y_T01752;Parent=Cattle_Y_G01027;Dbxref=GeneID:515972,GenBank:NM_001145232.1,BGD:BT26461;Name=NM_001145232.1;Note=The RefSeq transcript has 2 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TBL1X;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001145232.1;product=transducin beta like 1 X-linked;transcript_id=Cattle_Y_T01752;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001145232.1-2
haplotype2-0000357	CAT	exon	51754508	51754534	.	-	.	ID=Cattle_Y_E03763;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NM_001145232.1,BGD:BT26461;Note=The RefSeq transcript has 2 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TBL1X;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001145232.1;product=transducin beta like 1 X-linked;transcript_id=Cattle_Y_T01752;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145232.1-2-14
haplotype2-0000357	CAT	exon	51755487	51755588	.	-	.	ID=Cattle_Y_E03764;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NM_001145232.1,BGD:BT26461;Note=The RefSeq transcript has 2 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TBL1X;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001145232.1;product=transducin beta like 1 X-linked;transcript_id=Cattle_Y_T01752;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145232.1-2-13
haplotype2-0000357	CAT	exon	51757220	51757385	.	-	.	ID=Cattle_Y_E03765;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NM_001145232.1,BGD:BT26461;Note=The RefSeq transcript has 2 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TBL1X;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001145232.1;product=transducin beta like 1 X-linked;transcript_id=Cattle_Y_T01752;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145232.1-2-12
haplotype2-0000357	CAT	exon	51760161	51760288	.	-	.	ID=Cattle_Y_E03766;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NM_001145232.1,BGD:BT26461;Note=The RefSeq transcript has 2 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TBL1X;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001145232.1;product=transducin beta like 1 X-linked;transcript_id=Cattle_Y_T01752;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145232.1-2-11
haplotype2-0000357	CAT	exon	51760799	51760873	.	-	.	ID=Cattle_Y_E03767;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NM_001145232.1,BGD:BT26461;Note=The RefSeq transcript has 2 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TBL1X;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001145232.1;product=transducin beta like 1 X-linked;transcript_id=Cattle_Y_T01752;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145232.1-2-10
haplotype2-0000357	CAT	exon	51763526	51763647	.	-	.	ID=Cattle_Y_E03768;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NM_001145232.1,BGD:BT26461;Note=The RefSeq transcript has 2 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TBL1X;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001145232.1;product=transducin beta like 1 X-linked;transcript_id=Cattle_Y_T01752;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145232.1-2-9
haplotype2-0000357	CAT	exon	51769154	51769214	.	-	.	ID=Cattle_Y_E03769;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NM_001145232.1,BGD:BT26461;Note=The RefSeq transcript has 2 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TBL1X;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001145232.1;product=transducin beta like 1 X-linked;transcript_id=Cattle_Y_T01752;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145232.1-2-8
haplotype2-0000357	CAT	exon	51771600	51771697	.	-	.	ID=Cattle_Y_E03770;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NM_001145232.1,BGD:BT26461;Note=The RefSeq transcript has 2 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TBL1X;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001145232.1;product=transducin beta like 1 X-linked;transcript_id=Cattle_Y_T01752;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145232.1-2-7
haplotype2-0000357	CAT	exon	51771831	51771894	.	-	.	ID=Cattle_Y_E03771;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NM_001145232.1,BGD:BT26461;Note=The RefSeq transcript has 2 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TBL1X;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001145232.1;product=transducin beta like 1 X-linked;transcript_id=Cattle_Y_T01752;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145232.1-2-6
haplotype2-0000357	CAT	exon	51773394	51773535	.	-	.	ID=Cattle_Y_E03772;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NM_001145232.1,BGD:BT26461;Note=The RefSeq transcript has 2 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TBL1X;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001145232.1;product=transducin beta like 1 X-linked;transcript_id=Cattle_Y_T01752;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145232.1-2-5
haplotype2-0000357	CAT	exon	51774181	51774313	.	-	.	ID=Cattle_Y_E03773;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NM_001145232.1,BGD:BT26461;Note=The RefSeq transcript has 2 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TBL1X;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001145232.1;product=transducin beta like 1 X-linked;transcript_id=Cattle_Y_T01752;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145232.1-2-4
haplotype2-0000357	CAT	exon	51777923	51778187	.	-	.	ID=Cattle_Y_E03774;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NM_001145232.1,BGD:BT26461;Note=The RefSeq transcript has 2 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TBL1X;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001145232.1;product=transducin beta like 1 X-linked;transcript_id=Cattle_Y_T01752;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145232.1-2-3
haplotype2-0000357	CAT	exon	51783241	51783386	.	-	.	ID=Cattle_Y_E03775;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NM_001145232.1,BGD:BT26461;Note=The RefSeq transcript has 2 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TBL1X;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001145232.1;product=transducin beta like 1 X-linked;transcript_id=Cattle_Y_T01752;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145232.1-2-2
haplotype2-0000357	CAT	exon	51813009	51813066	.	-	.	ID=Cattle_Y_E03776;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NM_001145232.1,BGD:BT26461;Note=The RefSeq transcript has 2 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=TBL1X;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001145232.1;product=transducin beta like 1 X-linked;transcript_id=Cattle_Y_T01752;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001145232.1-2-1
haplotype2-0000357	CAT	CDS	51754508	51754534	.	-	0	ID=Cattle_Y_C03347;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NP_001138704.1,BGD:BT26461;Name=NP_001138704.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X;protein_id=NP_001138704.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01752;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51755487	51755588	.	-	0	ID=Cattle_Y_C03348;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NP_001138704.1,BGD:BT26461;Name=NP_001138704.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X;protein_id=NP_001138704.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01752;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51757220	51757385	.	-	1	ID=Cattle_Y_C03349;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NP_001138704.1,BGD:BT26461;Name=NP_001138704.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X;protein_id=NP_001138704.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01752;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51760161	51760288	.	-	0	ID=Cattle_Y_C03350;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NP_001138704.1,BGD:BT26461;Name=NP_001138704.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X;protein_id=NP_001138704.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01752;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51760799	51760873	.	-	0	ID=Cattle_Y_C03351;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NP_001138704.1,BGD:BT26461;Name=NP_001138704.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X;protein_id=NP_001138704.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01752;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51763526	51763647	.	-	2	ID=Cattle_Y_C03352;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NP_001138704.1,BGD:BT26461;Name=NP_001138704.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X;protein_id=NP_001138704.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01752;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51769154	51769214	.	-	0	ID=Cattle_Y_C03353;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NP_001138704.1,BGD:BT26461;Name=NP_001138704.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X;protein_id=NP_001138704.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01752;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51771600	51771697	.	-	2	ID=Cattle_Y_C03354;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NP_001138704.1,BGD:BT26461;Name=NP_001138704.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X;protein_id=NP_001138704.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01752;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51771831	51771894	.	-	0	ID=Cattle_Y_C03355;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NP_001138704.1,BGD:BT26461;Name=NP_001138704.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X;protein_id=NP_001138704.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01752;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51773394	51773535	.	-	1	ID=Cattle_Y_C03356;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NP_001138704.1,BGD:BT26461;Name=NP_001138704.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X;protein_id=NP_001138704.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01752;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51774181	51774313	.	-	2	ID=Cattle_Y_C03357;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NP_001138704.1,BGD:BT26461;Name=NP_001138704.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X;protein_id=NP_001138704.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01752;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51777923	51778187	.	-	0	ID=Cattle_Y_C03358;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NP_001138704.1,BGD:BT26461;Name=NP_001138704.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X;protein_id=NP_001138704.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01752;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51783241	51783386	.	-	2	ID=Cattle_Y_C03359;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NP_001138704.1,BGD:BT26461;Name=NP_001138704.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X;protein_id=NP_001138704.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01752;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51813009	51813066	.	-	0	ID=Cattle_Y_C03360;Parent=Cattle_Y_T01752;Dbxref=GeneID:515972,GenBank:NP_001138704.1,BGD:BT26461;Name=NP_001138704.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X;protein_id=NP_001138704.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01752;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	51753909	51999340	.	-	.	ID=Cattle_Y_T01753;Parent=Cattle_Y_G01027;Dbxref=GeneID:515972,GenBank:XM_024987972.2,BGD:BT26461;Name=XM_024987972.2;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;model_evidence=Supporting evidence includes similarity to: 1 mRNA%2C 37 ESTs%2C 15 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 57 samples with support for all annotated introns;product=transducin beta like 1 X-linked%2C transcript variant X1;transcript_id=Cattle_Y_T01753;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_024987972.2
haplotype2-0000357	CAT	exon	51753909	51754534	.	-	.	ID=Cattle_Y_E03777;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XM_024987972.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X1;transcript_id=Cattle_Y_T01753;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987972.2-18
haplotype2-0000357	CAT	exon	51755487	51755588	.	-	.	ID=Cattle_Y_E03778;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XM_024987972.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X1;transcript_id=Cattle_Y_T01753;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987972.2-17
haplotype2-0000357	CAT	exon	51757220	51757385	.	-	.	ID=Cattle_Y_E03779;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XM_024987972.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X1;transcript_id=Cattle_Y_T01753;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987972.2-16
haplotype2-0000357	CAT	exon	51760161	51760288	.	-	.	ID=Cattle_Y_E03780;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XM_024987972.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X1;transcript_id=Cattle_Y_T01753;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987972.2-15
haplotype2-0000357	CAT	exon	51760799	51760873	.	-	.	ID=Cattle_Y_E03781;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XM_024987972.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X1;transcript_id=Cattle_Y_T01753;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987972.2-14
haplotype2-0000357	CAT	exon	51763526	51763647	.	-	.	ID=Cattle_Y_E03782;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XM_024987972.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X1;transcript_id=Cattle_Y_T01753;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987972.2-13
haplotype2-0000357	CAT	exon	51769154	51769214	.	-	.	ID=Cattle_Y_E03783;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XM_024987972.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X1;transcript_id=Cattle_Y_T01753;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987972.2-12
haplotype2-0000357	CAT	exon	51771600	51771697	.	-	.	ID=Cattle_Y_E03784;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XM_024987972.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X1;transcript_id=Cattle_Y_T01753;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987972.2-11
haplotype2-0000357	CAT	exon	51771831	51771894	.	-	.	ID=Cattle_Y_E03785;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XM_024987972.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X1;transcript_id=Cattle_Y_T01753;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987972.2-10
haplotype2-0000357	CAT	exon	51773394	51773535	.	-	.	ID=Cattle_Y_E03786;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XM_024987972.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X1;transcript_id=Cattle_Y_T01753;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987972.2-9
haplotype2-0000357	CAT	exon	51774181	51774313	.	-	.	ID=Cattle_Y_E03787;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XM_024987972.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X1;transcript_id=Cattle_Y_T01753;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987972.2-8
haplotype2-0000357	CAT	exon	51777923	51778187	.	-	.	ID=Cattle_Y_E03788;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XM_024987972.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X1;transcript_id=Cattle_Y_T01753;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987972.2-7
haplotype2-0000357	CAT	exon	51783241	51783386	.	-	.	ID=Cattle_Y_E03789;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XM_024987972.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X1;transcript_id=Cattle_Y_T01753;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987972.2-6
haplotype2-0000357	CAT	exon	51813009	51813119	.	-	.	ID=Cattle_Y_E03790;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XM_024987972.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X1;transcript_id=Cattle_Y_T01753;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987972.2-5
haplotype2-0000357	CAT	exon	51824266	51824354	.	-	.	ID=Cattle_Y_E03791;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XM_024987972.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X1;transcript_id=Cattle_Y_T01753;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987972.2-4
haplotype2-0000357	CAT	exon	51865726	51865882	.	-	.	ID=Cattle_Y_E03792;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XM_024987972.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X1;transcript_id=Cattle_Y_T01753;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987972.2-3
haplotype2-0000357	CAT	exon	51903916	51903989	.	-	.	ID=Cattle_Y_E03793;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XM_024987972.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X1;transcript_id=Cattle_Y_T01753;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987972.2-2
haplotype2-0000357	CAT	exon	51999288	51999340	.	-	.	ID=Cattle_Y_E03794;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XM_024987972.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X1;transcript_id=Cattle_Y_T01753;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987972.2-1
haplotype2-0000357	CAT	CDS	51754508	51754534	.	-	0	ID=Cattle_Y_C03361;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XP_024843740.1,BGD:BT26461;Name=XP_024843740.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843740.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01753;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51755487	51755588	.	-	0	ID=Cattle_Y_C03362;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XP_024843740.1,BGD:BT26461;Name=XP_024843740.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843740.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01753;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51757220	51757385	.	-	1	ID=Cattle_Y_C03363;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XP_024843740.1,BGD:BT26461;Name=XP_024843740.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843740.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01753;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51760161	51760288	.	-	0	ID=Cattle_Y_C03364;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XP_024843740.1,BGD:BT26461;Name=XP_024843740.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843740.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01753;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51760799	51760873	.	-	0	ID=Cattle_Y_C03365;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XP_024843740.1,BGD:BT26461;Name=XP_024843740.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843740.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01753;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51763526	51763647	.	-	2	ID=Cattle_Y_C03366;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XP_024843740.1,BGD:BT26461;Name=XP_024843740.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843740.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01753;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51769154	51769214	.	-	0	ID=Cattle_Y_C03367;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XP_024843740.1,BGD:BT26461;Name=XP_024843740.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843740.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01753;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51771600	51771697	.	-	2	ID=Cattle_Y_C03368;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XP_024843740.1,BGD:BT26461;Name=XP_024843740.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843740.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01753;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51771831	51771894	.	-	0	ID=Cattle_Y_C03369;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XP_024843740.1,BGD:BT26461;Name=XP_024843740.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843740.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01753;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51773394	51773535	.	-	1	ID=Cattle_Y_C03370;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XP_024843740.1,BGD:BT26461;Name=XP_024843740.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843740.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01753;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51774181	51774313	.	-	2	ID=Cattle_Y_C03371;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XP_024843740.1,BGD:BT26461;Name=XP_024843740.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843740.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01753;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51777923	51778187	.	-	0	ID=Cattle_Y_C03372;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XP_024843740.1,BGD:BT26461;Name=XP_024843740.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843740.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01753;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51783241	51783386	.	-	2	ID=Cattle_Y_C03373;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XP_024843740.1,BGD:BT26461;Name=XP_024843740.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843740.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01753;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51813009	51813066	.	-	0	ID=Cattle_Y_C03374;Parent=Cattle_Y_T01753;Dbxref=GeneID:515972,GenBank:XP_024843740.1,BGD:BT26461;Name=XP_024843740.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843740.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01753;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	51753909	51999340	.	-	.	ID=Cattle_Y_T01754;Parent=Cattle_Y_G01027;Dbxref=GeneID:515972,GenBank:XM_024987974.2,BGD:BT26461;Name=XM_024987974.2;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;model_evidence=Supporting evidence includes similarity to: 1 mRNA%2C 37 ESTs%2C 12 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 57 samples with support for all annotated introns;product=transducin beta like 1 X-linked%2C transcript variant X3;transcript_id=Cattle_Y_T01754;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_024987974.2
haplotype2-0000357	CAT	exon	51753909	51754534	.	-	.	ID=Cattle_Y_E03795;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XM_024987974.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X3;transcript_id=Cattle_Y_T01754;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987974.2-18
haplotype2-0000357	CAT	exon	51755487	51755588	.	-	.	ID=Cattle_Y_E03796;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XM_024987974.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X3;transcript_id=Cattle_Y_T01754;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987974.2-17
haplotype2-0000357	CAT	exon	51757220	51757385	.	-	.	ID=Cattle_Y_E03797;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XM_024987974.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X3;transcript_id=Cattle_Y_T01754;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987974.2-16
haplotype2-0000357	CAT	exon	51760161	51760288	.	-	.	ID=Cattle_Y_E03798;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XM_024987974.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X3;transcript_id=Cattle_Y_T01754;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987974.2-15
haplotype2-0000357	CAT	exon	51760799	51760873	.	-	.	ID=Cattle_Y_E03799;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XM_024987974.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X3;transcript_id=Cattle_Y_T01754;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987974.2-14
haplotype2-0000357	CAT	exon	51763526	51763647	.	-	.	ID=Cattle_Y_E03800;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XM_024987974.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X3;transcript_id=Cattle_Y_T01754;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987974.2-13
haplotype2-0000357	CAT	exon	51769154	51769214	.	-	.	ID=Cattle_Y_E03801;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XM_024987974.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X3;transcript_id=Cattle_Y_T01754;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987974.2-12
haplotype2-0000357	CAT	exon	51771600	51771697	.	-	.	ID=Cattle_Y_E03802;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XM_024987974.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X3;transcript_id=Cattle_Y_T01754;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987974.2-11
haplotype2-0000357	CAT	exon	51771831	51771894	.	-	.	ID=Cattle_Y_E03803;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XM_024987974.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X3;transcript_id=Cattle_Y_T01754;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987974.2-10
haplotype2-0000357	CAT	exon	51773394	51773535	.	-	.	ID=Cattle_Y_E03804;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XM_024987974.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X3;transcript_id=Cattle_Y_T01754;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987974.2-9
haplotype2-0000357	CAT	exon	51774181	51774313	.	-	.	ID=Cattle_Y_E03805;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XM_024987974.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X3;transcript_id=Cattle_Y_T01754;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987974.2-8
haplotype2-0000357	CAT	exon	51777923	51778187	.	-	.	ID=Cattle_Y_E03806;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XM_024987974.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X3;transcript_id=Cattle_Y_T01754;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987974.2-7
haplotype2-0000357	CAT	exon	51783241	51783386	.	-	.	ID=Cattle_Y_E03807;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XM_024987974.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X3;transcript_id=Cattle_Y_T01754;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987974.2-6
haplotype2-0000357	CAT	exon	51813009	51813119	.	-	.	ID=Cattle_Y_E03808;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XM_024987974.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X3;transcript_id=Cattle_Y_T01754;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987974.2-5
haplotype2-0000357	CAT	exon	51824266	51824350	.	-	.	ID=Cattle_Y_E03809;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XM_024987974.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X3;transcript_id=Cattle_Y_T01754;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987974.2-4
haplotype2-0000357	CAT	exon	51865726	51865882	.	-	.	ID=Cattle_Y_E03810;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XM_024987974.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X3;transcript_id=Cattle_Y_T01754;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987974.2-3
haplotype2-0000357	CAT	exon	51903916	51903989	.	-	.	ID=Cattle_Y_E03811;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XM_024987974.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X3;transcript_id=Cattle_Y_T01754;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987974.2-2
haplotype2-0000357	CAT	exon	51999288	51999340	.	-	.	ID=Cattle_Y_E03812;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XM_024987974.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X3;transcript_id=Cattle_Y_T01754;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987974.2-1
haplotype2-0000357	CAT	CDS	51754508	51754534	.	-	0	ID=Cattle_Y_C03375;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XP_024843742.1,BGD:BT26461;Name=XP_024843742.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843742.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01754;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51755487	51755588	.	-	0	ID=Cattle_Y_C03376;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XP_024843742.1,BGD:BT26461;Name=XP_024843742.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843742.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01754;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51757220	51757385	.	-	1	ID=Cattle_Y_C03377;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XP_024843742.1,BGD:BT26461;Name=XP_024843742.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843742.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01754;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51760161	51760288	.	-	0	ID=Cattle_Y_C03378;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XP_024843742.1,BGD:BT26461;Name=XP_024843742.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843742.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01754;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51760799	51760873	.	-	0	ID=Cattle_Y_C03379;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XP_024843742.1,BGD:BT26461;Name=XP_024843742.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843742.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01754;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51763526	51763647	.	-	2	ID=Cattle_Y_C03380;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XP_024843742.1,BGD:BT26461;Name=XP_024843742.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843742.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01754;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51769154	51769214	.	-	0	ID=Cattle_Y_C03381;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XP_024843742.1,BGD:BT26461;Name=XP_024843742.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843742.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01754;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51771600	51771697	.	-	2	ID=Cattle_Y_C03382;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XP_024843742.1,BGD:BT26461;Name=XP_024843742.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843742.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01754;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51771831	51771894	.	-	0	ID=Cattle_Y_C03383;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XP_024843742.1,BGD:BT26461;Name=XP_024843742.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843742.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01754;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51773394	51773535	.	-	1	ID=Cattle_Y_C03384;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XP_024843742.1,BGD:BT26461;Name=XP_024843742.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843742.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01754;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51774181	51774313	.	-	2	ID=Cattle_Y_C03385;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XP_024843742.1,BGD:BT26461;Name=XP_024843742.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843742.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01754;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51777923	51778187	.	-	0	ID=Cattle_Y_C03386;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XP_024843742.1,BGD:BT26461;Name=XP_024843742.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843742.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01754;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51783241	51783386	.	-	2	ID=Cattle_Y_C03387;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XP_024843742.1,BGD:BT26461;Name=XP_024843742.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843742.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01754;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51813009	51813066	.	-	0	ID=Cattle_Y_C03388;Parent=Cattle_Y_T01754;Dbxref=GeneID:515972,GenBank:XP_024843742.1,BGD:BT26461;Name=XP_024843742.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843742.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01754;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	51753909	51999340	.	-	.	ID=Cattle_Y_T01755;Parent=Cattle_Y_G01027;Dbxref=GeneID:515972,GenBank:XM_024987975.2,BGD:BT26461;Name=XM_024987975.2;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;model_evidence=Supporting evidence includes similarity to: 1 mRNA%2C 38 ESTs%2C 12 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 16 samples with support for all annotated introns;product=transducin beta like 1 X-linked%2C transcript variant X4;transcript_id=Cattle_Y_T01755;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_024987975.2
haplotype2-0000357	CAT	exon	51753909	51754534	.	-	.	ID=Cattle_Y_E03813;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XM_024987975.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X4;transcript_id=Cattle_Y_T01755;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987975.2-18
haplotype2-0000357	CAT	exon	51755487	51755588	.	-	.	ID=Cattle_Y_E03814;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XM_024987975.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X4;transcript_id=Cattle_Y_T01755;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987975.2-17
haplotype2-0000357	CAT	exon	51757220	51757385	.	-	.	ID=Cattle_Y_E03815;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XM_024987975.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X4;transcript_id=Cattle_Y_T01755;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987975.2-16
haplotype2-0000357	CAT	exon	51760161	51760288	.	-	.	ID=Cattle_Y_E03816;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XM_024987975.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X4;transcript_id=Cattle_Y_T01755;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987975.2-15
haplotype2-0000357	CAT	exon	51760799	51760873	.	-	.	ID=Cattle_Y_E03817;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XM_024987975.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X4;transcript_id=Cattle_Y_T01755;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987975.2-14
haplotype2-0000357	CAT	exon	51763526	51763647	.	-	.	ID=Cattle_Y_E03818;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XM_024987975.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X4;transcript_id=Cattle_Y_T01755;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987975.2-13
haplotype2-0000357	CAT	exon	51769154	51769214	.	-	.	ID=Cattle_Y_E03819;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XM_024987975.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X4;transcript_id=Cattle_Y_T01755;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987975.2-12
haplotype2-0000357	CAT	exon	51771600	51771697	.	-	.	ID=Cattle_Y_E03820;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XM_024987975.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X4;transcript_id=Cattle_Y_T01755;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987975.2-11
haplotype2-0000357	CAT	exon	51771831	51771894	.	-	.	ID=Cattle_Y_E03821;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XM_024987975.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X4;transcript_id=Cattle_Y_T01755;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987975.2-10
haplotype2-0000357	CAT	exon	51773394	51773535	.	-	.	ID=Cattle_Y_E03822;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XM_024987975.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X4;transcript_id=Cattle_Y_T01755;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987975.2-9
haplotype2-0000357	CAT	exon	51774181	51774313	.	-	.	ID=Cattle_Y_E03823;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XM_024987975.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X4;transcript_id=Cattle_Y_T01755;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987975.2-8
haplotype2-0000357	CAT	exon	51777923	51778187	.	-	.	ID=Cattle_Y_E03824;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XM_024987975.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X4;transcript_id=Cattle_Y_T01755;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987975.2-7
haplotype2-0000357	CAT	exon	51783241	51783386	.	-	.	ID=Cattle_Y_E03825;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XM_024987975.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X4;transcript_id=Cattle_Y_T01755;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987975.2-6
haplotype2-0000357	CAT	exon	51813009	51813119	.	-	.	ID=Cattle_Y_E03826;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XM_024987975.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X4;transcript_id=Cattle_Y_T01755;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987975.2-5
haplotype2-0000357	CAT	exon	51824266	51824354	.	-	.	ID=Cattle_Y_E03827;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XM_024987975.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X4;transcript_id=Cattle_Y_T01755;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987975.2-4
haplotype2-0000357	CAT	exon	51903916	51903989	.	-	.	ID=Cattle_Y_E03828;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XM_024987975.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X4;transcript_id=Cattle_Y_T01755;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987975.2-3
haplotype2-0000357	CAT	exon	51962430	51962496	.	-	.	ID=Cattle_Y_E03829;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XM_024987975.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X4;transcript_id=Cattle_Y_T01755;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987975.2-2
haplotype2-0000357	CAT	exon	51999288	51999340	.	-	.	ID=Cattle_Y_E03830;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XM_024987975.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X4;transcript_id=Cattle_Y_T01755;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987975.2-1
haplotype2-0000357	CAT	CDS	51754508	51754534	.	-	0	ID=Cattle_Y_C03389;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XP_024843743.1,BGD:BT26461;Name=XP_024843743.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843743.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01755;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51755487	51755588	.	-	0	ID=Cattle_Y_C03390;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XP_024843743.1,BGD:BT26461;Name=XP_024843743.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843743.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01755;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51757220	51757385	.	-	1	ID=Cattle_Y_C03391;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XP_024843743.1,BGD:BT26461;Name=XP_024843743.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843743.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01755;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51760161	51760288	.	-	0	ID=Cattle_Y_C03392;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XP_024843743.1,BGD:BT26461;Name=XP_024843743.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843743.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01755;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51760799	51760873	.	-	0	ID=Cattle_Y_C03393;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XP_024843743.1,BGD:BT26461;Name=XP_024843743.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843743.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01755;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51763526	51763647	.	-	2	ID=Cattle_Y_C03394;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XP_024843743.1,BGD:BT26461;Name=XP_024843743.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843743.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01755;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51769154	51769214	.	-	0	ID=Cattle_Y_C03395;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XP_024843743.1,BGD:BT26461;Name=XP_024843743.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843743.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01755;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51771600	51771697	.	-	2	ID=Cattle_Y_C03396;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XP_024843743.1,BGD:BT26461;Name=XP_024843743.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843743.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01755;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51771831	51771894	.	-	0	ID=Cattle_Y_C03397;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XP_024843743.1,BGD:BT26461;Name=XP_024843743.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843743.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01755;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51773394	51773535	.	-	1	ID=Cattle_Y_C03398;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XP_024843743.1,BGD:BT26461;Name=XP_024843743.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843743.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01755;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51774181	51774313	.	-	2	ID=Cattle_Y_C03399;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XP_024843743.1,BGD:BT26461;Name=XP_024843743.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843743.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01755;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51777923	51778187	.	-	0	ID=Cattle_Y_C03400;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XP_024843743.1,BGD:BT26461;Name=XP_024843743.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843743.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01755;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51783241	51783386	.	-	2	ID=Cattle_Y_C03401;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XP_024843743.1,BGD:BT26461;Name=XP_024843743.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843743.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01755;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51813009	51813066	.	-	0	ID=Cattle_Y_C03402;Parent=Cattle_Y_T01755;Dbxref=GeneID:515972,GenBank:XP_024843743.1,BGD:BT26461;Name=XP_024843743.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843743.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01755;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	51753909	51999340	.	-	.	ID=Cattle_Y_T01756;Parent=Cattle_Y_G01027;Dbxref=GeneID:515972,GenBank:XM_024987976.2,BGD:BT26461;Name=XM_024987976.2;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;model_evidence=Supporting evidence includes similarity to: 1 mRNA%2C 38 ESTs%2C 12 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 25 samples with support for all annotated introns;product=transducin beta like 1 X-linked%2C transcript variant X2;transcript_id=Cattle_Y_T01756;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_024987976.2
haplotype2-0000357	CAT	exon	51753909	51754534	.	-	.	ID=Cattle_Y_E03831;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XM_024987976.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X2;transcript_id=Cattle_Y_T01756;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987976.2-17
haplotype2-0000357	CAT	exon	51755487	51755588	.	-	.	ID=Cattle_Y_E03832;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XM_024987976.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X2;transcript_id=Cattle_Y_T01756;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987976.2-16
haplotype2-0000357	CAT	exon	51757220	51757385	.	-	.	ID=Cattle_Y_E03833;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XM_024987976.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X2;transcript_id=Cattle_Y_T01756;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987976.2-15
haplotype2-0000357	CAT	exon	51760161	51760288	.	-	.	ID=Cattle_Y_E03834;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XM_024987976.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X2;transcript_id=Cattle_Y_T01756;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987976.2-14
haplotype2-0000357	CAT	exon	51760799	51760873	.	-	.	ID=Cattle_Y_E03835;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XM_024987976.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X2;transcript_id=Cattle_Y_T01756;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987976.2-13
haplotype2-0000357	CAT	exon	51763526	51763647	.	-	.	ID=Cattle_Y_E03836;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XM_024987976.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X2;transcript_id=Cattle_Y_T01756;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987976.2-12
haplotype2-0000357	CAT	exon	51769154	51769214	.	-	.	ID=Cattle_Y_E03837;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XM_024987976.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X2;transcript_id=Cattle_Y_T01756;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987976.2-11
haplotype2-0000357	CAT	exon	51771600	51771697	.	-	.	ID=Cattle_Y_E03838;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XM_024987976.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X2;transcript_id=Cattle_Y_T01756;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987976.2-10
haplotype2-0000357	CAT	exon	51771831	51771894	.	-	.	ID=Cattle_Y_E03839;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XM_024987976.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X2;transcript_id=Cattle_Y_T01756;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987976.2-9
haplotype2-0000357	CAT	exon	51773394	51773535	.	-	.	ID=Cattle_Y_E03840;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XM_024987976.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X2;transcript_id=Cattle_Y_T01756;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987976.2-8
haplotype2-0000357	CAT	exon	51774181	51774313	.	-	.	ID=Cattle_Y_E03841;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XM_024987976.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X2;transcript_id=Cattle_Y_T01756;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987976.2-7
haplotype2-0000357	CAT	exon	51777923	51778187	.	-	.	ID=Cattle_Y_E03842;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XM_024987976.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X2;transcript_id=Cattle_Y_T01756;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987976.2-6
haplotype2-0000357	CAT	exon	51783241	51783386	.	-	.	ID=Cattle_Y_E03843;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XM_024987976.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X2;transcript_id=Cattle_Y_T01756;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987976.2-5
haplotype2-0000357	CAT	exon	51813009	51813119	.	-	.	ID=Cattle_Y_E03844;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XM_024987976.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X2;transcript_id=Cattle_Y_T01756;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987976.2-4
haplotype2-0000357	CAT	exon	51824266	51824354	.	-	.	ID=Cattle_Y_E03845;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XM_024987976.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X2;transcript_id=Cattle_Y_T01756;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987976.2-3
haplotype2-0000357	CAT	exon	51903916	51903989	.	-	.	ID=Cattle_Y_E03846;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XM_024987976.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X2;transcript_id=Cattle_Y_T01756;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987976.2-2
haplotype2-0000357	CAT	exon	51999288	51999340	.	-	.	ID=Cattle_Y_E03847;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XM_024987976.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X2;transcript_id=Cattle_Y_T01756;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987976.2-1
haplotype2-0000357	CAT	CDS	51754508	51754534	.	-	0	ID=Cattle_Y_C03403;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XP_024843744.1,BGD:BT26461;Name=XP_024843744.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843744.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01756;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51755487	51755588	.	-	0	ID=Cattle_Y_C03404;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XP_024843744.1,BGD:BT26461;Name=XP_024843744.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843744.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01756;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51757220	51757385	.	-	1	ID=Cattle_Y_C03405;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XP_024843744.1,BGD:BT26461;Name=XP_024843744.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843744.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01756;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51760161	51760288	.	-	0	ID=Cattle_Y_C03406;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XP_024843744.1,BGD:BT26461;Name=XP_024843744.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843744.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01756;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51760799	51760873	.	-	0	ID=Cattle_Y_C03407;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XP_024843744.1,BGD:BT26461;Name=XP_024843744.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843744.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01756;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51763526	51763647	.	-	2	ID=Cattle_Y_C03408;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XP_024843744.1,BGD:BT26461;Name=XP_024843744.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843744.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01756;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51769154	51769214	.	-	0	ID=Cattle_Y_C03409;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XP_024843744.1,BGD:BT26461;Name=XP_024843744.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843744.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01756;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51771600	51771697	.	-	2	ID=Cattle_Y_C03410;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XP_024843744.1,BGD:BT26461;Name=XP_024843744.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843744.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01756;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51771831	51771894	.	-	0	ID=Cattle_Y_C03411;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XP_024843744.1,BGD:BT26461;Name=XP_024843744.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843744.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01756;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51773394	51773535	.	-	1	ID=Cattle_Y_C03412;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XP_024843744.1,BGD:BT26461;Name=XP_024843744.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843744.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01756;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51774181	51774313	.	-	2	ID=Cattle_Y_C03413;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XP_024843744.1,BGD:BT26461;Name=XP_024843744.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843744.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01756;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51777923	51778187	.	-	0	ID=Cattle_Y_C03414;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XP_024843744.1,BGD:BT26461;Name=XP_024843744.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843744.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01756;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51783241	51783386	.	-	2	ID=Cattle_Y_C03415;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XP_024843744.1,BGD:BT26461;Name=XP_024843744.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843744.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01756;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51813009	51813066	.	-	0	ID=Cattle_Y_C03416;Parent=Cattle_Y_T01756;Dbxref=GeneID:515972,GenBank:XP_024843744.1,BGD:BT26461;Name=XP_024843744.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_024843744.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01756;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	51753909	51999340	.	-	.	ID=Cattle_Y_T01757;Parent=Cattle_Y_G01027;Dbxref=GeneID:515972,GenBank:XM_024987977.2,BGD:BT26461;Name=XM_024987977.2;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;model_evidence=Supporting evidence includes similarity to: 37 ESTs%2C 1 Protein%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 41 samples with support for all annotated introns;product=transducin beta like 1 X-linked%2C transcript variant X7;transcript_id=Cattle_Y_T01757;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_024987977.2
haplotype2-0000357	CAT	exon	51753909	51754534	.	-	.	ID=Cattle_Y_E03848;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XM_024987977.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X7;transcript_id=Cattle_Y_T01757;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987977.2-17
haplotype2-0000357	CAT	exon	51755487	51755588	.	-	.	ID=Cattle_Y_E03849;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XM_024987977.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X7;transcript_id=Cattle_Y_T01757;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987977.2-16
haplotype2-0000357	CAT	exon	51757220	51757385	.	-	.	ID=Cattle_Y_E03850;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XM_024987977.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X7;transcript_id=Cattle_Y_T01757;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987977.2-15
haplotype2-0000357	CAT	exon	51760161	51760288	.	-	.	ID=Cattle_Y_E03851;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XM_024987977.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X7;transcript_id=Cattle_Y_T01757;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987977.2-14
haplotype2-0000357	CAT	exon	51760799	51760873	.	-	.	ID=Cattle_Y_E03852;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XM_024987977.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X7;transcript_id=Cattle_Y_T01757;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987977.2-13
haplotype2-0000357	CAT	exon	51763526	51763647	.	-	.	ID=Cattle_Y_E03853;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XM_024987977.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X7;transcript_id=Cattle_Y_T01757;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987977.2-12
haplotype2-0000357	CAT	exon	51769154	51769214	.	-	.	ID=Cattle_Y_E03854;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XM_024987977.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X7;transcript_id=Cattle_Y_T01757;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987977.2-11
haplotype2-0000357	CAT	exon	51771600	51771697	.	-	.	ID=Cattle_Y_E03855;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XM_024987977.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X7;transcript_id=Cattle_Y_T01757;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987977.2-10
haplotype2-0000357	CAT	exon	51771831	51771894	.	-	.	ID=Cattle_Y_E03856;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XM_024987977.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X7;transcript_id=Cattle_Y_T01757;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987977.2-9
haplotype2-0000357	CAT	exon	51773394	51773535	.	-	.	ID=Cattle_Y_E03857;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XM_024987977.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X7;transcript_id=Cattle_Y_T01757;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987977.2-8
haplotype2-0000357	CAT	exon	51774181	51774313	.	-	.	ID=Cattle_Y_E03858;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XM_024987977.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X7;transcript_id=Cattle_Y_T01757;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987977.2-7
haplotype2-0000357	CAT	exon	51777923	51778187	.	-	.	ID=Cattle_Y_E03859;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XM_024987977.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X7;transcript_id=Cattle_Y_T01757;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987977.2-6
haplotype2-0000357	CAT	exon	51783241	51783386	.	-	.	ID=Cattle_Y_E03860;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XM_024987977.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X7;transcript_id=Cattle_Y_T01757;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987977.2-5
haplotype2-0000357	CAT	exon	51824266	51824354	.	-	.	ID=Cattle_Y_E03861;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XM_024987977.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X7;transcript_id=Cattle_Y_T01757;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987977.2-4
haplotype2-0000357	CAT	exon	51865726	51865882	.	-	.	ID=Cattle_Y_E03862;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XM_024987977.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X7;transcript_id=Cattle_Y_T01757;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987977.2-3
haplotype2-0000357	CAT	exon	51903916	51903989	.	-	.	ID=Cattle_Y_E03863;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XM_024987977.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X7;transcript_id=Cattle_Y_T01757;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987977.2-2
haplotype2-0000357	CAT	exon	51999288	51999340	.	-	.	ID=Cattle_Y_E03864;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XM_024987977.2,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X7;transcript_id=Cattle_Y_T01757;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987977.2-1
haplotype2-0000357	CAT	CDS	51754508	51754534	.	-	0	ID=Cattle_Y_C03417;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XP_024843745.1,BGD:BT26461;Name=XP_024843745.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X2;protein_id=XP_024843745.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01757;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51755487	51755588	.	-	0	ID=Cattle_Y_C03418;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XP_024843745.1,BGD:BT26461;Name=XP_024843745.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X2;protein_id=XP_024843745.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01757;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51757220	51757385	.	-	1	ID=Cattle_Y_C03419;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XP_024843745.1,BGD:BT26461;Name=XP_024843745.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X2;protein_id=XP_024843745.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01757;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51760161	51760288	.	-	0	ID=Cattle_Y_C03420;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XP_024843745.1,BGD:BT26461;Name=XP_024843745.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X2;protein_id=XP_024843745.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01757;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51760799	51760873	.	-	0	ID=Cattle_Y_C03421;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XP_024843745.1,BGD:BT26461;Name=XP_024843745.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X2;protein_id=XP_024843745.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01757;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51763526	51763647	.	-	2	ID=Cattle_Y_C03422;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XP_024843745.1,BGD:BT26461;Name=XP_024843745.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X2;protein_id=XP_024843745.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01757;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51769154	51769214	.	-	0	ID=Cattle_Y_C03423;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XP_024843745.1,BGD:BT26461;Name=XP_024843745.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X2;protein_id=XP_024843745.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01757;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51771600	51771697	.	-	2	ID=Cattle_Y_C03424;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XP_024843745.1,BGD:BT26461;Name=XP_024843745.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X2;protein_id=XP_024843745.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01757;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51771831	51771894	.	-	0	ID=Cattle_Y_C03425;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XP_024843745.1,BGD:BT26461;Name=XP_024843745.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X2;protein_id=XP_024843745.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01757;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51773394	51773535	.	-	1	ID=Cattle_Y_C03426;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XP_024843745.1,BGD:BT26461;Name=XP_024843745.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X2;protein_id=XP_024843745.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01757;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51774181	51774313	.	-	2	ID=Cattle_Y_C03427;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XP_024843745.1,BGD:BT26461;Name=XP_024843745.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X2;protein_id=XP_024843745.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01757;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51777923	51778130	.	-	0	ID=Cattle_Y_C03428;Parent=Cattle_Y_T01757;Dbxref=GeneID:515972,GenBank:XP_024843745.1,BGD:BT26461;Name=XP_024843745.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X2;protein_id=XP_024843745.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01757;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	51753909	51999340	.	-	.	ID=Cattle_Y_T01758;Parent=Cattle_Y_G01027;Dbxref=GeneID:515972,GenBank:XM_059883982.1,BGD:BT26461;Name=XM_059883982.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;model_evidence=Supporting evidence includes similarity to: 1 mRNA%2C 38 ESTs%2C 12 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 6 samples with support for all annotated introns;product=transducin beta like 1 X-linked%2C transcript variant X5;transcript_id=Cattle_Y_T01758;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883982.1
haplotype2-0000357	CAT	exon	51753909	51754534	.	-	.	ID=Cattle_Y_E03865;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XM_059883982.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X5;transcript_id=Cattle_Y_T01758;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883982.1-18
haplotype2-0000357	CAT	exon	51755487	51755588	.	-	.	ID=Cattle_Y_E03866;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XM_059883982.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X5;transcript_id=Cattle_Y_T01758;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883982.1-17
haplotype2-0000357	CAT	exon	51757220	51757385	.	-	.	ID=Cattle_Y_E03867;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XM_059883982.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X5;transcript_id=Cattle_Y_T01758;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883982.1-16
haplotype2-0000357	CAT	exon	51760161	51760288	.	-	.	ID=Cattle_Y_E03868;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XM_059883982.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X5;transcript_id=Cattle_Y_T01758;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883982.1-15
haplotype2-0000357	CAT	exon	51760799	51760873	.	-	.	ID=Cattle_Y_E03869;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XM_059883982.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X5;transcript_id=Cattle_Y_T01758;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883982.1-14
haplotype2-0000357	CAT	exon	51763526	51763647	.	-	.	ID=Cattle_Y_E03870;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XM_059883982.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X5;transcript_id=Cattle_Y_T01758;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883982.1-13
haplotype2-0000357	CAT	exon	51769154	51769214	.	-	.	ID=Cattle_Y_E03871;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XM_059883982.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X5;transcript_id=Cattle_Y_T01758;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883982.1-12
haplotype2-0000357	CAT	exon	51771600	51771697	.	-	.	ID=Cattle_Y_E03872;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XM_059883982.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X5;transcript_id=Cattle_Y_T01758;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883982.1-11
haplotype2-0000357	CAT	exon	51771831	51771894	.	-	.	ID=Cattle_Y_E03873;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XM_059883982.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X5;transcript_id=Cattle_Y_T01758;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883982.1-10
haplotype2-0000357	CAT	exon	51773394	51773535	.	-	.	ID=Cattle_Y_E03874;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XM_059883982.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X5;transcript_id=Cattle_Y_T01758;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883982.1-9
haplotype2-0000357	CAT	exon	51774181	51774313	.	-	.	ID=Cattle_Y_E03875;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XM_059883982.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X5;transcript_id=Cattle_Y_T01758;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883982.1-8
haplotype2-0000357	CAT	exon	51777923	51778187	.	-	.	ID=Cattle_Y_E03876;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XM_059883982.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X5;transcript_id=Cattle_Y_T01758;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883982.1-7
haplotype2-0000357	CAT	exon	51783241	51783386	.	-	.	ID=Cattle_Y_E03877;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XM_059883982.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X5;transcript_id=Cattle_Y_T01758;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883982.1-6
haplotype2-0000357	CAT	exon	51813009	51813119	.	-	.	ID=Cattle_Y_E03878;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XM_059883982.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X5;transcript_id=Cattle_Y_T01758;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883982.1-5
haplotype2-0000357	CAT	exon	51824266	51824354	.	-	.	ID=Cattle_Y_E03879;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XM_059883982.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X5;transcript_id=Cattle_Y_T01758;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883982.1-4
haplotype2-0000357	CAT	exon	51903916	51903989	.	-	.	ID=Cattle_Y_E03880;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XM_059883982.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X5;transcript_id=Cattle_Y_T01758;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883982.1-3
haplotype2-0000357	CAT	exon	51921386	51921454	.	-	.	ID=Cattle_Y_E03881;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XM_059883982.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X5;transcript_id=Cattle_Y_T01758;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883982.1-2
haplotype2-0000357	CAT	exon	51999288	51999340	.	-	.	ID=Cattle_Y_E03882;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XM_059883982.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X5;transcript_id=Cattle_Y_T01758;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883982.1-1
haplotype2-0000357	CAT	CDS	51754508	51754534	.	-	0	ID=Cattle_Y_C03429;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XP_059739965.1,BGD:BT26461;Name=XP_059739965.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739965.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01758;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51755487	51755588	.	-	0	ID=Cattle_Y_C03430;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XP_059739965.1,BGD:BT26461;Name=XP_059739965.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739965.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01758;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51757220	51757385	.	-	1	ID=Cattle_Y_C03431;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XP_059739965.1,BGD:BT26461;Name=XP_059739965.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739965.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01758;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51760161	51760288	.	-	0	ID=Cattle_Y_C03432;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XP_059739965.1,BGD:BT26461;Name=XP_059739965.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739965.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01758;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51760799	51760873	.	-	0	ID=Cattle_Y_C03433;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XP_059739965.1,BGD:BT26461;Name=XP_059739965.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739965.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01758;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51763526	51763647	.	-	2	ID=Cattle_Y_C03434;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XP_059739965.1,BGD:BT26461;Name=XP_059739965.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739965.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01758;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51769154	51769214	.	-	0	ID=Cattle_Y_C03435;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XP_059739965.1,BGD:BT26461;Name=XP_059739965.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739965.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01758;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51771600	51771697	.	-	2	ID=Cattle_Y_C03436;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XP_059739965.1,BGD:BT26461;Name=XP_059739965.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739965.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01758;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51771831	51771894	.	-	0	ID=Cattle_Y_C03437;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XP_059739965.1,BGD:BT26461;Name=XP_059739965.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739965.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01758;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51773394	51773535	.	-	1	ID=Cattle_Y_C03438;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XP_059739965.1,BGD:BT26461;Name=XP_059739965.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739965.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01758;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51774181	51774313	.	-	2	ID=Cattle_Y_C03439;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XP_059739965.1,BGD:BT26461;Name=XP_059739965.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739965.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01758;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51777923	51778187	.	-	0	ID=Cattle_Y_C03440;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XP_059739965.1,BGD:BT26461;Name=XP_059739965.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739965.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01758;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51783241	51783386	.	-	2	ID=Cattle_Y_C03441;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XP_059739965.1,BGD:BT26461;Name=XP_059739965.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739965.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01758;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51813009	51813066	.	-	0	ID=Cattle_Y_C03442;Parent=Cattle_Y_T01758;Dbxref=GeneID:515972,GenBank:XP_059739965.1,BGD:BT26461;Name=XP_059739965.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739965.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01758;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	51753909	51999340	.	-	.	ID=Cattle_Y_T01759;Parent=Cattle_Y_G01027;Dbxref=GeneID:515972,GenBank:XM_059883983.1,BGD:BT26461;Name=XM_059883983.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;model_evidence=Supporting evidence includes similarity to: 1 mRNA%2C 37 ESTs%2C 12 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 28 samples with support for all annotated introns;product=transducin beta like 1 X-linked%2C transcript variant X6;transcript_id=Cattle_Y_T01759;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883983.1
haplotype2-0000357	CAT	exon	51753909	51754534	.	-	.	ID=Cattle_Y_E03883;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XM_059883983.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X6;transcript_id=Cattle_Y_T01759;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883983.1-17
haplotype2-0000357	CAT	exon	51755487	51755588	.	-	.	ID=Cattle_Y_E03884;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XM_059883983.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X6;transcript_id=Cattle_Y_T01759;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883983.1-16
haplotype2-0000357	CAT	exon	51757220	51757385	.	-	.	ID=Cattle_Y_E03885;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XM_059883983.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X6;transcript_id=Cattle_Y_T01759;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883983.1-15
haplotype2-0000357	CAT	exon	51760161	51760288	.	-	.	ID=Cattle_Y_E03886;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XM_059883983.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X6;transcript_id=Cattle_Y_T01759;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883983.1-14
haplotype2-0000357	CAT	exon	51760799	51760873	.	-	.	ID=Cattle_Y_E03887;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XM_059883983.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X6;transcript_id=Cattle_Y_T01759;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883983.1-13
haplotype2-0000357	CAT	exon	51763526	51763647	.	-	.	ID=Cattle_Y_E03888;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XM_059883983.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X6;transcript_id=Cattle_Y_T01759;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883983.1-12
haplotype2-0000357	CAT	exon	51769154	51769214	.	-	.	ID=Cattle_Y_E03889;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XM_059883983.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X6;transcript_id=Cattle_Y_T01759;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883983.1-11
haplotype2-0000357	CAT	exon	51771600	51771697	.	-	.	ID=Cattle_Y_E03890;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XM_059883983.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X6;transcript_id=Cattle_Y_T01759;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883983.1-10
haplotype2-0000357	CAT	exon	51771831	51771894	.	-	.	ID=Cattle_Y_E03891;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XM_059883983.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X6;transcript_id=Cattle_Y_T01759;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883983.1-9
haplotype2-0000357	CAT	exon	51773394	51773535	.	-	.	ID=Cattle_Y_E03892;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XM_059883983.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X6;transcript_id=Cattle_Y_T01759;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883983.1-8
haplotype2-0000357	CAT	exon	51774181	51774313	.	-	.	ID=Cattle_Y_E03893;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XM_059883983.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X6;transcript_id=Cattle_Y_T01759;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883983.1-7
haplotype2-0000357	CAT	exon	51777923	51778187	.	-	.	ID=Cattle_Y_E03894;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XM_059883983.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X6;transcript_id=Cattle_Y_T01759;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883983.1-6
haplotype2-0000357	CAT	exon	51783241	51783386	.	-	.	ID=Cattle_Y_E03895;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XM_059883983.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X6;transcript_id=Cattle_Y_T01759;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883983.1-5
haplotype2-0000357	CAT	exon	51813009	51813119	.	-	.	ID=Cattle_Y_E03896;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XM_059883983.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X6;transcript_id=Cattle_Y_T01759;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883983.1-4
haplotype2-0000357	CAT	exon	51865726	51865882	.	-	.	ID=Cattle_Y_E03897;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XM_059883983.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X6;transcript_id=Cattle_Y_T01759;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883983.1-3
haplotype2-0000357	CAT	exon	51903916	51903989	.	-	.	ID=Cattle_Y_E03898;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XM_059883983.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X6;transcript_id=Cattle_Y_T01759;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883983.1-2
haplotype2-0000357	CAT	exon	51999288	51999340	.	-	.	ID=Cattle_Y_E03899;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XM_059883983.1,BGD:BT26461;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=TBL1X;product=transducin beta like 1 X-linked, transcript variant X6;transcript_id=Cattle_Y_T01759;gene_id=Cattle_Y_G01027;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883983.1-1
haplotype2-0000357	CAT	CDS	51754508	51754534	.	-	0	ID=Cattle_Y_C03443;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XP_059739966.1,BGD:BT26461;Name=XP_059739966.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739966.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01759;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51755487	51755588	.	-	0	ID=Cattle_Y_C03444;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XP_059739966.1,BGD:BT26461;Name=XP_059739966.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739966.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01759;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51757220	51757385	.	-	1	ID=Cattle_Y_C03445;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XP_059739966.1,BGD:BT26461;Name=XP_059739966.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739966.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01759;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51760161	51760288	.	-	0	ID=Cattle_Y_C03446;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XP_059739966.1,BGD:BT26461;Name=XP_059739966.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739966.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01759;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51760799	51760873	.	-	0	ID=Cattle_Y_C03447;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XP_059739966.1,BGD:BT26461;Name=XP_059739966.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739966.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01759;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51763526	51763647	.	-	2	ID=Cattle_Y_C03448;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XP_059739966.1,BGD:BT26461;Name=XP_059739966.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739966.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01759;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51769154	51769214	.	-	0	ID=Cattle_Y_C03449;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XP_059739966.1,BGD:BT26461;Name=XP_059739966.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739966.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01759;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51771600	51771697	.	-	2	ID=Cattle_Y_C03450;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XP_059739966.1,BGD:BT26461;Name=XP_059739966.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739966.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01759;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51771831	51771894	.	-	0	ID=Cattle_Y_C03451;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XP_059739966.1,BGD:BT26461;Name=XP_059739966.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739966.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01759;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51773394	51773535	.	-	1	ID=Cattle_Y_C03452;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XP_059739966.1,BGD:BT26461;Name=XP_059739966.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739966.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01759;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51774181	51774313	.	-	2	ID=Cattle_Y_C03453;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XP_059739966.1,BGD:BT26461;Name=XP_059739966.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739966.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01759;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51777923	51778187	.	-	0	ID=Cattle_Y_C03454;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XP_059739966.1,BGD:BT26461;Name=XP_059739966.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739966.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01759;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51783241	51783386	.	-	2	ID=Cattle_Y_C03455;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XP_059739966.1,BGD:BT26461;Name=XP_059739966.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739966.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01759;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	51813009	51813066	.	-	0	ID=Cattle_Y_C03456;Parent=Cattle_Y_T01759;Dbxref=GeneID:515972,GenBank:XP_059739966.1,BGD:BT26461;Name=XP_059739966.1;gbkey=CDS;gene=TBL1X;product=F-box-like/WD repeat-containing protein TBL1X isoform X1;protein_id=XP_059739966.1;gene_id=Cattle_Y_G01027;transcript_id=Cattle_Y_T01759;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	52136066	52189493	.	+	.	ID=Cattle_Y_G01028;Dbxref=GeneID:132344370;Name=LOC132344370;description=uncharacterized LOC132344370;gbkey=Gene;gene=LOC132344370;gene_biotype=lncRNA;gene_id=Cattle_Y_G01028;source_id=gene-LOC132344370-2
haplotype2-0000357	CAT	lnc_RNA	52136066	52189493	.	+	.	ID=Cattle_Y_T01760;Parent=Cattle_Y_G01028;Dbxref=GeneID:132344370,GenBank:XR_009493652.1;Name=XR_009493652.1;gbkey=ncRNA;gene=LOC132344370;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=uncharacterized lncRNA%2C transcript variant X1;transcript_id=Cattle_Y_T01760;gene_id=Cattle_Y_G01028;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=rna-XR_009493652.1
haplotype2-0000357	CAT	exon	52136066	52136147	.	+	.	ID=Cattle_Y_E03900;Parent=Cattle_Y_T01760;Dbxref=GeneID:132344370,GenBank:XR_009493652.1;gbkey=ncRNA;gene=LOC132344370;product=uncharacterized lncRNA, transcript variant X1;transcript_id=Cattle_Y_T01760;gene_id=Cattle_Y_G01028;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493652.1-1
haplotype2-0000357	CAT	exon	52137794	52137886	.	+	.	ID=Cattle_Y_E03901;Parent=Cattle_Y_T01760;Dbxref=GeneID:132344370,GenBank:XR_009493652.1;gbkey=ncRNA;gene=LOC132344370;product=uncharacterized lncRNA, transcript variant X1;transcript_id=Cattle_Y_T01760;gene_id=Cattle_Y_G01028;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493652.1-2
haplotype2-0000357	CAT	exon	52188981	52189493	.	+	.	ID=Cattle_Y_E03902;Parent=Cattle_Y_T01760;Dbxref=GeneID:132344370,GenBank:XR_009493652.1;gbkey=ncRNA;gene=LOC132344370;product=uncharacterized lncRNA, transcript variant X1;transcript_id=Cattle_Y_T01760;gene_id=Cattle_Y_G01028;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493652.1-3
haplotype2-0000357	CAT	gene	52177387	52177458	.	+	.	ID=Cattle_Y_G01029;Dbxref=GeneID:112445379;Name=TRNAC-GCA;description=transfer RNA cysteine (anticodon GCA);gbkey=Gene;gene=TRNAC-GCA;gene_biotype=tRNA;gene_id=Cattle_Y_G01029;source_id=gene-TRNAC-GCA-248
haplotype2-0000357	CAT	tRNA	52177387	52177458	.	+	.	ID=Cattle_Y_T01761;Parent=Cattle_Y_G01029;Dbxref=GeneID:112445379;Note=transfer RNA cysteine (anticodon GCA);anticodon=(pos:complement(6359055..6359057));gbkey=tRNA;gene=TRNAC-GCA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Cys;gene_id=Cattle_Y_G01029;transcript_id=Cattle_Y_T01761;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=rna-TRNAC-GCA-248
haplotype2-0000357	CAT	exon	52177387	52177458	.	+	.	ID=Cattle_Y_E03903;Parent=Cattle_Y_T01761;Dbxref=GeneID:112445379;Note=transfer RNA cysteine (anticodon GCA);anticodon=(pos:complement(6359055..6359057));gbkey=tRNA;gene=TRNAC-GCA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Cys;gene_id=Cattle_Y_G01029;transcript_id=Cattle_Y_T01761;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=exon-TRNAC-GCA-248-1
haplotype2-0000357	CAT	gene	52233218	52233289	.	+	.	ID=Cattle_Y_G01030;Dbxref=GeneID:132344398;Name=TRNAC-ACA;description=transfer RNA cysteine (anticodon ACA);gbkey=Gene;gene=TRNAC-ACA;gene_biotype=tRNA;gene_id=Cattle_Y_G01030;source_id=gene-TRNAC-ACA-249
haplotype2-0000357	CAT	tRNA	52233218	52233289	.	+	.	ID=Cattle_Y_T01762;Parent=Cattle_Y_G01030;Dbxref=GeneID:132344398;Note=transfer RNA cysteine (anticodon ACA);anticodon=(pos:5435069..5435071);gbkey=tRNA;gene=TRNAC-ACA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Cys;gene_id=Cattle_Y_G01030;transcript_id=Cattle_Y_T01762;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=rna-TRNAC-ACA-249
haplotype2-0000357	CAT	exon	52233218	52233289	.	+	.	ID=Cattle_Y_E03904;Parent=Cattle_Y_T01762;Dbxref=GeneID:132344398;Note=transfer RNA cysteine (anticodon ACA);anticodon=(pos:5435069..5435071);gbkey=tRNA;gene=TRNAC-ACA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Cys;gene_id=Cattle_Y_G01030;transcript_id=Cattle_Y_T01762;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=exon-TRNAC-ACA-249-1
haplotype2-0000357	CAT	gene	52499348	52499435	.	+	.	ID=Cattle_Y_G01031;Dbxref=GeneID:100313273,miRBase:MI0010453;Name=MIR584-8;description=microRNA mir-584-8;gbkey=Gene;gene=MIR584-8;gene_biotype=miRNA;gene_synonym=bta-mir-584-8;gene_id=Cattle_Y_G01031;source_id=gene-MIR584-8-2
haplotype2-0000357	CAT	primary_transcript	52499348	52499435	.	+	.	ID=Cattle_Y_T01763;Parent=Cattle_Y_G01031;Dbxref=GeneID:100313273,GenBank:NR_031238.1,miRBase:MI0010453;Name=NR_031238.1;gbkey=precursor_RNA;gene=MIR584-8;product=microRNA mir-584-8;transcript_id=Cattle_Y_T01763;gene_id=Cattle_Y_G01031;gene_biotype=miRNA;transcript_biotype=miRNA;source_id=rna-NR_031238.1-2
haplotype2-0000357	CAT	exon	52499348	52499435	.	+	.	ID=Cattle_Y_E03905;Parent=Cattle_Y_T01763;Dbxref=GeneID:100313273,GenBank:NR_031238.1,miRBase:MI0010453;gbkey=precursor_RNA;gene=MIR584-8;product=microRNA mir-584-8;transcript_id=Cattle_Y_T01763;gene_id=Cattle_Y_G01031;gene_biotype=miRNA;transcript_biotype=miRNA;source_id=exon-NR_031238.1-2-1
haplotype2-0000357	CAT	gene	52638365	52849227	.	+	.	ID=Cattle_Y_G01032;Dbxref=GeneID:525898,VGNC:VGNC:25957;Name=ANOS1;description=anosmin 1;gbkey=Gene;gene=ANOS1;gene_biotype=protein_coding;gene_id=Cattle_Y_G01032;source_id=gene-ANOS1-2
haplotype2-0000357	CAT	mRNA	52638365	52849227	.	+	.	ID=Cattle_Y_T01764;Parent=Cattle_Y_G01032;Dbxref=GeneID:525898,GenBank:XM_005228535.3,VGNC:VGNC:25957;Name=XM_005228535.3;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ANOS1;model_evidence=Supporting evidence includes similarity to: 27 ESTs%2C 1 Protein%2C 3 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 7 samples with support for all annotated introns;product=anosmin 1;transcript_id=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_005228535.3
haplotype2-0000357	CAT	exon	52638365	52638695	.	+	.	ID=Cattle_Y_E03906;Parent=Cattle_Y_T01764;Dbxref=GeneID:525898,GenBank:XM_005228535.3,VGNC:VGNC:25957;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ANOS1;product=anosmin 1;transcript_id=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228535.3-1
haplotype2-0000357	CAT	exon	52677517	52677564	.	+	.	ID=Cattle_Y_E03907;Parent=Cattle_Y_T01764;Dbxref=GeneID:525898,GenBank:XM_005228535.3,VGNC:VGNC:25957;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ANOS1;product=anosmin 1;transcript_id=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228535.3-1
haplotype2-0000357	CAT	exon	52759570	52759632	.	+	.	ID=Cattle_Y_E03908;Parent=Cattle_Y_T01764;Dbxref=GeneID:525898,GenBank:XM_005228535.3,VGNC:VGNC:25957;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ANOS1;product=anosmin 1;transcript_id=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228535.3-1
haplotype2-0000357	CAT	exon	52780784	52781006	.	+	.	ID=Cattle_Y_E03909;Parent=Cattle_Y_T01764;Dbxref=GeneID:525898,GenBank:XM_005228535.3,VGNC:VGNC:25957;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ANOS1;product=anosmin 1;transcript_id=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228535.3-1
haplotype2-0000357	CAT	exon	52793785	52793969	.	+	.	ID=Cattle_Y_E03910;Parent=Cattle_Y_T01764;Dbxref=GeneID:525898,GenBank:XM_005228535.3,VGNC:VGNC:25957;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ANOS1;product=anosmin 1;transcript_id=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228535.3-1
haplotype2-0000357	CAT	exon	52801086	52801215	.	+	.	ID=Cattle_Y_E03911;Parent=Cattle_Y_T01764;Dbxref=GeneID:525898,GenBank:XM_005228535.3,VGNC:VGNC:25957;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ANOS1;product=anosmin 1;transcript_id=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228535.3-1
haplotype2-0000357	CAT	exon	52810250	52810455	.	+	.	ID=Cattle_Y_E03912;Parent=Cattle_Y_T01764;Dbxref=GeneID:525898,GenBank:XM_005228535.3,VGNC:VGNC:25957;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ANOS1;product=anosmin 1;transcript_id=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228535.3-1
haplotype2-0000357	CAT	exon	52814466	52814610	.	+	.	ID=Cattle_Y_E03913;Parent=Cattle_Y_T01764;Dbxref=GeneID:525898,GenBank:XM_005228535.3,VGNC:VGNC:25957;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ANOS1;product=anosmin 1;transcript_id=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228535.3-1
haplotype2-0000357	CAT	exon	52823873	52824019	.	+	.	ID=Cattle_Y_E03914;Parent=Cattle_Y_T01764;Dbxref=GeneID:525898,GenBank:XM_005228535.3,VGNC:VGNC:25957;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ANOS1;product=anosmin 1;transcript_id=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228535.3-1
haplotype2-0000357	CAT	exon	52836345	52836439	.	+	.	ID=Cattle_Y_E03915;Parent=Cattle_Y_T01764;Dbxref=GeneID:525898,GenBank:XM_005228535.3,VGNC:VGNC:25957;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ANOS1;product=anosmin 1;transcript_id=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228535.3-1
haplotype2-0000357	CAT	exon	52838084	52838258	.	+	.	ID=Cattle_Y_E03916;Parent=Cattle_Y_T01764;Dbxref=GeneID:525898,GenBank:XM_005228535.3,VGNC:VGNC:25957;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ANOS1;product=anosmin 1;transcript_id=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228535.3-1
haplotype2-0000357	CAT	exon	52839371	52839597	.	+	.	ID=Cattle_Y_E03917;Parent=Cattle_Y_T01764;Dbxref=GeneID:525898,GenBank:XM_005228535.3,VGNC:VGNC:25957;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ANOS1;product=anosmin 1;transcript_id=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228535.3-1
haplotype2-0000357	CAT	exon	52840844	52840970	.	+	.	ID=Cattle_Y_E03918;Parent=Cattle_Y_T01764;Dbxref=GeneID:525898,GenBank:XM_005228535.3,VGNC:VGNC:25957;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ANOS1;product=anosmin 1;transcript_id=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228535.3-1
haplotype2-0000357	CAT	exon	52844642	52849227	.	+	.	ID=Cattle_Y_E03919;Parent=Cattle_Y_T01764;Dbxref=GeneID:525898,GenBank:XM_005228535.3,VGNC:VGNC:25957;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ANOS1;product=anosmin 1;transcript_id=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228535.3-14
haplotype2-0000357	CAT	CDS	52638489	52638695	.	+	0	ID=Cattle_Y_C03457;Parent=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;transcript_id=Cattle_Y_T01764;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	52677517	52677564	.	+	0	ID=Cattle_Y_C03458;Parent=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;transcript_id=Cattle_Y_T01764;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	52759570	52759632	.	+	0	ID=Cattle_Y_C03459;Parent=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;transcript_id=Cattle_Y_T01764;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	52780784	52781006	.	+	0	ID=Cattle_Y_C03460;Parent=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;transcript_id=Cattle_Y_T01764;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	52793785	52793969	.	+	2	ID=Cattle_Y_C03461;Parent=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;transcript_id=Cattle_Y_T01764;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	52801086	52801215	.	+	0	ID=Cattle_Y_C03462;Parent=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;transcript_id=Cattle_Y_T01764;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	52810250	52810455	.	+	2	ID=Cattle_Y_C03463;Parent=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;transcript_id=Cattle_Y_T01764;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	52814466	52814610	.	+	0	ID=Cattle_Y_C03464;Parent=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;transcript_id=Cattle_Y_T01764;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	52823873	52824019	.	+	2	ID=Cattle_Y_C03465;Parent=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;transcript_id=Cattle_Y_T01764;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	52836345	52836439	.	+	2	ID=Cattle_Y_C03466;Parent=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;transcript_id=Cattle_Y_T01764;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	52838084	52838258	.	+	0	ID=Cattle_Y_C03467;Parent=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;transcript_id=Cattle_Y_T01764;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	52839371	52839597	.	+	2	ID=Cattle_Y_C03468;Parent=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;transcript_id=Cattle_Y_T01764;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	52840844	52840970	.	+	0	ID=Cattle_Y_C03469;Parent=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;transcript_id=Cattle_Y_T01764;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	52844642	52844700	.	+	2	ID=Cattle_Y_C03470;Parent=Cattle_Y_T01764;gene_id=Cattle_Y_G01032;transcript_id=Cattle_Y_T01764;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	52826267	52834301	.	-	.	ID=Cattle_Y_G01033;Dbxref=GeneID:104970644;Name=LOC104970644;description=uncharacterized LOC104970644;gbkey=Gene;gene=LOC104970644;gene_biotype=lncRNA;gene_id=Cattle_Y_G01033;source_id=gene-LOC104970644
haplotype2-0000357	CAT	lnc_RNA	52826267	52834301	.	-	.	ID=Cattle_Y_T01765;Parent=Cattle_Y_G01033;Dbxref=GeneID:104970644,GenBank:XR_003033424.2;Name=XR_003033424.2;gbkey=ncRNA;gene=LOC104970644;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 18 samples with support for all annotated introns;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01765;gene_id=Cattle_Y_G01033;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=rna-XR_003033424.2
haplotype2-0000357	CAT	exon	52826267	52827241	.	-	.	ID=Cattle_Y_E03920;Parent=Cattle_Y_T01765;Dbxref=GeneID:104970644,GenBank:XR_003033424.2;gbkey=ncRNA;gene=LOC104970644;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01765;gene_id=Cattle_Y_G01033;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_003033424.2-3
haplotype2-0000357	CAT	exon	52827901	52828129	.	-	.	ID=Cattle_Y_E03921;Parent=Cattle_Y_T01765;Dbxref=GeneID:104970644,GenBank:XR_003033424.2;gbkey=ncRNA;gene=LOC104970644;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01765;gene_id=Cattle_Y_G01033;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_003033424.2-2
haplotype2-0000357	CAT	exon	52833932	52834301	.	-	.	ID=Cattle_Y_E03922;Parent=Cattle_Y_T01765;Dbxref=GeneID:104970644,GenBank:XR_003033424.2;gbkey=ncRNA;gene=LOC104970644;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01765;gene_id=Cattle_Y_G01033;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_003033424.2-1
haplotype2-0000357	CAT	gene	52916059	53163017	.	-	.	ID=Cattle_Y_G01034;Dbxref=GeneID:132344464;Name=LOC132344464;description=uncharacterized LOC132344464;gbkey=Gene;gene=LOC132344464;gene_biotype=lncRNA;gene_id=Cattle_Y_G01034;source_id=gene-LOC132344464
haplotype2-0000357	CAT	lnc_RNA	52916059	53163017	.	-	.	ID=Cattle_Y_T01766;Parent=Cattle_Y_G01034;Dbxref=GeneID:132344464,GenBank:XR_009493650.1;Name=XR_009493650.1;gbkey=ncRNA;gene=LOC132344464;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01766;gene_id=Cattle_Y_G01034;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=rna-XR_009493650.1
haplotype2-0000357	CAT	exon	52916059	52918355	.	-	.	ID=Cattle_Y_E03923;Parent=Cattle_Y_T01766;Dbxref=GeneID:132344464,GenBank:XR_009493650.1;gbkey=ncRNA;gene=LOC132344464;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01766;gene_id=Cattle_Y_G01034;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493650.1-9
haplotype2-0000357	CAT	exon	52927763	52927964	.	-	.	ID=Cattle_Y_E03924;Parent=Cattle_Y_T01766;Dbxref=GeneID:132344464,GenBank:XR_009493650.1;gbkey=ncRNA;gene=LOC132344464;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01766;gene_id=Cattle_Y_G01034;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493650.1-8
haplotype2-0000357	CAT	exon	52954470	52954566	.	-	.	ID=Cattle_Y_E03925;Parent=Cattle_Y_T01766;Dbxref=GeneID:132344464,GenBank:XR_009493650.1;gbkey=ncRNA;gene=LOC132344464;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01766;gene_id=Cattle_Y_G01034;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493650.1-7
haplotype2-0000357	CAT	exon	52958879	52959082	.	-	.	ID=Cattle_Y_E03926;Parent=Cattle_Y_T01766;Dbxref=GeneID:132344464,GenBank:XR_009493650.1;gbkey=ncRNA;gene=LOC132344464;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01766;gene_id=Cattle_Y_G01034;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493650.1-6
haplotype2-0000357	CAT	exon	52971983	52972087	.	-	.	ID=Cattle_Y_E03927;Parent=Cattle_Y_T01766;Dbxref=GeneID:132344464,GenBank:XR_009493650.1;gbkey=ncRNA;gene=LOC132344464;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01766;gene_id=Cattle_Y_G01034;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493650.1-5
haplotype2-0000357	CAT	exon	52973426	52973541	.	-	.	ID=Cattle_Y_E03928;Parent=Cattle_Y_T01766;Dbxref=GeneID:132344464,GenBank:XR_009493650.1;gbkey=ncRNA;gene=LOC132344464;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01766;gene_id=Cattle_Y_G01034;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493650.1-4
haplotype2-0000357	CAT	exon	52992788	52992899	.	-	.	ID=Cattle_Y_E03929;Parent=Cattle_Y_T01766;Dbxref=GeneID:132344464,GenBank:XR_009493650.1;gbkey=ncRNA;gene=LOC132344464;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01766;gene_id=Cattle_Y_G01034;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493650.1-3
haplotype2-0000357	CAT	exon	53159778	53159879	.	-	.	ID=Cattle_Y_E03930;Parent=Cattle_Y_T01766;Dbxref=GeneID:132344464,GenBank:XR_009493650.1;gbkey=ncRNA;gene=LOC132344464;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01766;gene_id=Cattle_Y_G01034;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493650.1-2
haplotype2-0000357	CAT	exon	53161326	53163017	.	-	.	ID=Cattle_Y_E03931;Parent=Cattle_Y_T01766;Dbxref=GeneID:132344464,GenBank:XR_009493650.1;gbkey=ncRNA;gene=LOC132344464;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01766;gene_id=Cattle_Y_G01034;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493650.1-1
haplotype2-0000357	CAT	gene	53097404	53097475	.	-	.	ID=Cattle_Y_G01035;Dbxref=GeneID:132344398;Name=TRNAC-ACA;description=transfer RNA cysteine (anticodon ACA);gbkey=Gene;gene=TRNAC-ACA;gene_biotype=tRNA;gene_id=Cattle_Y_G01035;source_id=gene-TRNAC-ACA-249
haplotype2-0000357	CAT	tRNA	53097404	53097475	.	-	.	ID=Cattle_Y_T01767;Parent=Cattle_Y_G01035;Dbxref=GeneID:132344398;Note=transfer RNA cysteine (anticodon ACA);anticodon=(pos:5435069..5435071);gbkey=tRNA;gene=TRNAC-ACA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Cys;gene_id=Cattle_Y_G01035;transcript_id=Cattle_Y_T01767;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=rna-TRNAC-ACA-249
haplotype2-0000357	CAT	exon	53097404	53097475	.	-	.	ID=Cattle_Y_E03932;Parent=Cattle_Y_T01767;Dbxref=GeneID:132344398;Note=transfer RNA cysteine (anticodon ACA);anticodon=(pos:5435069..5435071);gbkey=tRNA;gene=TRNAC-ACA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Cys;gene_id=Cattle_Y_G01035;transcript_id=Cattle_Y_T01767;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=exon-TRNAC-ACA-249-1
haplotype2-0000357	CAT	gene	53150611	53150715	.	-	.	ID=Cattle_Y_G01036;Dbxref=GeneID:112445217;Name=LOC112445217;description=U6 spliceosomal RNA;gbkey=Gene;gene=LOC112445217;gene_biotype=snRNA;gene_id=Cattle_Y_G01036;source_id=gene-LOC112445217-2
haplotype2-0000357	CAT	snRNA	53150611	53150715	.	-	.	ID=Cattle_Y_T01768;Parent=Cattle_Y_G01036;Dbxref=GeneID:112445217,RFAM:RF00026,GenBank:XR_009493665.1;Name=XR_009493665.1;gbkey=ncRNA;gene=LOC112445217;inference=COORDINATES: profile:INFERNAL:1.1.4;product=U6 spliceosomal RNA;transcript_id=Cattle_Y_T01768;gene_id=Cattle_Y_G01036;gene_biotype=snRNA;transcript_biotype=snRNA;source_id=rna-XR_009493665.1
haplotype2-0000357	CAT	exon	53150611	53150715	.	-	.	ID=Cattle_Y_E03933;Parent=Cattle_Y_T01768;Dbxref=GeneID:112445217,RFAM:RF00026,GenBank:XR_009493665.1;gbkey=ncRNA;gene=LOC112445217;inference=COORDINATES: profile:INFERNAL:1.1.4;product=U6 spliceosomal RNA;transcript_id=Cattle_Y_T01768;gene_id=Cattle_Y_G01036;gene_biotype=snRNA;transcript_biotype=snRNA;source_id=exon-XR_009493665.1-1
haplotype2-0000357	CAT	gene	53166854	53232743	.	-	.	ID=Cattle_Y_G01037;Dbxref=GeneID:132344465;Name=LOC132344465;description=uncharacterized LOC132344465;gbkey=Gene;gene=LOC132344465;gene_biotype=lncRNA;gene_id=Cattle_Y_G01037;source_id=gene-LOC132344465
haplotype2-0000357	CAT	lnc_RNA	53166854	53232743	.	-	.	ID=Cattle_Y_T01769;Parent=Cattle_Y_G01037;Dbxref=GeneID:132344465,GenBank:XR_009493651.1;Name=XR_009493651.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=ncRNA;gene=LOC132344465;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01769;gene_id=Cattle_Y_G01037;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=rna-XR_009493651.1
haplotype2-0000357	CAT	exon	53166854	53169896	.	-	.	ID=Cattle_Y_E03934;Parent=Cattle_Y_T01769;Dbxref=GeneID:132344465,GenBank:XR_009493651.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=ncRNA;gene=LOC132344465;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01769;gene_id=Cattle_Y_G01037;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493651.1-2
haplotype2-0000357	CAT	exon	53220062	53232743	.	-	.	ID=Cattle_Y_E03935;Parent=Cattle_Y_T01769;Dbxref=GeneID:132344465,GenBank:XR_009493651.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=ncRNA;gene=LOC132344465;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01769;gene_id=Cattle_Y_G01037;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493651.1-1
haplotype2-0000357	CAT	gene	53269465	53324020	.	-	.	ID=Cattle_Y_G01038;Dbxref=GeneID:101902122;Name=LOC101902122;description=uncharacterized LOC101902122;gbkey=Gene;gene=LOC101902122;gene_biotype=protein_coding;gene_id=Cattle_Y_G01038;source_id=gene-LOC101902122-2
haplotype2-0000357	CAT	mRNA	53269465	53324020	.	-	.	ID=Cattle_Y_T01770;Parent=Cattle_Y_G01038;Dbxref=GeneID:101902122,GenBank:XM_059884003.1;Name=XM_059884003.1;gbkey=mRNA;gene=LOC101902122;model_evidence=Supporting evidence includes similarity to: 3 ESTs%2C and 97%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 35 samples with support for all annotated introns;product=uncharacterized protein%2C transcript variant X1;transcript_id=Cattle_Y_T01770;gene_id=Cattle_Y_G01038;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884003.1
haplotype2-0000357	CAT	exon	53269465	53272095	.	-	.	ID=Cattle_Y_E03936;Parent=Cattle_Y_T01770;Dbxref=GeneID:101902122,GenBank:XM_059884003.1;gbkey=mRNA;gene=LOC101902122;product=uncharacterized protein, transcript variant X1;transcript_id=Cattle_Y_T01770;gene_id=Cattle_Y_G01038;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884003.1-3
haplotype2-0000357	CAT	exon	53309691	53309771	.	-	.	ID=Cattle_Y_E03937;Parent=Cattle_Y_T01770;Dbxref=GeneID:101902122,GenBank:XM_059884003.1;gbkey=mRNA;gene=LOC101902122;product=uncharacterized protein, transcript variant X1;transcript_id=Cattle_Y_T01770;gene_id=Cattle_Y_G01038;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884003.1-3
haplotype2-0000357	CAT	exon	53323659	53324020	.	-	.	ID=Cattle_Y_E03938;Parent=Cattle_Y_T01770;Dbxref=GeneID:101902122,GenBank:XM_059884003.1;gbkey=mRNA;gene=LOC101902122;product=uncharacterized protein, transcript variant X1;transcript_id=Cattle_Y_T01770;gene_id=Cattle_Y_G01038;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884003.1-1
haplotype2-0000357	CAT	CDS	53272028	53272095	.	-	2	ID=Cattle_Y_C03471;Parent=Cattle_Y_T01770;gene_id=Cattle_Y_G01038;transcript_id=Cattle_Y_T01770;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53309691	53309771	.	-	2	ID=Cattle_Y_C03472;Parent=Cattle_Y_T01770;gene_id=Cattle_Y_G01038;transcript_id=Cattle_Y_T01770;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53323659	53323722	.	-	0	ID=Cattle_Y_C03473;Parent=Cattle_Y_T01770;gene_id=Cattle_Y_G01038;transcript_id=Cattle_Y_T01770;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	53288733	53288805	.	+	.	ID=Cattle_Y_G01039;Dbxref=GeneID:112445380;Name=TRNAE-UUC;description=transfer RNA glutamic acid (anticodon UUC);gbkey=Gene;gene=TRNAE-UUC;gene_biotype=tRNA;gene_id=Cattle_Y_G01039;source_id=gene-TRNAE-UUC-153
haplotype2-0000357	CAT	tRNA	53288733	53288805	.	+	.	ID=Cattle_Y_T01771;Parent=Cattle_Y_G01039;Dbxref=GeneID:112445380;Note=transfer RNA glutamic acid (anticodon UUC);anticodon=(pos:complement(5241130..5241132));gbkey=tRNA;gene=TRNAE-UUC;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Glu;gene_id=Cattle_Y_G01039;transcript_id=Cattle_Y_T01771;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=rna-TRNAE-UUC-153
haplotype2-0000357	CAT	exon	53288733	53288805	.	+	.	ID=Cattle_Y_E03939;Parent=Cattle_Y_T01771;Dbxref=GeneID:112445380;Note=transfer RNA glutamic acid (anticodon UUC);anticodon=(pos:complement(5241130..5241132));gbkey=tRNA;gene=TRNAE-UUC;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Glu;gene_id=Cattle_Y_G01039;transcript_id=Cattle_Y_T01771;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=exon-TRNAE-UUC-153-1
haplotype2-0000357	CAT	gene	53322457	53366866	.	+	.	ID=Cattle_Y_G01040;Dbxref=BGD:BT21332,GeneID:785567,VGNC:VGNC:33092;Name=PNPLA4;description=patatin like phospholipase domain containing 4;gbkey=Gene;gene=PNPLA4;gene_biotype=protein_coding;gene_id=Cattle_Y_G01040;source_id=gene-PNPLA4-2
haplotype2-0000357	CAT	mRNA	53323905	53366866	.	+	.	ID=Cattle_Y_T01772;Parent=Cattle_Y_G01040;Dbxref=GeneID:785567,GenBank:NM_001080363.1,BGD:BT21332,VGNC:VGNC:33092;Name=NM_001080363.1;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=PNPLA4;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001080363.1;product=patatin like phospholipase domain containing 4;transcript_id=Cattle_Y_T01772;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001080363.1-2
haplotype2-0000357	CAT	exon	53323905	53323944	.	+	.	ID=Cattle_Y_E03940;Parent=Cattle_Y_T01772;Dbxref=GeneID:785567,GenBank:NM_001080363.1,BGD:BT21332,VGNC:VGNC:33092;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=PNPLA4;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001080363.1;product=patatin like phospholipase domain containing 4;transcript_id=Cattle_Y_T01772;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001080363.1-2-1
haplotype2-0000357	CAT	exon	53324706	53324820	.	+	.	ID=Cattle_Y_E03941;Parent=Cattle_Y_T01772;Dbxref=GeneID:785567,GenBank:NM_001080363.1,BGD:BT21332,VGNC:VGNC:33092;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=PNPLA4;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001080363.1;product=patatin like phospholipase domain containing 4;transcript_id=Cattle_Y_T01772;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001080363.1-2-2
haplotype2-0000357	CAT	exon	53326219	53326403	.	+	.	ID=Cattle_Y_E03942;Parent=Cattle_Y_T01772;Dbxref=GeneID:785567,GenBank:NM_001080363.1,BGD:BT21332,VGNC:VGNC:33092;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=PNPLA4;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001080363.1;product=patatin like phospholipase domain containing 4;transcript_id=Cattle_Y_T01772;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001080363.1-2-3
haplotype2-0000357	CAT	exon	53328634	53328728	.	+	.	ID=Cattle_Y_E03943;Parent=Cattle_Y_T01772;Dbxref=GeneID:785567,GenBank:NM_001080363.1,BGD:BT21332,VGNC:VGNC:33092;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=PNPLA4;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001080363.1;product=patatin like phospholipase domain containing 4;transcript_id=Cattle_Y_T01772;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001080363.1-2-1
haplotype2-0000357	CAT	exon	53330473	53330608	.	+	.	ID=Cattle_Y_E03944;Parent=Cattle_Y_T01772;Dbxref=GeneID:785567,GenBank:NM_001080363.1,BGD:BT21332,VGNC:VGNC:33092;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=PNPLA4;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001080363.1;product=patatin like phospholipase domain containing 4;transcript_id=Cattle_Y_T01772;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001080363.1-2-1
haplotype2-0000357	CAT	exon	53347780	53347845	.	+	.	ID=Cattle_Y_E03945;Parent=Cattle_Y_T01772;Dbxref=GeneID:785567,GenBank:NM_001080363.1,BGD:BT21332,VGNC:VGNC:33092;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=PNPLA4;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001080363.1;product=patatin like phospholipase domain containing 4;transcript_id=Cattle_Y_T01772;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001080363.1-2-1
haplotype2-0000357	CAT	exon	53364361	53364513	.	+	.	ID=Cattle_Y_E03946;Parent=Cattle_Y_T01772;Dbxref=GeneID:785567,GenBank:NM_001080363.1,BGD:BT21332,VGNC:VGNC:33092;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=PNPLA4;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001080363.1;product=patatin like phospholipase domain containing 4;transcript_id=Cattle_Y_T01772;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001080363.1-2-1
haplotype2-0000357	CAT	exon	53366663	53366866	.	+	.	ID=Cattle_Y_E03947;Parent=Cattle_Y_T01772;Dbxref=GeneID:785567,GenBank:NM_001080363.1,BGD:BT21332,VGNC:VGNC:33092;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=PNPLA4;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001080363.1;product=patatin like phospholipase domain containing 4;transcript_id=Cattle_Y_T01772;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001080363.1-2-8
haplotype2-0000357	CAT	CDS	53326224	53326403	.	+	0	ID=Cattle_Y_C03474;Parent=Cattle_Y_T01772;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01772;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53328634	53328728	.	+	0	ID=Cattle_Y_C03475;Parent=Cattle_Y_T01772;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01772;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53330473	53330608	.	+	1	ID=Cattle_Y_C03476;Parent=Cattle_Y_T01772;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01772;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53347780	53347845	.	+	0	ID=Cattle_Y_C03477;Parent=Cattle_Y_T01772;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01772;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53364361	53364513	.	+	0	ID=Cattle_Y_C03478;Parent=Cattle_Y_T01772;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01772;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53366663	53366794	.	+	0	ID=Cattle_Y_C03479;Parent=Cattle_Y_T01772;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01772;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	53323890	53366866	.	+	.	ID=Cattle_Y_T01773;Parent=Cattle_Y_G01040;Dbxref=GeneID:785567,GenBank:XM_059883995.1,BGD:BT21332,VGNC:VGNC:33092;Name=XM_059883995.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 8 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 11 samples with support for all annotated introns;product=patatin like phospholipase domain containing 4%2C transcript variant X1;transcript_id=Cattle_Y_T01773;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883995.1
haplotype2-0000357	CAT	exon	53323890	53324820	.	+	.	ID=Cattle_Y_E03948;Parent=Cattle_Y_T01773;Dbxref=GeneID:785567,GenBank:XM_059883995.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X1;transcript_id=Cattle_Y_T01773;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883995.1-1
haplotype2-0000357	CAT	exon	53326219	53326403	.	+	.	ID=Cattle_Y_E03949;Parent=Cattle_Y_T01773;Dbxref=GeneID:785567,GenBank:XM_059883995.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X1;transcript_id=Cattle_Y_T01773;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883995.1-2
haplotype2-0000357	CAT	exon	53328634	53328728	.	+	.	ID=Cattle_Y_E03950;Parent=Cattle_Y_T01773;Dbxref=GeneID:785567,GenBank:XM_059883995.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X1;transcript_id=Cattle_Y_T01773;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883995.1-1
haplotype2-0000357	CAT	exon	53330473	53330608	.	+	.	ID=Cattle_Y_E03951;Parent=Cattle_Y_T01773;Dbxref=GeneID:785567,GenBank:XM_059883995.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X1;transcript_id=Cattle_Y_T01773;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883995.1-1
haplotype2-0000357	CAT	exon	53347780	53347845	.	+	.	ID=Cattle_Y_E03952;Parent=Cattle_Y_T01773;Dbxref=GeneID:785567,GenBank:XM_059883995.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X1;transcript_id=Cattle_Y_T01773;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883995.1-1
haplotype2-0000357	CAT	exon	53364361	53364513	.	+	.	ID=Cattle_Y_E03953;Parent=Cattle_Y_T01773;Dbxref=GeneID:785567,GenBank:XM_059883995.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X1;transcript_id=Cattle_Y_T01773;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883995.1-1
haplotype2-0000357	CAT	exon	53366663	53366866	.	+	.	ID=Cattle_Y_E03954;Parent=Cattle_Y_T01773;Dbxref=GeneID:785567,GenBank:XM_059883995.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X1;transcript_id=Cattle_Y_T01773;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883995.1-7
haplotype2-0000357	CAT	CDS	53326224	53326403	.	+	0	ID=Cattle_Y_C03480;Parent=Cattle_Y_T01773;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01773;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53328634	53328728	.	+	0	ID=Cattle_Y_C03481;Parent=Cattle_Y_T01773;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01773;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53330473	53330608	.	+	1	ID=Cattle_Y_C03482;Parent=Cattle_Y_T01773;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01773;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53347780	53347845	.	+	0	ID=Cattle_Y_C03483;Parent=Cattle_Y_T01773;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01773;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53364361	53364513	.	+	0	ID=Cattle_Y_C03484;Parent=Cattle_Y_T01773;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01773;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53366663	53366794	.	+	0	ID=Cattle_Y_C03485;Parent=Cattle_Y_T01773;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01773;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	53323890	53366866	.	+	.	ID=Cattle_Y_T01774;Parent=Cattle_Y_G01040;Dbxref=GeneID:785567,GenBank:XM_059883996.1,BGD:BT21332,VGNC:VGNC:33092;Name=XM_059883996.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;model_evidence=Supporting evidence includes similarity to: 4 ESTs%2C 8 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 7 samples with support for all annotated introns;product=patatin like phospholipase domain containing 4%2C transcript variant X2;transcript_id=Cattle_Y_T01774;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883996.1
haplotype2-0000357	CAT	exon	53323890	53323948	.	+	.	ID=Cattle_Y_E03955;Parent=Cattle_Y_T01774;Dbxref=GeneID:785567,GenBank:XM_059883996.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X2;transcript_id=Cattle_Y_T01774;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883996.1-1
haplotype2-0000357	CAT	exon	53324706	53324820	.	+	.	ID=Cattle_Y_E03956;Parent=Cattle_Y_T01774;Dbxref=GeneID:785567,GenBank:XM_059883996.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X2;transcript_id=Cattle_Y_T01774;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883996.1-2
haplotype2-0000357	CAT	exon	53326219	53326403	.	+	.	ID=Cattle_Y_E03957;Parent=Cattle_Y_T01774;Dbxref=GeneID:785567,GenBank:XM_059883996.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X2;transcript_id=Cattle_Y_T01774;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883996.1-3
haplotype2-0000357	CAT	exon	53328634	53328728	.	+	.	ID=Cattle_Y_E03958;Parent=Cattle_Y_T01774;Dbxref=GeneID:785567,GenBank:XM_059883996.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X2;transcript_id=Cattle_Y_T01774;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883996.1-1
haplotype2-0000357	CAT	exon	53330473	53330608	.	+	.	ID=Cattle_Y_E03959;Parent=Cattle_Y_T01774;Dbxref=GeneID:785567,GenBank:XM_059883996.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X2;transcript_id=Cattle_Y_T01774;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883996.1-1
haplotype2-0000357	CAT	exon	53347780	53347845	.	+	.	ID=Cattle_Y_E03960;Parent=Cattle_Y_T01774;Dbxref=GeneID:785567,GenBank:XM_059883996.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X2;transcript_id=Cattle_Y_T01774;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883996.1-1
haplotype2-0000357	CAT	exon	53364361	53364513	.	+	.	ID=Cattle_Y_E03961;Parent=Cattle_Y_T01774;Dbxref=GeneID:785567,GenBank:XM_059883996.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X2;transcript_id=Cattle_Y_T01774;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883996.1-1
haplotype2-0000357	CAT	exon	53366663	53366866	.	+	.	ID=Cattle_Y_E03962;Parent=Cattle_Y_T01774;Dbxref=GeneID:785567,GenBank:XM_059883996.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X2;transcript_id=Cattle_Y_T01774;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883996.1-8
haplotype2-0000357	CAT	CDS	53326224	53326403	.	+	0	ID=Cattle_Y_C03486;Parent=Cattle_Y_T01774;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01774;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53328634	53328728	.	+	0	ID=Cattle_Y_C03487;Parent=Cattle_Y_T01774;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01774;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53330473	53330608	.	+	1	ID=Cattle_Y_C03488;Parent=Cattle_Y_T01774;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01774;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53347780	53347845	.	+	0	ID=Cattle_Y_C03489;Parent=Cattle_Y_T01774;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01774;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53364361	53364513	.	+	0	ID=Cattle_Y_C03490;Parent=Cattle_Y_T01774;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01774;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53366663	53366794	.	+	0	ID=Cattle_Y_C03491;Parent=Cattle_Y_T01774;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01774;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	53323890	53366866	.	+	.	ID=Cattle_Y_T01775;Parent=Cattle_Y_G01040;Dbxref=GeneID:785567,GenBank:XM_059883997.1,BGD:BT21332,VGNC:VGNC:33092;Name=XM_059883997.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;model_evidence=Supporting evidence includes similarity to: 2 ESTs%2C 8 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=patatin like phospholipase domain containing 4%2C transcript variant X3;transcript_id=Cattle_Y_T01775;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883997.1
haplotype2-0000357	CAT	exon	53323890	53323944	.	+	.	ID=Cattle_Y_E03963;Parent=Cattle_Y_T01775;Dbxref=GeneID:785567,GenBank:XM_059883997.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X3;transcript_id=Cattle_Y_T01775;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883997.1-1
haplotype2-0000357	CAT	exon	53326219	53326403	.	+	.	ID=Cattle_Y_E03964;Parent=Cattle_Y_T01775;Dbxref=GeneID:785567,GenBank:XM_059883997.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X3;transcript_id=Cattle_Y_T01775;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883997.1-2
haplotype2-0000357	CAT	exon	53328634	53328728	.	+	.	ID=Cattle_Y_E03965;Parent=Cattle_Y_T01775;Dbxref=GeneID:785567,GenBank:XM_059883997.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X3;transcript_id=Cattle_Y_T01775;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883997.1-1
haplotype2-0000357	CAT	exon	53330473	53330608	.	+	.	ID=Cattle_Y_E03966;Parent=Cattle_Y_T01775;Dbxref=GeneID:785567,GenBank:XM_059883997.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X3;transcript_id=Cattle_Y_T01775;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883997.1-1
haplotype2-0000357	CAT	exon	53347780	53347845	.	+	.	ID=Cattle_Y_E03967;Parent=Cattle_Y_T01775;Dbxref=GeneID:785567,GenBank:XM_059883997.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X3;transcript_id=Cattle_Y_T01775;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883997.1-1
haplotype2-0000357	CAT	exon	53364361	53364513	.	+	.	ID=Cattle_Y_E03968;Parent=Cattle_Y_T01775;Dbxref=GeneID:785567,GenBank:XM_059883997.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X3;transcript_id=Cattle_Y_T01775;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883997.1-1
haplotype2-0000357	CAT	exon	53366663	53366866	.	+	.	ID=Cattle_Y_E03969;Parent=Cattle_Y_T01775;Dbxref=GeneID:785567,GenBank:XM_059883997.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X3;transcript_id=Cattle_Y_T01775;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883997.1-7
haplotype2-0000357	CAT	CDS	53326224	53326403	.	+	0	ID=Cattle_Y_C03492;Parent=Cattle_Y_T01775;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01775;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53328634	53328728	.	+	0	ID=Cattle_Y_C03493;Parent=Cattle_Y_T01775;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01775;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53330473	53330608	.	+	1	ID=Cattle_Y_C03494;Parent=Cattle_Y_T01775;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01775;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53347780	53347845	.	+	0	ID=Cattle_Y_C03495;Parent=Cattle_Y_T01775;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01775;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53364361	53364513	.	+	0	ID=Cattle_Y_C03496;Parent=Cattle_Y_T01775;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01775;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53366663	53366794	.	+	0	ID=Cattle_Y_C03497;Parent=Cattle_Y_T01775;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01775;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	53322457	53366866	.	+	.	ID=Cattle_Y_T01776;Parent=Cattle_Y_G01040;Dbxref=GeneID:785567,GenBank:XM_059883998.1,BGD:BT21332,VGNC:VGNC:33092;Name=XM_059883998.1;gbkey=mRNA;gene=PNPLA4;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 8 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 8 samples with support for all annotated introns;product=patatin like phospholipase domain containing 4%2C transcript variant X4;transcript_id=Cattle_Y_T01776;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883998.1
haplotype2-0000357	CAT	exon	53322457	53323599	.	+	.	ID=Cattle_Y_E03970;Parent=Cattle_Y_T01776;Dbxref=GeneID:785567,GenBank:XM_059883998.1,BGD:BT21332,VGNC:VGNC:33092;gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X4;transcript_id=Cattle_Y_T01776;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883998.1-1
haplotype2-0000357	CAT	exon	53326219	53326403	.	+	.	ID=Cattle_Y_E03971;Parent=Cattle_Y_T01776;Dbxref=GeneID:785567,GenBank:XM_059883998.1,BGD:BT21332,VGNC:VGNC:33092;gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X4;transcript_id=Cattle_Y_T01776;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883998.1-2
haplotype2-0000357	CAT	exon	53328634	53328728	.	+	.	ID=Cattle_Y_E03972;Parent=Cattle_Y_T01776;Dbxref=GeneID:785567,GenBank:XM_059883998.1,BGD:BT21332,VGNC:VGNC:33092;gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X4;transcript_id=Cattle_Y_T01776;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883998.1-1
haplotype2-0000357	CAT	exon	53330473	53330608	.	+	.	ID=Cattle_Y_E03973;Parent=Cattle_Y_T01776;Dbxref=GeneID:785567,GenBank:XM_059883998.1,BGD:BT21332,VGNC:VGNC:33092;gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X4;transcript_id=Cattle_Y_T01776;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883998.1-1
haplotype2-0000357	CAT	exon	53347780	53347845	.	+	.	ID=Cattle_Y_E03974;Parent=Cattle_Y_T01776;Dbxref=GeneID:785567,GenBank:XM_059883998.1,BGD:BT21332,VGNC:VGNC:33092;gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X4;transcript_id=Cattle_Y_T01776;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883998.1-1
haplotype2-0000357	CAT	exon	53364361	53364513	.	+	.	ID=Cattle_Y_E03975;Parent=Cattle_Y_T01776;Dbxref=GeneID:785567,GenBank:XM_059883998.1,BGD:BT21332,VGNC:VGNC:33092;gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X4;transcript_id=Cattle_Y_T01776;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883998.1-1
haplotype2-0000357	CAT	exon	53366663	53366866	.	+	.	ID=Cattle_Y_E03976;Parent=Cattle_Y_T01776;Dbxref=GeneID:785567,GenBank:XM_059883998.1,BGD:BT21332,VGNC:VGNC:33092;gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X4;transcript_id=Cattle_Y_T01776;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883998.1-7
haplotype2-0000357	CAT	CDS	53326224	53326403	.	+	0	ID=Cattle_Y_C03498;Parent=Cattle_Y_T01776;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01776;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53328634	53328728	.	+	0	ID=Cattle_Y_C03499;Parent=Cattle_Y_T01776;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01776;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53330473	53330608	.	+	1	ID=Cattle_Y_C03500;Parent=Cattle_Y_T01776;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01776;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53347780	53347845	.	+	0	ID=Cattle_Y_C03501;Parent=Cattle_Y_T01776;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01776;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53364361	53364513	.	+	0	ID=Cattle_Y_C03502;Parent=Cattle_Y_T01776;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01776;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53366663	53366794	.	+	0	ID=Cattle_Y_C03503;Parent=Cattle_Y_T01776;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01776;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	53323890	53366866	.	+	.	ID=Cattle_Y_T01777;Parent=Cattle_Y_G01040;Dbxref=GeneID:785567,GenBank:XM_059883999.1,BGD:BT21332,VGNC:VGNC:33092;Name=XM_059883999.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 8 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=patatin like phospholipase domain containing 4%2C transcript variant X5;transcript_id=Cattle_Y_T01777;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883999.1
haplotype2-0000357	CAT	exon	53323890	53324820	.	+	.	ID=Cattle_Y_E03977;Parent=Cattle_Y_T01777;Dbxref=GeneID:785567,GenBank:XM_059883999.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X5;transcript_id=Cattle_Y_T01777;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883999.1-1
haplotype2-0000357	CAT	exon	53326223	53326403	.	+	.	ID=Cattle_Y_E03978;Parent=Cattle_Y_T01777;Dbxref=GeneID:785567,GenBank:XM_059883999.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X5;transcript_id=Cattle_Y_T01777;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883999.1-2
haplotype2-0000357	CAT	exon	53328634	53328728	.	+	.	ID=Cattle_Y_E03979;Parent=Cattle_Y_T01777;Dbxref=GeneID:785567,GenBank:XM_059883999.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X5;transcript_id=Cattle_Y_T01777;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883999.1-1
haplotype2-0000357	CAT	exon	53330473	53330608	.	+	.	ID=Cattle_Y_E03980;Parent=Cattle_Y_T01777;Dbxref=GeneID:785567,GenBank:XM_059883999.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X5;transcript_id=Cattle_Y_T01777;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883999.1-1
haplotype2-0000357	CAT	exon	53347780	53347845	.	+	.	ID=Cattle_Y_E03981;Parent=Cattle_Y_T01777;Dbxref=GeneID:785567,GenBank:XM_059883999.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X5;transcript_id=Cattle_Y_T01777;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883999.1-1
haplotype2-0000357	CAT	exon	53364361	53364513	.	+	.	ID=Cattle_Y_E03982;Parent=Cattle_Y_T01777;Dbxref=GeneID:785567,GenBank:XM_059883999.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X5;transcript_id=Cattle_Y_T01777;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883999.1-1
haplotype2-0000357	CAT	exon	53366663	53366866	.	+	.	ID=Cattle_Y_E03983;Parent=Cattle_Y_T01777;Dbxref=GeneID:785567,GenBank:XM_059883999.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X5;transcript_id=Cattle_Y_T01777;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883999.1-7
haplotype2-0000357	CAT	CDS	53326224	53326403	.	+	0	ID=Cattle_Y_C03504;Parent=Cattle_Y_T01777;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01777;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53328634	53328728	.	+	0	ID=Cattle_Y_C03505;Parent=Cattle_Y_T01777;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01777;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53330473	53330608	.	+	1	ID=Cattle_Y_C03506;Parent=Cattle_Y_T01777;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01777;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53347780	53347845	.	+	0	ID=Cattle_Y_C03507;Parent=Cattle_Y_T01777;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01777;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53364361	53364513	.	+	0	ID=Cattle_Y_C03508;Parent=Cattle_Y_T01777;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01777;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53366663	53366794	.	+	0	ID=Cattle_Y_C03509;Parent=Cattle_Y_T01777;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01777;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	53323890	53366866	.	+	.	ID=Cattle_Y_T01778;Parent=Cattle_Y_G01040;Dbxref=GeneID:785567,GenBank:XM_059884000.1,BGD:BT21332,VGNC:VGNC:33092;Name=XM_059884000.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 1 sample with support for all annotated introns;product=patatin like phospholipase domain containing 4%2C transcript variant X6;transcript_id=Cattle_Y_T01778;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884000.1
haplotype2-0000357	CAT	exon	53323890	53324820	.	+	.	ID=Cattle_Y_E03984;Parent=Cattle_Y_T01778;Dbxref=GeneID:785567,GenBank:XM_059884000.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X6;transcript_id=Cattle_Y_T01778;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884000.1-1
haplotype2-0000357	CAT	exon	53326219	53326403	.	+	.	ID=Cattle_Y_E03985;Parent=Cattle_Y_T01778;Dbxref=GeneID:785567,GenBank:XM_059884000.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X6;transcript_id=Cattle_Y_T01778;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884000.1-2
haplotype2-0000357	CAT	exon	53328634	53328728	.	+	.	ID=Cattle_Y_E03986;Parent=Cattle_Y_T01778;Dbxref=GeneID:785567,GenBank:XM_059884000.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X6;transcript_id=Cattle_Y_T01778;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884000.1-1
haplotype2-0000357	CAT	exon	53330473	53330608	.	+	.	ID=Cattle_Y_E03987;Parent=Cattle_Y_T01778;Dbxref=GeneID:785567,GenBank:XM_059884000.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X6;transcript_id=Cattle_Y_T01778;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884000.1-1
haplotype2-0000357	CAT	exon	53364361	53364513	.	+	.	ID=Cattle_Y_E03988;Parent=Cattle_Y_T01778;Dbxref=GeneID:785567,GenBank:XM_059884000.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X6;transcript_id=Cattle_Y_T01778;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884000.1-1
haplotype2-0000357	CAT	exon	53366663	53366866	.	+	.	ID=Cattle_Y_E03989;Parent=Cattle_Y_T01778;Dbxref=GeneID:785567,GenBank:XM_059884000.1,BGD:BT21332,VGNC:VGNC:33092;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PNPLA4;product=patatin like phospholipase domain containing 4, transcript variant X6;transcript_id=Cattle_Y_T01778;gene_id=Cattle_Y_G01040;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884000.1-6
haplotype2-0000357	CAT	CDS	53326224	53326403	.	+	0	ID=Cattle_Y_C03510;Parent=Cattle_Y_T01778;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01778;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53328634	53328728	.	+	0	ID=Cattle_Y_C03511;Parent=Cattle_Y_T01778;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01778;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53330473	53330608	.	+	1	ID=Cattle_Y_C03512;Parent=Cattle_Y_T01778;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01778;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53364361	53364513	.	+	0	ID=Cattle_Y_C03513;Parent=Cattle_Y_T01778;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01778;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53366663	53366794	.	+	0	ID=Cattle_Y_C03514;Parent=Cattle_Y_T01778;gene_id=Cattle_Y_G01040;transcript_id=Cattle_Y_T01778;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	53654013	53654086	.	+	.	ID=Cattle_Y_G01041;Dbxref=GeneID:132344724;Name=TRNAC-ACA;description=transfer RNA cysteine (anticodon ACA);gbkey=Gene;gene=TRNAC-ACA;gene_biotype=tRNA;gene_id=Cattle_Y_G01041;source_id=gene-TRNAC-ACA-248
haplotype2-0000357	CAT	tRNA	53654013	53654086	.	+	.	ID=Cattle_Y_T01779;Parent=Cattle_Y_G01041;Dbxref=GeneID:132344724;Note=transfer RNA cysteine (anticodon ACA);anticodon=(pos:complement(4877366..4877368));gbkey=tRNA;gene=TRNAC-ACA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Cys;gene_id=Cattle_Y_G01041;transcript_id=Cattle_Y_T01779;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=rna-TRNAC-ACA-248
haplotype2-0000357	CAT	exon	53654013	53654086	.	+	.	ID=Cattle_Y_E03990;Parent=Cattle_Y_T01779;Dbxref=GeneID:132344724;Note=transfer RNA cysteine (anticodon ACA);anticodon=(pos:complement(4877366..4877368));gbkey=tRNA;gene=TRNAC-ACA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Cys;gene_id=Cattle_Y_G01041;transcript_id=Cattle_Y_T01779;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=exon-TRNAC-ACA-248-1
haplotype2-0000357	CAT	gene	53782026	53782098	.	-	.	ID=Cattle_Y_G01042;Dbxref=GeneID:132344399;Name=TRNAC-ACA;description=transfer RNA cysteine (anticodon ACA);gbkey=Gene;gene=TRNAC-ACA;gene_biotype=tRNA;gene_id=Cattle_Y_G01042;source_id=gene-TRNAC-ACA-247
haplotype2-0000357	CAT	tRNA	53782026	53782098	.	-	.	ID=Cattle_Y_T01780;Parent=Cattle_Y_G01042;Dbxref=GeneID:132344399;Note=transfer RNA cysteine (anticodon ACA);anticodon=(pos:2201605..2201607);gbkey=tRNA;gene=TRNAC-ACA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Cys;gene_id=Cattle_Y_G01042;transcript_id=Cattle_Y_T01780;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=rna-TRNAC-ACA-247
haplotype2-0000357	CAT	exon	53782026	53782098	.	-	.	ID=Cattle_Y_E03991;Parent=Cattle_Y_T01780;Dbxref=GeneID:132344399;Note=transfer RNA cysteine (anticodon ACA);anticodon=(pos:2201605..2201607);gbkey=tRNA;gene=TRNAC-ACA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Cys;gene_id=Cattle_Y_G01042;transcript_id=Cattle_Y_T01780;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=exon-TRNAC-ACA-247-1
haplotype2-0000357	CAT	gene	53788105	53788211	.	+	.	ID=Cattle_Y_G01043;Dbxref=GeneID:112445226;Name=LOC112445226;description=U6 spliceosomal RNA;gbkey=Gene;gene=LOC112445226;gene_biotype=snRNA;gene_id=Cattle_Y_G01043;source_id=gene-LOC112445226-2
haplotype2-0000357	CAT	snRNA	53788105	53788211	.	+	.	ID=Cattle_Y_T01781;Parent=Cattle_Y_G01043;Dbxref=GeneID:112445226,RFAM:RF00026,GenBank:XR_009493666.1;Name=XR_009493666.1;gbkey=ncRNA;gene=LOC112445226;inference=COORDINATES: profile:INFERNAL:1.1.4;product=U6 spliceosomal RNA;transcript_id=Cattle_Y_T01781;gene_id=Cattle_Y_G01043;gene_biotype=snRNA;transcript_biotype=snRNA;source_id=rna-XR_009493666.1
haplotype2-0000357	CAT	exon	53788105	53788211	.	+	.	ID=Cattle_Y_E03992;Parent=Cattle_Y_T01781;Dbxref=GeneID:112445226,RFAM:RF00026,GenBank:XR_009493666.1;gbkey=ncRNA;gene=LOC112445226;inference=COORDINATES: profile:INFERNAL:1.1.4;product=U6 spliceosomal RNA;transcript_id=Cattle_Y_T01781;gene_id=Cattle_Y_G01043;gene_biotype=snRNA;transcript_biotype=snRNA;source_id=exon-XR_009493666.1-1
haplotype2-0000357	CAT	gene	53876502	54037145	.	-	.	ID=Cattle_Y_G01044;Dbxref=BGD:BT10237,GeneID:509206,VGNC:VGNC:49976;Name=STS;description=steroid sulfatase;gbkey=Gene;gene=STS;gene_biotype=protein_coding;gene_synonym=ASC;gene_id=Cattle_Y_G01044;source_id=gene-STS-2
haplotype2-0000357	CAT	mRNA	53876502	54013004	.	-	.	ID=Cattle_Y_T01782;Parent=Cattle_Y_G01044;Dbxref=GeneID:509206,GenBank:NM_001075394.2,BGD:BT10237,VGNC:VGNC:49976;Name=NM_001075394.2;Note=The RefSeq transcript has 7 substitutions%2C 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=STS;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001075394.2;product=steroid sulfatase;transcript_id=Cattle_Y_T01782;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001075394.2-2
haplotype2-0000357	CAT	exon	53876502	53877120	.	-	.	ID=Cattle_Y_E03993;Parent=Cattle_Y_T01782;Dbxref=GeneID:509206,GenBank:NM_001075394.2,BGD:BT10237,VGNC:VGNC:49976;Note=The RefSeq transcript has 7 substitutions, 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=STS;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001075394.2;product=steroid sulfatase;transcript_id=Cattle_Y_T01782;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001075394.2-2-10
haplotype2-0000357	CAT	exon	53888125	53888246	.	-	.	ID=Cattle_Y_E03994;Parent=Cattle_Y_T01782;Dbxref=GeneID:509206,GenBank:NM_001075394.2,BGD:BT10237,VGNC:VGNC:49976;Note=The RefSeq transcript has 7 substitutions, 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=STS;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001075394.2;product=steroid sulfatase;transcript_id=Cattle_Y_T01782;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001075394.2-2-10
haplotype2-0000357	CAT	exon	53902265	53902424	.	-	.	ID=Cattle_Y_E03995;Parent=Cattle_Y_T01782;Dbxref=GeneID:509206,GenBank:NM_001075394.2,BGD:BT10237,VGNC:VGNC:49976;Note=The RefSeq transcript has 7 substitutions, 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=STS;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001075394.2;product=steroid sulfatase;transcript_id=Cattle_Y_T01782;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001075394.2-2-10
haplotype2-0000357	CAT	exon	53915239	53915376	.	-	.	ID=Cattle_Y_E03996;Parent=Cattle_Y_T01782;Dbxref=GeneID:509206,GenBank:NM_001075394.2,BGD:BT10237,VGNC:VGNC:49976;Note=The RefSeq transcript has 7 substitutions, 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=STS;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001075394.2;product=steroid sulfatase;transcript_id=Cattle_Y_T01782;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001075394.2-2-10
haplotype2-0000357	CAT	exon	53942033	53942169	.	-	.	ID=Cattle_Y_E03997;Parent=Cattle_Y_T01782;Dbxref=GeneID:509206,GenBank:NM_001075394.2,BGD:BT10237,VGNC:VGNC:49976;Note=The RefSeq transcript has 7 substitutions, 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=STS;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001075394.2;product=steroid sulfatase;transcript_id=Cattle_Y_T01782;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001075394.2-2-10
haplotype2-0000357	CAT	exon	53951476	53951899	.	-	.	ID=Cattle_Y_E03998;Parent=Cattle_Y_T01782;Dbxref=GeneID:509206,GenBank:NM_001075394.2,BGD:BT10237,VGNC:VGNC:49976;Note=The RefSeq transcript has 7 substitutions, 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=STS;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001075394.2;product=steroid sulfatase;transcript_id=Cattle_Y_T01782;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001075394.2-2-10
haplotype2-0000357	CAT	exon	53957961	53958083	.	-	.	ID=Cattle_Y_E03999;Parent=Cattle_Y_T01782;Dbxref=GeneID:509206,GenBank:NM_001075394.2,BGD:BT10237,VGNC:VGNC:49976;Note=The RefSeq transcript has 7 substitutions, 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=STS;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001075394.2;product=steroid sulfatase;transcript_id=Cattle_Y_T01782;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001075394.2-2-10
haplotype2-0000357	CAT	exon	53958188	53958309	.	-	.	ID=Cattle_Y_E04000;Parent=Cattle_Y_T01782;Dbxref=GeneID:509206,GenBank:NM_001075394.2,BGD:BT10237,VGNC:VGNC:49976;Note=The RefSeq transcript has 7 substitutions, 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=STS;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001075394.2;product=steroid sulfatase;transcript_id=Cattle_Y_T01782;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001075394.2-2-10
haplotype2-0000357	CAT	exon	53961307	53961447	.	-	.	ID=Cattle_Y_E04001;Parent=Cattle_Y_T01782;Dbxref=GeneID:509206,GenBank:NM_001075394.2,BGD:BT10237,VGNC:VGNC:49976;Note=The RefSeq transcript has 7 substitutions, 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=STS;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001075394.2;product=steroid sulfatase;transcript_id=Cattle_Y_T01782;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001075394.2-2-2
haplotype2-0000357	CAT	exon	54012776	54013004	.	-	.	ID=Cattle_Y_E04002;Parent=Cattle_Y_T01782;Dbxref=GeneID:509206,GenBank:NM_001075394.2,BGD:BT10237,VGNC:VGNC:49976;Note=The RefSeq transcript has 7 substitutions, 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=STS;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001075394.2;product=steroid sulfatase;transcript_id=Cattle_Y_T01782;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001075394.2-2-1
haplotype2-0000357	CAT	CDS	53876747	53877120	.	-	2	ID=Cattle_Y_C03515;Parent=Cattle_Y_T01782;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01782;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53888125	53888246	.	-	1	ID=Cattle_Y_C03516;Parent=Cattle_Y_T01782;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01782;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53902265	53902424	.	-	2	ID=Cattle_Y_C03517;Parent=Cattle_Y_T01782;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01782;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53915239	53915376	.	-	2	ID=Cattle_Y_C03518;Parent=Cattle_Y_T01782;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01782;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53942033	53942169	.	-	1	ID=Cattle_Y_C03519;Parent=Cattle_Y_T01782;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01782;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53951476	53951899	.	-	2	ID=Cattle_Y_C03520;Parent=Cattle_Y_T01782;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01782;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53957961	53958083	.	-	2	ID=Cattle_Y_C03521;Parent=Cattle_Y_T01782;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01782;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53958188	53958309	.	-	1	ID=Cattle_Y_C03522;Parent=Cattle_Y_T01782;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01782;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53961307	53961443	.	-	0	ID=Cattle_Y_C03523;Parent=Cattle_Y_T01782;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01782;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	53876502	54037145	.	-	.	ID=Cattle_Y_T01783;Parent=Cattle_Y_G01044;Dbxref=GeneID:509206,GenBank:XM_024987847.2,BGD:BT10237,VGNC:VGNC:49976;Name=XM_024987847.2;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=STS;model_evidence=Supporting evidence includes similarity to: 2 mRNAs%2C 3 ESTs%2C 14 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=steroid sulfatase%2C transcript variant X1;transcript_id=Cattle_Y_T01783;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_024987847.2
haplotype2-0000357	CAT	exon	53876502	53877120	.	-	.	ID=Cattle_Y_E04003;Parent=Cattle_Y_T01783;Dbxref=GeneID:509206,GenBank:XM_024987847.2,BGD:BT10237,VGNC:VGNC:49976;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=STS;product=steroid sulfatase, transcript variant X1;transcript_id=Cattle_Y_T01783;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987847.2-11
haplotype2-0000357	CAT	exon	53888125	53888246	.	-	.	ID=Cattle_Y_E04004;Parent=Cattle_Y_T01783;Dbxref=GeneID:509206,GenBank:XM_024987847.2,BGD:BT10237,VGNC:VGNC:49976;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=STS;product=steroid sulfatase, transcript variant X1;transcript_id=Cattle_Y_T01783;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987847.2-11
haplotype2-0000357	CAT	exon	53902265	53902424	.	-	.	ID=Cattle_Y_E04005;Parent=Cattle_Y_T01783;Dbxref=GeneID:509206,GenBank:XM_024987847.2,BGD:BT10237,VGNC:VGNC:49976;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=STS;product=steroid sulfatase, transcript variant X1;transcript_id=Cattle_Y_T01783;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987847.2-11
haplotype2-0000357	CAT	exon	53915239	53915376	.	-	.	ID=Cattle_Y_E04006;Parent=Cattle_Y_T01783;Dbxref=GeneID:509206,GenBank:XM_024987847.2,BGD:BT10237,VGNC:VGNC:49976;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=STS;product=steroid sulfatase, transcript variant X1;transcript_id=Cattle_Y_T01783;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987847.2-11
haplotype2-0000357	CAT	exon	53942033	53942169	.	-	.	ID=Cattle_Y_E04007;Parent=Cattle_Y_T01783;Dbxref=GeneID:509206,GenBank:XM_024987847.2,BGD:BT10237,VGNC:VGNC:49976;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=STS;product=steroid sulfatase, transcript variant X1;transcript_id=Cattle_Y_T01783;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987847.2-11
haplotype2-0000357	CAT	exon	53951476	53951899	.	-	.	ID=Cattle_Y_E04008;Parent=Cattle_Y_T01783;Dbxref=GeneID:509206,GenBank:XM_024987847.2,BGD:BT10237,VGNC:VGNC:49976;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=STS;product=steroid sulfatase, transcript variant X1;transcript_id=Cattle_Y_T01783;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987847.2-11
haplotype2-0000357	CAT	exon	53957961	53958083	.	-	.	ID=Cattle_Y_E04009;Parent=Cattle_Y_T01783;Dbxref=GeneID:509206,GenBank:XM_024987847.2,BGD:BT10237,VGNC:VGNC:49976;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=STS;product=steroid sulfatase, transcript variant X1;transcript_id=Cattle_Y_T01783;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987847.2-11
haplotype2-0000357	CAT	exon	53958188	53958309	.	-	.	ID=Cattle_Y_E04010;Parent=Cattle_Y_T01783;Dbxref=GeneID:509206,GenBank:XM_024987847.2,BGD:BT10237,VGNC:VGNC:49976;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=STS;product=steroid sulfatase, transcript variant X1;transcript_id=Cattle_Y_T01783;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987847.2-11
haplotype2-0000357	CAT	exon	53961307	53961447	.	-	.	ID=Cattle_Y_E04011;Parent=Cattle_Y_T01783;Dbxref=GeneID:509206,GenBank:XM_024987847.2,BGD:BT10237,VGNC:VGNC:49976;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=STS;product=steroid sulfatase, transcript variant X1;transcript_id=Cattle_Y_T01783;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987847.2-11
haplotype2-0000357	CAT	exon	54020722	54020894	.	-	.	ID=Cattle_Y_E04012;Parent=Cattle_Y_T01783;Dbxref=GeneID:509206,GenBank:XM_024987847.2,BGD:BT10237,VGNC:VGNC:49976;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=STS;product=steroid sulfatase, transcript variant X1;transcript_id=Cattle_Y_T01783;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987847.2-2
haplotype2-0000357	CAT	exon	54036855	54037145	.	-	.	ID=Cattle_Y_E04013;Parent=Cattle_Y_T01783;Dbxref=GeneID:509206,GenBank:XM_024987847.2,BGD:BT10237,VGNC:VGNC:49976;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=STS;product=steroid sulfatase, transcript variant X1;transcript_id=Cattle_Y_T01783;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987847.2-1
haplotype2-0000357	CAT	CDS	53876747	53877120	.	-	2	ID=Cattle_Y_C03524;Parent=Cattle_Y_T01783;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01783;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53888125	53888246	.	-	1	ID=Cattle_Y_C03525;Parent=Cattle_Y_T01783;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01783;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53902265	53902424	.	-	2	ID=Cattle_Y_C03526;Parent=Cattle_Y_T01783;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01783;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53915239	53915376	.	-	2	ID=Cattle_Y_C03527;Parent=Cattle_Y_T01783;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01783;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53942033	53942169	.	-	1	ID=Cattle_Y_C03528;Parent=Cattle_Y_T01783;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01783;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53951476	53951899	.	-	2	ID=Cattle_Y_C03529;Parent=Cattle_Y_T01783;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01783;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53957961	53958083	.	-	2	ID=Cattle_Y_C03530;Parent=Cattle_Y_T01783;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01783;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53958188	53958309	.	-	1	ID=Cattle_Y_C03531;Parent=Cattle_Y_T01783;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01783;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53961307	53961447	.	-	1	ID=Cattle_Y_C03532;Parent=Cattle_Y_T01783;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01783;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	54020722	54020738	.	-	0	ID=Cattle_Y_C03533;Parent=Cattle_Y_T01783;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01783;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	53876502	54036039	.	-	.	ID=Cattle_Y_T01784;Parent=Cattle_Y_G01044;Dbxref=GeneID:509206,GenBank:XM_024987848.2,BGD:BT10237,VGNC:VGNC:49976;Name=XM_024987848.2;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=STS;model_evidence=Supporting evidence includes similarity to: 2 mRNAs%2C 3 ESTs%2C 14 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=steroid sulfatase%2C transcript variant X2;transcript_id=Cattle_Y_T01784;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_024987848.2
haplotype2-0000357	CAT	exon	53876502	53877120	.	-	.	ID=Cattle_Y_E04014;Parent=Cattle_Y_T01784;Dbxref=GeneID:509206,GenBank:XM_024987848.2,BGD:BT10237,VGNC:VGNC:49976;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=STS;product=steroid sulfatase, transcript variant X2;transcript_id=Cattle_Y_T01784;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987848.2-11
haplotype2-0000357	CAT	exon	53888125	53888246	.	-	.	ID=Cattle_Y_E04015;Parent=Cattle_Y_T01784;Dbxref=GeneID:509206,GenBank:XM_024987848.2,BGD:BT10237,VGNC:VGNC:49976;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=STS;product=steroid sulfatase, transcript variant X2;transcript_id=Cattle_Y_T01784;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987848.2-11
haplotype2-0000357	CAT	exon	53902265	53902424	.	-	.	ID=Cattle_Y_E04016;Parent=Cattle_Y_T01784;Dbxref=GeneID:509206,GenBank:XM_024987848.2,BGD:BT10237,VGNC:VGNC:49976;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=STS;product=steroid sulfatase, transcript variant X2;transcript_id=Cattle_Y_T01784;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987848.2-11
haplotype2-0000357	CAT	exon	53915239	53915376	.	-	.	ID=Cattle_Y_E04017;Parent=Cattle_Y_T01784;Dbxref=GeneID:509206,GenBank:XM_024987848.2,BGD:BT10237,VGNC:VGNC:49976;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=STS;product=steroid sulfatase, transcript variant X2;transcript_id=Cattle_Y_T01784;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987848.2-11
haplotype2-0000357	CAT	exon	53942033	53942169	.	-	.	ID=Cattle_Y_E04018;Parent=Cattle_Y_T01784;Dbxref=GeneID:509206,GenBank:XM_024987848.2,BGD:BT10237,VGNC:VGNC:49976;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=STS;product=steroid sulfatase, transcript variant X2;transcript_id=Cattle_Y_T01784;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987848.2-11
haplotype2-0000357	CAT	exon	53951476	53951899	.	-	.	ID=Cattle_Y_E04019;Parent=Cattle_Y_T01784;Dbxref=GeneID:509206,GenBank:XM_024987848.2,BGD:BT10237,VGNC:VGNC:49976;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=STS;product=steroid sulfatase, transcript variant X2;transcript_id=Cattle_Y_T01784;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987848.2-11
haplotype2-0000357	CAT	exon	53957961	53958083	.	-	.	ID=Cattle_Y_E04020;Parent=Cattle_Y_T01784;Dbxref=GeneID:509206,GenBank:XM_024987848.2,BGD:BT10237,VGNC:VGNC:49976;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=STS;product=steroid sulfatase, transcript variant X2;transcript_id=Cattle_Y_T01784;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987848.2-11
haplotype2-0000357	CAT	exon	53958188	53958309	.	-	.	ID=Cattle_Y_E04021;Parent=Cattle_Y_T01784;Dbxref=GeneID:509206,GenBank:XM_024987848.2,BGD:BT10237,VGNC:VGNC:49976;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=STS;product=steroid sulfatase, transcript variant X2;transcript_id=Cattle_Y_T01784;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987848.2-11
haplotype2-0000357	CAT	exon	53961307	53961447	.	-	.	ID=Cattle_Y_E04022;Parent=Cattle_Y_T01784;Dbxref=GeneID:509206,GenBank:XM_024987848.2,BGD:BT10237,VGNC:VGNC:49976;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=STS;product=steroid sulfatase, transcript variant X2;transcript_id=Cattle_Y_T01784;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987848.2-11
haplotype2-0000357	CAT	exon	54020722	54020894	.	-	.	ID=Cattle_Y_E04023;Parent=Cattle_Y_T01784;Dbxref=GeneID:509206,GenBank:XM_024987848.2,BGD:BT10237,VGNC:VGNC:49976;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=STS;product=steroid sulfatase, transcript variant X2;transcript_id=Cattle_Y_T01784;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987848.2-2
haplotype2-0000357	CAT	exon	54030424	54036039	.	-	.	ID=Cattle_Y_E04024;Parent=Cattle_Y_T01784;Dbxref=GeneID:509206,GenBank:XM_024987848.2,BGD:BT10237,VGNC:VGNC:49976;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=STS;product=steroid sulfatase, transcript variant X2;transcript_id=Cattle_Y_T01784;gene_id=Cattle_Y_G01044;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024987848.2-1
haplotype2-0000357	CAT	CDS	53876747	53877120	.	-	2	ID=Cattle_Y_C03534;Parent=Cattle_Y_T01784;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01784;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53888125	53888246	.	-	1	ID=Cattle_Y_C03535;Parent=Cattle_Y_T01784;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01784;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53902265	53902424	.	-	2	ID=Cattle_Y_C03536;Parent=Cattle_Y_T01784;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01784;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53915239	53915376	.	-	2	ID=Cattle_Y_C03537;Parent=Cattle_Y_T01784;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01784;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53942033	53942169	.	-	1	ID=Cattle_Y_C03538;Parent=Cattle_Y_T01784;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01784;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53951476	53951899	.	-	2	ID=Cattle_Y_C03539;Parent=Cattle_Y_T01784;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01784;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53957961	53958083	.	-	2	ID=Cattle_Y_C03540;Parent=Cattle_Y_T01784;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01784;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53958188	53958309	.	-	1	ID=Cattle_Y_C03541;Parent=Cattle_Y_T01784;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01784;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	53961307	53961447	.	-	1	ID=Cattle_Y_C03542;Parent=Cattle_Y_T01784;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01784;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	54020722	54020738	.	-	0	ID=Cattle_Y_C03543;Parent=Cattle_Y_T01784;gene_id=Cattle_Y_G01044;transcript_id=Cattle_Y_T01784;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	54036392	54102451	.	+	.	ID=Cattle_Y_G01045;Dbxref=GeneID:617253,VGNC:VGNC:33568;Name=PUDP;description=pseudouridine 5'-phosphatase;gbkey=Gene;gene=PUDP;gene_biotype=protein_coding;gene_synonym=HDHD1,HDHD1A;gene_id=Cattle_Y_G01045;source_id=gene-PUDP-2
haplotype2-0000357	CAT	mRNA	54036392	54102451	.	+	.	ID=Cattle_Y_T01785;Parent=Cattle_Y_G01045;Dbxref=GeneID:617253,GenBank:NM_001046595.2,VGNC:VGNC:33568;Name=NM_001046595.2;Note=The RefSeq transcript has 5 substitutions%2C 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=PUDP;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001046595.2;product=pseudouridine 5'-phosphatase;transcript_id=Cattle_Y_T01785;gene_id=Cattle_Y_G01045;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001046595.2-2
haplotype2-0000357	CAT	exon	54036392	54036482	.	+	.	ID=Cattle_Y_E04025;Parent=Cattle_Y_T01785;Dbxref=GeneID:617253,GenBank:NM_001046595.2,VGNC:VGNC:33568;Note=The RefSeq transcript has 5 substitutions, 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=PUDP;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001046595.2;product=pseudouridine 5'-phosphatase;transcript_id=Cattle_Y_T01785;gene_id=Cattle_Y_G01045;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001046595.2-2-1
haplotype2-0000357	CAT	exon	54066951	54067169	.	+	.	ID=Cattle_Y_E04026;Parent=Cattle_Y_T01785;Dbxref=GeneID:617253,GenBank:NM_001046595.2,VGNC:VGNC:33568;Note=The RefSeq transcript has 5 substitutions, 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=PUDP;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001046595.2;product=pseudouridine 5'-phosphatase;transcript_id=Cattle_Y_T01785;gene_id=Cattle_Y_G01045;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001046595.2-2-2
haplotype2-0000357	CAT	exon	54083455	54083684	.	+	.	ID=Cattle_Y_E04027;Parent=Cattle_Y_T01785;Dbxref=GeneID:617253,GenBank:NM_001046595.2,VGNC:VGNC:33568;Note=The RefSeq transcript has 5 substitutions, 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=PUDP;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001046595.2;product=pseudouridine 5'-phosphatase;transcript_id=Cattle_Y_T01785;gene_id=Cattle_Y_G01045;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001046595.2-2-3
haplotype2-0000357	CAT	exon	54100985	54102451	.	+	.	ID=Cattle_Y_E04028;Parent=Cattle_Y_T01785;Dbxref=GeneID:617253,GenBank:NM_001046595.2,VGNC:VGNC:33568;Note=The RefSeq transcript has 5 substitutions, 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=PUDP;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001046595.2;product=pseudouridine 5'-phosphatase;transcript_id=Cattle_Y_T01785;gene_id=Cattle_Y_G01045;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001046595.2-2-4
haplotype2-0000357	CAT	CDS	54036413	54036482	.	+	0	ID=Cattle_Y_C03544;Parent=Cattle_Y_T01785;Dbxref=GeneID:617253,GenBank:NP_001040060.1,VGNC:VGNC:33568;Name=NP_001040060.1;gbkey=CDS;gene=PUDP;product=pseudouridine-5'-phosphatase;protein_id=NP_001040060.1;gene_id=Cattle_Y_G01045;transcript_id=Cattle_Y_T01785;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	54066951	54067169	.	+	2	ID=Cattle_Y_C03545;Parent=Cattle_Y_T01785;Dbxref=GeneID:617253,GenBank:NP_001040060.1,VGNC:VGNC:33568;Name=NP_001040060.1;gbkey=CDS;gene=PUDP;product=pseudouridine-5'-phosphatase;protein_id=NP_001040060.1;gene_id=Cattle_Y_G01045;transcript_id=Cattle_Y_T01785;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	54083455	54083684	.	+	2	ID=Cattle_Y_C03546;Parent=Cattle_Y_T01785;Dbxref=GeneID:617253,GenBank:NP_001040060.1,VGNC:VGNC:33568;Name=NP_001040060.1;gbkey=CDS;gene=PUDP;product=pseudouridine-5'-phosphatase;protein_id=NP_001040060.1;gene_id=Cattle_Y_G01045;transcript_id=Cattle_Y_T01785;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	54100985	54101161	.	+	0	ID=Cattle_Y_C03547;Parent=Cattle_Y_T01785;Dbxref=GeneID:617253,GenBank:NP_001040060.1,VGNC:VGNC:33568;Name=NP_001040060.1;gbkey=CDS;gene=PUDP;product=pseudouridine-5'-phosphatase;protein_id=NP_001040060.1;gene_id=Cattle_Y_G01045;transcript_id=Cattle_Y_T01785;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	54290920	54437535	.	+	.	ID=Cattle_Y_G01046;Dbxref=GeneID:100847628;Name=LOC100847628;description=uncharacterized LOC100847628;gbkey=Gene;gene=LOC100847628;gene_biotype=lncRNA;gene_id=Cattle_Y_G01046;source_id=gene-LOC100847628-2
haplotype2-0000357	CAT	lnc_RNA	54290920	54437535	.	+	.	ID=Cattle_Y_T01786;Parent=Cattle_Y_G01046;Dbxref=GeneID:100847628,GenBank:XR_009493657.1;Name=XR_009493657.1;gbkey=ncRNA;gene=LOC100847628;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01786;gene_id=Cattle_Y_G01046;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=rna-XR_009493657.1
haplotype2-0000357	CAT	exon	54290920	54291103	.	+	.	ID=Cattle_Y_E04029;Parent=Cattle_Y_T01786;Dbxref=GeneID:100847628,GenBank:XR_009493657.1;gbkey=ncRNA;gene=LOC100847628;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01786;gene_id=Cattle_Y_G01046;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493657.1-1
haplotype2-0000357	CAT	exon	54337556	54337760	.	+	.	ID=Cattle_Y_E04030;Parent=Cattle_Y_T01786;Dbxref=GeneID:100847628,GenBank:XR_009493657.1;gbkey=ncRNA;gene=LOC100847628;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01786;gene_id=Cattle_Y_G01046;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493657.1-2
haplotype2-0000357	CAT	exon	54343744	54343888	.	+	.	ID=Cattle_Y_E04031;Parent=Cattle_Y_T01786;Dbxref=GeneID:100847628,GenBank:XR_009493657.1;gbkey=ncRNA;gene=LOC100847628;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01786;gene_id=Cattle_Y_G01046;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493657.1-3
haplotype2-0000357	CAT	exon	54437175	54437535	.	+	.	ID=Cattle_Y_E04032;Parent=Cattle_Y_T01786;Dbxref=GeneID:100847628,GenBank:XR_009493657.1;gbkey=ncRNA;gene=LOC100847628;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01786;gene_id=Cattle_Y_G01046;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493657.1-4
haplotype2-0000357	CAT	gene	54429834	54429906	.	+	.	ID=Cattle_Y_G01047;Dbxref=GeneID:112445381;Name=TRNAV-CAC;description=transfer RNA valine (anticodon CAC);gbkey=Gene;gene=TRNAV-CAC;gene_biotype=tRNA;gene_id=Cattle_Y_G01047;source_id=gene-TRNAV-CAC-25
haplotype2-0000357	CAT	tRNA	54429834	54429906	.	+	.	ID=Cattle_Y_T01787;Parent=Cattle_Y_G01047;Dbxref=GeneID:112445381;Note=transfer RNA valine (anticodon CAC);anticodon=(pos:complement(4096987..4096989));gbkey=tRNA;gene=TRNAV-CAC;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Gly;gene_id=Cattle_Y_G01047;transcript_id=Cattle_Y_T01787;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=rna-TRNAV-CAC-25
haplotype2-0000357	CAT	exon	54429834	54429906	.	+	.	ID=Cattle_Y_E04033;Parent=Cattle_Y_T01787;Dbxref=GeneID:112445381;Note=transfer RNA valine (anticodon CAC);anticodon=(pos:complement(4096987..4096989));gbkey=tRNA;gene=TRNAV-CAC;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Gly;gene_id=Cattle_Y_G01047;transcript_id=Cattle_Y_T01787;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=exon-TRNAV-CAC-25-1
haplotype2-0000357	CAT	gene	54716830	55109243	.	+	.	ID=Cattle_Y_G01048;Dbxref=BGD:BT15226,GeneID:100300059;Name=LOC100300059;description=neuroligin 4 X-linked;gbkey=Gene;gene=LOC100300059;gene_biotype=protein_coding;gene_id=Cattle_Y_G01048;source_id=gene-LOC100300059-2
haplotype2-0000357	CAT	mRNA	54716832	55109243	.	+	.	ID=Cattle_Y_T01788;Parent=Cattle_Y_G01048;Dbxref=GeneID:100300059,GenBank:XM_015461827.3,BGD:BT15226;Name=XM_015461827.3;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100300059;model_evidence=Supporting evidence includes similarity to: 7 ESTs%2C 14 Proteins%2C 19 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 15 samples with support for all annotated introns;product=neuroligin 4 X-linked%2C transcript variant X1;transcript_id=Cattle_Y_T01788;gene_id=Cattle_Y_G01048;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_015461827.3
haplotype2-0000357	CAT	exon	54716832	54717551	.	+	.	ID=Cattle_Y_E04034;Parent=Cattle_Y_T01788;Dbxref=GeneID:100300059,GenBank:XM_015461827.3,BGD:BT15226;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100300059;product=neuroligin 4 X-linked, transcript variant X1;transcript_id=Cattle_Y_T01788;gene_id=Cattle_Y_G01048;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_015461827.3-1
haplotype2-0000357	CAT	exon	54757849	54758017	.	+	.	ID=Cattle_Y_E04035;Parent=Cattle_Y_T01788;Dbxref=GeneID:100300059,GenBank:XM_015461827.3,BGD:BT15226;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100300059;product=neuroligin 4 X-linked, transcript variant X1;transcript_id=Cattle_Y_T01788;gene_id=Cattle_Y_G01048;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_015461827.3-2
haplotype2-0000357	CAT	exon	54761159	54761246	.	+	.	ID=Cattle_Y_E04036;Parent=Cattle_Y_T01788;Dbxref=GeneID:100300059,GenBank:XM_015461827.3,BGD:BT15226;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100300059;product=neuroligin 4 X-linked, transcript variant X1;transcript_id=Cattle_Y_T01788;gene_id=Cattle_Y_G01048;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_015461827.3-3
haplotype2-0000357	CAT	exon	54806198	54807023	.	+	.	ID=Cattle_Y_E04037;Parent=Cattle_Y_T01788;Dbxref=GeneID:100300059,GenBank:XM_015461827.3,BGD:BT15226;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100300059;product=neuroligin 4 X-linked, transcript variant X1;transcript_id=Cattle_Y_T01788;gene_id=Cattle_Y_G01048;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_015461827.3-4
haplotype2-0000357	CAT	exon	54956039	54956191	.	+	.	ID=Cattle_Y_E04038;Parent=Cattle_Y_T01788;Dbxref=GeneID:100300059,GenBank:XM_015461827.3,BGD:BT15226;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100300059;product=neuroligin 4 X-linked, transcript variant X1;transcript_id=Cattle_Y_T01788;gene_id=Cattle_Y_G01048;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_015461827.3-5
haplotype2-0000357	CAT	exon	55083287	55083472	.	+	.	ID=Cattle_Y_E04039;Parent=Cattle_Y_T01788;Dbxref=GeneID:100300059,GenBank:XM_015461827.3,BGD:BT15226;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100300059;product=neuroligin 4 X-linked, transcript variant X1;transcript_id=Cattle_Y_T01788;gene_id=Cattle_Y_G01048;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_015461827.3-6
haplotype2-0000357	CAT	exon	55091686	55092475	.	+	.	ID=Cattle_Y_E04040;Parent=Cattle_Y_T01788;Dbxref=GeneID:100300059,GenBank:XM_015461827.3,BGD:BT15226;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100300059;product=neuroligin 4 X-linked, transcript variant X1;transcript_id=Cattle_Y_T01788;gene_id=Cattle_Y_G01048;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_015461827.3-7
haplotype2-0000357	CAT	exon	55105468	55109243	.	+	.	ID=Cattle_Y_E04041;Parent=Cattle_Y_T01788;Dbxref=GeneID:100300059,GenBank:XM_015461827.3,BGD:BT15226;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100300059;product=neuroligin 4 X-linked, transcript variant X1;transcript_id=Cattle_Y_T01788;gene_id=Cattle_Y_G01048;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_015461827.3-8
haplotype2-0000357	CAT	CDS	54806552	54807023	.	+	0	ID=Cattle_Y_C03548;Parent=Cattle_Y_T01788;Dbxref=GeneID:100300059,GenBank:XP_015317313.1,BGD:BT15226;Name=XP_015317313.1;gbkey=CDS;gene=LOC100300059;product=neuroligin-4, X-linked isoform X1;protein_id=XP_015317313.1;gene_id=Cattle_Y_G01048;transcript_id=Cattle_Y_T01788;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	54956039	54956191	.	+	2	ID=Cattle_Y_C03549;Parent=Cattle_Y_T01788;Dbxref=GeneID:100300059,GenBank:XP_015317313.1,BGD:BT15226;Name=XP_015317313.1;gbkey=CDS;gene=LOC100300059;product=neuroligin-4, X-linked isoform X1;protein_id=XP_015317313.1;gene_id=Cattle_Y_G01048;transcript_id=Cattle_Y_T01788;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55083287	55083472	.	+	2	ID=Cattle_Y_C03550;Parent=Cattle_Y_T01788;Dbxref=GeneID:100300059,GenBank:XP_015317313.1,BGD:BT15226;Name=XP_015317313.1;gbkey=CDS;gene=LOC100300059;product=neuroligin-4, X-linked isoform X1;protein_id=XP_015317313.1;gene_id=Cattle_Y_G01048;transcript_id=Cattle_Y_T01788;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55091686	55092475	.	+	2	ID=Cattle_Y_C03551;Parent=Cattle_Y_T01788;Dbxref=GeneID:100300059,GenBank:XP_015317313.1,BGD:BT15226;Name=XP_015317313.1;gbkey=CDS;gene=LOC100300059;product=neuroligin-4, X-linked isoform X1;protein_id=XP_015317313.1;gene_id=Cattle_Y_G01048;transcript_id=Cattle_Y_T01788;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55105468	55106314	.	+	1	ID=Cattle_Y_C03552;Parent=Cattle_Y_T01788;Dbxref=GeneID:100300059,GenBank:XP_015317313.1,BGD:BT15226;Name=XP_015317313.1;gbkey=CDS;gene=LOC100300059;product=neuroligin-4, X-linked isoform X1;protein_id=XP_015317313.1;gene_id=Cattle_Y_G01048;transcript_id=Cattle_Y_T01788;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	54716830	55109243	.	+	.	ID=Cattle_Y_T01789;Parent=Cattle_Y_G01048;Dbxref=GeneID:100300059,GenBank:XM_059884058.1,BGD:BT15226;Name=XM_059884058.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100300059;model_evidence=Supporting evidence includes similarity to: 6 ESTs%2C 11 Proteins%2C 19 long SRA reads%2C and 99%25 coverage of the annotated genomic feature by RNAseq alignments;product=neuroligin 4 X-linked%2C transcript variant X2;transcript_id=Cattle_Y_T01789;gene_id=Cattle_Y_G01048;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884058.1
haplotype2-0000357	CAT	exon	54716830	54717551	.	+	.	ID=Cattle_Y_E04042;Parent=Cattle_Y_T01789;Dbxref=GeneID:100300059,GenBank:XM_059884058.1,BGD:BT15226;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100300059;product=neuroligin 4 X-linked, transcript variant X2;transcript_id=Cattle_Y_T01789;gene_id=Cattle_Y_G01048;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884058.1-1
haplotype2-0000357	CAT	exon	54757849	54758017	.	+	.	ID=Cattle_Y_E04043;Parent=Cattle_Y_T01789;Dbxref=GeneID:100300059,GenBank:XM_059884058.1,BGD:BT15226;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100300059;product=neuroligin 4 X-linked, transcript variant X2;transcript_id=Cattle_Y_T01789;gene_id=Cattle_Y_G01048;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884058.1-2
haplotype2-0000357	CAT	exon	54761159	54761246	.	+	.	ID=Cattle_Y_E04044;Parent=Cattle_Y_T01789;Dbxref=GeneID:100300059,GenBank:XM_059884058.1,BGD:BT15226;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100300059;product=neuroligin 4 X-linked, transcript variant X2;transcript_id=Cattle_Y_T01789;gene_id=Cattle_Y_G01048;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884058.1-3
haplotype2-0000357	CAT	exon	54806198	54807023	.	+	.	ID=Cattle_Y_E04045;Parent=Cattle_Y_T01789;Dbxref=GeneID:100300059,GenBank:XM_059884058.1,BGD:BT15226;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100300059;product=neuroligin 4 X-linked, transcript variant X2;transcript_id=Cattle_Y_T01789;gene_id=Cattle_Y_G01048;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884058.1-4
haplotype2-0000357	CAT	exon	54951848	54951907	.	+	.	ID=Cattle_Y_E04046;Parent=Cattle_Y_T01789;Dbxref=GeneID:100300059,GenBank:XM_059884058.1,BGD:BT15226;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100300059;product=neuroligin 4 X-linked, transcript variant X2;transcript_id=Cattle_Y_T01789;gene_id=Cattle_Y_G01048;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884058.1-5
haplotype2-0000357	CAT	exon	54956039	54956191	.	+	.	ID=Cattle_Y_E04047;Parent=Cattle_Y_T01789;Dbxref=GeneID:100300059,GenBank:XM_059884058.1,BGD:BT15226;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100300059;product=neuroligin 4 X-linked, transcript variant X2;transcript_id=Cattle_Y_T01789;gene_id=Cattle_Y_G01048;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884058.1-6
haplotype2-0000357	CAT	exon	55083287	55083472	.	+	.	ID=Cattle_Y_E04048;Parent=Cattle_Y_T01789;Dbxref=GeneID:100300059,GenBank:XM_059884058.1,BGD:BT15226;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100300059;product=neuroligin 4 X-linked, transcript variant X2;transcript_id=Cattle_Y_T01789;gene_id=Cattle_Y_G01048;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884058.1-7
haplotype2-0000357	CAT	exon	55091686	55092475	.	+	.	ID=Cattle_Y_E04049;Parent=Cattle_Y_T01789;Dbxref=GeneID:100300059,GenBank:XM_059884058.1,BGD:BT15226;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100300059;product=neuroligin 4 X-linked, transcript variant X2;transcript_id=Cattle_Y_T01789;gene_id=Cattle_Y_G01048;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884058.1-8
haplotype2-0000357	CAT	exon	55105468	55109243	.	+	.	ID=Cattle_Y_E04050;Parent=Cattle_Y_T01789;Dbxref=GeneID:100300059,GenBank:XM_059884058.1,BGD:BT15226;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100300059;product=neuroligin 4 X-linked, transcript variant X2;transcript_id=Cattle_Y_T01789;gene_id=Cattle_Y_G01048;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884058.1-9
haplotype2-0000357	CAT	CDS	54806552	54807023	.	+	0	ID=Cattle_Y_C03553;Parent=Cattle_Y_T01789;Dbxref=GeneID:100300059,GenBank:XP_059740041.1,BGD:BT15226;Name=XP_059740041.1;gbkey=CDS;gene=LOC100300059;product=neuroligin-4, X-linked isoform X2;protein_id=XP_059740041.1;gene_id=Cattle_Y_G01048;transcript_id=Cattle_Y_T01789;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	54951848	54951907	.	+	2	ID=Cattle_Y_C03554;Parent=Cattle_Y_T01789;Dbxref=GeneID:100300059,GenBank:XP_059740041.1,BGD:BT15226;Name=XP_059740041.1;gbkey=CDS;gene=LOC100300059;product=neuroligin-4, X-linked isoform X2;protein_id=XP_059740041.1;gene_id=Cattle_Y_G01048;transcript_id=Cattle_Y_T01789;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	54956039	54956191	.	+	2	ID=Cattle_Y_C03555;Parent=Cattle_Y_T01789;Dbxref=GeneID:100300059,GenBank:XP_059740041.1,BGD:BT15226;Name=XP_059740041.1;gbkey=CDS;gene=LOC100300059;product=neuroligin-4, X-linked isoform X2;protein_id=XP_059740041.1;gene_id=Cattle_Y_G01048;transcript_id=Cattle_Y_T01789;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55083287	55083472	.	+	2	ID=Cattle_Y_C03556;Parent=Cattle_Y_T01789;Dbxref=GeneID:100300059,GenBank:XP_059740041.1,BGD:BT15226;Name=XP_059740041.1;gbkey=CDS;gene=LOC100300059;product=neuroligin-4, X-linked isoform X2;protein_id=XP_059740041.1;gene_id=Cattle_Y_G01048;transcript_id=Cattle_Y_T01789;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55091686	55092475	.	+	2	ID=Cattle_Y_C03557;Parent=Cattle_Y_T01789;Dbxref=GeneID:100300059,GenBank:XP_059740041.1,BGD:BT15226;Name=XP_059740041.1;gbkey=CDS;gene=LOC100300059;product=neuroligin-4, X-linked isoform X2;protein_id=XP_059740041.1;gene_id=Cattle_Y_G01048;transcript_id=Cattle_Y_T01789;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55105468	55106314	.	+	1	ID=Cattle_Y_C03558;Parent=Cattle_Y_T01789;Dbxref=GeneID:100300059,GenBank:XP_059740041.1,BGD:BT15226;Name=XP_059740041.1;gbkey=CDS;gene=LOC100300059;product=neuroligin-4, X-linked isoform X2;protein_id=XP_059740041.1;gene_id=Cattle_Y_G01048;transcript_id=Cattle_Y_T01789;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	55072529	55072630	.	-	.	ID=Cattle_Y_G01049;Dbxref=GeneID:112445214;Name=LOC112445214;description=U6 spliceosomal RNA;gbkey=Gene;gene=LOC112445214;gene_biotype=snRNA;gene_id=Cattle_Y_G01049;source_id=gene-LOC112445214-2
haplotype2-0000357	CAT	snRNA	55072529	55072630	.	-	.	ID=Cattle_Y_T01790;Parent=Cattle_Y_G01049;Dbxref=GeneID:112445214,RFAM:RF00026,GenBank:XR_009493669.1;Name=XR_009493669.1;gbkey=ncRNA;gene=LOC112445214;inference=COORDINATES: profile:INFERNAL:1.1.4;product=U6 spliceosomal RNA;transcript_id=Cattle_Y_T01790;gene_id=Cattle_Y_G01049;gene_biotype=snRNA;transcript_biotype=snRNA;source_id=rna-XR_009493669.1
haplotype2-0000357	CAT	exon	55072529	55072630	.	-	.	ID=Cattle_Y_E04051;Parent=Cattle_Y_T01790;Dbxref=GeneID:112445214,RFAM:RF00026,GenBank:XR_009493669.1;gbkey=ncRNA;gene=LOC112445214;inference=COORDINATES: profile:INFERNAL:1.1.4;product=U6 spliceosomal RNA;transcript_id=Cattle_Y_T01790;gene_id=Cattle_Y_G01049;gene_biotype=snRNA;transcript_biotype=snRNA;source_id=exon-XR_009493669.1-1
haplotype2-0000357	CAT	gene	55222576	55222997	.	+	.	ID=Cattle_Y_G01050;Dbxref=GeneID:783541;Name=LOC783541;description=large ribosomal subunit protein eL31-like;gbkey=Gene;gene=LOC783541;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G01050;source_id=gene-LOC783541-2
haplotype2-0000357	CAT	exon	55222576	55222997	.	+	.	ID=Cattle_Y_T01791;Parent=Cattle_Y_G01050;Dbxref=GeneID:783541;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=exon;gene=LOC783541;model_evidence=Supporting evidence includes similarity to: 1 EST, 14 Proteins, and 97%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G01050;transcript_id=Cattle_Y_T01791;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC783541-2
haplotype2-0000357	CAT	gene	55521937	55673607	.	+	.	ID=Cattle_Y_G01051;Dbxref=GeneID:132344372;Name=LOC132344372;description=uncharacterized LOC132344372;gbkey=Gene;gene=LOC132344372;gene_biotype=lncRNA;gene_id=Cattle_Y_G01051;source_id=gene-LOC132344372-2
haplotype2-0000357	CAT	lnc_RNA	55521937	55673607	.	+	.	ID=Cattle_Y_T01792;Parent=Cattle_Y_G01051;Dbxref=GeneID:132344372,GenBank:XR_009493649.1;Name=XR_009493649.1;gbkey=ncRNA;gene=LOC132344372;model_evidence=Supporting evidence includes similarity to: 2 ESTs%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 18 samples with support for all annotated introns;product=uncharacterized lncRNA%2C transcript variant X1;transcript_id=Cattle_Y_T01792;gene_id=Cattle_Y_G01051;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=rna-XR_009493649.1
haplotype2-0000357	CAT	exon	55521937	55522293	.	+	.	ID=Cattle_Y_E04052;Parent=Cattle_Y_T01792;Dbxref=GeneID:132344372,GenBank:XR_009493649.1;gbkey=ncRNA;gene=LOC132344372;product=uncharacterized lncRNA, transcript variant X1;transcript_id=Cattle_Y_T01792;gene_id=Cattle_Y_G01051;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493649.1-1
haplotype2-0000357	CAT	exon	55670873	55671057	.	+	.	ID=Cattle_Y_E04053;Parent=Cattle_Y_T01792;Dbxref=GeneID:132344372,GenBank:XR_009493649.1;gbkey=ncRNA;gene=LOC132344372;product=uncharacterized lncRNA, transcript variant X1;transcript_id=Cattle_Y_T01792;gene_id=Cattle_Y_G01051;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493649.1-2
haplotype2-0000357	CAT	exon	55671217	55673607	.	+	.	ID=Cattle_Y_E04054;Parent=Cattle_Y_T01792;Dbxref=GeneID:132344372,GenBank:XR_009493649.1;gbkey=ncRNA;gene=LOC132344372;product=uncharacterized lncRNA, transcript variant X1;transcript_id=Cattle_Y_T01792;gene_id=Cattle_Y_G01051;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493649.1-3
haplotype2-0000357	CAT	gene	55588411	55595283	.	-	.	ID=Cattle_Y_G01052;Dbxref=GeneID:517854;Name=MGC151921;description=odorant-binding protein-like;gbkey=Gene;gene=MGC151921;gene_biotype=protein_coding;gene_id=Cattle_Y_G01052;source_id=gene-MGC151921-2
haplotype2-0000357	CAT	mRNA	55588411	55595283	.	-	.	ID=Cattle_Y_T01793;Parent=Cattle_Y_G01052;Dbxref=GeneID:517854,GenBank:NM_001075759.2;Name=NM_001075759.2;gbkey=mRNA;gene=MGC151921;product=odorant-binding protein-like;transcript_id=Cattle_Y_T01793;gene_id=Cattle_Y_G01052;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001075759.2-2
haplotype2-0000357	CAT	exon	55588411	55588609	.	-	.	ID=Cattle_Y_E04055;Parent=Cattle_Y_T01793;Dbxref=GeneID:517854,GenBank:NM_001075759.2;gbkey=mRNA;gene=MGC151921;product=odorant-binding protein-like;transcript_id=Cattle_Y_T01793;gene_id=Cattle_Y_G01052;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001075759.2-2-7
haplotype2-0000357	CAT	exon	55590012	55590048	.	-	.	ID=Cattle_Y_E04056;Parent=Cattle_Y_T01793;Dbxref=GeneID:517854,GenBank:NM_001075759.2;gbkey=mRNA;gene=MGC151921;product=odorant-binding protein-like;transcript_id=Cattle_Y_T01793;gene_id=Cattle_Y_G01052;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001075759.2-2-6
haplotype2-0000357	CAT	exon	55590218	55590319	.	-	.	ID=Cattle_Y_E04057;Parent=Cattle_Y_T01793;Dbxref=GeneID:517854,GenBank:NM_001075759.2;gbkey=mRNA;gene=MGC151921;product=odorant-binding protein-like;transcript_id=Cattle_Y_T01793;gene_id=Cattle_Y_G01052;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001075759.2-2-7
haplotype2-0000357	CAT	exon	55592485	55592592	.	-	.	ID=Cattle_Y_E04058;Parent=Cattle_Y_T01793;Dbxref=GeneID:517854,GenBank:NM_001075759.2;gbkey=mRNA;gene=MGC151921;product=odorant-binding protein-like;transcript_id=Cattle_Y_T01793;gene_id=Cattle_Y_G01052;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001075759.2-2-7
haplotype2-0000357	CAT	exon	55593922	55593992	.	-	.	ID=Cattle_Y_E04059;Parent=Cattle_Y_T01793;Dbxref=GeneID:517854,GenBank:NM_001075759.2;gbkey=mRNA;gene=MGC151921;product=odorant-binding protein-like;transcript_id=Cattle_Y_T01793;gene_id=Cattle_Y_G01052;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001075759.2-2-7
haplotype2-0000357	CAT	exon	55594186	55594325	.	-	.	ID=Cattle_Y_E04060;Parent=Cattle_Y_T01793;Dbxref=GeneID:517854,GenBank:NM_001075759.2;gbkey=mRNA;gene=MGC151921;product=odorant-binding protein-like;transcript_id=Cattle_Y_T01793;gene_id=Cattle_Y_G01052;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001075759.2-2-7
haplotype2-0000357	CAT	exon	55595150	55595283	.	-	.	ID=Cattle_Y_E04061;Parent=Cattle_Y_T01793;Dbxref=GeneID:517854,GenBank:NM_001075759.2;gbkey=mRNA;gene=MGC151921;product=odorant-binding protein-like;transcript_id=Cattle_Y_T01793;gene_id=Cattle_Y_G01052;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001075759.2-2-1
haplotype2-0000357	CAT	CDS	55590032	55590048	.	-	2	ID=Cattle_Y_C03559;Parent=Cattle_Y_T01793;gene_id=Cattle_Y_G01052;transcript_id=Cattle_Y_T01793;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55590218	55590319	.	-	2	ID=Cattle_Y_C03560;Parent=Cattle_Y_T01793;gene_id=Cattle_Y_G01052;transcript_id=Cattle_Y_T01793;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55592485	55592592	.	-	2	ID=Cattle_Y_C03561;Parent=Cattle_Y_T01793;gene_id=Cattle_Y_G01052;transcript_id=Cattle_Y_T01793;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55593922	55593992	.	-	1	ID=Cattle_Y_C03562;Parent=Cattle_Y_T01793;gene_id=Cattle_Y_G01052;transcript_id=Cattle_Y_T01793;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55594186	55594325	.	-	0	ID=Cattle_Y_C03563;Parent=Cattle_Y_T01793;gene_id=Cattle_Y_G01052;transcript_id=Cattle_Y_T01793;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55595150	55595230	.	-	0	ID=Cattle_Y_C03564;Parent=Cattle_Y_T01793;gene_id=Cattle_Y_G01052;transcript_id=Cattle_Y_T01793;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	55599966	55605786	.	-	.	ID=Cattle_Y_G01053;Dbxref=GeneID:286791;Name=BDA20;description=major allergen BDA20;gbkey=Gene;gene=BDA20;gene_biotype=protein_coding;gene_id=Cattle_Y_G01053;source_id=gene-BDA20-2
haplotype2-0000357	CAT	mRNA	55599966	55605516	.	-	.	ID=Cattle_Y_T01794;Parent=Cattle_Y_G01053;Dbxref=GeneID:286791,GenBank:NM_174761.2;Name=NM_174761.2;gbkey=mRNA;gene=BDA20;product=major allergen BDA20;transcript_id=Cattle_Y_T01794;gene_id=Cattle_Y_G01053;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_174761.2-2
haplotype2-0000357	CAT	exon	55599966	55600180	.	-	.	ID=Cattle_Y_E04062;Parent=Cattle_Y_T01794;Dbxref=GeneID:286791,GenBank:NM_174761.2;gbkey=mRNA;gene=BDA20;product=major allergen BDA20;transcript_id=Cattle_Y_T01794;gene_id=Cattle_Y_G01053;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_174761.2-2-7
haplotype2-0000357	CAT	exon	55601519	55601555	.	-	.	ID=Cattle_Y_E04063;Parent=Cattle_Y_T01794;Dbxref=GeneID:286791,GenBank:NM_174761.2;gbkey=mRNA;gene=BDA20;product=major allergen BDA20;transcript_id=Cattle_Y_T01794;gene_id=Cattle_Y_G01053;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_174761.2-2-6
haplotype2-0000357	CAT	exon	55601728	55601829	.	-	.	ID=Cattle_Y_E04064;Parent=Cattle_Y_T01794;Dbxref=GeneID:286791,GenBank:NM_174761.2;gbkey=mRNA;gene=BDA20;product=major allergen BDA20;transcript_id=Cattle_Y_T01794;gene_id=Cattle_Y_G01053;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_174761.2-2-5
haplotype2-0000357	CAT	exon	55602813	55602920	.	-	.	ID=Cattle_Y_E04065;Parent=Cattle_Y_T01794;Dbxref=GeneID:286791,GenBank:NM_174761.2;gbkey=mRNA;gene=BDA20;product=major allergen BDA20;transcript_id=Cattle_Y_T01794;gene_id=Cattle_Y_G01053;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_174761.2-2-4
haplotype2-0000357	CAT	exon	55604503	55604573	.	-	.	ID=Cattle_Y_E04066;Parent=Cattle_Y_T01794;Dbxref=GeneID:286791,GenBank:NM_174761.2;gbkey=mRNA;gene=BDA20;product=major allergen BDA20;transcript_id=Cattle_Y_T01794;gene_id=Cattle_Y_G01053;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_174761.2-2-3
haplotype2-0000357	CAT	exon	55604762	55604901	.	-	.	ID=Cattle_Y_E04067;Parent=Cattle_Y_T01794;Dbxref=GeneID:286791,GenBank:NM_174761.2;gbkey=mRNA;gene=BDA20;product=major allergen BDA20;transcript_id=Cattle_Y_T01794;gene_id=Cattle_Y_G01053;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_174761.2-2-2
haplotype2-0000357	CAT	exon	55605418	55605516	.	-	.	ID=Cattle_Y_E04068;Parent=Cattle_Y_T01794;Dbxref=GeneID:286791,GenBank:NM_174761.2;gbkey=mRNA;gene=BDA20;product=major allergen BDA20;transcript_id=Cattle_Y_T01794;gene_id=Cattle_Y_G01053;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_174761.2-2-1
haplotype2-0000357	CAT	CDS	55601539	55601555	.	-	2	ID=Cattle_Y_C03565;Parent=Cattle_Y_T01794;Dbxref=GeneID:286791,GenBank:NP_777186.1;Name=NP_777186.1;gbkey=CDS;gene=BDA20;product=allergen Bos d 2 precursor;protein_id=NP_777186.1;gene_id=Cattle_Y_G01053;transcript_id=Cattle_Y_T01794;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55601728	55601829	.	-	2	ID=Cattle_Y_C03566;Parent=Cattle_Y_T01794;Dbxref=GeneID:286791,GenBank:NP_777186.1;Name=NP_777186.1;gbkey=CDS;gene=BDA20;product=allergen Bos d 2 precursor;protein_id=NP_777186.1;gene_id=Cattle_Y_G01053;transcript_id=Cattle_Y_T01794;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55602813	55602920	.	-	2	ID=Cattle_Y_C03567;Parent=Cattle_Y_T01794;Dbxref=GeneID:286791,GenBank:NP_777186.1;Name=NP_777186.1;gbkey=CDS;gene=BDA20;product=allergen Bos d 2 precursor;protein_id=NP_777186.1;gene_id=Cattle_Y_G01053;transcript_id=Cattle_Y_T01794;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55604503	55604573	.	-	1	ID=Cattle_Y_C03568;Parent=Cattle_Y_T01794;Dbxref=GeneID:286791,GenBank:NP_777186.1;Name=NP_777186.1;gbkey=CDS;gene=BDA20;product=allergen Bos d 2 precursor;protein_id=NP_777186.1;gene_id=Cattle_Y_G01053;transcript_id=Cattle_Y_T01794;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55604762	55604901	.	-	0	ID=Cattle_Y_C03569;Parent=Cattle_Y_T01794;Dbxref=GeneID:286791,GenBank:NP_777186.1;Name=NP_777186.1;gbkey=CDS;gene=BDA20;product=allergen Bos d 2 precursor;protein_id=NP_777186.1;gene_id=Cattle_Y_G01053;transcript_id=Cattle_Y_T01794;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55605418	55605498	.	-	0	ID=Cattle_Y_C03570;Parent=Cattle_Y_T01794;Dbxref=GeneID:286791,GenBank:NP_777186.1;Name=NP_777186.1;gbkey=CDS;gene=BDA20;product=allergen Bos d 2 precursor;protein_id=NP_777186.1;gene_id=Cattle_Y_G01053;transcript_id=Cattle_Y_T01794;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	55601519	55605786	.	-	.	ID=Cattle_Y_T01795;Parent=Cattle_Y_G01053;Dbxref=GeneID:286791,GenBank:XM_059883970.1;Name=XM_059883970.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=BDA20;model_evidence=Supporting evidence includes similarity to: 2 ESTs%2C 2 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=major allergen BDA20%2C transcript variant X1;transcript_id=Cattle_Y_T01795;gene_id=Cattle_Y_G01053;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883970.1
haplotype2-0000357	CAT	exon	55601519	55601829	.	-	.	ID=Cattle_Y_E04069;Parent=Cattle_Y_T01795;Dbxref=GeneID:286791,GenBank:XM_059883970.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=BDA20;product=major allergen BDA20, transcript variant X1;transcript_id=Cattle_Y_T01795;gene_id=Cattle_Y_G01053;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883970.1-5
haplotype2-0000357	CAT	exon	55602813	55602920	.	-	.	ID=Cattle_Y_E04070;Parent=Cattle_Y_T01795;Dbxref=GeneID:286791,GenBank:XM_059883970.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=BDA20;product=major allergen BDA20, transcript variant X1;transcript_id=Cattle_Y_T01795;gene_id=Cattle_Y_G01053;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883970.1-4
haplotype2-0000357	CAT	exon	55604503	55604573	.	-	.	ID=Cattle_Y_E04071;Parent=Cattle_Y_T01795;Dbxref=GeneID:286791,GenBank:XM_059883970.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=BDA20;product=major allergen BDA20, transcript variant X1;transcript_id=Cattle_Y_T01795;gene_id=Cattle_Y_G01053;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883970.1-3
haplotype2-0000357	CAT	exon	55604762	55604901	.	-	.	ID=Cattle_Y_E04072;Parent=Cattle_Y_T01795;Dbxref=GeneID:286791,GenBank:XM_059883970.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=BDA20;product=major allergen BDA20, transcript variant X1;transcript_id=Cattle_Y_T01795;gene_id=Cattle_Y_G01053;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883970.1-2
haplotype2-0000357	CAT	exon	55605418	55605786	.	-	.	ID=Cattle_Y_E04073;Parent=Cattle_Y_T01795;Dbxref=GeneID:286791,GenBank:XM_059883970.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=BDA20;product=major allergen BDA20, transcript variant X1;transcript_id=Cattle_Y_T01795;gene_id=Cattle_Y_G01053;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883970.1-1
haplotype2-0000357	CAT	CDS	55601693	55601829	.	-	2	ID=Cattle_Y_C03571;Parent=Cattle_Y_T01795;Dbxref=GeneID:286791,GenBank:XP_059739953.1;Name=XP_059739953.1;gbkey=CDS;gene=BDA20;product=allergen Bos d 2 isoform X1;protein_id=XP_059739953.1;gene_id=Cattle_Y_G01053;transcript_id=Cattle_Y_T01795;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55602813	55602920	.	-	2	ID=Cattle_Y_C03572;Parent=Cattle_Y_T01795;Dbxref=GeneID:286791,GenBank:XP_059739953.1;Name=XP_059739953.1;gbkey=CDS;gene=BDA20;product=allergen Bos d 2 isoform X1;protein_id=XP_059739953.1;gene_id=Cattle_Y_G01053;transcript_id=Cattle_Y_T01795;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55604503	55604573	.	-	1	ID=Cattle_Y_C03573;Parent=Cattle_Y_T01795;Dbxref=GeneID:286791,GenBank:XP_059739953.1;Name=XP_059739953.1;gbkey=CDS;gene=BDA20;product=allergen Bos d 2 isoform X1;protein_id=XP_059739953.1;gene_id=Cattle_Y_G01053;transcript_id=Cattle_Y_T01795;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55604762	55604901	.	-	0	ID=Cattle_Y_C03574;Parent=Cattle_Y_T01795;Dbxref=GeneID:286791,GenBank:XP_059739953.1;Name=XP_059739953.1;gbkey=CDS;gene=BDA20;product=allergen Bos d 2 isoform X1;protein_id=XP_059739953.1;gene_id=Cattle_Y_G01053;transcript_id=Cattle_Y_T01795;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55605418	55605498	.	-	0	ID=Cattle_Y_C03575;Parent=Cattle_Y_T01795;Dbxref=GeneID:286791,GenBank:XP_059739953.1;Name=XP_059739953.1;gbkey=CDS;gene=BDA20;product=allergen Bos d 2 isoform X1;protein_id=XP_059739953.1;gene_id=Cattle_Y_G01053;transcript_id=Cattle_Y_T01795;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	55674332	55678206	.	-	.	ID=Cattle_Y_G01054;Dbxref=GeneID:100300091;Name=LOC100300091;description=allergen Bos d 2;gbkey=Gene;gene=LOC100300091;gene_biotype=protein_coding;gene_id=Cattle_Y_G01054;source_id=gene-LOC100300091-2
haplotype2-0000357	CAT	mRNA	55674332	55678206	.	-	.	ID=Cattle_Y_T01796;Parent=Cattle_Y_G01054;Dbxref=GeneID:100300091,GenBank:XM_059884002.1;Name=XM_059884002.1;gbkey=mRNA;gene=LOC100300091;model_evidence=Supporting evidence includes similarity to: 4 ESTs%2C and 91%25 coverage of the annotated genomic feature by RNAseq alignments;product=allergen Bos d 2%2C transcript variant X1;transcript_id=Cattle_Y_T01796;gene_id=Cattle_Y_G01054;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884002.1
haplotype2-0000357	CAT	exon	55674332	55674355	.	-	.	ID=Cattle_Y_E04074;Parent=Cattle_Y_T01796;Dbxref=GeneID:100300091,GenBank:XM_059884002.1;gbkey=mRNA;gene=LOC100300091;product=allergen Bos d 2, transcript variant X1;transcript_id=Cattle_Y_T01796;gene_id=Cattle_Y_G01054;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884002.1-5
haplotype2-0000357	CAT	exon	55675946	55676037	.	-	.	ID=Cattle_Y_E04075;Parent=Cattle_Y_T01796;Dbxref=GeneID:100300091,GenBank:XM_059884002.1;gbkey=mRNA;gene=LOC100300091;product=allergen Bos d 2, transcript variant X1;transcript_id=Cattle_Y_T01796;gene_id=Cattle_Y_G01054;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884002.1-4
haplotype2-0000357	CAT	exon	55677197	55677264	.	-	.	ID=Cattle_Y_E04076;Parent=Cattle_Y_T01796;Dbxref=GeneID:100300091,GenBank:XM_059884002.1;gbkey=mRNA;gene=LOC100300091;product=allergen Bos d 2, transcript variant X1;transcript_id=Cattle_Y_T01796;gene_id=Cattle_Y_G01054;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884002.1-3
haplotype2-0000357	CAT	exon	55677452	55677591	.	-	.	ID=Cattle_Y_E04077;Parent=Cattle_Y_T01796;Dbxref=GeneID:100300091,GenBank:XM_059884002.1;gbkey=mRNA;gene=LOC100300091;product=allergen Bos d 2, transcript variant X1;transcript_id=Cattle_Y_T01796;gene_id=Cattle_Y_G01054;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884002.1-2
haplotype2-0000357	CAT	exon	55678082	55678206	.	-	.	ID=Cattle_Y_E04078;Parent=Cattle_Y_T01796;Dbxref=GeneID:100300091,GenBank:XM_059884002.1;gbkey=mRNA;gene=LOC100300091;product=allergen Bos d 2, transcript variant X1;transcript_id=Cattle_Y_T01796;gene_id=Cattle_Y_G01054;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884002.1-1
haplotype2-0000357	CAT	CDS	55674332	55674355	.	-	0	ID=Cattle_Y_C03576;Parent=Cattle_Y_T01796;Dbxref=GeneID:100300091,GenBank:XP_059739985.1;Name=XP_059739985.1;gbkey=CDS;gene=LOC100300091;product=allergen Bos d 2 isoform X1;protein_id=XP_059739985.1;gene_id=Cattle_Y_G01054;transcript_id=Cattle_Y_T01796;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55675946	55676037	.	-	2	ID=Cattle_Y_C03577;Parent=Cattle_Y_T01796;Dbxref=GeneID:100300091,GenBank:XP_059739985.1;Name=XP_059739985.1;gbkey=CDS;gene=LOC100300091;product=allergen Bos d 2 isoform X1;protein_id=XP_059739985.1;gene_id=Cattle_Y_G01054;transcript_id=Cattle_Y_T01796;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55677197	55677264	.	-	1	ID=Cattle_Y_C03578;Parent=Cattle_Y_T01796;Dbxref=GeneID:100300091,GenBank:XP_059739985.1;Name=XP_059739985.1;gbkey=CDS;gene=LOC100300091;product=allergen Bos d 2 isoform X1;protein_id=XP_059739985.1;gene_id=Cattle_Y_G01054;transcript_id=Cattle_Y_T01796;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55677452	55677591	.	-	0	ID=Cattle_Y_C03579;Parent=Cattle_Y_T01796;Dbxref=GeneID:100300091,GenBank:XP_059739985.1;Name=XP_059739985.1;gbkey=CDS;gene=LOC100300091;product=allergen Bos d 2 isoform X1;protein_id=XP_059739985.1;gene_id=Cattle_Y_G01054;transcript_id=Cattle_Y_T01796;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55678082	55678162	.	-	0	ID=Cattle_Y_C03580;Parent=Cattle_Y_T01796;Dbxref=GeneID:100300091,GenBank:XP_059739985.1;Name=XP_059739985.1;gbkey=CDS;gene=LOC100300091;product=allergen Bos d 2 isoform X1;protein_id=XP_059739985.1;gene_id=Cattle_Y_G01054;transcript_id=Cattle_Y_T01796;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	55717849	55717920	.	+	.	ID=Cattle_Y_G01055;Dbxref=GeneID:112445382;Name=TRNAC-GCA;description=transfer RNA cysteine (anticodon GCA);gbkey=Gene;gene=TRNAC-GCA;gene_biotype=tRNA;gene_id=Cattle_Y_G01055;source_id=gene-TRNAC-GCA-247
haplotype2-0000357	CAT	tRNA	55717849	55717920	.	+	.	ID=Cattle_Y_T01797;Parent=Cattle_Y_G01055;Dbxref=GeneID:112445382;Note=transfer RNA cysteine (anticodon GCA);anticodon=(pos:complement(2807340..2807342));gbkey=tRNA;gene=TRNAC-GCA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Cys;gene_id=Cattle_Y_G01055;transcript_id=Cattle_Y_T01797;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=rna-TRNAC-GCA-247
haplotype2-0000357	CAT	exon	55717849	55717920	.	+	.	ID=Cattle_Y_E04079;Parent=Cattle_Y_T01797;Dbxref=GeneID:112445382;Note=transfer RNA cysteine (anticodon GCA);anticodon=(pos:complement(2807340..2807342));gbkey=tRNA;gene=TRNAC-GCA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Cys;gene_id=Cattle_Y_G01055;transcript_id=Cattle_Y_T01797;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=exon-TRNAC-GCA-247-1
haplotype2-0000357	CAT	gene	55816088	55826046	.	-	.	ID=Cattle_Y_G01056;Dbxref=GeneID:101904044;Name=LOC101904044;description=odorant-binding protein-like;gbkey=Gene;gene=LOC101904044;gene_biotype=protein_coding;gene_id=Cattle_Y_G01056;source_id=gene-LOC101904044-2
haplotype2-0000357	CAT	mRNA	55816088	55826046	.	-	.	ID=Cattle_Y_T01798;Parent=Cattle_Y_G01056;Dbxref=GeneID:101904044,GenBank:XM_059884057.1;Name=XM_059884057.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC101904044;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=odorant-binding protein-like;transcript_id=Cattle_Y_T01798;gene_id=Cattle_Y_G01056;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884057.1
haplotype2-0000357	CAT	exon	55816088	55816295	.	-	.	ID=Cattle_Y_E04080;Parent=Cattle_Y_T01798;Dbxref=GeneID:101904044,GenBank:XM_059884057.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC101904044;product=odorant-binding protein-like;transcript_id=Cattle_Y_T01798;gene_id=Cattle_Y_G01056;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884057.1-7
haplotype2-0000357	CAT	exon	55817908	55817950	.	-	.	ID=Cattle_Y_E04081;Parent=Cattle_Y_T01798;Dbxref=GeneID:101904044,GenBank:XM_059884057.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC101904044;product=odorant-binding protein-like;transcript_id=Cattle_Y_T01798;gene_id=Cattle_Y_G01056;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884057.1-6
haplotype2-0000357	CAT	exon	55818164	55818265	.	-	.	ID=Cattle_Y_E04082;Parent=Cattle_Y_T01798;Dbxref=GeneID:101904044,GenBank:XM_059884057.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC101904044;product=odorant-binding protein-like;transcript_id=Cattle_Y_T01798;gene_id=Cattle_Y_G01056;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884057.1-5
haplotype2-0000357	CAT	exon	55819882	55819992	.	-	.	ID=Cattle_Y_E04083;Parent=Cattle_Y_T01798;Dbxref=GeneID:101904044,GenBank:XM_059884057.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC101904044;product=odorant-binding protein-like;transcript_id=Cattle_Y_T01798;gene_id=Cattle_Y_G01056;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884057.1-4
haplotype2-0000357	CAT	exon	55821675	55821742	.	-	.	ID=Cattle_Y_E04084;Parent=Cattle_Y_T01798;Dbxref=GeneID:101904044,GenBank:XM_059884057.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC101904044;product=odorant-binding protein-like;transcript_id=Cattle_Y_T01798;gene_id=Cattle_Y_G01056;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884057.1-3
haplotype2-0000357	CAT	exon	55825326	55825465	.	-	.	ID=Cattle_Y_E04085;Parent=Cattle_Y_T01798;Dbxref=GeneID:101904044,GenBank:XM_059884057.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC101904044;product=odorant-binding protein-like;transcript_id=Cattle_Y_T01798;gene_id=Cattle_Y_G01056;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884057.1-2
haplotype2-0000357	CAT	exon	55825939	55826046	.	-	.	ID=Cattle_Y_E04086;Parent=Cattle_Y_T01798;Dbxref=GeneID:101904044,GenBank:XM_059884057.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC101904044;product=odorant-binding protein-like;transcript_id=Cattle_Y_T01798;gene_id=Cattle_Y_G01056;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884057.1-1
haplotype2-0000357	CAT	CDS	55817931	55817950	.	-	2	ID=Cattle_Y_C03581;Parent=Cattle_Y_T01798;Dbxref=GeneID:101904044,GenBank:XP_059740040.1;Name=XP_059740040.1;gbkey=CDS;gene=LOC101904044;product=odorant-binding protein-like;protein_id=XP_059740040.1;gene_id=Cattle_Y_G01056;transcript_id=Cattle_Y_T01798;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55818164	55818265	.	-	2	ID=Cattle_Y_C03582;Parent=Cattle_Y_T01798;Dbxref=GeneID:101904044,GenBank:XP_059740040.1;Name=XP_059740040.1;gbkey=CDS;gene=LOC101904044;product=odorant-binding protein-like;protein_id=XP_059740040.1;gene_id=Cattle_Y_G01056;transcript_id=Cattle_Y_T01798;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55819882	55819992	.	-	2	ID=Cattle_Y_C03583;Parent=Cattle_Y_T01798;Dbxref=GeneID:101904044,GenBank:XP_059740040.1;Name=XP_059740040.1;gbkey=CDS;gene=LOC101904044;product=odorant-binding protein-like;protein_id=XP_059740040.1;gene_id=Cattle_Y_G01056;transcript_id=Cattle_Y_T01798;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55821675	55821742	.	-	1	ID=Cattle_Y_C03584;Parent=Cattle_Y_T01798;Dbxref=GeneID:101904044,GenBank:XP_059740040.1;Name=XP_059740040.1;gbkey=CDS;gene=LOC101904044;product=odorant-binding protein-like;protein_id=XP_059740040.1;gene_id=Cattle_Y_G01056;transcript_id=Cattle_Y_T01798;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55825326	55825465	.	-	0	ID=Cattle_Y_C03585;Parent=Cattle_Y_T01798;Dbxref=GeneID:101904044,GenBank:XP_059740040.1;Name=XP_059740040.1;gbkey=CDS;gene=LOC101904044;product=odorant-binding protein-like;protein_id=XP_059740040.1;gene_id=Cattle_Y_G01056;transcript_id=Cattle_Y_T01798;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55825939	55826013	.	-	0	ID=Cattle_Y_C03586;Parent=Cattle_Y_T01798;Dbxref=GeneID:101904044,GenBank:XP_059740040.1;Name=XP_059740040.1;gbkey=CDS;gene=LOC101904044;product=odorant-binding protein-like;protein_id=XP_059740040.1;gene_id=Cattle_Y_G01056;transcript_id=Cattle_Y_T01798;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	55845955	55848871	.	-	.	ID=Cattle_Y_G01057;Dbxref=GeneID:132344569;Name=LOC132344569;description=uncharacterized LOC132344569;gbkey=Gene;gene=LOC132344569;gene_biotype=lncRNA;gene_id=Cattle_Y_G01057;source_id=gene-LOC132344569
haplotype2-0000357	CAT	lnc_RNA	55845955	55848871	.	-	.	ID=Cattle_Y_T01799;Parent=Cattle_Y_G01057;Dbxref=GeneID:132344569,GenBank:XR_009493656.1;Name=XR_009493656.1;gbkey=ncRNA;gene=LOC132344569;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 8 samples with support for all annotated introns;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01799;gene_id=Cattle_Y_G01057;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=rna-XR_009493656.1
haplotype2-0000357	CAT	exon	55845955	55846155	.	-	.	ID=Cattle_Y_E04087;Parent=Cattle_Y_T01799;Dbxref=GeneID:132344569,GenBank:XR_009493656.1;gbkey=ncRNA;gene=LOC132344569;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01799;gene_id=Cattle_Y_G01057;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493656.1-3
haplotype2-0000357	CAT	exon	55847862	55847904	.	-	.	ID=Cattle_Y_E04088;Parent=Cattle_Y_T01799;Dbxref=GeneID:132344569,GenBank:XR_009493656.1;gbkey=ncRNA;gene=LOC132344569;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01799;gene_id=Cattle_Y_G01057;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493656.1-2
haplotype2-0000357	CAT	exon	55848339	55848871	.	-	.	ID=Cattle_Y_E04089;Parent=Cattle_Y_T01799;Dbxref=GeneID:132344569,GenBank:XR_009493656.1;gbkey=ncRNA;gene=LOC132344569;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01799;gene_id=Cattle_Y_G01057;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493656.1-1
haplotype2-0000357	CAT	gene	55876882	55885552	.	-	.	ID=Cattle_Y_G01058;Dbxref=BGD:BT25953,GeneID:785083;Name=OBP;description=odorant-binding protein;gbkey=Gene;gene=OBP;gene_biotype=protein_coding;gene_id=Cattle_Y_G01058;source_id=gene-OBP-2
haplotype2-0000357	CAT	mRNA	55876882	55885552	.	-	.	ID=Cattle_Y_T01800;Parent=Cattle_Y_G01058;Dbxref=GeneID:785083,GenBank:XM_002700469.7,BGD:BT25953;Name=XM_002700469.7;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=OBP;model_evidence=Supporting evidence includes similarity to: 2 ESTs%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 22 samples with support for all annotated introns;product=odorant-binding protein;transcript_id=Cattle_Y_T01800;gene_id=Cattle_Y_G01058;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_002700469.7
haplotype2-0000357	CAT	exon	55876882	55877089	.	-	.	ID=Cattle_Y_E04090;Parent=Cattle_Y_T01800;Dbxref=GeneID:785083,GenBank:XM_002700469.7,BGD:BT25953;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=OBP;product=odorant-binding protein;transcript_id=Cattle_Y_T01800;gene_id=Cattle_Y_G01058;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_002700469.7-7
haplotype2-0000357	CAT	exon	55879512	55879556	.	-	.	ID=Cattle_Y_E04091;Parent=Cattle_Y_T01800;Dbxref=GeneID:785083,GenBank:XM_002700469.7,BGD:BT25953;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=OBP;product=odorant-binding protein;transcript_id=Cattle_Y_T01800;gene_id=Cattle_Y_G01058;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_002700469.7-6
haplotype2-0000357	CAT	exon	55879761	55879859	.	-	.	ID=Cattle_Y_E04092;Parent=Cattle_Y_T01800;Dbxref=GeneID:785083,GenBank:XM_002700469.7,BGD:BT25953;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=OBP;product=odorant-binding protein;transcript_id=Cattle_Y_T01800;gene_id=Cattle_Y_G01058;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_002700469.7-5
haplotype2-0000357	CAT	exon	55880865	55880975	.	-	.	ID=Cattle_Y_E04093;Parent=Cattle_Y_T01800;Dbxref=GeneID:785083,GenBank:XM_002700469.7,BGD:BT25953;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=OBP;product=odorant-binding protein;transcript_id=Cattle_Y_T01800;gene_id=Cattle_Y_G01058;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_002700469.7-4
haplotype2-0000357	CAT	exon	55883868	55883938	.	-	.	ID=Cattle_Y_E04094;Parent=Cattle_Y_T01800;Dbxref=GeneID:785083,GenBank:XM_002700469.7,BGD:BT25953;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=OBP;product=odorant-binding protein;transcript_id=Cattle_Y_T01800;gene_id=Cattle_Y_G01058;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_002700469.7-3
haplotype2-0000357	CAT	exon	55884798	55884937	.	-	.	ID=Cattle_Y_E04095;Parent=Cattle_Y_T01800;Dbxref=GeneID:785083,GenBank:XM_002700469.7,BGD:BT25953;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=OBP;product=odorant-binding protein;transcript_id=Cattle_Y_T01800;gene_id=Cattle_Y_G01058;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_002700469.7-2
haplotype2-0000357	CAT	exon	55885409	55885552	.	-	.	ID=Cattle_Y_E04096;Parent=Cattle_Y_T01800;Dbxref=GeneID:785083,GenBank:XM_002700469.7,BGD:BT25953;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=OBP;product=odorant-binding protein;transcript_id=Cattle_Y_T01800;gene_id=Cattle_Y_G01058;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_002700469.7-1
haplotype2-0000357	CAT	CDS	55879534	55879556	.	-	2	ID=Cattle_Y_C03587;Parent=Cattle_Y_T01800;Dbxref=GeneID:785083,GenBank:XP_002700515.4,BGD:BT25953;Name=XP_002700515.4;gbkey=CDS;gene=OBP;product=odorant-binding protein;protein_id=XP_002700515.4;gene_id=Cattle_Y_G01058;transcript_id=Cattle_Y_T01800;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55879761	55879859	.	-	2	ID=Cattle_Y_C03588;Parent=Cattle_Y_T01800;Dbxref=GeneID:785083,GenBank:XP_002700515.4,BGD:BT25953;Name=XP_002700515.4;gbkey=CDS;gene=OBP;product=odorant-binding protein;protein_id=XP_002700515.4;gene_id=Cattle_Y_G01058;transcript_id=Cattle_Y_T01800;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55880865	55880975	.	-	2	ID=Cattle_Y_C03589;Parent=Cattle_Y_T01800;Dbxref=GeneID:785083,GenBank:XP_002700515.4,BGD:BT25953;Name=XP_002700515.4;gbkey=CDS;gene=OBP;product=odorant-binding protein;protein_id=XP_002700515.4;gene_id=Cattle_Y_G01058;transcript_id=Cattle_Y_T01800;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55883868	55883938	.	-	1	ID=Cattle_Y_C03590;Parent=Cattle_Y_T01800;Dbxref=GeneID:785083,GenBank:XP_002700515.4,BGD:BT25953;Name=XP_002700515.4;gbkey=CDS;gene=OBP;product=odorant-binding protein;protein_id=XP_002700515.4;gene_id=Cattle_Y_G01058;transcript_id=Cattle_Y_T01800;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55884798	55884937	.	-	0	ID=Cattle_Y_C03591;Parent=Cattle_Y_T01800;Dbxref=GeneID:785083,GenBank:XP_002700515.4,BGD:BT25953;Name=XP_002700515.4;gbkey=CDS;gene=OBP;product=odorant-binding protein;protein_id=XP_002700515.4;gene_id=Cattle_Y_G01058;transcript_id=Cattle_Y_T01800;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55885409	55885489	.	-	0	ID=Cattle_Y_C03592;Parent=Cattle_Y_T01800;Dbxref=GeneID:785083,GenBank:XP_002700515.4,BGD:BT25953;Name=XP_002700515.4;gbkey=CDS;gene=OBP;product=odorant-binding protein;protein_id=XP_002700515.4;gene_id=Cattle_Y_G01058;transcript_id=Cattle_Y_T01800;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	55934825	55937745	.	+	.	ID=Cattle_Y_G01059;Dbxref=GeneID:132344569;Name=LOC132344569;description=uncharacterized LOC132344569;gbkey=Gene;gene=LOC132344569;gene_biotype=lncRNA;gene_id=Cattle_Y_G01059;source_id=gene-LOC132344569
haplotype2-0000357	CAT	lnc_RNA	55934825	55937745	.	+	.	ID=Cattle_Y_T01801;Parent=Cattle_Y_G01059;Dbxref=GeneID:132344569,GenBank:XR_009493656.1;Name=XR_009493656.1;gbkey=ncRNA;gene=LOC132344569;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 8 samples with support for all annotated introns;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01801;gene_id=Cattle_Y_G01059;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=rna-XR_009493656.1
haplotype2-0000357	CAT	exon	55934825	55935355	.	+	.	ID=Cattle_Y_E04097;Parent=Cattle_Y_T01801;Dbxref=GeneID:132344569,GenBank:XR_009493656.1;gbkey=ncRNA;gene=LOC132344569;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01801;gene_id=Cattle_Y_G01059;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493656.1-1
haplotype2-0000357	CAT	exon	55935791	55935834	.	+	.	ID=Cattle_Y_E04098;Parent=Cattle_Y_T01801;Dbxref=GeneID:132344569,GenBank:XR_009493656.1;gbkey=ncRNA;gene=LOC132344569;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01801;gene_id=Cattle_Y_G01059;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493656.1-2
haplotype2-0000357	CAT	exon	55937547	55937745	.	+	.	ID=Cattle_Y_E04099;Parent=Cattle_Y_T01801;Dbxref=GeneID:132344569,GenBank:XR_009493656.1;gbkey=ncRNA;gene=LOC132344569;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01801;gene_id=Cattle_Y_G01059;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493656.1-3
haplotype2-0000357	CAT	gene	55976429	55982263	.	-	.	ID=Cattle_Y_G01060;Dbxref=GeneID:104969973;Name=LOC104969973;description=odorant-binding protein-like;gbkey=Gene;gene=LOC104969973;gene_biotype=protein_coding;gene_id=Cattle_Y_G01060;source_id=gene-LOC104969973-2
haplotype2-0000357	CAT	mRNA	55976429	55982263	.	-	.	ID=Cattle_Y_T01802;Parent=Cattle_Y_G01060;Dbxref=GeneID:104969973,GenBank:XM_059884056.1;Name=XM_059884056.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC104969973;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 10 samples with support for all annotated introns;product=odorant-binding protein-like;transcript_id=Cattle_Y_T01802;gene_id=Cattle_Y_G01060;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884056.1
haplotype2-0000357	CAT	exon	55976429	55976615	.	-	.	ID=Cattle_Y_E04100;Parent=Cattle_Y_T01802;Dbxref=GeneID:104969973,GenBank:XM_059884056.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC104969973;product=odorant-binding protein-like;transcript_id=Cattle_Y_T01802;gene_id=Cattle_Y_G01060;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884056.1-7
haplotype2-0000357	CAT	exon	55978081	55978128	.	-	.	ID=Cattle_Y_E04101;Parent=Cattle_Y_T01802;Dbxref=GeneID:104969973,GenBank:XM_059884056.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC104969973;product=odorant-binding protein-like;transcript_id=Cattle_Y_T01802;gene_id=Cattle_Y_G01060;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884056.1-6
haplotype2-0000357	CAT	exon	55978346	55978444	.	-	.	ID=Cattle_Y_E04102;Parent=Cattle_Y_T01802;Dbxref=GeneID:104969973,GenBank:XM_059884056.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC104969973;product=odorant-binding protein-like;transcript_id=Cattle_Y_T01802;gene_id=Cattle_Y_G01060;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884056.1-5
haplotype2-0000357	CAT	exon	55979508	55979618	.	-	.	ID=Cattle_Y_E04103;Parent=Cattle_Y_T01802;Dbxref=GeneID:104969973,GenBank:XM_059884056.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC104969973;product=odorant-binding protein-like;transcript_id=Cattle_Y_T01802;gene_id=Cattle_Y_G01060;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884056.1-4
haplotype2-0000357	CAT	exon	55980636	55980706	.	-	.	ID=Cattle_Y_E04104;Parent=Cattle_Y_T01802;Dbxref=GeneID:104969973,GenBank:XM_059884056.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC104969973;product=odorant-binding protein-like;transcript_id=Cattle_Y_T01802;gene_id=Cattle_Y_G01060;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884056.1-3
haplotype2-0000357	CAT	exon	55981538	55981677	.	-	.	ID=Cattle_Y_E04105;Parent=Cattle_Y_T01802;Dbxref=GeneID:104969973,GenBank:XM_059884056.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC104969973;product=odorant-binding protein-like;transcript_id=Cattle_Y_T01802;gene_id=Cattle_Y_G01060;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884056.1-2
haplotype2-0000357	CAT	exon	55982145	55982263	.	-	.	ID=Cattle_Y_E04106;Parent=Cattle_Y_T01802;Dbxref=GeneID:104969973,GenBank:XM_059884056.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC104969973;product=odorant-binding protein-like;transcript_id=Cattle_Y_T01802;gene_id=Cattle_Y_G01060;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884056.1-1
haplotype2-0000357	CAT	CDS	55978121	55978128	.	-	2	ID=Cattle_Y_C03593;Parent=Cattle_Y_T01802;Dbxref=GeneID:104969973,GenBank:XP_059740039.1;Name=XP_059740039.1;gbkey=CDS;gene=LOC104969973;product=odorant-binding protein-like;protein_id=XP_059740039.1;gene_id=Cattle_Y_G01060;transcript_id=Cattle_Y_T01802;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55978346	55978444	.	-	2	ID=Cattle_Y_C03594;Parent=Cattle_Y_T01802;Dbxref=GeneID:104969973,GenBank:XP_059740039.1;Name=XP_059740039.1;gbkey=CDS;gene=LOC104969973;product=odorant-binding protein-like;protein_id=XP_059740039.1;gene_id=Cattle_Y_G01060;transcript_id=Cattle_Y_T01802;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55979508	55979618	.	-	2	ID=Cattle_Y_C03595;Parent=Cattle_Y_T01802;Dbxref=GeneID:104969973,GenBank:XP_059740039.1;Name=XP_059740039.1;gbkey=CDS;gene=LOC104969973;product=odorant-binding protein-like;protein_id=XP_059740039.1;gene_id=Cattle_Y_G01060;transcript_id=Cattle_Y_T01802;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55980636	55980706	.	-	1	ID=Cattle_Y_C03596;Parent=Cattle_Y_T01802;Dbxref=GeneID:104969973,GenBank:XP_059740039.1;Name=XP_059740039.1;gbkey=CDS;gene=LOC104969973;product=odorant-binding protein-like;protein_id=XP_059740039.1;gene_id=Cattle_Y_G01060;transcript_id=Cattle_Y_T01802;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55981538	55981677	.	-	0	ID=Cattle_Y_C03597;Parent=Cattle_Y_T01802;Dbxref=GeneID:104969973,GenBank:XP_059740039.1;Name=XP_059740039.1;gbkey=CDS;gene=LOC104969973;product=odorant-binding protein-like;protein_id=XP_059740039.1;gene_id=Cattle_Y_G01060;transcript_id=Cattle_Y_T01802;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	55982145	55982225	.	-	0	ID=Cattle_Y_C03598;Parent=Cattle_Y_T01802;Dbxref=GeneID:104969973,GenBank:XP_059740039.1;Name=XP_059740039.1;gbkey=CDS;gene=LOC104969973;product=odorant-binding protein-like;protein_id=XP_059740039.1;gene_id=Cattle_Y_G01060;transcript_id=Cattle_Y_T01802;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	55988990	55996073	.	-	.	ID=Cattle_Y_G01061;Dbxref=GeneID:104969972;Name=LOC104969972;description=uncharacterized LOC104969972;gbkey=Gene;gene=LOC104969972;gene_biotype=lncRNA;gene_id=Cattle_Y_G01061;source_id=gene-LOC104969972-2
haplotype2-0000357	CAT	lnc_RNA	55988990	55996073	.	-	.	ID=Cattle_Y_T01803;Parent=Cattle_Y_G01061;Dbxref=GeneID:104969972,GenBank:XR_009493655.1;Name=XR_009493655.1;gbkey=ncRNA;gene=LOC104969972;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 1 sample with support for all annotated introns;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01803;gene_id=Cattle_Y_G01061;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=rna-XR_009493655.1
haplotype2-0000357	CAT	exon	55988990	55989129	.	-	.	ID=Cattle_Y_E04107;Parent=Cattle_Y_T01803;Dbxref=GeneID:104969972,GenBank:XR_009493655.1;gbkey=ncRNA;gene=LOC104969972;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01803;gene_id=Cattle_Y_G01061;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493655.1-3
haplotype2-0000357	CAT	exon	55990550	55990651	.	-	.	ID=Cattle_Y_E04108;Parent=Cattle_Y_T01803;Dbxref=GeneID:104969972,GenBank:XR_009493655.1;gbkey=ncRNA;gene=LOC104969972;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01803;gene_id=Cattle_Y_G01061;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493655.1-2
haplotype2-0000357	CAT	exon	55995925	55996073	.	-	.	ID=Cattle_Y_E04109;Parent=Cattle_Y_T01803;Dbxref=GeneID:104969972,GenBank:XR_009493655.1;gbkey=ncRNA;gene=LOC104969972;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01803;gene_id=Cattle_Y_G01061;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493655.1-1
haplotype2-0000357	CAT	gene	56011894	56022522	.	-	.	ID=Cattle_Y_G01062;Dbxref=GeneID:100847998;Name=LOC100847998;description=allergen Bos d 2-like;gbkey=Gene;gene=LOC100847998;gene_biotype=protein_coding;gene_id=Cattle_Y_G01062;source_id=gene-LOC100847998-2
haplotype2-0000357	CAT	mRNA	56011894	56022522	.	-	.	ID=Cattle_Y_T01804;Parent=Cattle_Y_G01062;Dbxref=GeneID:100847998,GenBank:XM_059884236.1;Name=XM_059884236.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100847998;model_evidence=Supporting evidence includes similarity to: 3 ESTs%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=allergen Bos d 2-like;transcript_id=Cattle_Y_T01804;gene_id=Cattle_Y_G01062;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884236.1
haplotype2-0000357	CAT	exon	56011894	56012102	.	-	.	ID=Cattle_Y_E04110;Parent=Cattle_Y_T01804;Dbxref=GeneID:100847998,GenBank:XM_059884236.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100847998;product=allergen Bos d 2-like;transcript_id=Cattle_Y_T01804;gene_id=Cattle_Y_G01062;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884236.1-7
haplotype2-0000357	CAT	exon	56013713	56013759	.	-	.	ID=Cattle_Y_E04111;Parent=Cattle_Y_T01804;Dbxref=GeneID:100847998,GenBank:XM_059884236.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100847998;product=allergen Bos d 2-like;transcript_id=Cattle_Y_T01804;gene_id=Cattle_Y_G01062;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884236.1-6
haplotype2-0000357	CAT	exon	56013952	56014053	.	-	.	ID=Cattle_Y_E04112;Parent=Cattle_Y_T01804;Dbxref=GeneID:100847998,GenBank:XM_059884236.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100847998;product=allergen Bos d 2-like;transcript_id=Cattle_Y_T01804;gene_id=Cattle_Y_G01062;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884236.1-5
haplotype2-0000357	CAT	exon	56015211	56015321	.	-	.	ID=Cattle_Y_E04113;Parent=Cattle_Y_T01804;Dbxref=GeneID:100847998,GenBank:XM_059884236.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100847998;product=allergen Bos d 2-like;transcript_id=Cattle_Y_T01804;gene_id=Cattle_Y_G01062;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884236.1-4
haplotype2-0000357	CAT	exon	56017063	56017133	.	-	.	ID=Cattle_Y_E04114;Parent=Cattle_Y_T01804;Dbxref=GeneID:100847998,GenBank:XM_059884236.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100847998;product=allergen Bos d 2-like;transcript_id=Cattle_Y_T01804;gene_id=Cattle_Y_G01062;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884236.1-3
haplotype2-0000357	CAT	exon	56021768	56021907	.	-	.	ID=Cattle_Y_E04115;Parent=Cattle_Y_T01804;Dbxref=GeneID:100847998,GenBank:XM_059884236.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100847998;product=allergen Bos d 2-like;transcript_id=Cattle_Y_T01804;gene_id=Cattle_Y_G01062;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884236.1-2
haplotype2-0000357	CAT	exon	56022366	56022522	.	-	.	ID=Cattle_Y_E04116;Parent=Cattle_Y_T01804;Dbxref=GeneID:100847998,GenBank:XM_059884236.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100847998;product=allergen Bos d 2-like;transcript_id=Cattle_Y_T01804;gene_id=Cattle_Y_G01062;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884236.1-1
haplotype2-0000357	CAT	CDS	56013737	56013759	.	-	2	ID=Cattle_Y_C03599;Parent=Cattle_Y_T01804;Dbxref=GeneID:100847998,GenBank:XP_059740219.1;Name=XP_059740219.1;gbkey=CDS;gene=LOC100847998;product=allergen Bos d 2-like;protein_id=XP_059740219.1;gene_id=Cattle_Y_G01062;transcript_id=Cattle_Y_T01804;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56013952	56014053	.	-	2	ID=Cattle_Y_C03600;Parent=Cattle_Y_T01804;Dbxref=GeneID:100847998,GenBank:XP_059740219.1;Name=XP_059740219.1;gbkey=CDS;gene=LOC100847998;product=allergen Bos d 2-like;protein_id=XP_059740219.1;gene_id=Cattle_Y_G01062;transcript_id=Cattle_Y_T01804;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56015211	56015321	.	-	2	ID=Cattle_Y_C03601;Parent=Cattle_Y_T01804;Dbxref=GeneID:100847998,GenBank:XP_059740219.1;Name=XP_059740219.1;gbkey=CDS;gene=LOC100847998;product=allergen Bos d 2-like;protein_id=XP_059740219.1;gene_id=Cattle_Y_G01062;transcript_id=Cattle_Y_T01804;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56017063	56017133	.	-	1	ID=Cattle_Y_C03602;Parent=Cattle_Y_T01804;Dbxref=GeneID:100847998,GenBank:XP_059740219.1;Name=XP_059740219.1;gbkey=CDS;gene=LOC100847998;product=allergen Bos d 2-like;protein_id=XP_059740219.1;gene_id=Cattle_Y_G01062;transcript_id=Cattle_Y_T01804;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56021768	56021907	.	-	0	ID=Cattle_Y_C03603;Parent=Cattle_Y_T01804;Dbxref=GeneID:100847998,GenBank:XP_059740219.1;Name=XP_059740219.1;gbkey=CDS;gene=LOC100847998;product=allergen Bos d 2-like;protein_id=XP_059740219.1;gene_id=Cattle_Y_G01062;transcript_id=Cattle_Y_T01804;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56022366	56022446	.	-	0	ID=Cattle_Y_C03604;Parent=Cattle_Y_T01804;Dbxref=GeneID:100847998,GenBank:XP_059740219.1;Name=XP_059740219.1;gbkey=CDS;gene=LOC100847998;product=allergen Bos d 2-like;protein_id=XP_059740219.1;gene_id=Cattle_Y_G01062;transcript_id=Cattle_Y_T01804;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	56265777	56265848	.	-	.	ID=Cattle_Y_G01063;Dbxref=GeneID:112445341;Name=TRNAW-CCA;description=transfer RNA tryptophan (anticodon CCA);gbkey=Gene;gene=TRNAW-CCA;gene_biotype=tRNA;gene_id=Cattle_Y_G01063;source_id=gene-TRNAW-CCA-170
haplotype2-0000357	CAT	tRNA	56265777	56265848	.	-	.	ID=Cattle_Y_T01805;Parent=Cattle_Y_G01063;Dbxref=GeneID:112445341;Note=transfer RNA tryptophan (anticodon CCA);anticodon=(pos:2260000..2260002);gbkey=tRNA;gene=TRNAW-CCA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Trp;gene_id=Cattle_Y_G01063;transcript_id=Cattle_Y_T01805;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=rna-TRNAW-CCA-170
haplotype2-0000357	CAT	exon	56265777	56265848	.	-	.	ID=Cattle_Y_E04117;Parent=Cattle_Y_T01805;Dbxref=GeneID:112445341;Note=transfer RNA tryptophan (anticodon CCA);anticodon=(pos:2260000..2260002);gbkey=tRNA;gene=TRNAW-CCA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Trp;gene_id=Cattle_Y_G01063;transcript_id=Cattle_Y_T01805;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=exon-TRNAW-CCA-170-1
haplotype2-0000357	CAT	gene	56280184	56280255	.	+	.	ID=Cattle_Y_G01064;Dbxref=GeneID:112445379;Name=TRNAC-GCA;description=transfer RNA cysteine (anticodon GCA);gbkey=Gene;gene=TRNAC-GCA;gene_biotype=tRNA;gene_id=Cattle_Y_G01064;source_id=gene-TRNAC-GCA-248
haplotype2-0000357	CAT	tRNA	56280184	56280255	.	+	.	ID=Cattle_Y_T01806;Parent=Cattle_Y_G01064;Dbxref=GeneID:112445379;Note=transfer RNA cysteine (anticodon GCA);anticodon=(pos:complement(6359055..6359057));gbkey=tRNA;gene=TRNAC-GCA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Cys;gene_id=Cattle_Y_G01064;transcript_id=Cattle_Y_T01806;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=rna-TRNAC-GCA-248
haplotype2-0000357	CAT	exon	56280184	56280255	.	+	.	ID=Cattle_Y_E04118;Parent=Cattle_Y_T01806;Dbxref=GeneID:112445379;Note=transfer RNA cysteine (anticodon GCA);anticodon=(pos:complement(6359055..6359057));gbkey=tRNA;gene=TRNAC-GCA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Cys;gene_id=Cattle_Y_G01064;transcript_id=Cattle_Y_T01806;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=exon-TRNAC-GCA-248-1
haplotype2-0000357	CAT	gene	56324260	56324332	.	-	.	ID=Cattle_Y_G01065;Dbxref=GeneID:132344399;Name=TRNAC-ACA;description=transfer RNA cysteine (anticodon ACA);gbkey=Gene;gene=TRNAC-ACA;gene_biotype=tRNA;gene_id=Cattle_Y_G01065;source_id=gene-TRNAC-ACA-247
haplotype2-0000357	CAT	tRNA	56324260	56324332	.	-	.	ID=Cattle_Y_T01807;Parent=Cattle_Y_G01065;Dbxref=GeneID:132344399;Note=transfer RNA cysteine (anticodon ACA);anticodon=(pos:2201605..2201607);gbkey=tRNA;gene=TRNAC-ACA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Cys;gene_id=Cattle_Y_G01065;transcript_id=Cattle_Y_T01807;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=rna-TRNAC-ACA-247
haplotype2-0000357	CAT	exon	56324260	56324332	.	-	.	ID=Cattle_Y_E04119;Parent=Cattle_Y_T01807;Dbxref=GeneID:132344399;Note=transfer RNA cysteine (anticodon ACA);anticodon=(pos:2201605..2201607);gbkey=tRNA;gene=TRNAC-ACA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Cys;gene_id=Cattle_Y_G01065;transcript_id=Cattle_Y_T01807;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=exon-TRNAC-ACA-247-1
haplotype2-0000357	CAT	gene	56396289	56396360	.	+	.	ID=Cattle_Y_G01066;Dbxref=GeneID:132344398;Name=TRNAC-ACA;description=transfer RNA cysteine (anticodon ACA);gbkey=Gene;gene=TRNAC-ACA;gene_biotype=tRNA;gene_id=Cattle_Y_G01066;source_id=gene-TRNAC-ACA-249
haplotype2-0000357	CAT	tRNA	56396289	56396360	.	+	.	ID=Cattle_Y_T01808;Parent=Cattle_Y_G01066;Dbxref=GeneID:132344398;Note=transfer RNA cysteine (anticodon ACA);anticodon=(pos:5435069..5435071);gbkey=tRNA;gene=TRNAC-ACA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Cys;gene_id=Cattle_Y_G01066;transcript_id=Cattle_Y_T01808;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=rna-TRNAC-ACA-249
haplotype2-0000357	CAT	exon	56396289	56396360	.	+	.	ID=Cattle_Y_E04120;Parent=Cattle_Y_T01808;Dbxref=GeneID:132344398;Note=transfer RNA cysteine (anticodon ACA);anticodon=(pos:5435069..5435071);gbkey=tRNA;gene=TRNAC-ACA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Cys;gene_id=Cattle_Y_G01066;transcript_id=Cattle_Y_T01808;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=exon-TRNAC-ACA-249-1
haplotype2-0000357	CAT	gene	56401878	56401951	.	-	.	ID=Cattle_Y_G01067;Dbxref=GeneID:132344400;Name=TRNAY-AUA;description=transfer RNA tyrosine (anticodon AUA);gbkey=Gene;gene=TRNAY-AUA;gene_biotype=tRNA;gene_id=Cattle_Y_G01067;source_id=gene-TRNAY-AUA-37
haplotype2-0000357	CAT	tRNA	56401878	56401951	.	-	.	ID=Cattle_Y_T01809;Parent=Cattle_Y_G01067;Dbxref=GeneID:132344400;Note=transfer RNA tyrosine (anticodon AUA);anticodon=(pos:2126218..2126220);gbkey=tRNA;gene=TRNAY-AUA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Tyr;gene_id=Cattle_Y_G01067;transcript_id=Cattle_Y_T01809;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=rna-TRNAY-AUA-37
haplotype2-0000357	CAT	exon	56401878	56401951	.	-	.	ID=Cattle_Y_E04121;Parent=Cattle_Y_T01809;Dbxref=GeneID:132344400;Note=transfer RNA tyrosine (anticodon AUA);anticodon=(pos:2126218..2126220);gbkey=tRNA;gene=TRNAY-AUA;inference=COORDINATES: profile:tRNAscan-SE:2.0.4;product=tRNA-Tyr;gene_id=Cattle_Y_G01067;transcript_id=Cattle_Y_T01809;gene_biotype=tRNA;transcript_biotype=tRNA;source_id=exon-TRNAY-AUA-37-1
haplotype2-0000357	CAT	gene	56748691	56808506	.	+	.	ID=Cattle_Y_G01068;Dbxref=BGD:BT24550,GeneID:505773;Name=LOC505773;description=protein kinase cAMP-dependent X-linked catalytic subunit;gbkey=Gene;gene=LOC505773;gene_biotype=protein_coding;gene_id=Cattle_Y_G01068;source_id=gene-LOC505773-2
haplotype2-0000357	CAT	mRNA	56748691	56808506	.	+	.	ID=Cattle_Y_T01810;Parent=Cattle_Y_G01068;Dbxref=GeneID:505773,GenBank:XM_059884053.1,BGD:BT24550;Name=XM_059884053.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;model_evidence=Supporting evidence includes similarity to: 11 ESTs%2C 5 Proteins%2C 58 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 50 samples with support for all annotated introns;product=protein kinase cAMP-dependent X-linked catalytic subunit%2C transcript variant X1;transcript_id=Cattle_Y_T01810;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884053.1
haplotype2-0000357	CAT	exon	56748691	56749217	.	+	.	ID=Cattle_Y_E04122;Parent=Cattle_Y_T01810;Dbxref=GeneID:505773,GenBank:XM_059884053.1,BGD:BT24550;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X1;transcript_id=Cattle_Y_T01810;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884053.1-1
haplotype2-0000357	CAT	exon	56771006	56771174	.	+	.	ID=Cattle_Y_E04123;Parent=Cattle_Y_T01810;Dbxref=GeneID:505773,GenBank:XM_059884053.1,BGD:BT24550;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X1;transcript_id=Cattle_Y_T01810;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884053.1-1
haplotype2-0000357	CAT	exon	56782890	56783153	.	+	.	ID=Cattle_Y_E04124;Parent=Cattle_Y_T01810;Dbxref=GeneID:505773,GenBank:XM_059884053.1,BGD:BT24550;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X1;transcript_id=Cattle_Y_T01810;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884053.1-1
haplotype2-0000357	CAT	exon	56791220	56791339	.	+	.	ID=Cattle_Y_E04125;Parent=Cattle_Y_T01810;Dbxref=GeneID:505773,GenBank:XM_059884053.1,BGD:BT24550;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X1;transcript_id=Cattle_Y_T01810;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884053.1-1
haplotype2-0000357	CAT	exon	56796401	56796496	.	+	.	ID=Cattle_Y_E04126;Parent=Cattle_Y_T01810;Dbxref=GeneID:505773,GenBank:XM_059884053.1,BGD:BT24550;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X1;transcript_id=Cattle_Y_T01810;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884053.1-1
haplotype2-0000357	CAT	exon	56798298	56798355	.	+	.	ID=Cattle_Y_E04127;Parent=Cattle_Y_T01810;Dbxref=GeneID:505773,GenBank:XM_059884053.1,BGD:BT24550;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X1;transcript_id=Cattle_Y_T01810;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884053.1-1
haplotype2-0000357	CAT	exon	56800215	56800292	.	+	.	ID=Cattle_Y_E04128;Parent=Cattle_Y_T01810;Dbxref=GeneID:505773,GenBank:XM_059884053.1,BGD:BT24550;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X1;transcript_id=Cattle_Y_T01810;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884053.1-1
haplotype2-0000357	CAT	exon	56802141	56802289	.	+	.	ID=Cattle_Y_E04129;Parent=Cattle_Y_T01810;Dbxref=GeneID:505773,GenBank:XM_059884053.1,BGD:BT24550;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X1;transcript_id=Cattle_Y_T01810;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884053.1-8
haplotype2-0000357	CAT	exon	56803289	56808506	.	+	.	ID=Cattle_Y_E04130;Parent=Cattle_Y_T01810;Dbxref=GeneID:505773,GenBank:XM_059884053.1,BGD:BT24550;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X1;transcript_id=Cattle_Y_T01810;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884053.1-9
haplotype2-0000357	CAT	CDS	56749085	56749217	.	+	0	ID=Cattle_Y_C03605;Parent=Cattle_Y_T01810;gene_id=Cattle_Y_G01068;transcript_id=Cattle_Y_T01810;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56771006	56771174	.	+	2	ID=Cattle_Y_C03606;Parent=Cattle_Y_T01810;gene_id=Cattle_Y_G01068;transcript_id=Cattle_Y_T01810;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56782890	56783153	.	+	1	ID=Cattle_Y_C03607;Parent=Cattle_Y_T01810;gene_id=Cattle_Y_G01068;transcript_id=Cattle_Y_T01810;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56791220	56791339	.	+	1	ID=Cattle_Y_C03608;Parent=Cattle_Y_T01810;gene_id=Cattle_Y_G01068;transcript_id=Cattle_Y_T01810;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56796401	56796496	.	+	1	ID=Cattle_Y_C03609;Parent=Cattle_Y_T01810;gene_id=Cattle_Y_G01068;transcript_id=Cattle_Y_T01810;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56798298	56798355	.	+	1	ID=Cattle_Y_C03610;Parent=Cattle_Y_T01810;gene_id=Cattle_Y_G01068;transcript_id=Cattle_Y_T01810;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56800215	56800292	.	+	0	ID=Cattle_Y_C03611;Parent=Cattle_Y_T01810;gene_id=Cattle_Y_G01068;transcript_id=Cattle_Y_T01810;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56802141	56802266	.	+	0	ID=Cattle_Y_C03612;Parent=Cattle_Y_T01810;gene_id=Cattle_Y_G01068;transcript_id=Cattle_Y_T01810;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	56748691	56808506	.	+	.	ID=Cattle_Y_T01811;Parent=Cattle_Y_G01068;Dbxref=GeneID:505773,GenBank:XM_059884054.1,BGD:BT24550;Name=XM_059884054.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;model_evidence=Supporting evidence includes similarity to: 11 ESTs%2C 5 Proteins%2C 55 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 49 samples with support for all annotated introns;product=protein kinase cAMP-dependent X-linked catalytic subunit%2C transcript variant X2;transcript_id=Cattle_Y_T01811;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884054.1
haplotype2-0000357	CAT	exon	56748691	56749217	.	+	.	ID=Cattle_Y_E04131;Parent=Cattle_Y_T01811;Dbxref=GeneID:505773,GenBank:XM_059884054.1,BGD:BT24550;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X2;transcript_id=Cattle_Y_T01811;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884054.1-1
haplotype2-0000357	CAT	exon	56771006	56771174	.	+	.	ID=Cattle_Y_E04132;Parent=Cattle_Y_T01811;Dbxref=GeneID:505773,GenBank:XM_059884054.1,BGD:BT24550;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X2;transcript_id=Cattle_Y_T01811;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884054.1-1
haplotype2-0000357	CAT	exon	56782890	56783153	.	+	.	ID=Cattle_Y_E04133;Parent=Cattle_Y_T01811;Dbxref=GeneID:505773,GenBank:XM_059884054.1,BGD:BT24550;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X2;transcript_id=Cattle_Y_T01811;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884054.1-1
haplotype2-0000357	CAT	exon	56791220	56791339	.	+	.	ID=Cattle_Y_E04134;Parent=Cattle_Y_T01811;Dbxref=GeneID:505773,GenBank:XM_059884054.1,BGD:BT24550;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X2;transcript_id=Cattle_Y_T01811;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884054.1-1
haplotype2-0000357	CAT	exon	56796401	56796496	.	+	.	ID=Cattle_Y_E04135;Parent=Cattle_Y_T01811;Dbxref=GeneID:505773,GenBank:XM_059884054.1,BGD:BT24550;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X2;transcript_id=Cattle_Y_T01811;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884054.1-1
haplotype2-0000357	CAT	exon	56798298	56798355	.	+	.	ID=Cattle_Y_E04136;Parent=Cattle_Y_T01811;Dbxref=GeneID:505773,GenBank:XM_059884054.1,BGD:BT24550;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X2;transcript_id=Cattle_Y_T01811;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884054.1-1
haplotype2-0000357	CAT	exon	56800215	56800292	.	+	.	ID=Cattle_Y_E04137;Parent=Cattle_Y_T01811;Dbxref=GeneID:505773,GenBank:XM_059884054.1,BGD:BT24550;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X2;transcript_id=Cattle_Y_T01811;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884054.1-1
haplotype2-0000357	CAT	exon	56802141	56802289	.	+	.	ID=Cattle_Y_E04138;Parent=Cattle_Y_T01811;Dbxref=GeneID:505773,GenBank:XM_059884054.1,BGD:BT24550;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X2;transcript_id=Cattle_Y_T01811;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884054.1-8
haplotype2-0000357	CAT	exon	56803293	56808506	.	+	.	ID=Cattle_Y_E04139;Parent=Cattle_Y_T01811;Dbxref=GeneID:505773,GenBank:XM_059884054.1,BGD:BT24550;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X2;transcript_id=Cattle_Y_T01811;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884054.1-9
haplotype2-0000357	CAT	CDS	56749085	56749217	.	+	0	ID=Cattle_Y_C03613;Parent=Cattle_Y_T01811;gene_id=Cattle_Y_G01068;transcript_id=Cattle_Y_T01811;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56771006	56771174	.	+	2	ID=Cattle_Y_C03614;Parent=Cattle_Y_T01811;gene_id=Cattle_Y_G01068;transcript_id=Cattle_Y_T01811;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56782890	56783153	.	+	1	ID=Cattle_Y_C03615;Parent=Cattle_Y_T01811;gene_id=Cattle_Y_G01068;transcript_id=Cattle_Y_T01811;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56791220	56791339	.	+	1	ID=Cattle_Y_C03616;Parent=Cattle_Y_T01811;gene_id=Cattle_Y_G01068;transcript_id=Cattle_Y_T01811;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56796401	56796496	.	+	1	ID=Cattle_Y_C03617;Parent=Cattle_Y_T01811;gene_id=Cattle_Y_G01068;transcript_id=Cattle_Y_T01811;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56798298	56798355	.	+	1	ID=Cattle_Y_C03618;Parent=Cattle_Y_T01811;gene_id=Cattle_Y_G01068;transcript_id=Cattle_Y_T01811;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56800215	56800292	.	+	0	ID=Cattle_Y_C03619;Parent=Cattle_Y_T01811;gene_id=Cattle_Y_G01068;transcript_id=Cattle_Y_T01811;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56802141	56802266	.	+	0	ID=Cattle_Y_C03620;Parent=Cattle_Y_T01811;gene_id=Cattle_Y_G01068;transcript_id=Cattle_Y_T01811;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	56749150	56808506	.	+	.	ID=Cattle_Y_T01812;Parent=Cattle_Y_G01068;Dbxref=GeneID:505773,GenBank:XM_059884055.1,BGD:BT24550;Name=XM_059884055.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;model_evidence=Supporting evidence includes similarity to: 10 ESTs%2C 5 Proteins%2C 58 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 19 samples with support for all annotated introns;product=protein kinase cAMP-dependent X-linked catalytic subunit%2C transcript variant X3;transcript_id=Cattle_Y_T01812;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884055.1
haplotype2-0000357	CAT	exon	56749150	56749217	.	+	.	ID=Cattle_Y_E04140;Parent=Cattle_Y_T01812;Dbxref=GeneID:505773,GenBank:XM_059884055.1,BGD:BT24550;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X3;transcript_id=Cattle_Y_T01812;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884055.1-1
haplotype2-0000357	CAT	exon	56768039	56768092	.	+	.	ID=Cattle_Y_E04141;Parent=Cattle_Y_T01812;Dbxref=GeneID:505773,GenBank:XM_059884055.1,BGD:BT24550;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X3;transcript_id=Cattle_Y_T01812;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884055.1-2
haplotype2-0000357	CAT	exon	56771006	56771174	.	+	.	ID=Cattle_Y_E04142;Parent=Cattle_Y_T01812;Dbxref=GeneID:505773,GenBank:XM_059884055.1,BGD:BT24550;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X3;transcript_id=Cattle_Y_T01812;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884055.1-3
haplotype2-0000357	CAT	exon	56782890	56783153	.	+	.	ID=Cattle_Y_E04143;Parent=Cattle_Y_T01812;Dbxref=GeneID:505773,GenBank:XM_059884055.1,BGD:BT24550;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X3;transcript_id=Cattle_Y_T01812;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884055.1-4
haplotype2-0000357	CAT	exon	56791220	56791339	.	+	.	ID=Cattle_Y_E04144;Parent=Cattle_Y_T01812;Dbxref=GeneID:505773,GenBank:XM_059884055.1,BGD:BT24550;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X3;transcript_id=Cattle_Y_T01812;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884055.1-5
haplotype2-0000357	CAT	exon	56796401	56796496	.	+	.	ID=Cattle_Y_E04145;Parent=Cattle_Y_T01812;Dbxref=GeneID:505773,GenBank:XM_059884055.1,BGD:BT24550;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X3;transcript_id=Cattle_Y_T01812;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884055.1-6
haplotype2-0000357	CAT	exon	56798298	56798355	.	+	.	ID=Cattle_Y_E04146;Parent=Cattle_Y_T01812;Dbxref=GeneID:505773,GenBank:XM_059884055.1,BGD:BT24550;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X3;transcript_id=Cattle_Y_T01812;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884055.1-7
haplotype2-0000357	CAT	exon	56800215	56800292	.	+	.	ID=Cattle_Y_E04147;Parent=Cattle_Y_T01812;Dbxref=GeneID:505773,GenBank:XM_059884055.1,BGD:BT24550;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X3;transcript_id=Cattle_Y_T01812;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884055.1-8
haplotype2-0000357	CAT	exon	56802141	56802289	.	+	.	ID=Cattle_Y_E04148;Parent=Cattle_Y_T01812;Dbxref=GeneID:505773,GenBank:XM_059884055.1,BGD:BT24550;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X3;transcript_id=Cattle_Y_T01812;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884055.1-9
haplotype2-0000357	CAT	exon	56803289	56808506	.	+	.	ID=Cattle_Y_E04149;Parent=Cattle_Y_T01812;Dbxref=GeneID:505773,GenBank:XM_059884055.1,BGD:BT24550;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC505773;product=protein kinase cAMP-dependent X-linked catalytic subunit, transcript variant X3;transcript_id=Cattle_Y_T01812;gene_id=Cattle_Y_G01068;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884055.1-10
haplotype2-0000357	CAT	CDS	56768071	56768092	.	+	0	ID=Cattle_Y_C03621;Parent=Cattle_Y_T01812;Dbxref=GeneID:505773,GenBank:XP_059740038.1,BGD:BT24550;Name=XP_059740038.1;gbkey=CDS;gene=LOC505773;product=cAMP-dependent protein kinase catalytic subunit PRKX isoform X2;protein_id=XP_059740038.1;gene_id=Cattle_Y_G01068;transcript_id=Cattle_Y_T01812;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56771006	56771174	.	+	2	ID=Cattle_Y_C03622;Parent=Cattle_Y_T01812;Dbxref=GeneID:505773,GenBank:XP_059740038.1,BGD:BT24550;Name=XP_059740038.1;gbkey=CDS;gene=LOC505773;product=cAMP-dependent protein kinase catalytic subunit PRKX isoform X2;protein_id=XP_059740038.1;gene_id=Cattle_Y_G01068;transcript_id=Cattle_Y_T01812;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56782890	56783153	.	+	1	ID=Cattle_Y_C03623;Parent=Cattle_Y_T01812;Dbxref=GeneID:505773,GenBank:XP_059740038.1,BGD:BT24550;Name=XP_059740038.1;gbkey=CDS;gene=LOC505773;product=cAMP-dependent protein kinase catalytic subunit PRKX isoform X2;protein_id=XP_059740038.1;gene_id=Cattle_Y_G01068;transcript_id=Cattle_Y_T01812;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56791220	56791339	.	+	1	ID=Cattle_Y_C03624;Parent=Cattle_Y_T01812;Dbxref=GeneID:505773,GenBank:XP_059740038.1,BGD:BT24550;Name=XP_059740038.1;gbkey=CDS;gene=LOC505773;product=cAMP-dependent protein kinase catalytic subunit PRKX isoform X2;protein_id=XP_059740038.1;gene_id=Cattle_Y_G01068;transcript_id=Cattle_Y_T01812;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56796401	56796496	.	+	1	ID=Cattle_Y_C03625;Parent=Cattle_Y_T01812;Dbxref=GeneID:505773,GenBank:XP_059740038.1,BGD:BT24550;Name=XP_059740038.1;gbkey=CDS;gene=LOC505773;product=cAMP-dependent protein kinase catalytic subunit PRKX isoform X2;protein_id=XP_059740038.1;gene_id=Cattle_Y_G01068;transcript_id=Cattle_Y_T01812;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56798298	56798355	.	+	1	ID=Cattle_Y_C03626;Parent=Cattle_Y_T01812;Dbxref=GeneID:505773,GenBank:XP_059740038.1,BGD:BT24550;Name=XP_059740038.1;gbkey=CDS;gene=LOC505773;product=cAMP-dependent protein kinase catalytic subunit PRKX isoform X2;protein_id=XP_059740038.1;gene_id=Cattle_Y_G01068;transcript_id=Cattle_Y_T01812;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56800215	56800292	.	+	0	ID=Cattle_Y_C03627;Parent=Cattle_Y_T01812;Dbxref=GeneID:505773,GenBank:XP_059740038.1,BGD:BT24550;Name=XP_059740038.1;gbkey=CDS;gene=LOC505773;product=cAMP-dependent protein kinase catalytic subunit PRKX isoform X2;protein_id=XP_059740038.1;gene_id=Cattle_Y_G01068;transcript_id=Cattle_Y_T01812;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56802141	56802266	.	+	0	ID=Cattle_Y_C03628;Parent=Cattle_Y_T01812;Dbxref=GeneID:505773,GenBank:XP_059740038.1,BGD:BT24550;Name=XP_059740038.1;gbkey=CDS;gene=LOC505773;product=cAMP-dependent protein kinase catalytic subunit PRKX isoform X2;protein_id=XP_059740038.1;gene_id=Cattle_Y_G01068;transcript_id=Cattle_Y_T01812;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	56929461	56958567	.	+	.	ID=Cattle_Y_G01069;Dbxref=BGD:BT19396,GeneID:786844,VGNC:VGNC:31774;Name=MXRA5;description=matrix remodeling associated 5;gbkey=Gene;gene=MXRA5;gene_biotype=protein_coding;gene_id=Cattle_Y_G01069;source_id=gene-MXRA5-2
haplotype2-0000357	CAT	mRNA	56929461	56958567	.	+	.	ID=Cattle_Y_T01813;Parent=Cattle_Y_G01069;Dbxref=GeneID:786844,GenBank:XM_002700420.6,BGD:BT19396,VGNC:VGNC:31774;Name=XM_002700420.6;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=MXRA5;model_evidence=Supporting evidence includes similarity to: 20 ESTs%2C 3 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 5 samples with support for all annotated introns;product=matrix remodeling associated 5%2C transcript variant X2;transcript_id=Cattle_Y_T01813;gene_id=Cattle_Y_G01069;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_002700420.6
haplotype2-0000357	CAT	exon	56929461	56929604	.	+	.	ID=Cattle_Y_E04150;Parent=Cattle_Y_T01813;Dbxref=GeneID:786844,GenBank:XM_002700420.6,BGD:BT19396,VGNC:VGNC:31774;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=MXRA5;product=matrix remodeling associated 5, transcript variant X2;transcript_id=Cattle_Y_T01813;gene_id=Cattle_Y_G01069;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_002700420.6-1
haplotype2-0000357	CAT	exon	56933048	56933266	.	+	.	ID=Cattle_Y_E04151;Parent=Cattle_Y_T01813;Dbxref=GeneID:786844,GenBank:XM_002700420.6,BGD:BT19396,VGNC:VGNC:31774;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=MXRA5;product=matrix remodeling associated 5, transcript variant X2;transcript_id=Cattle_Y_T01813;gene_id=Cattle_Y_G01069;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_002700420.6-1
haplotype2-0000357	CAT	exon	56936239	56936368	.	+	.	ID=Cattle_Y_E04152;Parent=Cattle_Y_T01813;Dbxref=GeneID:786844,GenBank:XM_002700420.6,BGD:BT19396,VGNC:VGNC:31774;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=MXRA5;product=matrix remodeling associated 5, transcript variant X2;transcript_id=Cattle_Y_T01813;gene_id=Cattle_Y_G01069;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_002700420.6-1
haplotype2-0000357	CAT	exon	56937099	56937489	.	+	.	ID=Cattle_Y_E04153;Parent=Cattle_Y_T01813;Dbxref=GeneID:786844,GenBank:XM_002700420.6,BGD:BT19396,VGNC:VGNC:31774;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=MXRA5;product=matrix remodeling associated 5, transcript variant X2;transcript_id=Cattle_Y_T01813;gene_id=Cattle_Y_G01069;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_002700420.6-1
haplotype2-0000357	CAT	exon	56938860	56943863	.	+	.	ID=Cattle_Y_E04154;Parent=Cattle_Y_T01813;Dbxref=GeneID:786844,GenBank:XM_002700420.6,BGD:BT19396,VGNC:VGNC:31774;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=MXRA5;product=matrix remodeling associated 5, transcript variant X2;transcript_id=Cattle_Y_T01813;gene_id=Cattle_Y_G01069;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_002700420.6-1
haplotype2-0000357	CAT	exon	56948224	56949124	.	+	.	ID=Cattle_Y_E04155;Parent=Cattle_Y_T01813;Dbxref=GeneID:786844,GenBank:XM_002700420.6,BGD:BT19396,VGNC:VGNC:31774;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=MXRA5;product=matrix remodeling associated 5, transcript variant X2;transcript_id=Cattle_Y_T01813;gene_id=Cattle_Y_G01069;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_002700420.6-1
haplotype2-0000357	CAT	exon	56955213	56958567	.	+	.	ID=Cattle_Y_E04156;Parent=Cattle_Y_T01813;Dbxref=GeneID:786844,GenBank:XM_002700420.6,BGD:BT19396,VGNC:VGNC:31774;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=MXRA5;product=matrix remodeling associated 5, transcript variant X2;transcript_id=Cattle_Y_T01813;gene_id=Cattle_Y_G01069;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_002700420.6-7
haplotype2-0000357	CAT	CDS	56929558	56929604	.	+	0	ID=Cattle_Y_C03629;Parent=Cattle_Y_T01813;gene_id=Cattle_Y_G01069;transcript_id=Cattle_Y_T01813;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56933048	56933266	.	+	1	ID=Cattle_Y_C03630;Parent=Cattle_Y_T01813;gene_id=Cattle_Y_G01069;transcript_id=Cattle_Y_T01813;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56936239	56936368	.	+	1	ID=Cattle_Y_C03631;Parent=Cattle_Y_T01813;gene_id=Cattle_Y_G01069;transcript_id=Cattle_Y_T01813;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56937099	56937489	.	+	0	ID=Cattle_Y_C03632;Parent=Cattle_Y_T01813;gene_id=Cattle_Y_G01069;transcript_id=Cattle_Y_T01813;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56938860	56943863	.	+	2	ID=Cattle_Y_C03633;Parent=Cattle_Y_T01813;gene_id=Cattle_Y_G01069;transcript_id=Cattle_Y_T01813;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56948224	56949124	.	+	2	ID=Cattle_Y_C03634;Parent=Cattle_Y_T01813;gene_id=Cattle_Y_G01069;transcript_id=Cattle_Y_T01813;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56955213	56957121	.	+	1	ID=Cattle_Y_C03635;Parent=Cattle_Y_T01813;gene_id=Cattle_Y_G01069;transcript_id=Cattle_Y_T01813;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	56929461	56958567	.	+	.	ID=Cattle_Y_T01814;Parent=Cattle_Y_G01069;Dbxref=GeneID:786844,GenBank:XM_005228468.5,BGD:BT19396,VGNC:VGNC:31774;Name=XM_005228468.5;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=MXRA5;model_evidence=Supporting evidence includes similarity to: 21 ESTs%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=matrix remodeling associated 5%2C transcript variant X1;transcript_id=Cattle_Y_T01814;gene_id=Cattle_Y_G01069;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_005228468.5
haplotype2-0000357	CAT	exon	56929461	56929604	.	+	.	ID=Cattle_Y_E04157;Parent=Cattle_Y_T01814;Dbxref=GeneID:786844,GenBank:XM_005228468.5,BGD:BT19396,VGNC:VGNC:31774;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=MXRA5;product=matrix remodeling associated 5, transcript variant X1;transcript_id=Cattle_Y_T01814;gene_id=Cattle_Y_G01069;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228468.5-1
haplotype2-0000357	CAT	exon	56933048	56933266	.	+	.	ID=Cattle_Y_E04158;Parent=Cattle_Y_T01814;Dbxref=GeneID:786844,GenBank:XM_005228468.5,BGD:BT19396,VGNC:VGNC:31774;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=MXRA5;product=matrix remodeling associated 5, transcript variant X1;transcript_id=Cattle_Y_T01814;gene_id=Cattle_Y_G01069;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228468.5-1
haplotype2-0000357	CAT	exon	56936239	56936368	.	+	.	ID=Cattle_Y_E04159;Parent=Cattle_Y_T01814;Dbxref=GeneID:786844,GenBank:XM_005228468.5,BGD:BT19396,VGNC:VGNC:31774;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=MXRA5;product=matrix remodeling associated 5, transcript variant X1;transcript_id=Cattle_Y_T01814;gene_id=Cattle_Y_G01069;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228468.5-1
haplotype2-0000357	CAT	exon	56937099	56937489	.	+	.	ID=Cattle_Y_E04160;Parent=Cattle_Y_T01814;Dbxref=GeneID:786844,GenBank:XM_005228468.5,BGD:BT19396,VGNC:VGNC:31774;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=MXRA5;product=matrix remodeling associated 5, transcript variant X1;transcript_id=Cattle_Y_T01814;gene_id=Cattle_Y_G01069;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228468.5-1
haplotype2-0000357	CAT	exon	56938860	56943863	.	+	.	ID=Cattle_Y_E04161;Parent=Cattle_Y_T01814;Dbxref=GeneID:786844,GenBank:XM_005228468.5,BGD:BT19396,VGNC:VGNC:31774;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=MXRA5;product=matrix remodeling associated 5, transcript variant X1;transcript_id=Cattle_Y_T01814;gene_id=Cattle_Y_G01069;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228468.5-1
haplotype2-0000357	CAT	exon	56948218	56949124	.	+	.	ID=Cattle_Y_E04162;Parent=Cattle_Y_T01814;Dbxref=GeneID:786844,GenBank:XM_005228468.5,BGD:BT19396,VGNC:VGNC:31774;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=MXRA5;product=matrix remodeling associated 5, transcript variant X1;transcript_id=Cattle_Y_T01814;gene_id=Cattle_Y_G01069;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228468.5-1
haplotype2-0000357	CAT	exon	56955213	56958567	.	+	.	ID=Cattle_Y_E04163;Parent=Cattle_Y_T01814;Dbxref=GeneID:786844,GenBank:XM_005228468.5,BGD:BT19396,VGNC:VGNC:31774;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=MXRA5;product=matrix remodeling associated 5, transcript variant X1;transcript_id=Cattle_Y_T01814;gene_id=Cattle_Y_G01069;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228468.5-7
haplotype2-0000357	CAT	CDS	56929558	56929604	.	+	0	ID=Cattle_Y_C03636;Parent=Cattle_Y_T01814;gene_id=Cattle_Y_G01069;transcript_id=Cattle_Y_T01814;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56933048	56933266	.	+	1	ID=Cattle_Y_C03637;Parent=Cattle_Y_T01814;gene_id=Cattle_Y_G01069;transcript_id=Cattle_Y_T01814;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56936239	56936368	.	+	1	ID=Cattle_Y_C03638;Parent=Cattle_Y_T01814;gene_id=Cattle_Y_G01069;transcript_id=Cattle_Y_T01814;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56937099	56937489	.	+	0	ID=Cattle_Y_C03639;Parent=Cattle_Y_T01814;gene_id=Cattle_Y_G01069;transcript_id=Cattle_Y_T01814;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56938860	56943863	.	+	2	ID=Cattle_Y_C03640;Parent=Cattle_Y_T01814;gene_id=Cattle_Y_G01069;transcript_id=Cattle_Y_T01814;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56948218	56949124	.	+	2	ID=Cattle_Y_C03641;Parent=Cattle_Y_T01814;gene_id=Cattle_Y_G01069;transcript_id=Cattle_Y_T01814;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	56955213	56957121	.	+	1	ID=Cattle_Y_C03642;Parent=Cattle_Y_T01814;gene_id=Cattle_Y_G01069;transcript_id=Cattle_Y_T01814;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	57035111	57086572	.	-	.	ID=Cattle_Y_G01070;Dbxref=GeneID:100336572,VGNC:VGNC:50166;Name=ARSH;description=arylsulfatase family member H;gbkey=Gene;gene=ARSH;gene_biotype=protein_coding;gene_id=Cattle_Y_G01070;source_id=gene-ARSH-2
haplotype2-0000357	CAT	mRNA	57035111	57086572	.	-	.	ID=Cattle_Y_T01815;Parent=Cattle_Y_G01070;Dbxref=GeneID:100336572,GenBank:XM_059884024.1,VGNC:VGNC:50166;Name=XM_059884024.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=ARSH;model_evidence=Supporting evidence includes similarity to: 25 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=arylsulfatase family member H%2C transcript variant X1;transcript_id=Cattle_Y_T01815;gene_id=Cattle_Y_G01070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884024.1
haplotype2-0000357	CAT	exon	57035111	57036573	.	-	.	ID=Cattle_Y_E04164;Parent=Cattle_Y_T01815;Dbxref=GeneID:100336572,GenBank:XM_059884024.1,VGNC:VGNC:50166;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=ARSH;product=arylsulfatase family member H, transcript variant X1;transcript_id=Cattle_Y_T01815;gene_id=Cattle_Y_G01070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884024.1-11
haplotype2-0000357	CAT	exon	57038796	57038917	.	-	.	ID=Cattle_Y_E04165;Parent=Cattle_Y_T01815;Dbxref=GeneID:100336572,GenBank:XM_059884024.1,VGNC:VGNC:50166;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=ARSH;product=arylsulfatase family member H, transcript variant X1;transcript_id=Cattle_Y_T01815;gene_id=Cattle_Y_G01070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884024.1-10
haplotype2-0000357	CAT	exon	57040701	57040863	.	-	.	ID=Cattle_Y_E04166;Parent=Cattle_Y_T01815;Dbxref=GeneID:100336572,GenBank:XM_059884024.1,VGNC:VGNC:50166;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=ARSH;product=arylsulfatase family member H, transcript variant X1;transcript_id=Cattle_Y_T01815;gene_id=Cattle_Y_G01070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884024.1-9
haplotype2-0000357	CAT	exon	57042235	57042369	.	-	.	ID=Cattle_Y_E04167;Parent=Cattle_Y_T01815;Dbxref=GeneID:100336572,GenBank:XM_059884024.1,VGNC:VGNC:50166;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=ARSH;product=arylsulfatase family member H, transcript variant X1;transcript_id=Cattle_Y_T01815;gene_id=Cattle_Y_G01070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884024.1-8
haplotype2-0000357	CAT	exon	57044330	57044466	.	-	.	ID=Cattle_Y_E04168;Parent=Cattle_Y_T01815;Dbxref=GeneID:100336572,GenBank:XM_059884024.1,VGNC:VGNC:50166;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=ARSH;product=arylsulfatase family member H, transcript variant X1;transcript_id=Cattle_Y_T01815;gene_id=Cattle_Y_G01070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884024.1-7
haplotype2-0000357	CAT	exon	57045095	57045518	.	-	.	ID=Cattle_Y_E04169;Parent=Cattle_Y_T01815;Dbxref=GeneID:100336572,GenBank:XM_059884024.1,VGNC:VGNC:50166;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=ARSH;product=arylsulfatase family member H, transcript variant X1;transcript_id=Cattle_Y_T01815;gene_id=Cattle_Y_G01070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884024.1-6
haplotype2-0000357	CAT	exon	57047139	57047264	.	-	.	ID=Cattle_Y_E04170;Parent=Cattle_Y_T01815;Dbxref=GeneID:100336572,GenBank:XM_059884024.1,VGNC:VGNC:50166;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=ARSH;product=arylsulfatase family member H, transcript variant X1;transcript_id=Cattle_Y_T01815;gene_id=Cattle_Y_G01070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884024.1-5
haplotype2-0000357	CAT	exon	57048350	57048471	.	-	.	ID=Cattle_Y_E04171;Parent=Cattle_Y_T01815;Dbxref=GeneID:100336572,GenBank:XM_059884024.1,VGNC:VGNC:50166;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=ARSH;product=arylsulfatase family member H, transcript variant X1;transcript_id=Cattle_Y_T01815;gene_id=Cattle_Y_G01070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884024.1-4
haplotype2-0000357	CAT	exon	57049157	57049306	.	-	.	ID=Cattle_Y_E04172;Parent=Cattle_Y_T01815;Dbxref=GeneID:100336572,GenBank:XM_059884024.1,VGNC:VGNC:50166;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=ARSH;product=arylsulfatase family member H, transcript variant X1;transcript_id=Cattle_Y_T01815;gene_id=Cattle_Y_G01070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884024.1-3
haplotype2-0000357	CAT	exon	57052039	57052077	.	-	.	ID=Cattle_Y_E04173;Parent=Cattle_Y_T01815;Dbxref=GeneID:100336572,GenBank:XM_059884024.1,VGNC:VGNC:50166;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=ARSH;product=arylsulfatase family member H, transcript variant X1;transcript_id=Cattle_Y_T01815;gene_id=Cattle_Y_G01070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884024.1-2
haplotype2-0000357	CAT	exon	57085837	57086572	.	-	.	ID=Cattle_Y_E04174;Parent=Cattle_Y_T01815;Dbxref=GeneID:100336572,GenBank:XM_059884024.1,VGNC:VGNC:50166;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=ARSH;product=arylsulfatase family member H, transcript variant X1;transcript_id=Cattle_Y_T01815;gene_id=Cattle_Y_G01070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884024.1-1
haplotype2-0000357	CAT	CDS	57036206	57036573	.	-	2	ID=Cattle_Y_C03643;Parent=Cattle_Y_T01815;Dbxref=GeneID:100336572,GenBank:XP_059740007.1,VGNC:VGNC:50166;Name=XP_059740007.1;gbkey=CDS;gene=ARSH;product=arylsulfatase H;protein_id=XP_059740007.1;gene_id=Cattle_Y_G01070;transcript_id=Cattle_Y_T01815;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57038796	57038917	.	-	1	ID=Cattle_Y_C03644;Parent=Cattle_Y_T01815;Dbxref=GeneID:100336572,GenBank:XP_059740007.1,VGNC:VGNC:50166;Name=XP_059740007.1;gbkey=CDS;gene=ARSH;product=arylsulfatase H;protein_id=XP_059740007.1;gene_id=Cattle_Y_G01070;transcript_id=Cattle_Y_T01815;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57040701	57040863	.	-	2	ID=Cattle_Y_C03645;Parent=Cattle_Y_T01815;Dbxref=GeneID:100336572,GenBank:XP_059740007.1,VGNC:VGNC:50166;Name=XP_059740007.1;gbkey=CDS;gene=ARSH;product=arylsulfatase H;protein_id=XP_059740007.1;gene_id=Cattle_Y_G01070;transcript_id=Cattle_Y_T01815;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57042235	57042369	.	-	2	ID=Cattle_Y_C03646;Parent=Cattle_Y_T01815;Dbxref=GeneID:100336572,GenBank:XP_059740007.1,VGNC:VGNC:50166;Name=XP_059740007.1;gbkey=CDS;gene=ARSH;product=arylsulfatase H;protein_id=XP_059740007.1;gene_id=Cattle_Y_G01070;transcript_id=Cattle_Y_T01815;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57044330	57044466	.	-	1	ID=Cattle_Y_C03647;Parent=Cattle_Y_T01815;Dbxref=GeneID:100336572,GenBank:XP_059740007.1,VGNC:VGNC:50166;Name=XP_059740007.1;gbkey=CDS;gene=ARSH;product=arylsulfatase H;protein_id=XP_059740007.1;gene_id=Cattle_Y_G01070;transcript_id=Cattle_Y_T01815;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57045095	57045518	.	-	2	ID=Cattle_Y_C03648;Parent=Cattle_Y_T01815;Dbxref=GeneID:100336572,GenBank:XP_059740007.1,VGNC:VGNC:50166;Name=XP_059740007.1;gbkey=CDS;gene=ARSH;product=arylsulfatase H;protein_id=XP_059740007.1;gene_id=Cattle_Y_G01070;transcript_id=Cattle_Y_T01815;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57047139	57047264	.	-	2	ID=Cattle_Y_C03649;Parent=Cattle_Y_T01815;Dbxref=GeneID:100336572,GenBank:XP_059740007.1,VGNC:VGNC:50166;Name=XP_059740007.1;gbkey=CDS;gene=ARSH;product=arylsulfatase H;protein_id=XP_059740007.1;gene_id=Cattle_Y_G01070;transcript_id=Cattle_Y_T01815;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57048350	57048471	.	-	1	ID=Cattle_Y_C03650;Parent=Cattle_Y_T01815;Dbxref=GeneID:100336572,GenBank:XP_059740007.1,VGNC:VGNC:50166;Name=XP_059740007.1;gbkey=CDS;gene=ARSH;product=arylsulfatase H;protein_id=XP_059740007.1;gene_id=Cattle_Y_G01070;transcript_id=Cattle_Y_T01815;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57049157	57049306	.	-	1	ID=Cattle_Y_C03651;Parent=Cattle_Y_T01815;Dbxref=GeneID:100336572,GenBank:XP_059740007.1,VGNC:VGNC:50166;Name=XP_059740007.1;gbkey=CDS;gene=ARSH;product=arylsulfatase H;protein_id=XP_059740007.1;gene_id=Cattle_Y_G01070;transcript_id=Cattle_Y_T01815;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57052039	57052061	.	-	0	ID=Cattle_Y_C03652;Parent=Cattle_Y_T01815;Dbxref=GeneID:100336572,GenBank:XP_059740007.1,VGNC:VGNC:50166;Name=XP_059740007.1;gbkey=CDS;gene=ARSH;product=arylsulfatase H;protein_id=XP_059740007.1;gene_id=Cattle_Y_G01070;transcript_id=Cattle_Y_T01815;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57035111	57086572	.	-	.	ID=Cattle_Y_T01816;Parent=Cattle_Y_G01070;Dbxref=GeneID:100336572,GenBank:XM_059884025.1,VGNC:VGNC:50166;Name=XM_059884025.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=ARSH;model_evidence=Supporting evidence includes similarity to: 25 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments;product=arylsulfatase family member H%2C transcript variant X2;transcript_id=Cattle_Y_T01816;gene_id=Cattle_Y_G01070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884025.1
haplotype2-0000357	CAT	exon	57035111	57036573	.	-	.	ID=Cattle_Y_E04175;Parent=Cattle_Y_T01816;Dbxref=GeneID:100336572,GenBank:XM_059884025.1,VGNC:VGNC:50166;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=ARSH;product=arylsulfatase family member H, transcript variant X2;transcript_id=Cattle_Y_T01816;gene_id=Cattle_Y_G01070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884025.1-12
haplotype2-0000357	CAT	exon	57038796	57038917	.	-	.	ID=Cattle_Y_E04176;Parent=Cattle_Y_T01816;Dbxref=GeneID:100336572,GenBank:XM_059884025.1,VGNC:VGNC:50166;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=ARSH;product=arylsulfatase family member H, transcript variant X2;transcript_id=Cattle_Y_T01816;gene_id=Cattle_Y_G01070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884025.1-11
haplotype2-0000357	CAT	exon	57040701	57040863	.	-	.	ID=Cattle_Y_E04177;Parent=Cattle_Y_T01816;Dbxref=GeneID:100336572,GenBank:XM_059884025.1,VGNC:VGNC:50166;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=ARSH;product=arylsulfatase family member H, transcript variant X2;transcript_id=Cattle_Y_T01816;gene_id=Cattle_Y_G01070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884025.1-10
haplotype2-0000357	CAT	exon	57042235	57042369	.	-	.	ID=Cattle_Y_E04178;Parent=Cattle_Y_T01816;Dbxref=GeneID:100336572,GenBank:XM_059884025.1,VGNC:VGNC:50166;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=ARSH;product=arylsulfatase family member H, transcript variant X2;transcript_id=Cattle_Y_T01816;gene_id=Cattle_Y_G01070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884025.1-9
haplotype2-0000357	CAT	exon	57044330	57044466	.	-	.	ID=Cattle_Y_E04179;Parent=Cattle_Y_T01816;Dbxref=GeneID:100336572,GenBank:XM_059884025.1,VGNC:VGNC:50166;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=ARSH;product=arylsulfatase family member H, transcript variant X2;transcript_id=Cattle_Y_T01816;gene_id=Cattle_Y_G01070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884025.1-8
haplotype2-0000357	CAT	exon	57045095	57045518	.	-	.	ID=Cattle_Y_E04180;Parent=Cattle_Y_T01816;Dbxref=GeneID:100336572,GenBank:XM_059884025.1,VGNC:VGNC:50166;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=ARSH;product=arylsulfatase family member H, transcript variant X2;transcript_id=Cattle_Y_T01816;gene_id=Cattle_Y_G01070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884025.1-7
haplotype2-0000357	CAT	exon	57047139	57047264	.	-	.	ID=Cattle_Y_E04181;Parent=Cattle_Y_T01816;Dbxref=GeneID:100336572,GenBank:XM_059884025.1,VGNC:VGNC:50166;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=ARSH;product=arylsulfatase family member H, transcript variant X2;transcript_id=Cattle_Y_T01816;gene_id=Cattle_Y_G01070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884025.1-6
haplotype2-0000357	CAT	exon	57048350	57048471	.	-	.	ID=Cattle_Y_E04182;Parent=Cattle_Y_T01816;Dbxref=GeneID:100336572,GenBank:XM_059884025.1,VGNC:VGNC:50166;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=ARSH;product=arylsulfatase family member H, transcript variant X2;transcript_id=Cattle_Y_T01816;gene_id=Cattle_Y_G01070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884025.1-5
haplotype2-0000357	CAT	exon	57049157	57049306	.	-	.	ID=Cattle_Y_E04183;Parent=Cattle_Y_T01816;Dbxref=GeneID:100336572,GenBank:XM_059884025.1,VGNC:VGNC:50166;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=ARSH;product=arylsulfatase family member H, transcript variant X2;transcript_id=Cattle_Y_T01816;gene_id=Cattle_Y_G01070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884025.1-4
haplotype2-0000357	CAT	exon	57052039	57052077	.	-	.	ID=Cattle_Y_E04184;Parent=Cattle_Y_T01816;Dbxref=GeneID:100336572,GenBank:XM_059884025.1,VGNC:VGNC:50166;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=ARSH;product=arylsulfatase family member H, transcript variant X2;transcript_id=Cattle_Y_T01816;gene_id=Cattle_Y_G01070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884025.1-3
haplotype2-0000357	CAT	exon	57056157	57056241	.	-	.	ID=Cattle_Y_E04185;Parent=Cattle_Y_T01816;Dbxref=GeneID:100336572,GenBank:XM_059884025.1,VGNC:VGNC:50166;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=ARSH;product=arylsulfatase family member H, transcript variant X2;transcript_id=Cattle_Y_T01816;gene_id=Cattle_Y_G01070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884025.1-2
haplotype2-0000357	CAT	exon	57085837	57086572	.	-	.	ID=Cattle_Y_E04186;Parent=Cattle_Y_T01816;Dbxref=GeneID:100336572,GenBank:XM_059884025.1,VGNC:VGNC:50166;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=ARSH;product=arylsulfatase family member H, transcript variant X2;transcript_id=Cattle_Y_T01816;gene_id=Cattle_Y_G01070;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884025.1-1
haplotype2-0000357	CAT	CDS	57036206	57036573	.	-	2	ID=Cattle_Y_C03653;Parent=Cattle_Y_T01816;Dbxref=GeneID:100336572,GenBank:XP_059740008.1,VGNC:VGNC:50166;Name=XP_059740008.1;gbkey=CDS;gene=ARSH;product=arylsulfatase H;protein_id=XP_059740008.1;gene_id=Cattle_Y_G01070;transcript_id=Cattle_Y_T01816;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57038796	57038917	.	-	1	ID=Cattle_Y_C03654;Parent=Cattle_Y_T01816;Dbxref=GeneID:100336572,GenBank:XP_059740008.1,VGNC:VGNC:50166;Name=XP_059740008.1;gbkey=CDS;gene=ARSH;product=arylsulfatase H;protein_id=XP_059740008.1;gene_id=Cattle_Y_G01070;transcript_id=Cattle_Y_T01816;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57040701	57040863	.	-	2	ID=Cattle_Y_C03655;Parent=Cattle_Y_T01816;Dbxref=GeneID:100336572,GenBank:XP_059740008.1,VGNC:VGNC:50166;Name=XP_059740008.1;gbkey=CDS;gene=ARSH;product=arylsulfatase H;protein_id=XP_059740008.1;gene_id=Cattle_Y_G01070;transcript_id=Cattle_Y_T01816;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57042235	57042369	.	-	2	ID=Cattle_Y_C03656;Parent=Cattle_Y_T01816;Dbxref=GeneID:100336572,GenBank:XP_059740008.1,VGNC:VGNC:50166;Name=XP_059740008.1;gbkey=CDS;gene=ARSH;product=arylsulfatase H;protein_id=XP_059740008.1;gene_id=Cattle_Y_G01070;transcript_id=Cattle_Y_T01816;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57044330	57044466	.	-	1	ID=Cattle_Y_C03657;Parent=Cattle_Y_T01816;Dbxref=GeneID:100336572,GenBank:XP_059740008.1,VGNC:VGNC:50166;Name=XP_059740008.1;gbkey=CDS;gene=ARSH;product=arylsulfatase H;protein_id=XP_059740008.1;gene_id=Cattle_Y_G01070;transcript_id=Cattle_Y_T01816;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57045095	57045518	.	-	2	ID=Cattle_Y_C03658;Parent=Cattle_Y_T01816;Dbxref=GeneID:100336572,GenBank:XP_059740008.1,VGNC:VGNC:50166;Name=XP_059740008.1;gbkey=CDS;gene=ARSH;product=arylsulfatase H;protein_id=XP_059740008.1;gene_id=Cattle_Y_G01070;transcript_id=Cattle_Y_T01816;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57047139	57047264	.	-	2	ID=Cattle_Y_C03659;Parent=Cattle_Y_T01816;Dbxref=GeneID:100336572,GenBank:XP_059740008.1,VGNC:VGNC:50166;Name=XP_059740008.1;gbkey=CDS;gene=ARSH;product=arylsulfatase H;protein_id=XP_059740008.1;gene_id=Cattle_Y_G01070;transcript_id=Cattle_Y_T01816;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57048350	57048471	.	-	1	ID=Cattle_Y_C03660;Parent=Cattle_Y_T01816;Dbxref=GeneID:100336572,GenBank:XP_059740008.1,VGNC:VGNC:50166;Name=XP_059740008.1;gbkey=CDS;gene=ARSH;product=arylsulfatase H;protein_id=XP_059740008.1;gene_id=Cattle_Y_G01070;transcript_id=Cattle_Y_T01816;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57049157	57049306	.	-	1	ID=Cattle_Y_C03661;Parent=Cattle_Y_T01816;Dbxref=GeneID:100336572,GenBank:XP_059740008.1,VGNC:VGNC:50166;Name=XP_059740008.1;gbkey=CDS;gene=ARSH;product=arylsulfatase H;protein_id=XP_059740008.1;gene_id=Cattle_Y_G01070;transcript_id=Cattle_Y_T01816;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57052039	57052061	.	-	0	ID=Cattle_Y_C03662;Parent=Cattle_Y_T01816;Dbxref=GeneID:100336572,GenBank:XP_059740008.1,VGNC:VGNC:50166;Name=XP_059740008.1;gbkey=CDS;gene=ARSH;product=arylsulfatase H;protein_id=XP_059740008.1;gene_id=Cattle_Y_G01070;transcript_id=Cattle_Y_T01816;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	57061469	57082809	.	+	.	ID=Cattle_Y_G01071;Dbxref=BGD:BT13575,GeneID:505899,VGNC:VGNC:55097;Name=ARSL;description=arylsulfatase L;gbkey=Gene;gene=ARSL;gene_biotype=protein_coding;gene_synonym=ARSE;gene_id=Cattle_Y_G01071;source_id=gene-ARSL-2
haplotype2-0000357	CAT	mRNA	57068052	57082809	.	+	.	ID=Cattle_Y_T01817;Parent=Cattle_Y_G01071;Dbxref=GeneID:505899,GenBank:NM_001097988.1,BGD:BT13575,VGNC:VGNC:55097;Name=NM_001097988.1;Note=The RefSeq transcript has 7 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ARSL;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001097988.1;product=arylsulfatase L;transcript_id=Cattle_Y_T01817;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001097988.1-2
haplotype2-0000357	CAT	exon	57068052	57068198	.	+	.	ID=Cattle_Y_E04187;Parent=Cattle_Y_T01817;Dbxref=GeneID:505899,GenBank:NM_001097988.1,BGD:BT13575,VGNC:VGNC:55097;Note=The RefSeq transcript has 7 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ARSL;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001097988.1;product=arylsulfatase L;transcript_id=Cattle_Y_T01817;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001097988.1-2-1
haplotype2-0000357	CAT	exon	57069250	57069293	.	+	.	ID=Cattle_Y_E04188;Parent=Cattle_Y_T01817;Dbxref=GeneID:505899,GenBank:NM_001097988.1,BGD:BT13575,VGNC:VGNC:55097;Note=The RefSeq transcript has 7 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ARSL;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001097988.1;product=arylsulfatase L;transcript_id=Cattle_Y_T01817;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001097988.1-2-2
haplotype2-0000357	CAT	exon	57072179	57072328	.	+	.	ID=Cattle_Y_E04189;Parent=Cattle_Y_T01817;Dbxref=GeneID:505899,GenBank:NM_001097988.1,BGD:BT13575,VGNC:VGNC:55097;Note=The RefSeq transcript has 7 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ARSL;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001097988.1;product=arylsulfatase L;transcript_id=Cattle_Y_T01817;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001097988.1-2-3
haplotype2-0000357	CAT	exon	57073517	57073638	.	+	.	ID=Cattle_Y_E04190;Parent=Cattle_Y_T01817;Dbxref=GeneID:505899,GenBank:NM_001097988.1,BGD:BT13575,VGNC:VGNC:55097;Note=The RefSeq transcript has 7 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ARSL;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001097988.1;product=arylsulfatase L;transcript_id=Cattle_Y_T01817;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001097988.1-2-4
haplotype2-0000357	CAT	exon	57074736	57074858	.	+	.	ID=Cattle_Y_E04191;Parent=Cattle_Y_T01817;Dbxref=GeneID:505899,GenBank:NM_001097988.1,BGD:BT13575,VGNC:VGNC:55097;Note=The RefSeq transcript has 7 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ARSL;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001097988.1;product=arylsulfatase L;transcript_id=Cattle_Y_T01817;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001097988.1-2-5
haplotype2-0000357	CAT	exon	57076850	57077276	.	+	.	ID=Cattle_Y_E04192;Parent=Cattle_Y_T01817;Dbxref=GeneID:505899,GenBank:NM_001097988.1,BGD:BT13575,VGNC:VGNC:55097;Note=The RefSeq transcript has 7 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ARSL;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001097988.1;product=arylsulfatase L;transcript_id=Cattle_Y_T01817;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001097988.1-2-6
haplotype2-0000357	CAT	exon	57077873	57078009	.	+	.	ID=Cattle_Y_E04193;Parent=Cattle_Y_T01817;Dbxref=GeneID:505899,GenBank:NM_001097988.1,BGD:BT13575,VGNC:VGNC:55097;Note=The RefSeq transcript has 7 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ARSL;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001097988.1;product=arylsulfatase L;transcript_id=Cattle_Y_T01817;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001097988.1-2-7
haplotype2-0000357	CAT	exon	57078814	57078948	.	+	.	ID=Cattle_Y_E04194;Parent=Cattle_Y_T01817;Dbxref=GeneID:505899,GenBank:NM_001097988.1,BGD:BT13575,VGNC:VGNC:55097;Note=The RefSeq transcript has 7 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ARSL;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001097988.1;product=arylsulfatase L;transcript_id=Cattle_Y_T01817;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001097988.1-2-8
haplotype2-0000357	CAT	exon	57079409	57079571	.	+	.	ID=Cattle_Y_E04195;Parent=Cattle_Y_T01817;Dbxref=GeneID:505899,GenBank:NM_001097988.1,BGD:BT13575,VGNC:VGNC:55097;Note=The RefSeq transcript has 7 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ARSL;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001097988.1;product=arylsulfatase L;transcript_id=Cattle_Y_T01817;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001097988.1-2-9
haplotype2-0000357	CAT	exon	57081721	57081842	.	+	.	ID=Cattle_Y_E04196;Parent=Cattle_Y_T01817;Dbxref=GeneID:505899,GenBank:NM_001097988.1,BGD:BT13575,VGNC:VGNC:55097;Note=The RefSeq transcript has 7 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ARSL;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001097988.1;product=arylsulfatase L;transcript_id=Cattle_Y_T01817;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001097988.1-2-10
haplotype2-0000357	CAT	exon	57082393	57082809	.	+	.	ID=Cattle_Y_E04197;Parent=Cattle_Y_T01817;Dbxref=GeneID:505899,GenBank:NM_001097988.1,BGD:BT13575,VGNC:VGNC:55097;Note=The RefSeq transcript has 7 substitutions compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=ARSL;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001097988.1;product=arylsulfatase L;transcript_id=Cattle_Y_T01817;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001097988.1-2-11
haplotype2-0000357	CAT	CDS	57069271	57069293	.	+	0	ID=Cattle_Y_C03663;Parent=Cattle_Y_T01817;Dbxref=GeneID:505899,GenBank:NP_001091457.1,BGD:BT13575,VGNC:VGNC:55097;Name=NP_001091457.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L precursor;protein_id=NP_001091457.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01817;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57072179	57072328	.	+	1	ID=Cattle_Y_C03664;Parent=Cattle_Y_T01817;Dbxref=GeneID:505899,GenBank:NP_001091457.1,BGD:BT13575,VGNC:VGNC:55097;Name=NP_001091457.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L precursor;protein_id=NP_001091457.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01817;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57073517	57073638	.	+	1	ID=Cattle_Y_C03665;Parent=Cattle_Y_T01817;Dbxref=GeneID:505899,GenBank:NP_001091457.1,BGD:BT13575,VGNC:VGNC:55097;Name=NP_001091457.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L precursor;protein_id=NP_001091457.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01817;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57074736	57074858	.	+	2	ID=Cattle_Y_C03666;Parent=Cattle_Y_T01817;Dbxref=GeneID:505899,GenBank:NP_001091457.1,BGD:BT13575,VGNC:VGNC:55097;Name=NP_001091457.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L precursor;protein_id=NP_001091457.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01817;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57076850	57077276	.	+	2	ID=Cattle_Y_C03667;Parent=Cattle_Y_T01817;Dbxref=GeneID:505899,GenBank:NP_001091457.1,BGD:BT13575,VGNC:VGNC:55097;Name=NP_001091457.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L precursor;protein_id=NP_001091457.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01817;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57077873	57078009	.	+	1	ID=Cattle_Y_C03668;Parent=Cattle_Y_T01817;Dbxref=GeneID:505899,GenBank:NP_001091457.1,BGD:BT13575,VGNC:VGNC:55097;Name=NP_001091457.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L precursor;protein_id=NP_001091457.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01817;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57078814	57078948	.	+	2	ID=Cattle_Y_C03669;Parent=Cattle_Y_T01817;Dbxref=GeneID:505899,GenBank:NP_001091457.1,BGD:BT13575,VGNC:VGNC:55097;Name=NP_001091457.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L precursor;protein_id=NP_001091457.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01817;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57079409	57079571	.	+	2	ID=Cattle_Y_C03670;Parent=Cattle_Y_T01817;Dbxref=GeneID:505899,GenBank:NP_001091457.1,BGD:BT13575,VGNC:VGNC:55097;Name=NP_001091457.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L precursor;protein_id=NP_001091457.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01817;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57081721	57081842	.	+	1	ID=Cattle_Y_C03671;Parent=Cattle_Y_T01817;Dbxref=GeneID:505899,GenBank:NP_001091457.1,BGD:BT13575,VGNC:VGNC:55097;Name=NP_001091457.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L precursor;protein_id=NP_001091457.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01817;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57082393	57082742	.	+	2	ID=Cattle_Y_C03672;Parent=Cattle_Y_T01817;Dbxref=GeneID:505899,GenBank:NP_001091457.1,BGD:BT13575,VGNC:VGNC:55097;Name=NP_001091457.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L precursor;protein_id=NP_001091457.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01817;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57061472	57082806	.	+	.	ID=Cattle_Y_T01818;Parent=Cattle_Y_G01071;Dbxref=GeneID:505899,GenBank:XM_059883972.1,BGD:BT13575,VGNC:VGNC:55097;Name=XM_059883972.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;model_evidence=Supporting evidence includes similarity to: 15 ESTs%2C 22 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 10 samples with support for all annotated introns;product=arylsulfatase L%2C transcript variant X1;transcript_id=Cattle_Y_T01818;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883972.1
haplotype2-0000357	CAT	exon	57061472	57061642	.	+	.	ID=Cattle_Y_E04198;Parent=Cattle_Y_T01818;Dbxref=GeneID:505899,GenBank:XM_059883972.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X1;transcript_id=Cattle_Y_T01818;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883972.1-1
haplotype2-0000357	CAT	exon	57067018	57067103	.	+	.	ID=Cattle_Y_E04199;Parent=Cattle_Y_T01818;Dbxref=GeneID:505899,GenBank:XM_059883972.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X1;transcript_id=Cattle_Y_T01818;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883972.1-2
haplotype2-0000357	CAT	exon	57067855	57068198	.	+	.	ID=Cattle_Y_E04200;Parent=Cattle_Y_T01818;Dbxref=GeneID:505899,GenBank:XM_059883972.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X1;transcript_id=Cattle_Y_T01818;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883972.1-3
haplotype2-0000357	CAT	exon	57069250	57069293	.	+	.	ID=Cattle_Y_E04201;Parent=Cattle_Y_T01818;Dbxref=GeneID:505899,GenBank:XM_059883972.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X1;transcript_id=Cattle_Y_T01818;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883972.1-4
haplotype2-0000357	CAT	exon	57072179	57072328	.	+	.	ID=Cattle_Y_E04202;Parent=Cattle_Y_T01818;Dbxref=GeneID:505899,GenBank:XM_059883972.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X1;transcript_id=Cattle_Y_T01818;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883972.1-5
haplotype2-0000357	CAT	exon	57073517	57073638	.	+	.	ID=Cattle_Y_E04203;Parent=Cattle_Y_T01818;Dbxref=GeneID:505899,GenBank:XM_059883972.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X1;transcript_id=Cattle_Y_T01818;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883972.1-6
haplotype2-0000357	CAT	exon	57074736	57074858	.	+	.	ID=Cattle_Y_E04204;Parent=Cattle_Y_T01818;Dbxref=GeneID:505899,GenBank:XM_059883972.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X1;transcript_id=Cattle_Y_T01818;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883972.1-7
haplotype2-0000357	CAT	exon	57076850	57077276	.	+	.	ID=Cattle_Y_E04205;Parent=Cattle_Y_T01818;Dbxref=GeneID:505899,GenBank:XM_059883972.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X1;transcript_id=Cattle_Y_T01818;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883972.1-8
haplotype2-0000357	CAT	exon	57077873	57078009	.	+	.	ID=Cattle_Y_E04206;Parent=Cattle_Y_T01818;Dbxref=GeneID:505899,GenBank:XM_059883972.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X1;transcript_id=Cattle_Y_T01818;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883972.1-9
haplotype2-0000357	CAT	exon	57078814	57078948	.	+	.	ID=Cattle_Y_E04207;Parent=Cattle_Y_T01818;Dbxref=GeneID:505899,GenBank:XM_059883972.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X1;transcript_id=Cattle_Y_T01818;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883972.1-10
haplotype2-0000357	CAT	exon	57079409	57079571	.	+	.	ID=Cattle_Y_E04208;Parent=Cattle_Y_T01818;Dbxref=GeneID:505899,GenBank:XM_059883972.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X1;transcript_id=Cattle_Y_T01818;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883972.1-11
haplotype2-0000357	CAT	exon	57081721	57081842	.	+	.	ID=Cattle_Y_E04209;Parent=Cattle_Y_T01818;Dbxref=GeneID:505899,GenBank:XM_059883972.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X1;transcript_id=Cattle_Y_T01818;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883972.1-12
haplotype2-0000357	CAT	exon	57082384	57082806	.	+	.	ID=Cattle_Y_E04210;Parent=Cattle_Y_T01818;Dbxref=GeneID:505899,GenBank:XM_059883972.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X1;transcript_id=Cattle_Y_T01818;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883972.1-13
haplotype2-0000357	CAT	CDS	57069271	57069293	.	+	0	ID=Cattle_Y_C03673;Parent=Cattle_Y_T01818;Dbxref=GeneID:505899,GenBank:XP_059739955.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739955.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739955.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01818;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57072179	57072328	.	+	1	ID=Cattle_Y_C03674;Parent=Cattle_Y_T01818;Dbxref=GeneID:505899,GenBank:XP_059739955.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739955.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739955.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01818;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57073517	57073638	.	+	1	ID=Cattle_Y_C03675;Parent=Cattle_Y_T01818;Dbxref=GeneID:505899,GenBank:XP_059739955.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739955.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739955.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01818;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57074736	57074858	.	+	2	ID=Cattle_Y_C03676;Parent=Cattle_Y_T01818;Dbxref=GeneID:505899,GenBank:XP_059739955.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739955.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739955.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01818;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57076850	57077276	.	+	2	ID=Cattle_Y_C03677;Parent=Cattle_Y_T01818;Dbxref=GeneID:505899,GenBank:XP_059739955.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739955.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739955.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01818;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57077873	57078009	.	+	1	ID=Cattle_Y_C03678;Parent=Cattle_Y_T01818;Dbxref=GeneID:505899,GenBank:XP_059739955.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739955.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739955.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01818;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57078814	57078948	.	+	2	ID=Cattle_Y_C03679;Parent=Cattle_Y_T01818;Dbxref=GeneID:505899,GenBank:XP_059739955.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739955.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739955.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01818;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57079409	57079571	.	+	2	ID=Cattle_Y_C03680;Parent=Cattle_Y_T01818;Dbxref=GeneID:505899,GenBank:XP_059739955.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739955.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739955.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01818;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57081721	57081842	.	+	1	ID=Cattle_Y_C03681;Parent=Cattle_Y_T01818;Dbxref=GeneID:505899,GenBank:XP_059739955.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739955.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739955.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01818;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57082384	57082742	.	+	2	ID=Cattle_Y_C03682;Parent=Cattle_Y_T01818;Dbxref=GeneID:505899,GenBank:XP_059739955.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739955.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739955.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01818;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57061472	57082806	.	+	.	ID=Cattle_Y_T01819;Parent=Cattle_Y_G01071;Dbxref=GeneID:505899,GenBank:XM_059883973.1,BGD:BT13575,VGNC:VGNC:55097;Name=XM_059883973.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;model_evidence=Supporting evidence includes similarity to: 11 ESTs%2C 22 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 26 samples with support for all annotated introns;product=arylsulfatase L%2C transcript variant X2;transcript_id=Cattle_Y_T01819;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883973.1
haplotype2-0000357	CAT	exon	57061472	57061642	.	+	.	ID=Cattle_Y_E04211;Parent=Cattle_Y_T01819;Dbxref=GeneID:505899,GenBank:XM_059883973.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X2;transcript_id=Cattle_Y_T01819;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883973.1-1
haplotype2-0000357	CAT	exon	57067018	57067103	.	+	.	ID=Cattle_Y_E04212;Parent=Cattle_Y_T01819;Dbxref=GeneID:505899,GenBank:XM_059883973.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X2;transcript_id=Cattle_Y_T01819;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883973.1-2
haplotype2-0000357	CAT	exon	57069250	57069293	.	+	.	ID=Cattle_Y_E04213;Parent=Cattle_Y_T01819;Dbxref=GeneID:505899,GenBank:XM_059883973.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X2;transcript_id=Cattle_Y_T01819;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883973.1-3
haplotype2-0000357	CAT	exon	57072179	57072328	.	+	.	ID=Cattle_Y_E04214;Parent=Cattle_Y_T01819;Dbxref=GeneID:505899,GenBank:XM_059883973.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X2;transcript_id=Cattle_Y_T01819;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883973.1-4
haplotype2-0000357	CAT	exon	57073517	57073638	.	+	.	ID=Cattle_Y_E04215;Parent=Cattle_Y_T01819;Dbxref=GeneID:505899,GenBank:XM_059883973.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X2;transcript_id=Cattle_Y_T01819;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883973.1-5
haplotype2-0000357	CAT	exon	57074736	57074858	.	+	.	ID=Cattle_Y_E04216;Parent=Cattle_Y_T01819;Dbxref=GeneID:505899,GenBank:XM_059883973.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X2;transcript_id=Cattle_Y_T01819;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883973.1-6
haplotype2-0000357	CAT	exon	57076850	57077276	.	+	.	ID=Cattle_Y_E04217;Parent=Cattle_Y_T01819;Dbxref=GeneID:505899,GenBank:XM_059883973.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X2;transcript_id=Cattle_Y_T01819;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883973.1-7
haplotype2-0000357	CAT	exon	57077873	57078009	.	+	.	ID=Cattle_Y_E04218;Parent=Cattle_Y_T01819;Dbxref=GeneID:505899,GenBank:XM_059883973.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X2;transcript_id=Cattle_Y_T01819;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883973.1-8
haplotype2-0000357	CAT	exon	57078814	57078948	.	+	.	ID=Cattle_Y_E04219;Parent=Cattle_Y_T01819;Dbxref=GeneID:505899,GenBank:XM_059883973.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X2;transcript_id=Cattle_Y_T01819;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883973.1-9
haplotype2-0000357	CAT	exon	57079409	57079571	.	+	.	ID=Cattle_Y_E04220;Parent=Cattle_Y_T01819;Dbxref=GeneID:505899,GenBank:XM_059883973.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X2;transcript_id=Cattle_Y_T01819;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883973.1-10
haplotype2-0000357	CAT	exon	57081721	57081842	.	+	.	ID=Cattle_Y_E04221;Parent=Cattle_Y_T01819;Dbxref=GeneID:505899,GenBank:XM_059883973.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X2;transcript_id=Cattle_Y_T01819;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883973.1-11
haplotype2-0000357	CAT	exon	57082384	57082806	.	+	.	ID=Cattle_Y_E04222;Parent=Cattle_Y_T01819;Dbxref=GeneID:505899,GenBank:XM_059883973.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X2;transcript_id=Cattle_Y_T01819;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883973.1-12
haplotype2-0000357	CAT	CDS	57069271	57069293	.	+	0	ID=Cattle_Y_C03683;Parent=Cattle_Y_T01819;Dbxref=GeneID:505899,GenBank:XP_059739956.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739956.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739956.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01819;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57072179	57072328	.	+	1	ID=Cattle_Y_C03684;Parent=Cattle_Y_T01819;Dbxref=GeneID:505899,GenBank:XP_059739956.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739956.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739956.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01819;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57073517	57073638	.	+	1	ID=Cattle_Y_C03685;Parent=Cattle_Y_T01819;Dbxref=GeneID:505899,GenBank:XP_059739956.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739956.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739956.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01819;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57074736	57074858	.	+	2	ID=Cattle_Y_C03686;Parent=Cattle_Y_T01819;Dbxref=GeneID:505899,GenBank:XP_059739956.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739956.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739956.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01819;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57076850	57077276	.	+	2	ID=Cattle_Y_C03687;Parent=Cattle_Y_T01819;Dbxref=GeneID:505899,GenBank:XP_059739956.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739956.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739956.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01819;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57077873	57078009	.	+	1	ID=Cattle_Y_C03688;Parent=Cattle_Y_T01819;Dbxref=GeneID:505899,GenBank:XP_059739956.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739956.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739956.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01819;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57078814	57078948	.	+	2	ID=Cattle_Y_C03689;Parent=Cattle_Y_T01819;Dbxref=GeneID:505899,GenBank:XP_059739956.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739956.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739956.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01819;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57079409	57079571	.	+	2	ID=Cattle_Y_C03690;Parent=Cattle_Y_T01819;Dbxref=GeneID:505899,GenBank:XP_059739956.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739956.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739956.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01819;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57081721	57081842	.	+	1	ID=Cattle_Y_C03691;Parent=Cattle_Y_T01819;Dbxref=GeneID:505899,GenBank:XP_059739956.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739956.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739956.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01819;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57082384	57082742	.	+	2	ID=Cattle_Y_C03692;Parent=Cattle_Y_T01819;Dbxref=GeneID:505899,GenBank:XP_059739956.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739956.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739956.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01819;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57061472	57082806	.	+	.	ID=Cattle_Y_T01820;Parent=Cattle_Y_G01071;Dbxref=GeneID:505899,GenBank:XM_059883974.1,BGD:BT13575,VGNC:VGNC:55097;Name=XM_059883974.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;model_evidence=Supporting evidence includes similarity to: 10 ESTs%2C 22 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 32 samples with support for all annotated introns;product=arylsulfatase L%2C transcript variant X3;transcript_id=Cattle_Y_T01820;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883974.1
haplotype2-0000357	CAT	exon	57061472	57061642	.	+	.	ID=Cattle_Y_E04223;Parent=Cattle_Y_T01820;Dbxref=GeneID:505899,GenBank:XM_059883974.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X3;transcript_id=Cattle_Y_T01820;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883974.1-1
haplotype2-0000357	CAT	exon	57069250	57069293	.	+	.	ID=Cattle_Y_E04224;Parent=Cattle_Y_T01820;Dbxref=GeneID:505899,GenBank:XM_059883974.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X3;transcript_id=Cattle_Y_T01820;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883974.1-2
haplotype2-0000357	CAT	exon	57072179	57072328	.	+	.	ID=Cattle_Y_E04225;Parent=Cattle_Y_T01820;Dbxref=GeneID:505899,GenBank:XM_059883974.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X3;transcript_id=Cattle_Y_T01820;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883974.1-3
haplotype2-0000357	CAT	exon	57073517	57073638	.	+	.	ID=Cattle_Y_E04226;Parent=Cattle_Y_T01820;Dbxref=GeneID:505899,GenBank:XM_059883974.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X3;transcript_id=Cattle_Y_T01820;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883974.1-4
haplotype2-0000357	CAT	exon	57074736	57074858	.	+	.	ID=Cattle_Y_E04227;Parent=Cattle_Y_T01820;Dbxref=GeneID:505899,GenBank:XM_059883974.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X3;transcript_id=Cattle_Y_T01820;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883974.1-5
haplotype2-0000357	CAT	exon	57076850	57077276	.	+	.	ID=Cattle_Y_E04228;Parent=Cattle_Y_T01820;Dbxref=GeneID:505899,GenBank:XM_059883974.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X3;transcript_id=Cattle_Y_T01820;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883974.1-6
haplotype2-0000357	CAT	exon	57077873	57078009	.	+	.	ID=Cattle_Y_E04229;Parent=Cattle_Y_T01820;Dbxref=GeneID:505899,GenBank:XM_059883974.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X3;transcript_id=Cattle_Y_T01820;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883974.1-7
haplotype2-0000357	CAT	exon	57078814	57078948	.	+	.	ID=Cattle_Y_E04230;Parent=Cattle_Y_T01820;Dbxref=GeneID:505899,GenBank:XM_059883974.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X3;transcript_id=Cattle_Y_T01820;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883974.1-8
haplotype2-0000357	CAT	exon	57079409	57079571	.	+	.	ID=Cattle_Y_E04231;Parent=Cattle_Y_T01820;Dbxref=GeneID:505899,GenBank:XM_059883974.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X3;transcript_id=Cattle_Y_T01820;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883974.1-9
haplotype2-0000357	CAT	exon	57081721	57081842	.	+	.	ID=Cattle_Y_E04232;Parent=Cattle_Y_T01820;Dbxref=GeneID:505899,GenBank:XM_059883974.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X3;transcript_id=Cattle_Y_T01820;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883974.1-10
haplotype2-0000357	CAT	exon	57082384	57082806	.	+	.	ID=Cattle_Y_E04233;Parent=Cattle_Y_T01820;Dbxref=GeneID:505899,GenBank:XM_059883974.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X3;transcript_id=Cattle_Y_T01820;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883974.1-11
haplotype2-0000357	CAT	CDS	57069271	57069293	.	+	0	ID=Cattle_Y_C03693;Parent=Cattle_Y_T01820;Dbxref=GeneID:505899,GenBank:XP_059739957.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739957.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739957.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01820;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57072179	57072328	.	+	1	ID=Cattle_Y_C03694;Parent=Cattle_Y_T01820;Dbxref=GeneID:505899,GenBank:XP_059739957.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739957.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739957.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01820;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57073517	57073638	.	+	1	ID=Cattle_Y_C03695;Parent=Cattle_Y_T01820;Dbxref=GeneID:505899,GenBank:XP_059739957.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739957.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739957.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01820;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57074736	57074858	.	+	2	ID=Cattle_Y_C03696;Parent=Cattle_Y_T01820;Dbxref=GeneID:505899,GenBank:XP_059739957.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739957.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739957.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01820;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57076850	57077276	.	+	2	ID=Cattle_Y_C03697;Parent=Cattle_Y_T01820;Dbxref=GeneID:505899,GenBank:XP_059739957.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739957.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739957.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01820;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57077873	57078009	.	+	1	ID=Cattle_Y_C03698;Parent=Cattle_Y_T01820;Dbxref=GeneID:505899,GenBank:XP_059739957.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739957.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739957.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01820;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57078814	57078948	.	+	2	ID=Cattle_Y_C03699;Parent=Cattle_Y_T01820;Dbxref=GeneID:505899,GenBank:XP_059739957.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739957.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739957.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01820;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57079409	57079571	.	+	2	ID=Cattle_Y_C03700;Parent=Cattle_Y_T01820;Dbxref=GeneID:505899,GenBank:XP_059739957.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739957.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739957.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01820;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57081721	57081842	.	+	1	ID=Cattle_Y_C03701;Parent=Cattle_Y_T01820;Dbxref=GeneID:505899,GenBank:XP_059739957.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739957.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739957.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01820;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57082384	57082742	.	+	2	ID=Cattle_Y_C03702;Parent=Cattle_Y_T01820;Dbxref=GeneID:505899,GenBank:XP_059739957.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739957.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739957.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01820;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57061471	57082806	.	+	.	ID=Cattle_Y_T01821;Parent=Cattle_Y_G01071;Dbxref=GeneID:505899,GenBank:XM_059883975.1,BGD:BT13575,VGNC:VGNC:55097;Name=XM_059883975.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;model_evidence=Supporting evidence includes similarity to: 10 ESTs%2C 22 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=arylsulfatase L%2C transcript variant X4;transcript_id=Cattle_Y_T01821;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883975.1
haplotype2-0000357	CAT	exon	57061471	57061642	.	+	.	ID=Cattle_Y_E04234;Parent=Cattle_Y_T01821;Dbxref=GeneID:505899,GenBank:XM_059883975.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X4;transcript_id=Cattle_Y_T01821;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883975.1-1
haplotype2-0000357	CAT	exon	57067018	57067109	.	+	.	ID=Cattle_Y_E04235;Parent=Cattle_Y_T01821;Dbxref=GeneID:505899,GenBank:XM_059883975.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X4;transcript_id=Cattle_Y_T01821;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883975.1-2
haplotype2-0000357	CAT	exon	57069250	57069293	.	+	.	ID=Cattle_Y_E04236;Parent=Cattle_Y_T01821;Dbxref=GeneID:505899,GenBank:XM_059883975.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X4;transcript_id=Cattle_Y_T01821;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883975.1-3
haplotype2-0000357	CAT	exon	57072179	57072328	.	+	.	ID=Cattle_Y_E04237;Parent=Cattle_Y_T01821;Dbxref=GeneID:505899,GenBank:XM_059883975.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X4;transcript_id=Cattle_Y_T01821;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883975.1-4
haplotype2-0000357	CAT	exon	57073517	57073638	.	+	.	ID=Cattle_Y_E04238;Parent=Cattle_Y_T01821;Dbxref=GeneID:505899,GenBank:XM_059883975.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X4;transcript_id=Cattle_Y_T01821;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883975.1-5
haplotype2-0000357	CAT	exon	57074736	57074858	.	+	.	ID=Cattle_Y_E04239;Parent=Cattle_Y_T01821;Dbxref=GeneID:505899,GenBank:XM_059883975.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X4;transcript_id=Cattle_Y_T01821;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883975.1-6
haplotype2-0000357	CAT	exon	57076850	57077276	.	+	.	ID=Cattle_Y_E04240;Parent=Cattle_Y_T01821;Dbxref=GeneID:505899,GenBank:XM_059883975.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X4;transcript_id=Cattle_Y_T01821;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883975.1-7
haplotype2-0000357	CAT	exon	57077873	57078009	.	+	.	ID=Cattle_Y_E04241;Parent=Cattle_Y_T01821;Dbxref=GeneID:505899,GenBank:XM_059883975.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X4;transcript_id=Cattle_Y_T01821;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883975.1-8
haplotype2-0000357	CAT	exon	57078814	57078948	.	+	.	ID=Cattle_Y_E04242;Parent=Cattle_Y_T01821;Dbxref=GeneID:505899,GenBank:XM_059883975.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X4;transcript_id=Cattle_Y_T01821;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883975.1-9
haplotype2-0000357	CAT	exon	57079409	57079571	.	+	.	ID=Cattle_Y_E04243;Parent=Cattle_Y_T01821;Dbxref=GeneID:505899,GenBank:XM_059883975.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X4;transcript_id=Cattle_Y_T01821;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883975.1-10
haplotype2-0000357	CAT	exon	57081721	57081842	.	+	.	ID=Cattle_Y_E04244;Parent=Cattle_Y_T01821;Dbxref=GeneID:505899,GenBank:XM_059883975.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X4;transcript_id=Cattle_Y_T01821;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883975.1-11
haplotype2-0000357	CAT	exon	57082384	57082806	.	+	.	ID=Cattle_Y_E04245;Parent=Cattle_Y_T01821;Dbxref=GeneID:505899,GenBank:XM_059883975.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X4;transcript_id=Cattle_Y_T01821;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883975.1-12
haplotype2-0000357	CAT	CDS	57069271	57069293	.	+	0	ID=Cattle_Y_C03703;Parent=Cattle_Y_T01821;Dbxref=GeneID:505899,GenBank:XP_059739958.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739958.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739958.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01821;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57072179	57072328	.	+	1	ID=Cattle_Y_C03704;Parent=Cattle_Y_T01821;Dbxref=GeneID:505899,GenBank:XP_059739958.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739958.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739958.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01821;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57073517	57073638	.	+	1	ID=Cattle_Y_C03705;Parent=Cattle_Y_T01821;Dbxref=GeneID:505899,GenBank:XP_059739958.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739958.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739958.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01821;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57074736	57074858	.	+	2	ID=Cattle_Y_C03706;Parent=Cattle_Y_T01821;Dbxref=GeneID:505899,GenBank:XP_059739958.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739958.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739958.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01821;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57076850	57077276	.	+	2	ID=Cattle_Y_C03707;Parent=Cattle_Y_T01821;Dbxref=GeneID:505899,GenBank:XP_059739958.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739958.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739958.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01821;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57077873	57078009	.	+	1	ID=Cattle_Y_C03708;Parent=Cattle_Y_T01821;Dbxref=GeneID:505899,GenBank:XP_059739958.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739958.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739958.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01821;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57078814	57078948	.	+	2	ID=Cattle_Y_C03709;Parent=Cattle_Y_T01821;Dbxref=GeneID:505899,GenBank:XP_059739958.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739958.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739958.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01821;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57079409	57079571	.	+	2	ID=Cattle_Y_C03710;Parent=Cattle_Y_T01821;Dbxref=GeneID:505899,GenBank:XP_059739958.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739958.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739958.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01821;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57081721	57081842	.	+	1	ID=Cattle_Y_C03711;Parent=Cattle_Y_T01821;Dbxref=GeneID:505899,GenBank:XP_059739958.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739958.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739958.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01821;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57082384	57082742	.	+	2	ID=Cattle_Y_C03712;Parent=Cattle_Y_T01821;Dbxref=GeneID:505899,GenBank:XP_059739958.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739958.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739958.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01821;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57067150	57082806	.	+	.	ID=Cattle_Y_T01822;Parent=Cattle_Y_G01071;Dbxref=GeneID:505899,GenBank:XM_059883976.1,BGD:BT13575,VGNC:VGNC:55097;Name=XM_059883976.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;model_evidence=Supporting evidence includes similarity to: 16 ESTs%2C 22 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 22 samples with support for all annotated introns;product=arylsulfatase L%2C transcript variant X5;transcript_id=Cattle_Y_T01822;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883976.1
haplotype2-0000357	CAT	exon	57067150	57068198	.	+	.	ID=Cattle_Y_E04246;Parent=Cattle_Y_T01822;Dbxref=GeneID:505899,GenBank:XM_059883976.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X5;transcript_id=Cattle_Y_T01822;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883976.1-1
haplotype2-0000357	CAT	exon	57069250	57069293	.	+	.	ID=Cattle_Y_E04247;Parent=Cattle_Y_T01822;Dbxref=GeneID:505899,GenBank:XM_059883976.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X5;transcript_id=Cattle_Y_T01822;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883976.1-2
haplotype2-0000357	CAT	exon	57072179	57072328	.	+	.	ID=Cattle_Y_E04248;Parent=Cattle_Y_T01822;Dbxref=GeneID:505899,GenBank:XM_059883976.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X5;transcript_id=Cattle_Y_T01822;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883976.1-3
haplotype2-0000357	CAT	exon	57073517	57073638	.	+	.	ID=Cattle_Y_E04249;Parent=Cattle_Y_T01822;Dbxref=GeneID:505899,GenBank:XM_059883976.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X5;transcript_id=Cattle_Y_T01822;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883976.1-4
haplotype2-0000357	CAT	exon	57074736	57074858	.	+	.	ID=Cattle_Y_E04250;Parent=Cattle_Y_T01822;Dbxref=GeneID:505899,GenBank:XM_059883976.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X5;transcript_id=Cattle_Y_T01822;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883976.1-5
haplotype2-0000357	CAT	exon	57076850	57077276	.	+	.	ID=Cattle_Y_E04251;Parent=Cattle_Y_T01822;Dbxref=GeneID:505899,GenBank:XM_059883976.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X5;transcript_id=Cattle_Y_T01822;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883976.1-6
haplotype2-0000357	CAT	exon	57077873	57078009	.	+	.	ID=Cattle_Y_E04252;Parent=Cattle_Y_T01822;Dbxref=GeneID:505899,GenBank:XM_059883976.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X5;transcript_id=Cattle_Y_T01822;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883976.1-7
haplotype2-0000357	CAT	exon	57078814	57078948	.	+	.	ID=Cattle_Y_E04253;Parent=Cattle_Y_T01822;Dbxref=GeneID:505899,GenBank:XM_059883976.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X5;transcript_id=Cattle_Y_T01822;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883976.1-8
haplotype2-0000357	CAT	exon	57079409	57079571	.	+	.	ID=Cattle_Y_E04254;Parent=Cattle_Y_T01822;Dbxref=GeneID:505899,GenBank:XM_059883976.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X5;transcript_id=Cattle_Y_T01822;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883976.1-9
haplotype2-0000357	CAT	exon	57081721	57081842	.	+	.	ID=Cattle_Y_E04255;Parent=Cattle_Y_T01822;Dbxref=GeneID:505899,GenBank:XM_059883976.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X5;transcript_id=Cattle_Y_T01822;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883976.1-10
haplotype2-0000357	CAT	exon	57082384	57082806	.	+	.	ID=Cattle_Y_E04256;Parent=Cattle_Y_T01822;Dbxref=GeneID:505899,GenBank:XM_059883976.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X5;transcript_id=Cattle_Y_T01822;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883976.1-11
haplotype2-0000357	CAT	CDS	57069271	57069293	.	+	0	ID=Cattle_Y_C03713;Parent=Cattle_Y_T01822;Dbxref=GeneID:505899,GenBank:XP_059739959.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739959.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739959.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01822;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57072179	57072328	.	+	1	ID=Cattle_Y_C03714;Parent=Cattle_Y_T01822;Dbxref=GeneID:505899,GenBank:XP_059739959.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739959.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739959.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01822;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57073517	57073638	.	+	1	ID=Cattle_Y_C03715;Parent=Cattle_Y_T01822;Dbxref=GeneID:505899,GenBank:XP_059739959.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739959.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739959.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01822;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57074736	57074858	.	+	2	ID=Cattle_Y_C03716;Parent=Cattle_Y_T01822;Dbxref=GeneID:505899,GenBank:XP_059739959.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739959.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739959.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01822;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57076850	57077276	.	+	2	ID=Cattle_Y_C03717;Parent=Cattle_Y_T01822;Dbxref=GeneID:505899,GenBank:XP_059739959.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739959.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739959.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01822;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57077873	57078009	.	+	1	ID=Cattle_Y_C03718;Parent=Cattle_Y_T01822;Dbxref=GeneID:505899,GenBank:XP_059739959.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739959.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739959.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01822;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57078814	57078948	.	+	2	ID=Cattle_Y_C03719;Parent=Cattle_Y_T01822;Dbxref=GeneID:505899,GenBank:XP_059739959.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739959.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739959.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01822;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57079409	57079571	.	+	2	ID=Cattle_Y_C03720;Parent=Cattle_Y_T01822;Dbxref=GeneID:505899,GenBank:XP_059739959.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739959.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739959.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01822;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57081721	57081842	.	+	1	ID=Cattle_Y_C03721;Parent=Cattle_Y_T01822;Dbxref=GeneID:505899,GenBank:XP_059739959.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739959.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739959.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01822;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57082384	57082742	.	+	2	ID=Cattle_Y_C03722;Parent=Cattle_Y_T01822;Dbxref=GeneID:505899,GenBank:XP_059739959.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739959.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X1;protein_id=XP_059739959.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01822;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57061471	57082806	.	+	.	ID=Cattle_Y_T01823;Parent=Cattle_Y_G01071;Dbxref=GeneID:505899,GenBank:XM_059883977.1,BGD:BT13575,VGNC:VGNC:55097;Name=XM_059883977.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;model_evidence=Supporting evidence includes similarity to: 3 mRNAs%2C 10 ESTs%2C 6 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 5 samples with support for all annotated introns;product=arylsulfatase L%2C transcript variant X6;transcript_id=Cattle_Y_T01823;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883977.1
haplotype2-0000357	CAT	exon	57061471	57061642	.	+	.	ID=Cattle_Y_E04257;Parent=Cattle_Y_T01823;Dbxref=GeneID:505899,GenBank:XM_059883977.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X6;transcript_id=Cattle_Y_T01823;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883977.1-1
haplotype2-0000357	CAT	exon	57067018	57067103	.	+	.	ID=Cattle_Y_E04258;Parent=Cattle_Y_T01823;Dbxref=GeneID:505899,GenBank:XM_059883977.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X6;transcript_id=Cattle_Y_T01823;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883977.1-2
haplotype2-0000357	CAT	exon	57067855	57068198	.	+	.	ID=Cattle_Y_E04259;Parent=Cattle_Y_T01823;Dbxref=GeneID:505899,GenBank:XM_059883977.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X6;transcript_id=Cattle_Y_T01823;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883977.1-3
haplotype2-0000357	CAT	exon	57069250	57069293	.	+	.	ID=Cattle_Y_E04260;Parent=Cattle_Y_T01823;Dbxref=GeneID:505899,GenBank:XM_059883977.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X6;transcript_id=Cattle_Y_T01823;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883977.1-4
haplotype2-0000357	CAT	exon	57072179	57072328	.	+	.	ID=Cattle_Y_E04261;Parent=Cattle_Y_T01823;Dbxref=GeneID:505899,GenBank:XM_059883977.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X6;transcript_id=Cattle_Y_T01823;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883977.1-5
haplotype2-0000357	CAT	exon	57073517	57073638	.	+	.	ID=Cattle_Y_E04262;Parent=Cattle_Y_T01823;Dbxref=GeneID:505899,GenBank:XM_059883977.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X6;transcript_id=Cattle_Y_T01823;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883977.1-6
haplotype2-0000357	CAT	exon	57074736	57074858	.	+	.	ID=Cattle_Y_E04263;Parent=Cattle_Y_T01823;Dbxref=GeneID:505899,GenBank:XM_059883977.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X6;transcript_id=Cattle_Y_T01823;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883977.1-7
haplotype2-0000357	CAT	exon	57076850	57077276	.	+	.	ID=Cattle_Y_E04264;Parent=Cattle_Y_T01823;Dbxref=GeneID:505899,GenBank:XM_059883977.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X6;transcript_id=Cattle_Y_T01823;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883977.1-8
haplotype2-0000357	CAT	exon	57077873	57078009	.	+	.	ID=Cattle_Y_E04265;Parent=Cattle_Y_T01823;Dbxref=GeneID:505899,GenBank:XM_059883977.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X6;transcript_id=Cattle_Y_T01823;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883977.1-9
haplotype2-0000357	CAT	exon	57078814	57078948	.	+	.	ID=Cattle_Y_E04266;Parent=Cattle_Y_T01823;Dbxref=GeneID:505899,GenBank:XM_059883977.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X6;transcript_id=Cattle_Y_T01823;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883977.1-10
haplotype2-0000357	CAT	exon	57079409	57079571	.	+	.	ID=Cattle_Y_E04267;Parent=Cattle_Y_T01823;Dbxref=GeneID:505899,GenBank:XM_059883977.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X6;transcript_id=Cattle_Y_T01823;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883977.1-11
haplotype2-0000357	CAT	exon	57081721	57081842	.	+	.	ID=Cattle_Y_E04268;Parent=Cattle_Y_T01823;Dbxref=GeneID:505899,GenBank:XM_059883977.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X6;transcript_id=Cattle_Y_T01823;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883977.1-12
haplotype2-0000357	CAT	exon	57082393	57082806	.	+	.	ID=Cattle_Y_E04269;Parent=Cattle_Y_T01823;Dbxref=GeneID:505899,GenBank:XM_059883977.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X6;transcript_id=Cattle_Y_T01823;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883977.1-13
haplotype2-0000357	CAT	CDS	57069271	57069293	.	+	0	ID=Cattle_Y_C03723;Parent=Cattle_Y_T01823;Dbxref=GeneID:505899,GenBank:XP_059739960.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739960.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X2;protein_id=XP_059739960.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01823;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57072179	57072328	.	+	1	ID=Cattle_Y_C03724;Parent=Cattle_Y_T01823;Dbxref=GeneID:505899,GenBank:XP_059739960.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739960.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X2;protein_id=XP_059739960.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01823;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57073517	57073638	.	+	1	ID=Cattle_Y_C03725;Parent=Cattle_Y_T01823;Dbxref=GeneID:505899,GenBank:XP_059739960.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739960.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X2;protein_id=XP_059739960.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01823;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57074736	57074858	.	+	2	ID=Cattle_Y_C03726;Parent=Cattle_Y_T01823;Dbxref=GeneID:505899,GenBank:XP_059739960.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739960.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X2;protein_id=XP_059739960.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01823;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57076850	57077276	.	+	2	ID=Cattle_Y_C03727;Parent=Cattle_Y_T01823;Dbxref=GeneID:505899,GenBank:XP_059739960.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739960.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X2;protein_id=XP_059739960.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01823;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57077873	57078009	.	+	1	ID=Cattle_Y_C03728;Parent=Cattle_Y_T01823;Dbxref=GeneID:505899,GenBank:XP_059739960.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739960.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X2;protein_id=XP_059739960.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01823;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57078814	57078948	.	+	2	ID=Cattle_Y_C03729;Parent=Cattle_Y_T01823;Dbxref=GeneID:505899,GenBank:XP_059739960.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739960.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X2;protein_id=XP_059739960.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01823;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57079409	57079571	.	+	2	ID=Cattle_Y_C03730;Parent=Cattle_Y_T01823;Dbxref=GeneID:505899,GenBank:XP_059739960.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739960.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X2;protein_id=XP_059739960.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01823;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57081721	57081842	.	+	1	ID=Cattle_Y_C03731;Parent=Cattle_Y_T01823;Dbxref=GeneID:505899,GenBank:XP_059739960.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739960.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X2;protein_id=XP_059739960.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01823;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57082393	57082742	.	+	2	ID=Cattle_Y_C03732;Parent=Cattle_Y_T01823;Dbxref=GeneID:505899,GenBank:XP_059739960.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739960.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X2;protein_id=XP_059739960.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01823;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57061469	57082806	.	+	.	ID=Cattle_Y_T01824;Parent=Cattle_Y_G01071;Dbxref=GeneID:505899,GenBank:XM_059883978.1,BGD:BT13575,VGNC:VGNC:55097;Name=XM_059883978.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;model_evidence=Supporting evidence includes similarity to: 11 ESTs%2C 2 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=arylsulfatase L%2C transcript variant X7;transcript_id=Cattle_Y_T01824;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883978.1
haplotype2-0000357	CAT	exon	57061469	57061642	.	+	.	ID=Cattle_Y_E04270;Parent=Cattle_Y_T01824;Dbxref=GeneID:505899,GenBank:XM_059883978.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X7;transcript_id=Cattle_Y_T01824;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883978.1-1
haplotype2-0000357	CAT	exon	57067018	57067103	.	+	.	ID=Cattle_Y_E04271;Parent=Cattle_Y_T01824;Dbxref=GeneID:505899,GenBank:XM_059883978.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X7;transcript_id=Cattle_Y_T01824;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883978.1-2
haplotype2-0000357	CAT	exon	57067855	57068198	.	+	.	ID=Cattle_Y_E04272;Parent=Cattle_Y_T01824;Dbxref=GeneID:505899,GenBank:XM_059883978.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X7;transcript_id=Cattle_Y_T01824;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883978.1-3
haplotype2-0000357	CAT	exon	57069250	57069293	.	+	.	ID=Cattle_Y_E04273;Parent=Cattle_Y_T01824;Dbxref=GeneID:505899,GenBank:XM_059883978.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X7;transcript_id=Cattle_Y_T01824;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883978.1-4
haplotype2-0000357	CAT	exon	57072179	57072328	.	+	.	ID=Cattle_Y_E04274;Parent=Cattle_Y_T01824;Dbxref=GeneID:505899,GenBank:XM_059883978.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X7;transcript_id=Cattle_Y_T01824;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883978.1-5
haplotype2-0000357	CAT	exon	57073517	57073638	.	+	.	ID=Cattle_Y_E04275;Parent=Cattle_Y_T01824;Dbxref=GeneID:505899,GenBank:XM_059883978.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X7;transcript_id=Cattle_Y_T01824;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883978.1-6
haplotype2-0000357	CAT	exon	57076850	57077276	.	+	.	ID=Cattle_Y_E04276;Parent=Cattle_Y_T01824;Dbxref=GeneID:505899,GenBank:XM_059883978.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X7;transcript_id=Cattle_Y_T01824;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883978.1-7
haplotype2-0000357	CAT	exon	57077873	57078009	.	+	.	ID=Cattle_Y_E04277;Parent=Cattle_Y_T01824;Dbxref=GeneID:505899,GenBank:XM_059883978.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X7;transcript_id=Cattle_Y_T01824;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883978.1-8
haplotype2-0000357	CAT	exon	57078814	57078948	.	+	.	ID=Cattle_Y_E04278;Parent=Cattle_Y_T01824;Dbxref=GeneID:505899,GenBank:XM_059883978.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X7;transcript_id=Cattle_Y_T01824;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883978.1-9
haplotype2-0000357	CAT	exon	57079409	57079571	.	+	.	ID=Cattle_Y_E04279;Parent=Cattle_Y_T01824;Dbxref=GeneID:505899,GenBank:XM_059883978.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X7;transcript_id=Cattle_Y_T01824;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883978.1-10
haplotype2-0000357	CAT	exon	57081721	57081842	.	+	.	ID=Cattle_Y_E04280;Parent=Cattle_Y_T01824;Dbxref=GeneID:505899,GenBank:XM_059883978.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X7;transcript_id=Cattle_Y_T01824;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883978.1-11
haplotype2-0000357	CAT	exon	57082384	57082806	.	+	.	ID=Cattle_Y_E04281;Parent=Cattle_Y_T01824;Dbxref=GeneID:505899,GenBank:XM_059883978.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X7;transcript_id=Cattle_Y_T01824;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883978.1-12
haplotype2-0000357	CAT	CDS	57069271	57069293	.	+	0	ID=Cattle_Y_C03733;Parent=Cattle_Y_T01824;Dbxref=GeneID:505899,GenBank:XP_059739961.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739961.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X3;protein_id=XP_059739961.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01824;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57072179	57072328	.	+	1	ID=Cattle_Y_C03734;Parent=Cattle_Y_T01824;Dbxref=GeneID:505899,GenBank:XP_059739961.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739961.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X3;protein_id=XP_059739961.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01824;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57073517	57073638	.	+	1	ID=Cattle_Y_C03735;Parent=Cattle_Y_T01824;Dbxref=GeneID:505899,GenBank:XP_059739961.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739961.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X3;protein_id=XP_059739961.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01824;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57076850	57077276	.	+	2	ID=Cattle_Y_C03736;Parent=Cattle_Y_T01824;Dbxref=GeneID:505899,GenBank:XP_059739961.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739961.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X3;protein_id=XP_059739961.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01824;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57077873	57078009	.	+	1	ID=Cattle_Y_C03737;Parent=Cattle_Y_T01824;Dbxref=GeneID:505899,GenBank:XP_059739961.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739961.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X3;protein_id=XP_059739961.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01824;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57078814	57078948	.	+	2	ID=Cattle_Y_C03738;Parent=Cattle_Y_T01824;Dbxref=GeneID:505899,GenBank:XP_059739961.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739961.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X3;protein_id=XP_059739961.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01824;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57079409	57079571	.	+	2	ID=Cattle_Y_C03739;Parent=Cattle_Y_T01824;Dbxref=GeneID:505899,GenBank:XP_059739961.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739961.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X3;protein_id=XP_059739961.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01824;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57081721	57081842	.	+	1	ID=Cattle_Y_C03740;Parent=Cattle_Y_T01824;Dbxref=GeneID:505899,GenBank:XP_059739961.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739961.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X3;protein_id=XP_059739961.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01824;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57082384	57082742	.	+	2	ID=Cattle_Y_C03741;Parent=Cattle_Y_T01824;Dbxref=GeneID:505899,GenBank:XP_059739961.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739961.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X3;protein_id=XP_059739961.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01824;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57061471	57082806	.	+	.	ID=Cattle_Y_T01825;Parent=Cattle_Y_G01071;Dbxref=GeneID:505899,GenBank:XM_059883979.1,BGD:BT13575,VGNC:VGNC:55097;Name=XM_059883979.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;model_evidence=Supporting evidence includes similarity to: 10 ESTs%2C 2 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=arylsulfatase L%2C transcript variant X8;transcript_id=Cattle_Y_T01825;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883979.1
haplotype2-0000357	CAT	exon	57061471	57061642	.	+	.	ID=Cattle_Y_E04282;Parent=Cattle_Y_T01825;Dbxref=GeneID:505899,GenBank:XM_059883979.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X8;transcript_id=Cattle_Y_T01825;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883979.1-1
haplotype2-0000357	CAT	exon	57067018	57067103	.	+	.	ID=Cattle_Y_E04283;Parent=Cattle_Y_T01825;Dbxref=GeneID:505899,GenBank:XM_059883979.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X8;transcript_id=Cattle_Y_T01825;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883979.1-2
haplotype2-0000357	CAT	exon	57067855	57068198	.	+	.	ID=Cattle_Y_E04284;Parent=Cattle_Y_T01825;Dbxref=GeneID:505899,GenBank:XM_059883979.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X8;transcript_id=Cattle_Y_T01825;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883979.1-3
haplotype2-0000357	CAT	exon	57069250	57069293	.	+	.	ID=Cattle_Y_E04285;Parent=Cattle_Y_T01825;Dbxref=GeneID:505899,GenBank:XM_059883979.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X8;transcript_id=Cattle_Y_T01825;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883979.1-4
haplotype2-0000357	CAT	exon	57073517	57073638	.	+	.	ID=Cattle_Y_E04286;Parent=Cattle_Y_T01825;Dbxref=GeneID:505899,GenBank:XM_059883979.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X8;transcript_id=Cattle_Y_T01825;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883979.1-5
haplotype2-0000357	CAT	exon	57074736	57074858	.	+	.	ID=Cattle_Y_E04287;Parent=Cattle_Y_T01825;Dbxref=GeneID:505899,GenBank:XM_059883979.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X8;transcript_id=Cattle_Y_T01825;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883979.1-6
haplotype2-0000357	CAT	exon	57076850	57077276	.	+	.	ID=Cattle_Y_E04288;Parent=Cattle_Y_T01825;Dbxref=GeneID:505899,GenBank:XM_059883979.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X8;transcript_id=Cattle_Y_T01825;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883979.1-7
haplotype2-0000357	CAT	exon	57077873	57078009	.	+	.	ID=Cattle_Y_E04289;Parent=Cattle_Y_T01825;Dbxref=GeneID:505899,GenBank:XM_059883979.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X8;transcript_id=Cattle_Y_T01825;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883979.1-8
haplotype2-0000357	CAT	exon	57078814	57078948	.	+	.	ID=Cattle_Y_E04290;Parent=Cattle_Y_T01825;Dbxref=GeneID:505899,GenBank:XM_059883979.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X8;transcript_id=Cattle_Y_T01825;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883979.1-9
haplotype2-0000357	CAT	exon	57079409	57079571	.	+	.	ID=Cattle_Y_E04291;Parent=Cattle_Y_T01825;Dbxref=GeneID:505899,GenBank:XM_059883979.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X8;transcript_id=Cattle_Y_T01825;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883979.1-10
haplotype2-0000357	CAT	exon	57081721	57081842	.	+	.	ID=Cattle_Y_E04292;Parent=Cattle_Y_T01825;Dbxref=GeneID:505899,GenBank:XM_059883979.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X8;transcript_id=Cattle_Y_T01825;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883979.1-11
haplotype2-0000357	CAT	exon	57082384	57082806	.	+	.	ID=Cattle_Y_E04293;Parent=Cattle_Y_T01825;Dbxref=GeneID:505899,GenBank:XM_059883979.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X8;transcript_id=Cattle_Y_T01825;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883979.1-12
haplotype2-0000357	CAT	CDS	57069271	57069293	.	+	0	ID=Cattle_Y_C03742;Parent=Cattle_Y_T01825;Dbxref=GeneID:505899,GenBank:XP_059739962.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739962.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739962.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01825;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57073517	57073638	.	+	1	ID=Cattle_Y_C03743;Parent=Cattle_Y_T01825;Dbxref=GeneID:505899,GenBank:XP_059739962.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739962.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739962.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01825;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57074736	57074858	.	+	2	ID=Cattle_Y_C03744;Parent=Cattle_Y_T01825;Dbxref=GeneID:505899,GenBank:XP_059739962.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739962.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739962.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01825;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57076850	57077276	.	+	2	ID=Cattle_Y_C03745;Parent=Cattle_Y_T01825;Dbxref=GeneID:505899,GenBank:XP_059739962.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739962.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739962.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01825;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57077873	57078009	.	+	1	ID=Cattle_Y_C03746;Parent=Cattle_Y_T01825;Dbxref=GeneID:505899,GenBank:XP_059739962.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739962.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739962.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01825;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57078814	57078948	.	+	2	ID=Cattle_Y_C03747;Parent=Cattle_Y_T01825;Dbxref=GeneID:505899,GenBank:XP_059739962.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739962.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739962.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01825;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57079409	57079571	.	+	2	ID=Cattle_Y_C03748;Parent=Cattle_Y_T01825;Dbxref=GeneID:505899,GenBank:XP_059739962.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739962.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739962.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01825;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57081721	57081842	.	+	1	ID=Cattle_Y_C03749;Parent=Cattle_Y_T01825;Dbxref=GeneID:505899,GenBank:XP_059739962.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739962.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739962.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01825;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57082384	57082742	.	+	2	ID=Cattle_Y_C03750;Parent=Cattle_Y_T01825;Dbxref=GeneID:505899,GenBank:XP_059739962.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739962.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739962.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01825;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57061471	57082806	.	+	.	ID=Cattle_Y_T01826;Parent=Cattle_Y_G01071;Dbxref=GeneID:505899,GenBank:XM_059883980.1,BGD:BT13575,VGNC:VGNC:55097;Name=XM_059883980.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;model_evidence=Supporting evidence includes similarity to: 10 ESTs%2C 2 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 11 samples with support for all annotated introns;product=arylsulfatase L%2C transcript variant X9;transcript_id=Cattle_Y_T01826;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883980.1
haplotype2-0000357	CAT	exon	57061471	57061642	.	+	.	ID=Cattle_Y_E04294;Parent=Cattle_Y_T01826;Dbxref=GeneID:505899,GenBank:XM_059883980.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X9;transcript_id=Cattle_Y_T01826;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883980.1-1
haplotype2-0000357	CAT	exon	57067018	57067103	.	+	.	ID=Cattle_Y_E04295;Parent=Cattle_Y_T01826;Dbxref=GeneID:505899,GenBank:XM_059883980.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X9;transcript_id=Cattle_Y_T01826;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883980.1-2
haplotype2-0000357	CAT	exon	57069250	57069293	.	+	.	ID=Cattle_Y_E04296;Parent=Cattle_Y_T01826;Dbxref=GeneID:505899,GenBank:XM_059883980.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X9;transcript_id=Cattle_Y_T01826;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883980.1-3
haplotype2-0000357	CAT	exon	57073517	57073638	.	+	.	ID=Cattle_Y_E04297;Parent=Cattle_Y_T01826;Dbxref=GeneID:505899,GenBank:XM_059883980.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X9;transcript_id=Cattle_Y_T01826;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883980.1-4
haplotype2-0000357	CAT	exon	57074736	57074858	.	+	.	ID=Cattle_Y_E04298;Parent=Cattle_Y_T01826;Dbxref=GeneID:505899,GenBank:XM_059883980.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X9;transcript_id=Cattle_Y_T01826;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883980.1-5
haplotype2-0000357	CAT	exon	57076850	57077276	.	+	.	ID=Cattle_Y_E04299;Parent=Cattle_Y_T01826;Dbxref=GeneID:505899,GenBank:XM_059883980.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X9;transcript_id=Cattle_Y_T01826;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883980.1-6
haplotype2-0000357	CAT	exon	57077873	57078009	.	+	.	ID=Cattle_Y_E04300;Parent=Cattle_Y_T01826;Dbxref=GeneID:505899,GenBank:XM_059883980.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X9;transcript_id=Cattle_Y_T01826;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883980.1-7
haplotype2-0000357	CAT	exon	57078814	57078948	.	+	.	ID=Cattle_Y_E04301;Parent=Cattle_Y_T01826;Dbxref=GeneID:505899,GenBank:XM_059883980.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X9;transcript_id=Cattle_Y_T01826;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883980.1-8
haplotype2-0000357	CAT	exon	57079409	57079571	.	+	.	ID=Cattle_Y_E04302;Parent=Cattle_Y_T01826;Dbxref=GeneID:505899,GenBank:XM_059883980.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X9;transcript_id=Cattle_Y_T01826;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883980.1-9
haplotype2-0000357	CAT	exon	57081721	57081842	.	+	.	ID=Cattle_Y_E04303;Parent=Cattle_Y_T01826;Dbxref=GeneID:505899,GenBank:XM_059883980.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X9;transcript_id=Cattle_Y_T01826;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883980.1-10
haplotype2-0000357	CAT	exon	57082384	57082806	.	+	.	ID=Cattle_Y_E04304;Parent=Cattle_Y_T01826;Dbxref=GeneID:505899,GenBank:XM_059883980.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X9;transcript_id=Cattle_Y_T01826;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883980.1-11
haplotype2-0000357	CAT	CDS	57069271	57069293	.	+	0	ID=Cattle_Y_C03751;Parent=Cattle_Y_T01826;Dbxref=GeneID:505899,GenBank:XP_059739963.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739963.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739963.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01826;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57073517	57073638	.	+	1	ID=Cattle_Y_C03752;Parent=Cattle_Y_T01826;Dbxref=GeneID:505899,GenBank:XP_059739963.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739963.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739963.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01826;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57074736	57074858	.	+	2	ID=Cattle_Y_C03753;Parent=Cattle_Y_T01826;Dbxref=GeneID:505899,GenBank:XP_059739963.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739963.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739963.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01826;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57076850	57077276	.	+	2	ID=Cattle_Y_C03754;Parent=Cattle_Y_T01826;Dbxref=GeneID:505899,GenBank:XP_059739963.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739963.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739963.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01826;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57077873	57078009	.	+	1	ID=Cattle_Y_C03755;Parent=Cattle_Y_T01826;Dbxref=GeneID:505899,GenBank:XP_059739963.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739963.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739963.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01826;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57078814	57078948	.	+	2	ID=Cattle_Y_C03756;Parent=Cattle_Y_T01826;Dbxref=GeneID:505899,GenBank:XP_059739963.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739963.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739963.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01826;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57079409	57079571	.	+	2	ID=Cattle_Y_C03757;Parent=Cattle_Y_T01826;Dbxref=GeneID:505899,GenBank:XP_059739963.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739963.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739963.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01826;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57081721	57081842	.	+	1	ID=Cattle_Y_C03758;Parent=Cattle_Y_T01826;Dbxref=GeneID:505899,GenBank:XP_059739963.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739963.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739963.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01826;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57082384	57082742	.	+	2	ID=Cattle_Y_C03759;Parent=Cattle_Y_T01826;Dbxref=GeneID:505899,GenBank:XP_059739963.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739963.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739963.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01826;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57061471	57082806	.	+	.	ID=Cattle_Y_T01827;Parent=Cattle_Y_G01071;Dbxref=GeneID:505899,GenBank:XM_059883981.1,BGD:BT13575,VGNC:VGNC:55097;Name=XM_059883981.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;model_evidence=Supporting evidence includes similarity to: 10 ESTs%2C 2 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 13 samples with support for all annotated introns;product=arylsulfatase L%2C transcript variant X10;transcript_id=Cattle_Y_T01827;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883981.1
haplotype2-0000357	CAT	exon	57061471	57061642	.	+	.	ID=Cattle_Y_E04305;Parent=Cattle_Y_T01827;Dbxref=GeneID:505899,GenBank:XM_059883981.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X10;transcript_id=Cattle_Y_T01827;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883981.1-1
haplotype2-0000357	CAT	exon	57069250	57069293	.	+	.	ID=Cattle_Y_E04306;Parent=Cattle_Y_T01827;Dbxref=GeneID:505899,GenBank:XM_059883981.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X10;transcript_id=Cattle_Y_T01827;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883981.1-2
haplotype2-0000357	CAT	exon	57073517	57073638	.	+	.	ID=Cattle_Y_E04307;Parent=Cattle_Y_T01827;Dbxref=GeneID:505899,GenBank:XM_059883981.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X10;transcript_id=Cattle_Y_T01827;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883981.1-3
haplotype2-0000357	CAT	exon	57074736	57074858	.	+	.	ID=Cattle_Y_E04308;Parent=Cattle_Y_T01827;Dbxref=GeneID:505899,GenBank:XM_059883981.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X10;transcript_id=Cattle_Y_T01827;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883981.1-4
haplotype2-0000357	CAT	exon	57076850	57077276	.	+	.	ID=Cattle_Y_E04309;Parent=Cattle_Y_T01827;Dbxref=GeneID:505899,GenBank:XM_059883981.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X10;transcript_id=Cattle_Y_T01827;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883981.1-5
haplotype2-0000357	CAT	exon	57077873	57078009	.	+	.	ID=Cattle_Y_E04310;Parent=Cattle_Y_T01827;Dbxref=GeneID:505899,GenBank:XM_059883981.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X10;transcript_id=Cattle_Y_T01827;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883981.1-6
haplotype2-0000357	CAT	exon	57078814	57078948	.	+	.	ID=Cattle_Y_E04311;Parent=Cattle_Y_T01827;Dbxref=GeneID:505899,GenBank:XM_059883981.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X10;transcript_id=Cattle_Y_T01827;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883981.1-7
haplotype2-0000357	CAT	exon	57079409	57079571	.	+	.	ID=Cattle_Y_E04312;Parent=Cattle_Y_T01827;Dbxref=GeneID:505899,GenBank:XM_059883981.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X10;transcript_id=Cattle_Y_T01827;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883981.1-8
haplotype2-0000357	CAT	exon	57081721	57081842	.	+	.	ID=Cattle_Y_E04313;Parent=Cattle_Y_T01827;Dbxref=GeneID:505899,GenBank:XM_059883981.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X10;transcript_id=Cattle_Y_T01827;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883981.1-9
haplotype2-0000357	CAT	exon	57082384	57082806	.	+	.	ID=Cattle_Y_E04314;Parent=Cattle_Y_T01827;Dbxref=GeneID:505899,GenBank:XM_059883981.1,BGD:BT13575,VGNC:VGNC:55097;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ARSL;product=arylsulfatase L, transcript variant X10;transcript_id=Cattle_Y_T01827;gene_id=Cattle_Y_G01071;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883981.1-10
haplotype2-0000357	CAT	CDS	57069271	57069293	.	+	0	ID=Cattle_Y_C03760;Parent=Cattle_Y_T01827;Dbxref=GeneID:505899,GenBank:XP_059739964.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739964.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739964.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01827;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57073517	57073638	.	+	1	ID=Cattle_Y_C03761;Parent=Cattle_Y_T01827;Dbxref=GeneID:505899,GenBank:XP_059739964.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739964.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739964.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01827;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57074736	57074858	.	+	2	ID=Cattle_Y_C03762;Parent=Cattle_Y_T01827;Dbxref=GeneID:505899,GenBank:XP_059739964.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739964.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739964.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01827;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57076850	57077276	.	+	2	ID=Cattle_Y_C03763;Parent=Cattle_Y_T01827;Dbxref=GeneID:505899,GenBank:XP_059739964.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739964.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739964.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01827;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57077873	57078009	.	+	1	ID=Cattle_Y_C03764;Parent=Cattle_Y_T01827;Dbxref=GeneID:505899,GenBank:XP_059739964.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739964.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739964.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01827;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57078814	57078948	.	+	2	ID=Cattle_Y_C03765;Parent=Cattle_Y_T01827;Dbxref=GeneID:505899,GenBank:XP_059739964.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739964.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739964.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01827;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57079409	57079571	.	+	2	ID=Cattle_Y_C03766;Parent=Cattle_Y_T01827;Dbxref=GeneID:505899,GenBank:XP_059739964.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739964.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739964.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01827;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57081721	57081842	.	+	1	ID=Cattle_Y_C03767;Parent=Cattle_Y_T01827;Dbxref=GeneID:505899,GenBank:XP_059739964.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739964.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739964.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01827;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57082384	57082742	.	+	2	ID=Cattle_Y_C03768;Parent=Cattle_Y_T01827;Dbxref=GeneID:505899,GenBank:XP_059739964.1,BGD:BT13575,VGNC:VGNC:55097;Name=XP_059739964.1;gbkey=CDS;gene=ARSL;product=arylsulfatase L isoform X4;protein_id=XP_059739964.1;gene_id=Cattle_Y_G01071;transcript_id=Cattle_Y_T01827;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	57085153	57100848	.	+	.	ID=Cattle_Y_G01072;Dbxref=BGD:BT17267,GeneID:516494;Name=LOC516494;description=arylsulfatase D;gbkey=Gene;gene=LOC516494;gene_biotype=protein_coding;gene_id=Cattle_Y_G01072;source_id=gene-LOC516494-2
haplotype2-0000357	CAT	mRNA	57085153	57100848	.	+	.	ID=Cattle_Y_T01828;Parent=Cattle_Y_G01072;Dbxref=GeneID:516494,GenBank:XM_024988470.2,BGD:BT17267;Name=XM_024988470.2;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC516494;model_evidence=Supporting evidence includes similarity to: 23 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 27 samples with support for all annotated introns;product=arylsulfatase D;transcript_id=Cattle_Y_T01828;gene_id=Cattle_Y_G01072;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_024988470.2
haplotype2-0000357	CAT	exon	57085153	57085216	.	+	.	ID=Cattle_Y_E04315;Parent=Cattle_Y_T01828;Dbxref=GeneID:516494,GenBank:XM_024988470.2,BGD:BT17267;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC516494;product=arylsulfatase D;transcript_id=Cattle_Y_T01828;gene_id=Cattle_Y_G01072;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988470.2-1
haplotype2-0000357	CAT	exon	57088097	57088246	.	+	.	ID=Cattle_Y_E04316;Parent=Cattle_Y_T01828;Dbxref=GeneID:516494,GenBank:XM_024988470.2,BGD:BT17267;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC516494;product=arylsulfatase D;transcript_id=Cattle_Y_T01828;gene_id=Cattle_Y_G01072;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988470.2-1
haplotype2-0000357	CAT	exon	57089173	57089294	.	+	.	ID=Cattle_Y_E04317;Parent=Cattle_Y_T01828;Dbxref=GeneID:516494,GenBank:XM_024988470.2,BGD:BT17267;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC516494;product=arylsulfatase D;transcript_id=Cattle_Y_T01828;gene_id=Cattle_Y_G01072;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988470.2-1
haplotype2-0000357	CAT	exon	57090721	57090843	.	+	.	ID=Cattle_Y_E04318;Parent=Cattle_Y_T01828;Dbxref=GeneID:516494,GenBank:XM_024988470.2,BGD:BT17267;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC516494;product=arylsulfatase D;transcript_id=Cattle_Y_T01828;gene_id=Cattle_Y_G01072;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988470.2-1
haplotype2-0000357	CAT	exon	57092745	57093168	.	+	.	ID=Cattle_Y_E04319;Parent=Cattle_Y_T01828;Dbxref=GeneID:516494,GenBank:XM_024988470.2,BGD:BT17267;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC516494;product=arylsulfatase D;transcript_id=Cattle_Y_T01828;gene_id=Cattle_Y_G01072;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988470.2-1
haplotype2-0000357	CAT	exon	57094041	57094177	.	+	.	ID=Cattle_Y_E04320;Parent=Cattle_Y_T01828;Dbxref=GeneID:516494,GenBank:XM_024988470.2,BGD:BT17267;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC516494;product=arylsulfatase D;transcript_id=Cattle_Y_T01828;gene_id=Cattle_Y_G01072;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988470.2-1
haplotype2-0000357	CAT	exon	57094852	57094986	.	+	.	ID=Cattle_Y_E04321;Parent=Cattle_Y_T01828;Dbxref=GeneID:516494,GenBank:XM_024988470.2,BGD:BT17267;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC516494;product=arylsulfatase D;transcript_id=Cattle_Y_T01828;gene_id=Cattle_Y_G01072;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988470.2-1
haplotype2-0000357	CAT	exon	57095658	57095820	.	+	.	ID=Cattle_Y_E04322;Parent=Cattle_Y_T01828;Dbxref=GeneID:516494,GenBank:XM_024988470.2,BGD:BT17267;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC516494;product=arylsulfatase D;transcript_id=Cattle_Y_T01828;gene_id=Cattle_Y_G01072;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988470.2-1
haplotype2-0000357	CAT	exon	57097715	57097836	.	+	.	ID=Cattle_Y_E04323;Parent=Cattle_Y_T01828;Dbxref=GeneID:516494,GenBank:XM_024988470.2,BGD:BT17267;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC516494;product=arylsulfatase D;transcript_id=Cattle_Y_T01828;gene_id=Cattle_Y_G01072;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988470.2-1
haplotype2-0000357	CAT	exon	57099683	57100848	.	+	.	ID=Cattle_Y_E04324;Parent=Cattle_Y_T01828;Dbxref=GeneID:516494,GenBank:XM_024988470.2,BGD:BT17267;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC516494;product=arylsulfatase D;transcript_id=Cattle_Y_T01828;gene_id=Cattle_Y_G01072;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988470.2-10
haplotype2-0000357	CAT	CDS	57085173	57085216	.	+	0	ID=Cattle_Y_C03769;Parent=Cattle_Y_T01828;gene_id=Cattle_Y_G01072;transcript_id=Cattle_Y_T01828;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57088097	57088246	.	+	1	ID=Cattle_Y_C03770;Parent=Cattle_Y_T01828;gene_id=Cattle_Y_G01072;transcript_id=Cattle_Y_T01828;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57089173	57089294	.	+	1	ID=Cattle_Y_C03771;Parent=Cattle_Y_T01828;gene_id=Cattle_Y_G01072;transcript_id=Cattle_Y_T01828;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57090721	57090843	.	+	2	ID=Cattle_Y_C03772;Parent=Cattle_Y_T01828;gene_id=Cattle_Y_G01072;transcript_id=Cattle_Y_T01828;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57092745	57093168	.	+	2	ID=Cattle_Y_C03773;Parent=Cattle_Y_T01828;gene_id=Cattle_Y_G01072;transcript_id=Cattle_Y_T01828;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57094041	57094177	.	+	1	ID=Cattle_Y_C03774;Parent=Cattle_Y_T01828;gene_id=Cattle_Y_G01072;transcript_id=Cattle_Y_T01828;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57094852	57094986	.	+	2	ID=Cattle_Y_C03775;Parent=Cattle_Y_T01828;gene_id=Cattle_Y_G01072;transcript_id=Cattle_Y_T01828;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57095658	57095820	.	+	2	ID=Cattle_Y_C03776;Parent=Cattle_Y_T01828;gene_id=Cattle_Y_G01072;transcript_id=Cattle_Y_T01828;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57097715	57097836	.	+	1	ID=Cattle_Y_C03777;Parent=Cattle_Y_T01828;gene_id=Cattle_Y_G01072;transcript_id=Cattle_Y_T01828;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57099683	57100047	.	+	2	ID=Cattle_Y_C03778;Parent=Cattle_Y_T01828;gene_id=Cattle_Y_G01072;transcript_id=Cattle_Y_T01828;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	57105313	57131702	.	-	.	ID=Cattle_Y_G01073;Dbxref=BGD:BT29521,GeneID:505258,VGNC:VGNC:29729;Name=GYG2;description=glycogenin 2;gbkey=Gene;gene=GYG2;gene_biotype=protein_coding;gene_id=Cattle_Y_G01073;source_id=gene-GYG2-2
haplotype2-0000357	CAT	mRNA	57105313	57131318	.	-	.	ID=Cattle_Y_T01829;Parent=Cattle_Y_G01073;Dbxref=GeneID:505258,GenBank:XM_005228480.4,BGD:BT29521,VGNC:VGNC:29729;Name=XM_005228480.4;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;model_evidence=Supporting evidence includes similarity to: 19 ESTs%2C 15 Proteins%2C 12 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 37 samples with support for all annotated introns;product=glycogenin 2%2C transcript variant X8;transcript_id=Cattle_Y_T01829;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_005228480.4
haplotype2-0000357	CAT	exon	57105313	57108172	.	-	.	ID=Cattle_Y_E04325;Parent=Cattle_Y_T01829;Dbxref=GeneID:505258,GenBank:XM_005228480.4,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X8;transcript_id=Cattle_Y_T01829;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228480.4-11
haplotype2-0000357	CAT	exon	57109288	57109395	.	-	.	ID=Cattle_Y_E04326;Parent=Cattle_Y_T01829;Dbxref=GeneID:505258,GenBank:XM_005228480.4,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X8;transcript_id=Cattle_Y_T01829;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228480.4-11
haplotype2-0000357	CAT	exon	57110895	57110999	.	-	.	ID=Cattle_Y_E04327;Parent=Cattle_Y_T01829;Dbxref=GeneID:505258,GenBank:XM_005228480.4,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X8;transcript_id=Cattle_Y_T01829;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228480.4-11
haplotype2-0000357	CAT	exon	57115405	57115575	.	-	.	ID=Cattle_Y_E04328;Parent=Cattle_Y_T01829;Dbxref=GeneID:505258,GenBank:XM_005228480.4,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X8;transcript_id=Cattle_Y_T01829;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228480.4-11
haplotype2-0000357	CAT	exon	57118382	57118604	.	-	.	ID=Cattle_Y_E04329;Parent=Cattle_Y_T01829;Dbxref=GeneID:505258,GenBank:XM_005228480.4,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X8;transcript_id=Cattle_Y_T01829;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228480.4-11
haplotype2-0000357	CAT	exon	57119938	57120064	.	-	.	ID=Cattle_Y_E04330;Parent=Cattle_Y_T01829;Dbxref=GeneID:505258,GenBank:XM_005228480.4,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X8;transcript_id=Cattle_Y_T01829;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228480.4-11
haplotype2-0000357	CAT	exon	57120294	57120456	.	-	.	ID=Cattle_Y_E04331;Parent=Cattle_Y_T01829;Dbxref=GeneID:505258,GenBank:XM_005228480.4,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X8;transcript_id=Cattle_Y_T01829;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228480.4-11
haplotype2-0000357	CAT	exon	57123421	57123595	.	-	.	ID=Cattle_Y_E04332;Parent=Cattle_Y_T01829;Dbxref=GeneID:505258,GenBank:XM_005228480.4,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X8;transcript_id=Cattle_Y_T01829;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228480.4-11
haplotype2-0000357	CAT	exon	57125635	57125776	.	-	.	ID=Cattle_Y_E04333;Parent=Cattle_Y_T01829;Dbxref=GeneID:505258,GenBank:XM_005228480.4,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X8;transcript_id=Cattle_Y_T01829;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228480.4-11
haplotype2-0000357	CAT	exon	57130439	57130589	.	-	.	ID=Cattle_Y_E04334;Parent=Cattle_Y_T01829;Dbxref=GeneID:505258,GenBank:XM_005228480.4,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X8;transcript_id=Cattle_Y_T01829;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228480.4-2
haplotype2-0000357	CAT	exon	57131144	57131318	.	-	.	ID=Cattle_Y_E04335;Parent=Cattle_Y_T01829;Dbxref=GeneID:505258,GenBank:XM_005228480.4,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X8;transcript_id=Cattle_Y_T01829;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228480.4-1
haplotype2-0000357	CAT	CDS	57108011	57108172	.	-	0	ID=Cattle_Y_C03779;Parent=Cattle_Y_T01829;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01829;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57109288	57109395	.	-	0	ID=Cattle_Y_C03780;Parent=Cattle_Y_T01829;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01829;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57110895	57110999	.	-	0	ID=Cattle_Y_C03781;Parent=Cattle_Y_T01829;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01829;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57115405	57115575	.	-	0	ID=Cattle_Y_C03782;Parent=Cattle_Y_T01829;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01829;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57118382	57118604	.	-	1	ID=Cattle_Y_C03783;Parent=Cattle_Y_T01829;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01829;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57119938	57120064	.	-	2	ID=Cattle_Y_C03784;Parent=Cattle_Y_T01829;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01829;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57120294	57120456	.	-	0	ID=Cattle_Y_C03785;Parent=Cattle_Y_T01829;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01829;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57123421	57123595	.	-	1	ID=Cattle_Y_C03786;Parent=Cattle_Y_T01829;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01829;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57125635	57125776	.	-	2	ID=Cattle_Y_C03787;Parent=Cattle_Y_T01829;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01829;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57130439	57130445	.	-	0	ID=Cattle_Y_C03788;Parent=Cattle_Y_T01829;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01829;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57105313	57130956	.	-	.	ID=Cattle_Y_T01830;Parent=Cattle_Y_G01073;Dbxref=GeneID:505258,GenBank:XM_005228481.5,BGD:BT29521,VGNC:VGNC:29729;Name=XM_005228481.5;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;model_evidence=Supporting evidence includes similarity to: 19 ESTs%2C 15 Proteins%2C 12 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 22 samples with support for all annotated introns;product=glycogenin 2%2C transcript variant X9;transcript_id=Cattle_Y_T01830;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_005228481.5
haplotype2-0000357	CAT	exon	57105313	57108172	.	-	.	ID=Cattle_Y_E04336;Parent=Cattle_Y_T01830;Dbxref=GeneID:505258,GenBank:XM_005228481.5,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X9;transcript_id=Cattle_Y_T01830;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228481.5-11
haplotype2-0000357	CAT	exon	57109288	57109395	.	-	.	ID=Cattle_Y_E04337;Parent=Cattle_Y_T01830;Dbxref=GeneID:505258,GenBank:XM_005228481.5,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X9;transcript_id=Cattle_Y_T01830;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228481.5-11
haplotype2-0000357	CAT	exon	57110895	57110999	.	-	.	ID=Cattle_Y_E04338;Parent=Cattle_Y_T01830;Dbxref=GeneID:505258,GenBank:XM_005228481.5,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X9;transcript_id=Cattle_Y_T01830;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228481.5-11
haplotype2-0000357	CAT	exon	57115405	57115575	.	-	.	ID=Cattle_Y_E04339;Parent=Cattle_Y_T01830;Dbxref=GeneID:505258,GenBank:XM_005228481.5,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X9;transcript_id=Cattle_Y_T01830;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228481.5-11
haplotype2-0000357	CAT	exon	57118382	57118604	.	-	.	ID=Cattle_Y_E04340;Parent=Cattle_Y_T01830;Dbxref=GeneID:505258,GenBank:XM_005228481.5,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X9;transcript_id=Cattle_Y_T01830;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228481.5-11
haplotype2-0000357	CAT	exon	57119938	57120064	.	-	.	ID=Cattle_Y_E04341;Parent=Cattle_Y_T01830;Dbxref=GeneID:505258,GenBank:XM_005228481.5,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X9;transcript_id=Cattle_Y_T01830;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228481.5-11
haplotype2-0000357	CAT	exon	57120294	57120456	.	-	.	ID=Cattle_Y_E04342;Parent=Cattle_Y_T01830;Dbxref=GeneID:505258,GenBank:XM_005228481.5,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X9;transcript_id=Cattle_Y_T01830;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228481.5-11
haplotype2-0000357	CAT	exon	57123421	57123595	.	-	.	ID=Cattle_Y_E04343;Parent=Cattle_Y_T01830;Dbxref=GeneID:505258,GenBank:XM_005228481.5,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X9;transcript_id=Cattle_Y_T01830;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228481.5-11
haplotype2-0000357	CAT	exon	57125635	57125776	.	-	.	ID=Cattle_Y_E04344;Parent=Cattle_Y_T01830;Dbxref=GeneID:505258,GenBank:XM_005228481.5,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X9;transcript_id=Cattle_Y_T01830;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228481.5-11
haplotype2-0000357	CAT	exon	57130439	57130589	.	-	.	ID=Cattle_Y_E04345;Parent=Cattle_Y_T01830;Dbxref=GeneID:505258,GenBank:XM_005228481.5,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X9;transcript_id=Cattle_Y_T01830;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228481.5-2
haplotype2-0000357	CAT	exon	57130824	57130956	.	-	.	ID=Cattle_Y_E04346;Parent=Cattle_Y_T01830;Dbxref=GeneID:505258,GenBank:XM_005228481.5,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X9;transcript_id=Cattle_Y_T01830;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228481.5-1
haplotype2-0000357	CAT	CDS	57108011	57108172	.	-	0	ID=Cattle_Y_C03789;Parent=Cattle_Y_T01830;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01830;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57109288	57109395	.	-	0	ID=Cattle_Y_C03790;Parent=Cattle_Y_T01830;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01830;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57110895	57110999	.	-	0	ID=Cattle_Y_C03791;Parent=Cattle_Y_T01830;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01830;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57115405	57115575	.	-	0	ID=Cattle_Y_C03792;Parent=Cattle_Y_T01830;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01830;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57118382	57118604	.	-	1	ID=Cattle_Y_C03793;Parent=Cattle_Y_T01830;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01830;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57119938	57120064	.	-	2	ID=Cattle_Y_C03794;Parent=Cattle_Y_T01830;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01830;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57120294	57120456	.	-	0	ID=Cattle_Y_C03795;Parent=Cattle_Y_T01830;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01830;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57123421	57123595	.	-	1	ID=Cattle_Y_C03796;Parent=Cattle_Y_T01830;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01830;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57125635	57125776	.	-	2	ID=Cattle_Y_C03797;Parent=Cattle_Y_T01830;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01830;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57130439	57130445	.	-	0	ID=Cattle_Y_C03798;Parent=Cattle_Y_T01830;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01830;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57105313	57131702	.	-	.	ID=Cattle_Y_T01831;Parent=Cattle_Y_G01073;Dbxref=GeneID:505258,GenBank:XM_005228482.4,BGD:BT29521,VGNC:VGNC:29729;Name=XM_005228482.4;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;model_evidence=Supporting evidence includes similarity to: 19 ESTs%2C 15 Proteins%2C 12 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 13 samples with support for all annotated introns;product=glycogenin 2%2C transcript variant X5;transcript_id=Cattle_Y_T01831;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_005228482.4
haplotype2-0000357	CAT	exon	57105313	57108172	.	-	.	ID=Cattle_Y_E04347;Parent=Cattle_Y_T01831;Dbxref=GeneID:505258,GenBank:XM_005228482.4,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X5;transcript_id=Cattle_Y_T01831;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228482.4-11
haplotype2-0000357	CAT	exon	57109288	57109395	.	-	.	ID=Cattle_Y_E04348;Parent=Cattle_Y_T01831;Dbxref=GeneID:505258,GenBank:XM_005228482.4,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X5;transcript_id=Cattle_Y_T01831;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228482.4-11
haplotype2-0000357	CAT	exon	57110895	57110999	.	-	.	ID=Cattle_Y_E04349;Parent=Cattle_Y_T01831;Dbxref=GeneID:505258,GenBank:XM_005228482.4,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X5;transcript_id=Cattle_Y_T01831;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228482.4-11
haplotype2-0000357	CAT	exon	57115405	57115575	.	-	.	ID=Cattle_Y_E04350;Parent=Cattle_Y_T01831;Dbxref=GeneID:505258,GenBank:XM_005228482.4,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X5;transcript_id=Cattle_Y_T01831;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228482.4-11
haplotype2-0000357	CAT	exon	57118382	57118604	.	-	.	ID=Cattle_Y_E04351;Parent=Cattle_Y_T01831;Dbxref=GeneID:505258,GenBank:XM_005228482.4,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X5;transcript_id=Cattle_Y_T01831;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228482.4-11
haplotype2-0000357	CAT	exon	57119938	57120064	.	-	.	ID=Cattle_Y_E04352;Parent=Cattle_Y_T01831;Dbxref=GeneID:505258,GenBank:XM_005228482.4,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X5;transcript_id=Cattle_Y_T01831;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228482.4-11
haplotype2-0000357	CAT	exon	57120294	57120456	.	-	.	ID=Cattle_Y_E04353;Parent=Cattle_Y_T01831;Dbxref=GeneID:505258,GenBank:XM_005228482.4,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X5;transcript_id=Cattle_Y_T01831;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228482.4-11
haplotype2-0000357	CAT	exon	57123421	57123595	.	-	.	ID=Cattle_Y_E04354;Parent=Cattle_Y_T01831;Dbxref=GeneID:505258,GenBank:XM_005228482.4,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X5;transcript_id=Cattle_Y_T01831;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228482.4-11
haplotype2-0000357	CAT	exon	57125635	57125776	.	-	.	ID=Cattle_Y_E04355;Parent=Cattle_Y_T01831;Dbxref=GeneID:505258,GenBank:XM_005228482.4,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X5;transcript_id=Cattle_Y_T01831;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228482.4-11
haplotype2-0000357	CAT	exon	57130439	57130589	.	-	.	ID=Cattle_Y_E04356;Parent=Cattle_Y_T01831;Dbxref=GeneID:505258,GenBank:XM_005228482.4,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X5;transcript_id=Cattle_Y_T01831;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228482.4-11
haplotype2-0000357	CAT	exon	57131412	57131702	.	-	.	ID=Cattle_Y_E04357;Parent=Cattle_Y_T01831;Dbxref=GeneID:505258,GenBank:XM_005228482.4,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X5;transcript_id=Cattle_Y_T01831;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_005228482.4-1
haplotype2-0000357	CAT	CDS	57108011	57108172	.	-	0	ID=Cattle_Y_C03799;Parent=Cattle_Y_T01831;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01831;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57109288	57109395	.	-	0	ID=Cattle_Y_C03800;Parent=Cattle_Y_T01831;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01831;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57110895	57110999	.	-	0	ID=Cattle_Y_C03801;Parent=Cattle_Y_T01831;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01831;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57115405	57115575	.	-	0	ID=Cattle_Y_C03802;Parent=Cattle_Y_T01831;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01831;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57118382	57118604	.	-	1	ID=Cattle_Y_C03803;Parent=Cattle_Y_T01831;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01831;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57119938	57120064	.	-	2	ID=Cattle_Y_C03804;Parent=Cattle_Y_T01831;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01831;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57120294	57120456	.	-	0	ID=Cattle_Y_C03805;Parent=Cattle_Y_T01831;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01831;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57123421	57123595	.	-	1	ID=Cattle_Y_C03806;Parent=Cattle_Y_T01831;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01831;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57125635	57125776	.	-	2	ID=Cattle_Y_C03807;Parent=Cattle_Y_T01831;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01831;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57130439	57130589	.	-	0	ID=Cattle_Y_C03808;Parent=Cattle_Y_T01831;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01831;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57131412	57131699	.	-	0	ID=Cattle_Y_C03809;Parent=Cattle_Y_T01831;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01831;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57105313	57131702	.	-	.	ID=Cattle_Y_T01832;Parent=Cattle_Y_G01073;Dbxref=GeneID:505258,GenBank:XM_024988448.2,BGD:BT29521,VGNC:VGNC:29729;Name=XM_024988448.2;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;model_evidence=Supporting evidence includes similarity to: 18 ESTs%2C 15 Proteins%2C 11 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 15 samples with support for all annotated introns;product=glycogenin 2%2C transcript variant X1;transcript_id=Cattle_Y_T01832;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_024988448.2
haplotype2-0000357	CAT	exon	57105313	57108172	.	-	.	ID=Cattle_Y_E04358;Parent=Cattle_Y_T01832;Dbxref=GeneID:505258,GenBank:XM_024988448.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X1;transcript_id=Cattle_Y_T01832;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988448.2-10
haplotype2-0000357	CAT	exon	57109288	57109395	.	-	.	ID=Cattle_Y_E04359;Parent=Cattle_Y_T01832;Dbxref=GeneID:505258,GenBank:XM_024988448.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X1;transcript_id=Cattle_Y_T01832;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988448.2-10
haplotype2-0000357	CAT	exon	57110895	57110999	.	-	.	ID=Cattle_Y_E04360;Parent=Cattle_Y_T01832;Dbxref=GeneID:505258,GenBank:XM_024988448.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X1;transcript_id=Cattle_Y_T01832;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988448.2-10
haplotype2-0000357	CAT	exon	57115405	57115575	.	-	.	ID=Cattle_Y_E04361;Parent=Cattle_Y_T01832;Dbxref=GeneID:505258,GenBank:XM_024988448.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X1;transcript_id=Cattle_Y_T01832;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988448.2-10
haplotype2-0000357	CAT	exon	57118382	57118604	.	-	.	ID=Cattle_Y_E04362;Parent=Cattle_Y_T01832;Dbxref=GeneID:505258,GenBank:XM_024988448.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X1;transcript_id=Cattle_Y_T01832;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988448.2-10
haplotype2-0000357	CAT	exon	57119938	57120064	.	-	.	ID=Cattle_Y_E04363;Parent=Cattle_Y_T01832;Dbxref=GeneID:505258,GenBank:XM_024988448.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X1;transcript_id=Cattle_Y_T01832;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988448.2-10
haplotype2-0000357	CAT	exon	57120294	57120456	.	-	.	ID=Cattle_Y_E04364;Parent=Cattle_Y_T01832;Dbxref=GeneID:505258,GenBank:XM_024988448.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X1;transcript_id=Cattle_Y_T01832;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988448.2-10
haplotype2-0000357	CAT	exon	57123421	57123595	.	-	.	ID=Cattle_Y_E04365;Parent=Cattle_Y_T01832;Dbxref=GeneID:505258,GenBank:XM_024988448.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X1;transcript_id=Cattle_Y_T01832;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988448.2-10
haplotype2-0000357	CAT	exon	57125635	57125776	.	-	.	ID=Cattle_Y_E04366;Parent=Cattle_Y_T01832;Dbxref=GeneID:505258,GenBank:XM_024988448.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X1;transcript_id=Cattle_Y_T01832;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988448.2-10
haplotype2-0000357	CAT	exon	57131144	57131702	.	-	.	ID=Cattle_Y_E04367;Parent=Cattle_Y_T01832;Dbxref=GeneID:505258,GenBank:XM_024988448.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X1;transcript_id=Cattle_Y_T01832;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988448.2-1
haplotype2-0000357	CAT	CDS	57108011	57108172	.	-	0	ID=Cattle_Y_C03810;Parent=Cattle_Y_T01832;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01832;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57109288	57109395	.	-	0	ID=Cattle_Y_C03811;Parent=Cattle_Y_T01832;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01832;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57110895	57110999	.	-	0	ID=Cattle_Y_C03812;Parent=Cattle_Y_T01832;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01832;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57115405	57115575	.	-	0	ID=Cattle_Y_C03813;Parent=Cattle_Y_T01832;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01832;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57118382	57118604	.	-	1	ID=Cattle_Y_C03814;Parent=Cattle_Y_T01832;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01832;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57119938	57120064	.	-	2	ID=Cattle_Y_C03815;Parent=Cattle_Y_T01832;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01832;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57120294	57120456	.	-	0	ID=Cattle_Y_C03816;Parent=Cattle_Y_T01832;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01832;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57123421	57123595	.	-	1	ID=Cattle_Y_C03817;Parent=Cattle_Y_T01832;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01832;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57125635	57125776	.	-	2	ID=Cattle_Y_C03818;Parent=Cattle_Y_T01832;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01832;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57131144	57131699	.	-	0	ID=Cattle_Y_C03819;Parent=Cattle_Y_T01832;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01832;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57113438	57131702	.	-	.	ID=Cattle_Y_T01833;Parent=Cattle_Y_G01073;Dbxref=GeneID:505258,GenBank:XM_024988449.2,BGD:BT29521,VGNC:VGNC:29729;Name=XM_024988449.2;gbkey=mRNA;gene=GYG2;model_evidence=Supporting evidence includes similarity to: 7 ESTs%2C 7 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 20 samples with support for all annotated introns;product=glycogenin 2%2C transcript variant X2;transcript_id=Cattle_Y_T01833;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_024988449.2
haplotype2-0000357	CAT	exon	57113438	57114295	.	-	.	ID=Cattle_Y_E04368;Parent=Cattle_Y_T01833;Dbxref=GeneID:505258,GenBank:XM_024988449.2,BGD:BT29521,VGNC:VGNC:29729;gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X2;transcript_id=Cattle_Y_T01833;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988449.2-8
haplotype2-0000357	CAT	exon	57115405	57115575	.	-	.	ID=Cattle_Y_E04369;Parent=Cattle_Y_T01833;Dbxref=GeneID:505258,GenBank:XM_024988449.2,BGD:BT29521,VGNC:VGNC:29729;gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X2;transcript_id=Cattle_Y_T01833;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988449.2-8
haplotype2-0000357	CAT	exon	57118382	57118604	.	-	.	ID=Cattle_Y_E04370;Parent=Cattle_Y_T01833;Dbxref=GeneID:505258,GenBank:XM_024988449.2,BGD:BT29521,VGNC:VGNC:29729;gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X2;transcript_id=Cattle_Y_T01833;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988449.2-8
haplotype2-0000357	CAT	exon	57119938	57120064	.	-	.	ID=Cattle_Y_E04371;Parent=Cattle_Y_T01833;Dbxref=GeneID:505258,GenBank:XM_024988449.2,BGD:BT29521,VGNC:VGNC:29729;gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X2;transcript_id=Cattle_Y_T01833;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988449.2-8
haplotype2-0000357	CAT	exon	57120294	57120456	.	-	.	ID=Cattle_Y_E04372;Parent=Cattle_Y_T01833;Dbxref=GeneID:505258,GenBank:XM_024988449.2,BGD:BT29521,VGNC:VGNC:29729;gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X2;transcript_id=Cattle_Y_T01833;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988449.2-8
haplotype2-0000357	CAT	exon	57123421	57123595	.	-	.	ID=Cattle_Y_E04373;Parent=Cattle_Y_T01833;Dbxref=GeneID:505258,GenBank:XM_024988449.2,BGD:BT29521,VGNC:VGNC:29729;gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X2;transcript_id=Cattle_Y_T01833;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988449.2-8
haplotype2-0000357	CAT	exon	57125635	57125776	.	-	.	ID=Cattle_Y_E04374;Parent=Cattle_Y_T01833;Dbxref=GeneID:505258,GenBank:XM_024988449.2,BGD:BT29521,VGNC:VGNC:29729;gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X2;transcript_id=Cattle_Y_T01833;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988449.2-8
haplotype2-0000357	CAT	exon	57131144	57131702	.	-	.	ID=Cattle_Y_E04375;Parent=Cattle_Y_T01833;Dbxref=GeneID:505258,GenBank:XM_024988449.2,BGD:BT29521,VGNC:VGNC:29729;gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X2;transcript_id=Cattle_Y_T01833;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988449.2-1
haplotype2-0000357	CAT	CDS	57114014	57114295	.	-	0	ID=Cattle_Y_C03820;Parent=Cattle_Y_T01833;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01833;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57115405	57115575	.	-	0	ID=Cattle_Y_C03821;Parent=Cattle_Y_T01833;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01833;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57118382	57118604	.	-	1	ID=Cattle_Y_C03822;Parent=Cattle_Y_T01833;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01833;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57119938	57120064	.	-	2	ID=Cattle_Y_C03823;Parent=Cattle_Y_T01833;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01833;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57120294	57120456	.	-	0	ID=Cattle_Y_C03824;Parent=Cattle_Y_T01833;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01833;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57123421	57123595	.	-	1	ID=Cattle_Y_C03825;Parent=Cattle_Y_T01833;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01833;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57125635	57125776	.	-	2	ID=Cattle_Y_C03826;Parent=Cattle_Y_T01833;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01833;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57131144	57131699	.	-	0	ID=Cattle_Y_C03827;Parent=Cattle_Y_T01833;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01833;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57105313	57131702	.	-	.	ID=Cattle_Y_T01834;Parent=Cattle_Y_G01073;Dbxref=GeneID:505258,GenBank:XM_024988450.2,BGD:BT29521,VGNC:VGNC:29729;Name=XM_024988450.2;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;model_evidence=Supporting evidence includes similarity to: 18 ESTs%2C 15 Proteins%2C 11 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 10 samples with support for all annotated introns;product=glycogenin 2%2C transcript variant X3;transcript_id=Cattle_Y_T01834;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_024988450.2
haplotype2-0000357	CAT	exon	57105313	57108172	.	-	.	ID=Cattle_Y_E04376;Parent=Cattle_Y_T01834;Dbxref=GeneID:505258,GenBank:XM_024988450.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X3;transcript_id=Cattle_Y_T01834;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988450.2-9
haplotype2-0000357	CAT	exon	57109288	57109395	.	-	.	ID=Cattle_Y_E04377;Parent=Cattle_Y_T01834;Dbxref=GeneID:505258,GenBank:XM_024988450.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X3;transcript_id=Cattle_Y_T01834;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988450.2-9
haplotype2-0000357	CAT	exon	57115405	57115575	.	-	.	ID=Cattle_Y_E04378;Parent=Cattle_Y_T01834;Dbxref=GeneID:505258,GenBank:XM_024988450.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X3;transcript_id=Cattle_Y_T01834;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988450.2-9
haplotype2-0000357	CAT	exon	57118382	57118604	.	-	.	ID=Cattle_Y_E04379;Parent=Cattle_Y_T01834;Dbxref=GeneID:505258,GenBank:XM_024988450.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X3;transcript_id=Cattle_Y_T01834;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988450.2-9
haplotype2-0000357	CAT	exon	57119938	57120064	.	-	.	ID=Cattle_Y_E04380;Parent=Cattle_Y_T01834;Dbxref=GeneID:505258,GenBank:XM_024988450.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X3;transcript_id=Cattle_Y_T01834;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988450.2-9
haplotype2-0000357	CAT	exon	57120294	57120456	.	-	.	ID=Cattle_Y_E04381;Parent=Cattle_Y_T01834;Dbxref=GeneID:505258,GenBank:XM_024988450.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X3;transcript_id=Cattle_Y_T01834;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988450.2-9
haplotype2-0000357	CAT	exon	57123421	57123595	.	-	.	ID=Cattle_Y_E04382;Parent=Cattle_Y_T01834;Dbxref=GeneID:505258,GenBank:XM_024988450.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X3;transcript_id=Cattle_Y_T01834;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988450.2-9
haplotype2-0000357	CAT	exon	57125635	57125776	.	-	.	ID=Cattle_Y_E04383;Parent=Cattle_Y_T01834;Dbxref=GeneID:505258,GenBank:XM_024988450.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X3;transcript_id=Cattle_Y_T01834;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988450.2-9
haplotype2-0000357	CAT	exon	57131144	57131702	.	-	.	ID=Cattle_Y_E04384;Parent=Cattle_Y_T01834;Dbxref=GeneID:505258,GenBank:XM_024988450.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X3;transcript_id=Cattle_Y_T01834;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988450.2-1
haplotype2-0000357	CAT	CDS	57108011	57108172	.	-	0	ID=Cattle_Y_C03828;Parent=Cattle_Y_T01834;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01834;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57109288	57109395	.	-	0	ID=Cattle_Y_C03829;Parent=Cattle_Y_T01834;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01834;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57115405	57115575	.	-	0	ID=Cattle_Y_C03830;Parent=Cattle_Y_T01834;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01834;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57118382	57118604	.	-	1	ID=Cattle_Y_C03831;Parent=Cattle_Y_T01834;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01834;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57119938	57120064	.	-	2	ID=Cattle_Y_C03832;Parent=Cattle_Y_T01834;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01834;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57120294	57120456	.	-	0	ID=Cattle_Y_C03833;Parent=Cattle_Y_T01834;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01834;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57123421	57123595	.	-	1	ID=Cattle_Y_C03834;Parent=Cattle_Y_T01834;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01834;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57125635	57125776	.	-	2	ID=Cattle_Y_C03835;Parent=Cattle_Y_T01834;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01834;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57131144	57131699	.	-	0	ID=Cattle_Y_C03836;Parent=Cattle_Y_T01834;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01834;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57105313	57131702	.	-	.	ID=Cattle_Y_T01835;Parent=Cattle_Y_G01073;Dbxref=GeneID:505258,GenBank:XM_024988451.2,BGD:BT29521,VGNC:VGNC:29729;Name=XM_024988451.2;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;model_evidence=Supporting evidence includes similarity to: 18 ESTs%2C 7 Proteins%2C 10 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=glycogenin 2%2C transcript variant X4;transcript_id=Cattle_Y_T01835;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_024988451.2
haplotype2-0000357	CAT	exon	57105313	57108172	.	-	.	ID=Cattle_Y_E04385;Parent=Cattle_Y_T01835;Dbxref=GeneID:505258,GenBank:XM_024988451.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X4;transcript_id=Cattle_Y_T01835;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988451.2-9
haplotype2-0000357	CAT	exon	57110895	57110999	.	-	.	ID=Cattle_Y_E04386;Parent=Cattle_Y_T01835;Dbxref=GeneID:505258,GenBank:XM_024988451.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X4;transcript_id=Cattle_Y_T01835;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988451.2-9
haplotype2-0000357	CAT	exon	57115405	57115575	.	-	.	ID=Cattle_Y_E04387;Parent=Cattle_Y_T01835;Dbxref=GeneID:505258,GenBank:XM_024988451.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X4;transcript_id=Cattle_Y_T01835;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988451.2-9
haplotype2-0000357	CAT	exon	57118382	57118604	.	-	.	ID=Cattle_Y_E04388;Parent=Cattle_Y_T01835;Dbxref=GeneID:505258,GenBank:XM_024988451.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X4;transcript_id=Cattle_Y_T01835;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988451.2-9
haplotype2-0000357	CAT	exon	57119938	57120064	.	-	.	ID=Cattle_Y_E04389;Parent=Cattle_Y_T01835;Dbxref=GeneID:505258,GenBank:XM_024988451.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X4;transcript_id=Cattle_Y_T01835;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988451.2-9
haplotype2-0000357	CAT	exon	57120294	57120456	.	-	.	ID=Cattle_Y_E04390;Parent=Cattle_Y_T01835;Dbxref=GeneID:505258,GenBank:XM_024988451.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X4;transcript_id=Cattle_Y_T01835;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988451.2-9
haplotype2-0000357	CAT	exon	57123421	57123595	.	-	.	ID=Cattle_Y_E04391;Parent=Cattle_Y_T01835;Dbxref=GeneID:505258,GenBank:XM_024988451.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X4;transcript_id=Cattle_Y_T01835;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988451.2-9
haplotype2-0000357	CAT	exon	57125635	57125776	.	-	.	ID=Cattle_Y_E04392;Parent=Cattle_Y_T01835;Dbxref=GeneID:505258,GenBank:XM_024988451.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X4;transcript_id=Cattle_Y_T01835;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988451.2-9
haplotype2-0000357	CAT	exon	57131144	57131702	.	-	.	ID=Cattle_Y_E04393;Parent=Cattle_Y_T01835;Dbxref=GeneID:505258,GenBank:XM_024988451.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X4;transcript_id=Cattle_Y_T01835;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988451.2-1
haplotype2-0000357	CAT	CDS	57108011	57108172	.	-	0	ID=Cattle_Y_C03837;Parent=Cattle_Y_T01835;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01835;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57110895	57110999	.	-	0	ID=Cattle_Y_C03838;Parent=Cattle_Y_T01835;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01835;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57115405	57115575	.	-	0	ID=Cattle_Y_C03839;Parent=Cattle_Y_T01835;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01835;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57118382	57118604	.	-	1	ID=Cattle_Y_C03840;Parent=Cattle_Y_T01835;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01835;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57119938	57120064	.	-	2	ID=Cattle_Y_C03841;Parent=Cattle_Y_T01835;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01835;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57120294	57120456	.	-	0	ID=Cattle_Y_C03842;Parent=Cattle_Y_T01835;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01835;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57123421	57123595	.	-	1	ID=Cattle_Y_C03843;Parent=Cattle_Y_T01835;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01835;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57125635	57125776	.	-	2	ID=Cattle_Y_C03844;Parent=Cattle_Y_T01835;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01835;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57131144	57131699	.	-	0	ID=Cattle_Y_C03845;Parent=Cattle_Y_T01835;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01835;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57105313	57131702	.	-	.	ID=Cattle_Y_T01836;Parent=Cattle_Y_G01073;Dbxref=GeneID:505258,GenBank:XM_024988452.2,BGD:BT29521,VGNC:VGNC:29729;Name=XM_024988452.2;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;model_evidence=Supporting evidence includes similarity to: 18 ESTs%2C 7 Proteins%2C 10 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 13 samples with support for all annotated introns;product=glycogenin 2%2C transcript variant X6;transcript_id=Cattle_Y_T01836;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_024988452.2
haplotype2-0000357	CAT	exon	57105313	57108172	.	-	.	ID=Cattle_Y_E04394;Parent=Cattle_Y_T01836;Dbxref=GeneID:505258,GenBank:XM_024988452.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X6;transcript_id=Cattle_Y_T01836;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988452.2-8
haplotype2-0000357	CAT	exon	57115405	57115575	.	-	.	ID=Cattle_Y_E04395;Parent=Cattle_Y_T01836;Dbxref=GeneID:505258,GenBank:XM_024988452.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X6;transcript_id=Cattle_Y_T01836;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988452.2-8
haplotype2-0000357	CAT	exon	57118382	57118604	.	-	.	ID=Cattle_Y_E04396;Parent=Cattle_Y_T01836;Dbxref=GeneID:505258,GenBank:XM_024988452.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X6;transcript_id=Cattle_Y_T01836;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988452.2-8
haplotype2-0000357	CAT	exon	57119938	57120064	.	-	.	ID=Cattle_Y_E04397;Parent=Cattle_Y_T01836;Dbxref=GeneID:505258,GenBank:XM_024988452.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X6;transcript_id=Cattle_Y_T01836;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988452.2-8
haplotype2-0000357	CAT	exon	57120294	57120456	.	-	.	ID=Cattle_Y_E04398;Parent=Cattle_Y_T01836;Dbxref=GeneID:505258,GenBank:XM_024988452.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X6;transcript_id=Cattle_Y_T01836;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988452.2-8
haplotype2-0000357	CAT	exon	57123421	57123595	.	-	.	ID=Cattle_Y_E04399;Parent=Cattle_Y_T01836;Dbxref=GeneID:505258,GenBank:XM_024988452.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X6;transcript_id=Cattle_Y_T01836;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988452.2-8
haplotype2-0000357	CAT	exon	57125635	57125776	.	-	.	ID=Cattle_Y_E04400;Parent=Cattle_Y_T01836;Dbxref=GeneID:505258,GenBank:XM_024988452.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X6;transcript_id=Cattle_Y_T01836;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988452.2-8
haplotype2-0000357	CAT	exon	57131144	57131702	.	-	.	ID=Cattle_Y_E04401;Parent=Cattle_Y_T01836;Dbxref=GeneID:505258,GenBank:XM_024988452.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X6;transcript_id=Cattle_Y_T01836;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988452.2-1
haplotype2-0000357	CAT	CDS	57108011	57108172	.	-	0	ID=Cattle_Y_C03846;Parent=Cattle_Y_T01836;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01836;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57115405	57115575	.	-	0	ID=Cattle_Y_C03847;Parent=Cattle_Y_T01836;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01836;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57118382	57118604	.	-	1	ID=Cattle_Y_C03848;Parent=Cattle_Y_T01836;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01836;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57119938	57120064	.	-	2	ID=Cattle_Y_C03849;Parent=Cattle_Y_T01836;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01836;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57120294	57120456	.	-	0	ID=Cattle_Y_C03850;Parent=Cattle_Y_T01836;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01836;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57123421	57123595	.	-	1	ID=Cattle_Y_C03851;Parent=Cattle_Y_T01836;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01836;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57125635	57125776	.	-	2	ID=Cattle_Y_C03852;Parent=Cattle_Y_T01836;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01836;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57131144	57131699	.	-	0	ID=Cattle_Y_C03853;Parent=Cattle_Y_T01836;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01836;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57105313	57130956	.	-	.	ID=Cattle_Y_T01837;Parent=Cattle_Y_G01073;Dbxref=GeneID:505258,GenBank:XM_024988453.2,BGD:BT29521,VGNC:VGNC:29729;Name=XM_024988453.2;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;model_evidence=Supporting evidence includes similarity to: 20 ESTs%2C 15 Proteins%2C 12 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 12 samples with support for all annotated introns;product=glycogenin 2%2C transcript variant X7;transcript_id=Cattle_Y_T01837;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_024988453.2
haplotype2-0000357	CAT	exon	57105313	57108172	.	-	.	ID=Cattle_Y_E04402;Parent=Cattle_Y_T01837;Dbxref=GeneID:505258,GenBank:XM_024988453.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X7;transcript_id=Cattle_Y_T01837;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988453.2-11
haplotype2-0000357	CAT	exon	57109288	57109395	.	-	.	ID=Cattle_Y_E04403;Parent=Cattle_Y_T01837;Dbxref=GeneID:505258,GenBank:XM_024988453.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X7;transcript_id=Cattle_Y_T01837;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988453.2-11
haplotype2-0000357	CAT	exon	57110895	57110999	.	-	.	ID=Cattle_Y_E04404;Parent=Cattle_Y_T01837;Dbxref=GeneID:505258,GenBank:XM_024988453.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X7;transcript_id=Cattle_Y_T01837;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988453.2-11
haplotype2-0000357	CAT	exon	57115405	57115575	.	-	.	ID=Cattle_Y_E04405;Parent=Cattle_Y_T01837;Dbxref=GeneID:505258,GenBank:XM_024988453.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X7;transcript_id=Cattle_Y_T01837;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988453.2-11
haplotype2-0000357	CAT	exon	57118382	57118604	.	-	.	ID=Cattle_Y_E04406;Parent=Cattle_Y_T01837;Dbxref=GeneID:505258,GenBank:XM_024988453.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X7;transcript_id=Cattle_Y_T01837;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988453.2-11
haplotype2-0000357	CAT	exon	57119938	57120064	.	-	.	ID=Cattle_Y_E04407;Parent=Cattle_Y_T01837;Dbxref=GeneID:505258,GenBank:XM_024988453.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X7;transcript_id=Cattle_Y_T01837;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988453.2-11
haplotype2-0000357	CAT	exon	57120294	57120456	.	-	.	ID=Cattle_Y_E04408;Parent=Cattle_Y_T01837;Dbxref=GeneID:505258,GenBank:XM_024988453.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X7;transcript_id=Cattle_Y_T01837;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988453.2-11
haplotype2-0000357	CAT	exon	57123421	57123595	.	-	.	ID=Cattle_Y_E04409;Parent=Cattle_Y_T01837;Dbxref=GeneID:505258,GenBank:XM_024988453.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X7;transcript_id=Cattle_Y_T01837;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988453.2-11
haplotype2-0000357	CAT	exon	57125635	57125776	.	-	.	ID=Cattle_Y_E04410;Parent=Cattle_Y_T01837;Dbxref=GeneID:505258,GenBank:XM_024988453.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X7;transcript_id=Cattle_Y_T01837;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988453.2-11
haplotype2-0000357	CAT	exon	57130439	57130589	.	-	.	ID=Cattle_Y_E04411;Parent=Cattle_Y_T01837;Dbxref=GeneID:505258,GenBank:XM_024988453.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X7;transcript_id=Cattle_Y_T01837;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988453.2-11
haplotype2-0000357	CAT	exon	57130779	57130956	.	-	.	ID=Cattle_Y_E04412;Parent=Cattle_Y_T01837;Dbxref=GeneID:505258,GenBank:XM_024988453.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X7;transcript_id=Cattle_Y_T01837;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988453.2-1
haplotype2-0000357	CAT	CDS	57108011	57108172	.	-	0	ID=Cattle_Y_C03854;Parent=Cattle_Y_T01837;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01837;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57109288	57109395	.	-	0	ID=Cattle_Y_C03855;Parent=Cattle_Y_T01837;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01837;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57110895	57110999	.	-	0	ID=Cattle_Y_C03856;Parent=Cattle_Y_T01837;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01837;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57115405	57115575	.	-	0	ID=Cattle_Y_C03857;Parent=Cattle_Y_T01837;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01837;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57118382	57118604	.	-	1	ID=Cattle_Y_C03858;Parent=Cattle_Y_T01837;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01837;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57119938	57120064	.	-	2	ID=Cattle_Y_C03859;Parent=Cattle_Y_T01837;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01837;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57120294	57120456	.	-	0	ID=Cattle_Y_C03860;Parent=Cattle_Y_T01837;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01837;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57123421	57123595	.	-	1	ID=Cattle_Y_C03861;Parent=Cattle_Y_T01837;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01837;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57125635	57125776	.	-	2	ID=Cattle_Y_C03862;Parent=Cattle_Y_T01837;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01837;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57130439	57130589	.	-	0	ID=Cattle_Y_C03863;Parent=Cattle_Y_T01837;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01837;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57130779	57130784	.	-	0	ID=Cattle_Y_C03864;Parent=Cattle_Y_T01837;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01837;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57105313	57131176	.	-	.	ID=Cattle_Y_T01838;Parent=Cattle_Y_G01073;Dbxref=GeneID:505258,GenBank:XM_024988455.2,BGD:BT29521,VGNC:VGNC:29729;Name=XM_024988455.2;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;model_evidence=Supporting evidence includes similarity to: 19 ESTs%2C 15 Proteins%2C 12 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 5 samples with support for all annotated introns;product=glycogenin 2%2C transcript variant X10;transcript_id=Cattle_Y_T01838;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_024988455.2
haplotype2-0000357	CAT	exon	57105313	57108172	.	-	.	ID=Cattle_Y_E04413;Parent=Cattle_Y_T01838;Dbxref=GeneID:505258,GenBank:XM_024988455.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X10;transcript_id=Cattle_Y_T01838;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988455.2-11
haplotype2-0000357	CAT	exon	57109288	57109395	.	-	.	ID=Cattle_Y_E04414;Parent=Cattle_Y_T01838;Dbxref=GeneID:505258,GenBank:XM_024988455.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X10;transcript_id=Cattle_Y_T01838;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988455.2-11
haplotype2-0000357	CAT	exon	57110895	57110999	.	-	.	ID=Cattle_Y_E04415;Parent=Cattle_Y_T01838;Dbxref=GeneID:505258,GenBank:XM_024988455.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X10;transcript_id=Cattle_Y_T01838;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988455.2-11
haplotype2-0000357	CAT	exon	57115405	57115575	.	-	.	ID=Cattle_Y_E04416;Parent=Cattle_Y_T01838;Dbxref=GeneID:505258,GenBank:XM_024988455.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X10;transcript_id=Cattle_Y_T01838;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988455.2-11
haplotype2-0000357	CAT	exon	57118382	57118604	.	-	.	ID=Cattle_Y_E04417;Parent=Cattle_Y_T01838;Dbxref=GeneID:505258,GenBank:XM_024988455.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X10;transcript_id=Cattle_Y_T01838;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988455.2-11
haplotype2-0000357	CAT	exon	57119938	57120064	.	-	.	ID=Cattle_Y_E04418;Parent=Cattle_Y_T01838;Dbxref=GeneID:505258,GenBank:XM_024988455.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X10;transcript_id=Cattle_Y_T01838;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988455.2-11
haplotype2-0000357	CAT	exon	57120294	57120456	.	-	.	ID=Cattle_Y_E04419;Parent=Cattle_Y_T01838;Dbxref=GeneID:505258,GenBank:XM_024988455.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X10;transcript_id=Cattle_Y_T01838;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988455.2-11
haplotype2-0000357	CAT	exon	57123421	57123595	.	-	.	ID=Cattle_Y_E04420;Parent=Cattle_Y_T01838;Dbxref=GeneID:505258,GenBank:XM_024988455.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X10;transcript_id=Cattle_Y_T01838;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988455.2-11
haplotype2-0000357	CAT	exon	57125635	57125776	.	-	.	ID=Cattle_Y_E04421;Parent=Cattle_Y_T01838;Dbxref=GeneID:505258,GenBank:XM_024988455.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X10;transcript_id=Cattle_Y_T01838;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988455.2-11
haplotype2-0000357	CAT	exon	57130439	57130589	.	-	.	ID=Cattle_Y_E04422;Parent=Cattle_Y_T01838;Dbxref=GeneID:505258,GenBank:XM_024988455.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X10;transcript_id=Cattle_Y_T01838;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988455.2-2
haplotype2-0000357	CAT	exon	57131002	57131176	.	-	.	ID=Cattle_Y_E04423;Parent=Cattle_Y_T01838;Dbxref=GeneID:505258,GenBank:XM_024988455.2,BGD:BT29521,VGNC:VGNC:29729;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=GYG2;product=glycogenin 2, transcript variant X10;transcript_id=Cattle_Y_T01838;gene_id=Cattle_Y_G01073;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024988455.2-1
haplotype2-0000357	CAT	CDS	57108011	57108172	.	-	0	ID=Cattle_Y_C03865;Parent=Cattle_Y_T01838;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01838;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57109288	57109395	.	-	0	ID=Cattle_Y_C03866;Parent=Cattle_Y_T01838;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01838;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57110895	57110999	.	-	0	ID=Cattle_Y_C03867;Parent=Cattle_Y_T01838;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01838;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57115405	57115575	.	-	0	ID=Cattle_Y_C03868;Parent=Cattle_Y_T01838;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01838;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57118382	57118604	.	-	1	ID=Cattle_Y_C03869;Parent=Cattle_Y_T01838;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01838;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57119938	57120064	.	-	2	ID=Cattle_Y_C03870;Parent=Cattle_Y_T01838;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01838;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57120294	57120456	.	-	0	ID=Cattle_Y_C03871;Parent=Cattle_Y_T01838;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01838;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57123421	57123595	.	-	1	ID=Cattle_Y_C03872;Parent=Cattle_Y_T01838;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01838;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57125635	57125776	.	-	2	ID=Cattle_Y_C03873;Parent=Cattle_Y_T01838;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01838;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57130439	57130445	.	-	0	ID=Cattle_Y_C03874;Parent=Cattle_Y_T01838;gene_id=Cattle_Y_G01073;transcript_id=Cattle_Y_T01838;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	57136332	57168961	.	-	.	ID=Cattle_Y_G01074;Dbxref=GeneID:101902671,VGNC:VGNC:56960;Name=XG;description=Xg glycoprotein;gbkey=Gene;gene=XG;gene_biotype=protein_coding;gene_id=Cattle_Y_G01074;source_id=gene-XG-2
haplotype2-0000357	CAT	mRNA	57136332	57168961	.	-	.	ID=Cattle_Y_T01839;Parent=Cattle_Y_G01074;Dbxref=GeneID:101902671,GenBank:XM_059884021.1,VGNC:VGNC:56960;Name=XM_059884021.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;model_evidence=Supporting evidence includes similarity to: 1 EST%2C 13 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 51 samples with support for all annotated introns;product=Xg glycoprotein%2C transcript variant X1;transcript_id=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884021.1
haplotype2-0000357	CAT	exon	57136332	57141231	.	-	.	ID=Cattle_Y_E04424;Parent=Cattle_Y_T01839;Dbxref=GeneID:101902671,GenBank:XM_059884021.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X1;transcript_id=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884021.1-15
haplotype2-0000357	CAT	exon	57142403	57142513	.	-	.	ID=Cattle_Y_E04425;Parent=Cattle_Y_T01839;Dbxref=GeneID:101902671,GenBank:XM_059884021.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X1;transcript_id=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884021.1-15
haplotype2-0000357	CAT	exon	57144760	57144795	.	-	.	ID=Cattle_Y_E04426;Parent=Cattle_Y_T01839;Dbxref=GeneID:101902671,GenBank:XM_059884021.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X1;transcript_id=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884021.1-15
haplotype2-0000357	CAT	exon	57147170	57147214	.	-	.	ID=Cattle_Y_E04427;Parent=Cattle_Y_T01839;Dbxref=GeneID:101902671,GenBank:XM_059884021.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X1;transcript_id=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884021.1-15
haplotype2-0000357	CAT	exon	57148500	57148541	.	-	.	ID=Cattle_Y_E04428;Parent=Cattle_Y_T01839;Dbxref=GeneID:101902671,GenBank:XM_059884021.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X1;transcript_id=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884021.1-15
haplotype2-0000357	CAT	exon	57150716	57150760	.	-	.	ID=Cattle_Y_E04429;Parent=Cattle_Y_T01839;Dbxref=GeneID:101902671,GenBank:XM_059884021.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X1;transcript_id=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884021.1-15
haplotype2-0000357	CAT	exon	57152060	57152101	.	-	.	ID=Cattle_Y_E04430;Parent=Cattle_Y_T01839;Dbxref=GeneID:101902671,GenBank:XM_059884021.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X1;transcript_id=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884021.1-15
haplotype2-0000357	CAT	exon	57154277	57154321	.	-	.	ID=Cattle_Y_E04431;Parent=Cattle_Y_T01839;Dbxref=GeneID:101902671,GenBank:XM_059884021.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X1;transcript_id=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884021.1-15
haplotype2-0000357	CAT	exon	57155610	57155651	.	-	.	ID=Cattle_Y_E04432;Parent=Cattle_Y_T01839;Dbxref=GeneID:101902671,GenBank:XM_059884021.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X1;transcript_id=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884021.1-15
haplotype2-0000357	CAT	exon	57157642	57157701	.	-	.	ID=Cattle_Y_E04433;Parent=Cattle_Y_T01839;Dbxref=GeneID:101902671,GenBank:XM_059884021.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X1;transcript_id=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884021.1-15
haplotype2-0000357	CAT	exon	57158043	57158099	.	-	.	ID=Cattle_Y_E04434;Parent=Cattle_Y_T01839;Dbxref=GeneID:101902671,GenBank:XM_059884021.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X1;transcript_id=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884021.1-15
haplotype2-0000357	CAT	exon	57159686	57159748	.	-	.	ID=Cattle_Y_E04435;Parent=Cattle_Y_T01839;Dbxref=GeneID:101902671,GenBank:XM_059884021.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X1;transcript_id=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884021.1-15
haplotype2-0000357	CAT	exon	57160731	57160754	.	-	.	ID=Cattle_Y_E04436;Parent=Cattle_Y_T01839;Dbxref=GeneID:101902671,GenBank:XM_059884021.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X1;transcript_id=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884021.1-15
haplotype2-0000357	CAT	exon	57161144	57161188	.	-	.	ID=Cattle_Y_E04437;Parent=Cattle_Y_T01839;Dbxref=GeneID:101902671,GenBank:XM_059884021.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X1;transcript_id=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884021.1-15
haplotype2-0000357	CAT	exon	57168745	57168961	.	-	.	ID=Cattle_Y_E04438;Parent=Cattle_Y_T01839;Dbxref=GeneID:101902671,GenBank:XM_059884021.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X1;transcript_id=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884021.1-1
haplotype2-0000357	CAT	CDS	57141215	57141231	.	-	2	ID=Cattle_Y_C03875;Parent=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01839;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57142403	57142513	.	-	2	ID=Cattle_Y_C03876;Parent=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01839;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57144760	57144795	.	-	2	ID=Cattle_Y_C03877;Parent=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01839;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57147170	57147214	.	-	2	ID=Cattle_Y_C03878;Parent=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01839;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57148500	57148541	.	-	2	ID=Cattle_Y_C03879;Parent=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01839;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57150716	57150760	.	-	2	ID=Cattle_Y_C03880;Parent=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01839;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57152060	57152101	.	-	2	ID=Cattle_Y_C03881;Parent=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01839;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57154277	57154321	.	-	2	ID=Cattle_Y_C03882;Parent=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01839;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57155610	57155651	.	-	2	ID=Cattle_Y_C03883;Parent=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01839;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57157642	57157701	.	-	2	ID=Cattle_Y_C03884;Parent=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01839;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57158043	57158099	.	-	2	ID=Cattle_Y_C03885;Parent=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01839;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57159686	57159748	.	-	2	ID=Cattle_Y_C03886;Parent=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01839;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57160731	57160754	.	-	2	ID=Cattle_Y_C03887;Parent=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01839;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57161144	57161188	.	-	2	ID=Cattle_Y_C03888;Parent=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01839;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57168745	57168805	.	-	0	ID=Cattle_Y_C03889;Parent=Cattle_Y_T01839;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01839;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57136332	57168961	.	-	.	ID=Cattle_Y_T01840;Parent=Cattle_Y_G01074;Dbxref=GeneID:101902671,GenBank:XM_059884022.1,VGNC:VGNC:56960;Name=XM_059884022.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;model_evidence=Supporting evidence includes similarity to: 12 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 9 samples with support for all annotated introns;product=Xg glycoprotein%2C transcript variant X2;transcript_id=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884022.1
haplotype2-0000357	CAT	exon	57136332	57141231	.	-	.	ID=Cattle_Y_E04439;Parent=Cattle_Y_T01840;Dbxref=GeneID:101902671,GenBank:XM_059884022.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X2;transcript_id=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884022.1-14
haplotype2-0000357	CAT	exon	57142403	57142513	.	-	.	ID=Cattle_Y_E04440;Parent=Cattle_Y_T01840;Dbxref=GeneID:101902671,GenBank:XM_059884022.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X2;transcript_id=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884022.1-14
haplotype2-0000357	CAT	exon	57144760	57144795	.	-	.	ID=Cattle_Y_E04441;Parent=Cattle_Y_T01840;Dbxref=GeneID:101902671,GenBank:XM_059884022.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X2;transcript_id=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884022.1-14
haplotype2-0000357	CAT	exon	57148500	57148541	.	-	.	ID=Cattle_Y_E04442;Parent=Cattle_Y_T01840;Dbxref=GeneID:101902671,GenBank:XM_059884022.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X2;transcript_id=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884022.1-14
haplotype2-0000357	CAT	exon	57150716	57150760	.	-	.	ID=Cattle_Y_E04443;Parent=Cattle_Y_T01840;Dbxref=GeneID:101902671,GenBank:XM_059884022.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X2;transcript_id=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884022.1-14
haplotype2-0000357	CAT	exon	57152060	57152101	.	-	.	ID=Cattle_Y_E04444;Parent=Cattle_Y_T01840;Dbxref=GeneID:101902671,GenBank:XM_059884022.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X2;transcript_id=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884022.1-14
haplotype2-0000357	CAT	exon	57154277	57154321	.	-	.	ID=Cattle_Y_E04445;Parent=Cattle_Y_T01840;Dbxref=GeneID:101902671,GenBank:XM_059884022.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X2;transcript_id=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884022.1-14
haplotype2-0000357	CAT	exon	57155610	57155651	.	-	.	ID=Cattle_Y_E04446;Parent=Cattle_Y_T01840;Dbxref=GeneID:101902671,GenBank:XM_059884022.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X2;transcript_id=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884022.1-14
haplotype2-0000357	CAT	exon	57157642	57157701	.	-	.	ID=Cattle_Y_E04447;Parent=Cattle_Y_T01840;Dbxref=GeneID:101902671,GenBank:XM_059884022.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X2;transcript_id=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884022.1-14
haplotype2-0000357	CAT	exon	57158043	57158099	.	-	.	ID=Cattle_Y_E04448;Parent=Cattle_Y_T01840;Dbxref=GeneID:101902671,GenBank:XM_059884022.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X2;transcript_id=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884022.1-14
haplotype2-0000357	CAT	exon	57159686	57159748	.	-	.	ID=Cattle_Y_E04449;Parent=Cattle_Y_T01840;Dbxref=GeneID:101902671,GenBank:XM_059884022.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X2;transcript_id=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884022.1-14
haplotype2-0000357	CAT	exon	57160731	57160754	.	-	.	ID=Cattle_Y_E04450;Parent=Cattle_Y_T01840;Dbxref=GeneID:101902671,GenBank:XM_059884022.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X2;transcript_id=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884022.1-14
haplotype2-0000357	CAT	exon	57161144	57161188	.	-	.	ID=Cattle_Y_E04451;Parent=Cattle_Y_T01840;Dbxref=GeneID:101902671,GenBank:XM_059884022.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X2;transcript_id=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884022.1-14
haplotype2-0000357	CAT	exon	57168745	57168961	.	-	.	ID=Cattle_Y_E04452;Parent=Cattle_Y_T01840;Dbxref=GeneID:101902671,GenBank:XM_059884022.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X2;transcript_id=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884022.1-1
haplotype2-0000357	CAT	CDS	57141215	57141231	.	-	2	ID=Cattle_Y_C03890;Parent=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01840;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57142403	57142513	.	-	2	ID=Cattle_Y_C03891;Parent=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01840;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57144760	57144795	.	-	2	ID=Cattle_Y_C03892;Parent=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01840;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57148500	57148541	.	-	2	ID=Cattle_Y_C03893;Parent=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01840;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57150716	57150760	.	-	2	ID=Cattle_Y_C03894;Parent=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01840;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57152060	57152101	.	-	2	ID=Cattle_Y_C03895;Parent=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01840;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57154277	57154321	.	-	2	ID=Cattle_Y_C03896;Parent=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01840;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57155610	57155651	.	-	2	ID=Cattle_Y_C03897;Parent=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01840;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57157642	57157701	.	-	2	ID=Cattle_Y_C03898;Parent=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01840;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57158043	57158099	.	-	2	ID=Cattle_Y_C03899;Parent=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01840;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57159686	57159748	.	-	2	ID=Cattle_Y_C03900;Parent=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01840;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57160731	57160754	.	-	2	ID=Cattle_Y_C03901;Parent=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01840;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57161144	57161188	.	-	2	ID=Cattle_Y_C03902;Parent=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01840;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57168745	57168805	.	-	0	ID=Cattle_Y_C03903;Parent=Cattle_Y_T01840;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01840;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57136332	57168961	.	-	.	ID=Cattle_Y_T01841;Parent=Cattle_Y_G01074;Dbxref=GeneID:101902671,GenBank:XM_059884023.1,VGNC:VGNC:56960;Name=XM_059884023.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;model_evidence=Supporting evidence includes similarity to: 13 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 16 samples with support for all annotated introns;product=Xg glycoprotein%2C transcript variant X3;transcript_id=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884023.1
haplotype2-0000357	CAT	exon	57136332	57141231	.	-	.	ID=Cattle_Y_E04453;Parent=Cattle_Y_T01841;Dbxref=GeneID:101902671,GenBank:XM_059884023.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X3;transcript_id=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884023.1-14
haplotype2-0000357	CAT	exon	57142403	57142513	.	-	.	ID=Cattle_Y_E04454;Parent=Cattle_Y_T01841;Dbxref=GeneID:101902671,GenBank:XM_059884023.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X3;transcript_id=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884023.1-14
haplotype2-0000357	CAT	exon	57144760	57144795	.	-	.	ID=Cattle_Y_E04455;Parent=Cattle_Y_T01841;Dbxref=GeneID:101902671,GenBank:XM_059884023.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X3;transcript_id=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884023.1-14
haplotype2-0000357	CAT	exon	57147170	57147214	.	-	.	ID=Cattle_Y_E04456;Parent=Cattle_Y_T01841;Dbxref=GeneID:101902671,GenBank:XM_059884023.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X3;transcript_id=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884023.1-14
haplotype2-0000357	CAT	exon	57148500	57148541	.	-	.	ID=Cattle_Y_E04457;Parent=Cattle_Y_T01841;Dbxref=GeneID:101902671,GenBank:XM_059884023.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X3;transcript_id=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884023.1-14
haplotype2-0000357	CAT	exon	57150716	57150760	.	-	.	ID=Cattle_Y_E04458;Parent=Cattle_Y_T01841;Dbxref=GeneID:101902671,GenBank:XM_059884023.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X3;transcript_id=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884023.1-14
haplotype2-0000357	CAT	exon	57152060	57152101	.	-	.	ID=Cattle_Y_E04459;Parent=Cattle_Y_T01841;Dbxref=GeneID:101902671,GenBank:XM_059884023.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X3;transcript_id=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884023.1-14
haplotype2-0000357	CAT	exon	57154277	57154321	.	-	.	ID=Cattle_Y_E04460;Parent=Cattle_Y_T01841;Dbxref=GeneID:101902671,GenBank:XM_059884023.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X3;transcript_id=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884023.1-14
haplotype2-0000357	CAT	exon	57155610	57155651	.	-	.	ID=Cattle_Y_E04461;Parent=Cattle_Y_T01841;Dbxref=GeneID:101902671,GenBank:XM_059884023.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X3;transcript_id=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884023.1-14
haplotype2-0000357	CAT	exon	57157642	57157701	.	-	.	ID=Cattle_Y_E04462;Parent=Cattle_Y_T01841;Dbxref=GeneID:101902671,GenBank:XM_059884023.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X3;transcript_id=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884023.1-14
haplotype2-0000357	CAT	exon	57158043	57158099	.	-	.	ID=Cattle_Y_E04463;Parent=Cattle_Y_T01841;Dbxref=GeneID:101902671,GenBank:XM_059884023.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X3;transcript_id=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884023.1-14
haplotype2-0000357	CAT	exon	57159686	57159748	.	-	.	ID=Cattle_Y_E04464;Parent=Cattle_Y_T01841;Dbxref=GeneID:101902671,GenBank:XM_059884023.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X3;transcript_id=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884023.1-14
haplotype2-0000357	CAT	exon	57160731	57160754	.	-	.	ID=Cattle_Y_E04465;Parent=Cattle_Y_T01841;Dbxref=GeneID:101902671,GenBank:XM_059884023.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X3;transcript_id=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884023.1-14
haplotype2-0000357	CAT	exon	57168745	57168961	.	-	.	ID=Cattle_Y_E04466;Parent=Cattle_Y_T01841;Dbxref=GeneID:101902671,GenBank:XM_059884023.1,VGNC:VGNC:56960;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=XG;product=Xg glycoprotein, transcript variant X3;transcript_id=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884023.1-1
haplotype2-0000357	CAT	CDS	57141215	57141231	.	-	2	ID=Cattle_Y_C03904;Parent=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01841;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57142403	57142513	.	-	2	ID=Cattle_Y_C03905;Parent=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01841;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57144760	57144795	.	-	2	ID=Cattle_Y_C03906;Parent=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01841;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57147170	57147214	.	-	2	ID=Cattle_Y_C03907;Parent=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01841;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57148500	57148541	.	-	2	ID=Cattle_Y_C03908;Parent=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01841;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57150716	57150760	.	-	2	ID=Cattle_Y_C03909;Parent=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01841;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57152060	57152101	.	-	2	ID=Cattle_Y_C03910;Parent=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01841;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57154277	57154321	.	-	2	ID=Cattle_Y_C03911;Parent=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01841;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57155610	57155651	.	-	2	ID=Cattle_Y_C03912;Parent=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01841;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57157642	57157701	.	-	2	ID=Cattle_Y_C03913;Parent=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01841;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57158043	57158099	.	-	2	ID=Cattle_Y_C03914;Parent=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01841;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57159686	57159748	.	-	2	ID=Cattle_Y_C03915;Parent=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01841;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57160731	57160754	.	-	2	ID=Cattle_Y_C03916;Parent=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01841;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57168745	57168805	.	-	0	ID=Cattle_Y_C03917;Parent=Cattle_Y_T01841;gene_id=Cattle_Y_G01074;transcript_id=Cattle_Y_T01841;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	57171852	57202044	.	-	.	ID=Cattle_Y_G01075;Dbxref=BGD:BT26573,GeneID:509230,VGNC:VGNC:50554;Name=CD99;description=CD99 molecule;gbkey=Gene;gene=CD99;gene_biotype=protein_coding;gene_id=Cattle_Y_G01075;source_id=gene-CD99-2
haplotype2-0000357	CAT	mRNA	57171852	57202044	.	-	.	ID=Cattle_Y_T01842;Parent=Cattle_Y_G01075;Dbxref=GeneID:509230,GenBank:NM_001244214.1,BGD:BT26573,VGNC:VGNC:50554;Name=NM_001244214.1;Note=The RefSeq transcript has 58 substitutions%2C 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=CD99;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001244214.1;product=CD99 molecule;transcript_id=Cattle_Y_T01842;gene_id=Cattle_Y_G01075;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001244214.1-2
haplotype2-0000357	CAT	exon	57171852	57175224	.	-	.	ID=Cattle_Y_E04467;Parent=Cattle_Y_T01842;Dbxref=GeneID:509230,GenBank:NM_001244214.1,BGD:BT26573,VGNC:VGNC:50554;Note=The RefSeq transcript has 58 substitutions, 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=CD99;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244214.1;product=CD99 molecule;transcript_id=Cattle_Y_T01842;gene_id=Cattle_Y_G01075;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244214.1-2-10
haplotype2-0000357	CAT	exon	57175417	57175470	.	-	.	ID=Cattle_Y_E04468;Parent=Cattle_Y_T01842;Dbxref=GeneID:509230,GenBank:NM_001244214.1,BGD:BT26573,VGNC:VGNC:50554;Note=The RefSeq transcript has 58 substitutions, 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=CD99;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244214.1;product=CD99 molecule;transcript_id=Cattle_Y_T01842;gene_id=Cattle_Y_G01075;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244214.1-2-9
haplotype2-0000357	CAT	exon	57180777	57180890	.	-	.	ID=Cattle_Y_E04469;Parent=Cattle_Y_T01842;Dbxref=GeneID:509230,GenBank:NM_001244214.1,BGD:BT26573,VGNC:VGNC:50554;Note=The RefSeq transcript has 58 substitutions, 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=CD99;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244214.1;product=CD99 molecule;transcript_id=Cattle_Y_T01842;gene_id=Cattle_Y_G01075;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244214.1-2-8
haplotype2-0000357	CAT	exon	57183422	57183490	.	-	.	ID=Cattle_Y_E04470;Parent=Cattle_Y_T01842;Dbxref=GeneID:509230,GenBank:NM_001244214.1,BGD:BT26573,VGNC:VGNC:50554;Note=The RefSeq transcript has 58 substitutions, 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=CD99;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244214.1;product=CD99 molecule;transcript_id=Cattle_Y_T01842;gene_id=Cattle_Y_G01075;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244214.1-2-7
haplotype2-0000357	CAT	exon	57184384	57184431	.	-	.	ID=Cattle_Y_E04471;Parent=Cattle_Y_T01842;Dbxref=GeneID:509230,GenBank:NM_001244214.1,BGD:BT26573,VGNC:VGNC:50554;Note=The RefSeq transcript has 58 substitutions, 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=CD99;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244214.1;product=CD99 molecule;transcript_id=Cattle_Y_T01842;gene_id=Cattle_Y_G01075;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244214.1-2-6
haplotype2-0000357	CAT	exon	57185792	57185857	.	-	.	ID=Cattle_Y_E04472;Parent=Cattle_Y_T01842;Dbxref=GeneID:509230,GenBank:NM_001244214.1,BGD:BT26573,VGNC:VGNC:50554;Note=The RefSeq transcript has 58 substitutions, 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=CD99;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244214.1;product=CD99 molecule;transcript_id=Cattle_Y_T01842;gene_id=Cattle_Y_G01075;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244214.1-2-5
haplotype2-0000357	CAT	exon	57186709	57186756	.	-	.	ID=Cattle_Y_E04473;Parent=Cattle_Y_T01842;Dbxref=GeneID:509230,GenBank:NM_001244214.1,BGD:BT26573,VGNC:VGNC:50554;Note=The RefSeq transcript has 58 substitutions, 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=CD99;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244214.1;product=CD99 molecule;transcript_id=Cattle_Y_T01842;gene_id=Cattle_Y_G01075;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244214.1-2-4
haplotype2-0000357	CAT	exon	57188458	57188496	.	-	.	ID=Cattle_Y_E04474;Parent=Cattle_Y_T01842;Dbxref=GeneID:509230,GenBank:NM_001244214.1,BGD:BT26573,VGNC:VGNC:50554;Note=The RefSeq transcript has 58 substitutions, 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=CD99;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244214.1;product=CD99 molecule;transcript_id=Cattle_Y_T01842;gene_id=Cattle_Y_G01075;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244214.1-2-3
haplotype2-0000357	CAT	exon	57190624	57190653	.	-	.	ID=Cattle_Y_E04475;Parent=Cattle_Y_T01842;Dbxref=GeneID:509230,GenBank:NM_001244214.1,BGD:BT26573,VGNC:VGNC:50554;Note=The RefSeq transcript has 58 substitutions, 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=CD99;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244214.1;product=CD99 molecule;transcript_id=Cattle_Y_T01842;gene_id=Cattle_Y_G01075;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244214.1-2-2
haplotype2-0000357	CAT	exon	57201899	57202044	.	-	.	ID=Cattle_Y_E04476;Parent=Cattle_Y_T01842;Dbxref=GeneID:509230,GenBank:NM_001244214.1,BGD:BT26573,VGNC:VGNC:50554;Note=The RefSeq transcript has 58 substitutions, 1 non-frameshifting indel compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=CD99;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001244214.1;product=CD99 molecule;transcript_id=Cattle_Y_T01842;gene_id=Cattle_Y_G01075;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001244214.1-2-1
haplotype2-0000357	CAT	CDS	57175199	57175224	.	-	2	ID=Cattle_Y_C03918;Parent=Cattle_Y_T01842;Dbxref=GeneID:509230,GenBank:NP_001231143.1,BGD:BT26573,VGNC:VGNC:50554;Name=NP_001231143.1;gbkey=CDS;gene=CD99;product=CD99 antigen precursor;protein_id=NP_001231143.1;gene_id=Cattle_Y_G01075;transcript_id=Cattle_Y_T01842;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57175417	57175470	.	-	2	ID=Cattle_Y_C03919;Parent=Cattle_Y_T01842;Dbxref=GeneID:509230,GenBank:NP_001231143.1,BGD:BT26573,VGNC:VGNC:50554;Name=NP_001231143.1;gbkey=CDS;gene=CD99;product=CD99 antigen precursor;protein_id=NP_001231143.1;gene_id=Cattle_Y_G01075;transcript_id=Cattle_Y_T01842;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57180777	57180890	.	-	2	ID=Cattle_Y_C03920;Parent=Cattle_Y_T01842;Dbxref=GeneID:509230,GenBank:NP_001231143.1,BGD:BT26573,VGNC:VGNC:50554;Name=NP_001231143.1;gbkey=CDS;gene=CD99;product=CD99 antigen precursor;protein_id=NP_001231143.1;gene_id=Cattle_Y_G01075;transcript_id=Cattle_Y_T01842;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57183422	57183490	.	-	2	ID=Cattle_Y_C03921;Parent=Cattle_Y_T01842;Dbxref=GeneID:509230,GenBank:NP_001231143.1,BGD:BT26573,VGNC:VGNC:50554;Name=NP_001231143.1;gbkey=CDS;gene=CD99;product=CD99 antigen precursor;protein_id=NP_001231143.1;gene_id=Cattle_Y_G01075;transcript_id=Cattle_Y_T01842;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57184384	57184431	.	-	2	ID=Cattle_Y_C03922;Parent=Cattle_Y_T01842;Dbxref=GeneID:509230,GenBank:NP_001231143.1,BGD:BT26573,VGNC:VGNC:50554;Name=NP_001231143.1;gbkey=CDS;gene=CD99;product=CD99 antigen precursor;protein_id=NP_001231143.1;gene_id=Cattle_Y_G01075;transcript_id=Cattle_Y_T01842;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57185792	57185857	.	-	2	ID=Cattle_Y_C03923;Parent=Cattle_Y_T01842;Dbxref=GeneID:509230,GenBank:NP_001231143.1,BGD:BT26573,VGNC:VGNC:50554;Name=NP_001231143.1;gbkey=CDS;gene=CD99;product=CD99 antigen precursor;protein_id=NP_001231143.1;gene_id=Cattle_Y_G01075;transcript_id=Cattle_Y_T01842;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57186709	57186756	.	-	2	ID=Cattle_Y_C03924;Parent=Cattle_Y_T01842;Dbxref=GeneID:509230,GenBank:NP_001231143.1,BGD:BT26573,VGNC:VGNC:50554;Name=NP_001231143.1;gbkey=CDS;gene=CD99;product=CD99 antigen precursor;protein_id=NP_001231143.1;gene_id=Cattle_Y_G01075;transcript_id=Cattle_Y_T01842;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57188458	57188496	.	-	2	ID=Cattle_Y_C03925;Parent=Cattle_Y_T01842;Dbxref=GeneID:509230,GenBank:NP_001231143.1,BGD:BT26573,VGNC:VGNC:50554;Name=NP_001231143.1;gbkey=CDS;gene=CD99;product=CD99 antigen precursor;protein_id=NP_001231143.1;gene_id=Cattle_Y_G01075;transcript_id=Cattle_Y_T01842;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57190624	57190653	.	-	2	ID=Cattle_Y_C03926;Parent=Cattle_Y_T01842;Dbxref=GeneID:509230,GenBank:NP_001231143.1,BGD:BT26573,VGNC:VGNC:50554;Name=NP_001231143.1;gbkey=CDS;gene=CD99;product=CD99 antigen precursor;protein_id=NP_001231143.1;gene_id=Cattle_Y_G01075;transcript_id=Cattle_Y_T01842;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57201899	57201965	.	-	0	ID=Cattle_Y_C03927;Parent=Cattle_Y_T01842;Dbxref=GeneID:509230,GenBank:NP_001231143.1,BGD:BT26573,VGNC:VGNC:50554;Name=NP_001231143.1;gbkey=CDS;gene=CD99;product=CD99 antigen precursor;protein_id=NP_001231143.1;gene_id=Cattle_Y_G01075;transcript_id=Cattle_Y_T01842;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	57201374	57218919	.	+	.	ID=Cattle_Y_G01076;Dbxref=GeneID:104970645;Name=LOC104970645;description=uncharacterized LOC104970645;gbkey=Gene;gene=LOC104970645;gene_biotype=lncRNA;gene_id=Cattle_Y_G01076;source_id=gene-LOC104970645-2
haplotype2-0000357	CAT	lnc_RNA	57201374	57218913	.	+	.	ID=Cattle_Y_T01843;Parent=Cattle_Y_G01076;Dbxref=GeneID:104970645,GenBank:XR_009493645.1;Name=XR_009493645.1;gbkey=ncRNA;gene=LOC104970645;model_evidence=Supporting evidence includes similarity to: 2 ESTs%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 13 samples with support for all annotated introns;product=uncharacterized lncRNA%2C transcript variant X1;transcript_id=Cattle_Y_T01843;gene_id=Cattle_Y_G01076;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=rna-XR_009493645.1
haplotype2-0000357	CAT	exon	57201374	57201681	.	+	.	ID=Cattle_Y_E04477;Parent=Cattle_Y_T01843;Dbxref=GeneID:104970645,GenBank:XR_009493645.1;gbkey=ncRNA;gene=LOC104970645;product=uncharacterized lncRNA, transcript variant X1;transcript_id=Cattle_Y_T01843;gene_id=Cattle_Y_G01076;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493645.1-1
haplotype2-0000357	CAT	exon	57203896	57204037	.	+	.	ID=Cattle_Y_E04478;Parent=Cattle_Y_T01843;Dbxref=GeneID:104970645,GenBank:XR_009493645.1;gbkey=ncRNA;gene=LOC104970645;product=uncharacterized lncRNA, transcript variant X1;transcript_id=Cattle_Y_T01843;gene_id=Cattle_Y_G01076;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493645.1-2
haplotype2-0000357	CAT	exon	57215031	57218913	.	+	.	ID=Cattle_Y_E04479;Parent=Cattle_Y_T01843;Dbxref=GeneID:104970645,GenBank:XR_009493645.1;gbkey=ncRNA;gene=LOC104970645;product=uncharacterized lncRNA, transcript variant X1;transcript_id=Cattle_Y_T01843;gene_id=Cattle_Y_G01076;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493645.1-3
haplotype2-0000357	CAT	lnc_RNA	57201374	57218919	.	+	.	ID=Cattle_Y_T01844;Parent=Cattle_Y_G01076;Dbxref=GeneID:104970645,GenBank:XR_009493646.1;Name=XR_009493646.1;gbkey=ncRNA;gene=LOC104970645;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 9 samples with support for all annotated introns;product=uncharacterized lncRNA%2C transcript variant X2;transcript_id=Cattle_Y_T01844;gene_id=Cattle_Y_G01076;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=rna-XR_009493646.1
haplotype2-0000357	CAT	exon	57201374	57201681	.	+	.	ID=Cattle_Y_E04480;Parent=Cattle_Y_T01844;Dbxref=GeneID:104970645,GenBank:XR_009493646.1;gbkey=ncRNA;gene=LOC104970645;product=uncharacterized lncRNA, transcript variant X2;transcript_id=Cattle_Y_T01844;gene_id=Cattle_Y_G01076;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493646.1-1
haplotype2-0000357	CAT	exon	57203896	57204037	.	+	.	ID=Cattle_Y_E04481;Parent=Cattle_Y_T01844;Dbxref=GeneID:104970645,GenBank:XR_009493646.1;gbkey=ncRNA;gene=LOC104970645;product=uncharacterized lncRNA, transcript variant X2;transcript_id=Cattle_Y_T01844;gene_id=Cattle_Y_G01076;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493646.1-2
haplotype2-0000357	CAT	exon	57215755	57218919	.	+	.	ID=Cattle_Y_E04482;Parent=Cattle_Y_T01844;Dbxref=GeneID:104970645,GenBank:XR_009493646.1;gbkey=ncRNA;gene=LOC104970645;product=uncharacterized lncRNA, transcript variant X2;transcript_id=Cattle_Y_T01844;gene_id=Cattle_Y_G01076;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493646.1-3
haplotype2-0000357	CAT	gene	57228368	57243239	.	+	.	ID=Cattle_Y_G01077;Dbxref=GeneID:132344373;Name=LOC132344373;description=uncharacterized LOC132344373;gbkey=Gene;gene=LOC132344373;gene_biotype=protein_coding;gene_id=Cattle_Y_G01077;source_id=gene-LOC132344373-2
haplotype2-0000357	CAT	mRNA	57228368	57243239	.	+	.	ID=Cattle_Y_T01845;Parent=Cattle_Y_G01077;Dbxref=GeneID:132344373,GenBank:XM_059884020.1;Name=XM_059884020.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344373;model_evidence=Supporting evidence includes similarity to: 7 ESTs%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 14 samples with support for all annotated introns;product=uncharacterized protein;transcript_id=Cattle_Y_T01845;gene_id=Cattle_Y_G01077;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884020.1
haplotype2-0000357	CAT	exon	57228368	57228765	.	+	.	ID=Cattle_Y_E04483;Parent=Cattle_Y_T01845;Dbxref=GeneID:132344373,GenBank:XM_059884020.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344373;product=uncharacterized protein;transcript_id=Cattle_Y_T01845;gene_id=Cattle_Y_G01077;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884020.1-1
haplotype2-0000357	CAT	exon	57241895	57243239	.	+	.	ID=Cattle_Y_E04484;Parent=Cattle_Y_T01845;Dbxref=GeneID:132344373,GenBank:XM_059884020.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344373;product=uncharacterized protein;transcript_id=Cattle_Y_T01845;gene_id=Cattle_Y_G01077;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884020.1-2
haplotype2-0000357	CAT	CDS	57228379	57228765	.	+	0	ID=Cattle_Y_C03928;Parent=Cattle_Y_T01845;Dbxref=GeneID:132344373,GenBank:XP_059740003.1;Name=XP_059740003.1;gbkey=CDS;gene=LOC132344373;product=uncharacterized protein;protein_id=XP_059740003.1;gene_id=Cattle_Y_G01077;transcript_id=Cattle_Y_T01845;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57241895	57241978	.	+	0	ID=Cattle_Y_C03929;Parent=Cattle_Y_T01845;Dbxref=GeneID:132344373,GenBank:XP_059740003.1;Name=XP_059740003.1;gbkey=CDS;gene=LOC132344373;product=uncharacterized protein;protein_id=XP_059740003.1;gene_id=Cattle_Y_G01077;transcript_id=Cattle_Y_T01845;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	57273480	57290578	.	+	.	ID=Cattle_Y_G01078;Dbxref=BGD:BT16923,GeneID:539266,VGNC:VGNC:37052;Name=ZBED1;description=zinc finger BED-type containing 1;gbkey=Gene;gene=ZBED1;gene_biotype=protein_coding;gene_id=Cattle_Y_G01078;source_id=gene-ZBED1-2
haplotype2-0000357	CAT	mRNA	57273480	57290578	.	+	.	ID=Cattle_Y_T01846;Parent=Cattle_Y_G01078;Dbxref=GeneID:539266,GenBank:XM_059884014.1,BGD:BT16923,VGNC:VGNC:37052;Name=XM_059884014.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZBED1;model_evidence=Supporting evidence includes similarity to: 29 ESTs%2C 6 Proteins%2C 11 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 110 samples with support for all annotated introns;product=zinc finger BED-type containing 1%2C transcript variant X1;transcript_id=Cattle_Y_T01846;gene_id=Cattle_Y_G01078;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884014.1
haplotype2-0000357	CAT	exon	57273480	57273647	.	+	.	ID=Cattle_Y_E04485;Parent=Cattle_Y_T01846;Dbxref=GeneID:539266,GenBank:XM_059884014.1,BGD:BT16923,VGNC:VGNC:37052;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZBED1;product=zinc finger BED-type containing 1, transcript variant X1;transcript_id=Cattle_Y_T01846;gene_id=Cattle_Y_G01078;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884014.1-1
haplotype2-0000357	CAT	exon	57286330	57290578	.	+	.	ID=Cattle_Y_E04486;Parent=Cattle_Y_T01846;Dbxref=GeneID:539266,GenBank:XM_059884014.1,BGD:BT16923,VGNC:VGNC:37052;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZBED1;product=zinc finger BED-type containing 1, transcript variant X1;transcript_id=Cattle_Y_T01846;gene_id=Cattle_Y_G01078;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884014.1-2
haplotype2-0000357	CAT	CDS	57286340	57288463	.	+	0	ID=Cattle_Y_C03930;Parent=Cattle_Y_T01846;Dbxref=GeneID:539266,GenBank:XP_059739997.1,BGD:BT16923,VGNC:VGNC:37052;Name=XP_059739997.1;gbkey=CDS;gene=ZBED1;product=E3 SUMO-protein ligase ZBED1;protein_id=XP_059739997.1;gene_id=Cattle_Y_G01078;transcript_id=Cattle_Y_T01846;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57273879	57290578	.	+	.	ID=Cattle_Y_T01847;Parent=Cattle_Y_G01078;Dbxref=GeneID:539266,GenBank:XM_059884015.1,BGD:BT16923,VGNC:VGNC:37052;Name=XM_059884015.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZBED1;model_evidence=Supporting evidence includes similarity to: 29 ESTs%2C 6 Proteins%2C 11 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 18 samples with support for all annotated introns;product=zinc finger BED-type containing 1%2C transcript variant X2;transcript_id=Cattle_Y_T01847;gene_id=Cattle_Y_G01078;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884015.1
haplotype2-0000357	CAT	exon	57273879	57273956	.	+	.	ID=Cattle_Y_E04487;Parent=Cattle_Y_T01847;Dbxref=GeneID:539266,GenBank:XM_059884015.1,BGD:BT16923,VGNC:VGNC:37052;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZBED1;product=zinc finger BED-type containing 1, transcript variant X2;transcript_id=Cattle_Y_T01847;gene_id=Cattle_Y_G01078;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884015.1-1
haplotype2-0000357	CAT	exon	57286330	57290578	.	+	.	ID=Cattle_Y_E04488;Parent=Cattle_Y_T01847;Dbxref=GeneID:539266,GenBank:XM_059884015.1,BGD:BT16923,VGNC:VGNC:37052;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=ZBED1;product=zinc finger BED-type containing 1, transcript variant X2;transcript_id=Cattle_Y_T01847;gene_id=Cattle_Y_G01078;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884015.1-2
haplotype2-0000357	CAT	CDS	57286340	57288463	.	+	0	ID=Cattle_Y_C03931;Parent=Cattle_Y_T01847;Dbxref=GeneID:539266,GenBank:XP_059739998.1,BGD:BT16923,VGNC:VGNC:37052;Name=XP_059739998.1;gbkey=CDS;gene=ZBED1;product=E3 SUMO-protein ligase ZBED1;protein_id=XP_059739998.1;gene_id=Cattle_Y_G01078;transcript_id=Cattle_Y_T01847;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	57273480	57498384	.	+	.	ID=Cattle_Y_G01079;Dbxref=BGD:BT15104,GeneID:513482;Name=DHRSX;description=dehydrogenase/reductase X-linked;gbkey=Gene;gene=DHRSX;gene_biotype=protein_coding;gene_id=Cattle_Y_G01079;source_id=gene-DHRSX-2
haplotype2-0000357	CAT	mRNA	57273480	57417054	.	+	.	ID=Cattle_Y_T01848;Parent=Cattle_Y_G01079;Dbxref=GeneID:513482,GenBank:XM_059884016.1,BGD:BT15104;Name=XM_059884016.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=DHRSX;model_evidence=Supporting evidence includes similarity to: 5 ESTs%2C 3 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 37 samples with support for all annotated introns;product=dehydrogenase/reductase X-linked%2C transcript variant X1;transcript_id=Cattle_Y_T01848;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884016.1
haplotype2-0000357	CAT	exon	57273480	57273647	.	+	.	ID=Cattle_Y_E04489;Parent=Cattle_Y_T01848;Dbxref=GeneID:513482,GenBank:XM_059884016.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X1;transcript_id=Cattle_Y_T01848;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884016.1-1
haplotype2-0000357	CAT	exon	57314563	57314670	.	+	.	ID=Cattle_Y_E04490;Parent=Cattle_Y_T01848;Dbxref=GeneID:513482,GenBank:XM_059884016.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X1;transcript_id=Cattle_Y_T01848;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884016.1-2
haplotype2-0000357	CAT	exon	57321780	57321848	.	+	.	ID=Cattle_Y_E04491;Parent=Cattle_Y_T01848;Dbxref=GeneID:513482,GenBank:XM_059884016.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X1;transcript_id=Cattle_Y_T01848;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884016.1-3
haplotype2-0000357	CAT	exon	57380667	57380768	.	+	.	ID=Cattle_Y_E04492;Parent=Cattle_Y_T01848;Dbxref=GeneID:513482,GenBank:XM_059884016.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X1;transcript_id=Cattle_Y_T01848;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884016.1-4
haplotype2-0000357	CAT	exon	57393269	57393476	.	+	.	ID=Cattle_Y_E04493;Parent=Cattle_Y_T01848;Dbxref=GeneID:513482,GenBank:XM_059884016.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X1;transcript_id=Cattle_Y_T01848;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884016.1-5
haplotype2-0000357	CAT	exon	57402651	57402858	.	+	.	ID=Cattle_Y_E04494;Parent=Cattle_Y_T01848;Dbxref=GeneID:513482,GenBank:XM_059884016.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X1;transcript_id=Cattle_Y_T01848;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884016.1-6
haplotype2-0000357	CAT	exon	57416565	57417054	.	+	.	ID=Cattle_Y_E04495;Parent=Cattle_Y_T01848;Dbxref=GeneID:513482,GenBank:XM_059884016.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X1;transcript_id=Cattle_Y_T01848;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884016.1-7
haplotype2-0000357	CAT	CDS	57273539	57273647	.	+	0	ID=Cattle_Y_C03932;Parent=Cattle_Y_T01848;Dbxref=GeneID:513482,GenBank:XP_059739999.1,BGD:BT15104;Name=XP_059739999.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059739999.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01848;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57314563	57314670	.	+	2	ID=Cattle_Y_C03933;Parent=Cattle_Y_T01848;Dbxref=GeneID:513482,GenBank:XP_059739999.1,BGD:BT15104;Name=XP_059739999.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059739999.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01848;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57321780	57321848	.	+	2	ID=Cattle_Y_C03934;Parent=Cattle_Y_T01848;Dbxref=GeneID:513482,GenBank:XP_059739999.1,BGD:BT15104;Name=XP_059739999.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059739999.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01848;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57380667	57380768	.	+	2	ID=Cattle_Y_C03935;Parent=Cattle_Y_T01848;Dbxref=GeneID:513482,GenBank:XP_059739999.1,BGD:BT15104;Name=XP_059739999.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059739999.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01848;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57393269	57393476	.	+	2	ID=Cattle_Y_C03936;Parent=Cattle_Y_T01848;Dbxref=GeneID:513482,GenBank:XP_059739999.1,BGD:BT15104;Name=XP_059739999.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059739999.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01848;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57402651	57402858	.	+	1	ID=Cattle_Y_C03937;Parent=Cattle_Y_T01848;Dbxref=GeneID:513482,GenBank:XP_059739999.1,BGD:BT15104;Name=XP_059739999.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059739999.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01848;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57416565	57416789	.	+	0	ID=Cattle_Y_C03938;Parent=Cattle_Y_T01848;Dbxref=GeneID:513482,GenBank:XP_059739999.1,BGD:BT15104;Name=XP_059739999.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059739999.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01848;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57273480	57420022	.	+	.	ID=Cattle_Y_T01849;Parent=Cattle_Y_G01079;Dbxref=GeneID:513482,GenBank:XM_059884017.1,BGD:BT15104;Name=XM_059884017.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=DHRSX;model_evidence=Supporting evidence includes similarity to: 4 ESTs%2C 3 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 33 samples with support for all annotated introns;product=dehydrogenase/reductase X-linked%2C transcript variant X2;transcript_id=Cattle_Y_T01849;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884017.1
haplotype2-0000357	CAT	exon	57273480	57273647	.	+	.	ID=Cattle_Y_E04496;Parent=Cattle_Y_T01849;Dbxref=GeneID:513482,GenBank:XM_059884017.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X2;transcript_id=Cattle_Y_T01849;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884017.1-1
haplotype2-0000357	CAT	exon	57314563	57314670	.	+	.	ID=Cattle_Y_E04497;Parent=Cattle_Y_T01849;Dbxref=GeneID:513482,GenBank:XM_059884017.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X2;transcript_id=Cattle_Y_T01849;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884017.1-2
haplotype2-0000357	CAT	exon	57321780	57321848	.	+	.	ID=Cattle_Y_E04498;Parent=Cattle_Y_T01849;Dbxref=GeneID:513482,GenBank:XM_059884017.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X2;transcript_id=Cattle_Y_T01849;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884017.1-3
haplotype2-0000357	CAT	exon	57380667	57380768	.	+	.	ID=Cattle_Y_E04499;Parent=Cattle_Y_T01849;Dbxref=GeneID:513482,GenBank:XM_059884017.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X2;transcript_id=Cattle_Y_T01849;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884017.1-4
haplotype2-0000357	CAT	exon	57393269	57393476	.	+	.	ID=Cattle_Y_E04500;Parent=Cattle_Y_T01849;Dbxref=GeneID:513482,GenBank:XM_059884017.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X2;transcript_id=Cattle_Y_T01849;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884017.1-5
haplotype2-0000357	CAT	exon	57402651	57402858	.	+	.	ID=Cattle_Y_E04501;Parent=Cattle_Y_T01849;Dbxref=GeneID:513482,GenBank:XM_059884017.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X2;transcript_id=Cattle_Y_T01849;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884017.1-6
haplotype2-0000357	CAT	exon	57416565	57416808	.	+	.	ID=Cattle_Y_E04502;Parent=Cattle_Y_T01849;Dbxref=GeneID:513482,GenBank:XM_059884017.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X2;transcript_id=Cattle_Y_T01849;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884017.1-7
haplotype2-0000357	CAT	exon	57419528	57420022	.	+	.	ID=Cattle_Y_E04503;Parent=Cattle_Y_T01849;Dbxref=GeneID:513482,GenBank:XM_059884017.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X2;transcript_id=Cattle_Y_T01849;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884017.1-8
haplotype2-0000357	CAT	CDS	57273539	57273647	.	+	0	ID=Cattle_Y_C03939;Parent=Cattle_Y_T01849;Dbxref=GeneID:513482,GenBank:XP_059740000.1,BGD:BT15104;Name=XP_059740000.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059740000.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01849;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57314563	57314670	.	+	2	ID=Cattle_Y_C03940;Parent=Cattle_Y_T01849;Dbxref=GeneID:513482,GenBank:XP_059740000.1,BGD:BT15104;Name=XP_059740000.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059740000.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01849;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57321780	57321848	.	+	2	ID=Cattle_Y_C03941;Parent=Cattle_Y_T01849;Dbxref=GeneID:513482,GenBank:XP_059740000.1,BGD:BT15104;Name=XP_059740000.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059740000.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01849;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57380667	57380768	.	+	2	ID=Cattle_Y_C03942;Parent=Cattle_Y_T01849;Dbxref=GeneID:513482,GenBank:XP_059740000.1,BGD:BT15104;Name=XP_059740000.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059740000.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01849;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57393269	57393476	.	+	2	ID=Cattle_Y_C03943;Parent=Cattle_Y_T01849;Dbxref=GeneID:513482,GenBank:XP_059740000.1,BGD:BT15104;Name=XP_059740000.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059740000.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01849;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57402651	57402858	.	+	1	ID=Cattle_Y_C03944;Parent=Cattle_Y_T01849;Dbxref=GeneID:513482,GenBank:XP_059740000.1,BGD:BT15104;Name=XP_059740000.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059740000.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01849;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57416565	57416789	.	+	0	ID=Cattle_Y_C03945;Parent=Cattle_Y_T01849;Dbxref=GeneID:513482,GenBank:XP_059740000.1,BGD:BT15104;Name=XP_059740000.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059740000.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01849;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57273480	57420022	.	+	.	ID=Cattle_Y_T01850;Parent=Cattle_Y_G01079;Dbxref=GeneID:513482,GenBank:XM_059884018.1,BGD:BT15104;Name=XM_059884018.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=DHRSX;model_evidence=Supporting evidence includes similarity to: 2 ESTs%2C 3 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 9 samples with support for all annotated introns;product=dehydrogenase/reductase X-linked%2C transcript variant X5;transcript_id=Cattle_Y_T01850;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884018.1
haplotype2-0000357	CAT	exon	57273480	57273647	.	+	.	ID=Cattle_Y_E04504;Parent=Cattle_Y_T01850;Dbxref=GeneID:513482,GenBank:XM_059884018.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X5;transcript_id=Cattle_Y_T01850;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884018.1-1
haplotype2-0000357	CAT	exon	57314563	57314670	.	+	.	ID=Cattle_Y_E04505;Parent=Cattle_Y_T01850;Dbxref=GeneID:513482,GenBank:XM_059884018.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X5;transcript_id=Cattle_Y_T01850;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884018.1-2
haplotype2-0000357	CAT	exon	57321780	57321848	.	+	.	ID=Cattle_Y_E04506;Parent=Cattle_Y_T01850;Dbxref=GeneID:513482,GenBank:XM_059884018.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X5;transcript_id=Cattle_Y_T01850;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884018.1-3
haplotype2-0000357	CAT	exon	57380667	57380768	.	+	.	ID=Cattle_Y_E04507;Parent=Cattle_Y_T01850;Dbxref=GeneID:513482,GenBank:XM_059884018.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X5;transcript_id=Cattle_Y_T01850;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884018.1-4
haplotype2-0000357	CAT	exon	57393269	57393476	.	+	.	ID=Cattle_Y_E04508;Parent=Cattle_Y_T01850;Dbxref=GeneID:513482,GenBank:XM_059884018.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X5;transcript_id=Cattle_Y_T01850;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884018.1-5
haplotype2-0000357	CAT	exon	57402651	57402858	.	+	.	ID=Cattle_Y_E04509;Parent=Cattle_Y_T01850;Dbxref=GeneID:513482,GenBank:XM_059884018.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X5;transcript_id=Cattle_Y_T01850;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884018.1-6
haplotype2-0000357	CAT	exon	57416565	57416827	.	+	.	ID=Cattle_Y_E04510;Parent=Cattle_Y_T01850;Dbxref=GeneID:513482,GenBank:XM_059884018.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X5;transcript_id=Cattle_Y_T01850;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884018.1-7
haplotype2-0000357	CAT	exon	57419528	57420022	.	+	.	ID=Cattle_Y_E04511;Parent=Cattle_Y_T01850;Dbxref=GeneID:513482,GenBank:XM_059884018.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X5;transcript_id=Cattle_Y_T01850;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884018.1-8
haplotype2-0000357	CAT	CDS	57273539	57273647	.	+	0	ID=Cattle_Y_C03946;Parent=Cattle_Y_T01850;Dbxref=GeneID:513482,GenBank:XP_059740001.1,BGD:BT15104;Name=XP_059740001.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059740001.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01850;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57314563	57314670	.	+	2	ID=Cattle_Y_C03947;Parent=Cattle_Y_T01850;Dbxref=GeneID:513482,GenBank:XP_059740001.1,BGD:BT15104;Name=XP_059740001.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059740001.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01850;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57321780	57321848	.	+	2	ID=Cattle_Y_C03948;Parent=Cattle_Y_T01850;Dbxref=GeneID:513482,GenBank:XP_059740001.1,BGD:BT15104;Name=XP_059740001.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059740001.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01850;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57380667	57380768	.	+	2	ID=Cattle_Y_C03949;Parent=Cattle_Y_T01850;Dbxref=GeneID:513482,GenBank:XP_059740001.1,BGD:BT15104;Name=XP_059740001.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059740001.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01850;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57393269	57393476	.	+	2	ID=Cattle_Y_C03950;Parent=Cattle_Y_T01850;Dbxref=GeneID:513482,GenBank:XP_059740001.1,BGD:BT15104;Name=XP_059740001.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059740001.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01850;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57402651	57402858	.	+	1	ID=Cattle_Y_C03951;Parent=Cattle_Y_T01850;Dbxref=GeneID:513482,GenBank:XP_059740001.1,BGD:BT15104;Name=XP_059740001.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059740001.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01850;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57416565	57416789	.	+	0	ID=Cattle_Y_C03952;Parent=Cattle_Y_T01850;Dbxref=GeneID:513482,GenBank:XP_059740001.1,BGD:BT15104;Name=XP_059740001.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059740001.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01850;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57273480	57418755	.	+	.	ID=Cattle_Y_T01851;Parent=Cattle_Y_G01079;Dbxref=GeneID:513482,GenBank:XM_059884019.1,BGD:BT15104;Name=XM_059884019.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=DHRSX;model_evidence=Supporting evidence includes similarity to: 2 ESTs%2C 3 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 9 samples with support for all annotated introns;product=dehydrogenase/reductase X-linked%2C transcript variant X6;transcript_id=Cattle_Y_T01851;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884019.1
haplotype2-0000357	CAT	exon	57273480	57273647	.	+	.	ID=Cattle_Y_E04512;Parent=Cattle_Y_T01851;Dbxref=GeneID:513482,GenBank:XM_059884019.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X6;transcript_id=Cattle_Y_T01851;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884019.1-1
haplotype2-0000357	CAT	exon	57314563	57314670	.	+	.	ID=Cattle_Y_E04513;Parent=Cattle_Y_T01851;Dbxref=GeneID:513482,GenBank:XM_059884019.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X6;transcript_id=Cattle_Y_T01851;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884019.1-2
haplotype2-0000357	CAT	exon	57321780	57321848	.	+	.	ID=Cattle_Y_E04514;Parent=Cattle_Y_T01851;Dbxref=GeneID:513482,GenBank:XM_059884019.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X6;transcript_id=Cattle_Y_T01851;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884019.1-3
haplotype2-0000357	CAT	exon	57380667	57380768	.	+	.	ID=Cattle_Y_E04515;Parent=Cattle_Y_T01851;Dbxref=GeneID:513482,GenBank:XM_059884019.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X6;transcript_id=Cattle_Y_T01851;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884019.1-4
haplotype2-0000357	CAT	exon	57393269	57393476	.	+	.	ID=Cattle_Y_E04516;Parent=Cattle_Y_T01851;Dbxref=GeneID:513482,GenBank:XM_059884019.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X6;transcript_id=Cattle_Y_T01851;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884019.1-5
haplotype2-0000357	CAT	exon	57402651	57402858	.	+	.	ID=Cattle_Y_E04517;Parent=Cattle_Y_T01851;Dbxref=GeneID:513482,GenBank:XM_059884019.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X6;transcript_id=Cattle_Y_T01851;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884019.1-6
haplotype2-0000357	CAT	exon	57416565	57416808	.	+	.	ID=Cattle_Y_E04518;Parent=Cattle_Y_T01851;Dbxref=GeneID:513482,GenBank:XM_059884019.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X6;transcript_id=Cattle_Y_T01851;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884019.1-7
haplotype2-0000357	CAT	exon	57418388	57418755	.	+	.	ID=Cattle_Y_E04519;Parent=Cattle_Y_T01851;Dbxref=GeneID:513482,GenBank:XM_059884019.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X6;transcript_id=Cattle_Y_T01851;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884019.1-8
haplotype2-0000357	CAT	CDS	57273539	57273647	.	+	0	ID=Cattle_Y_C03953;Parent=Cattle_Y_T01851;Dbxref=GeneID:513482,GenBank:XP_059740002.1,BGD:BT15104;Name=XP_059740002.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059740002.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01851;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57314563	57314670	.	+	2	ID=Cattle_Y_C03954;Parent=Cattle_Y_T01851;Dbxref=GeneID:513482,GenBank:XP_059740002.1,BGD:BT15104;Name=XP_059740002.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059740002.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01851;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57321780	57321848	.	+	2	ID=Cattle_Y_C03955;Parent=Cattle_Y_T01851;Dbxref=GeneID:513482,GenBank:XP_059740002.1,BGD:BT15104;Name=XP_059740002.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059740002.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01851;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57380667	57380768	.	+	2	ID=Cattle_Y_C03956;Parent=Cattle_Y_T01851;Dbxref=GeneID:513482,GenBank:XP_059740002.1,BGD:BT15104;Name=XP_059740002.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059740002.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01851;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57393269	57393476	.	+	2	ID=Cattle_Y_C03957;Parent=Cattle_Y_T01851;Dbxref=GeneID:513482,GenBank:XP_059740002.1,BGD:BT15104;Name=XP_059740002.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059740002.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01851;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57402651	57402858	.	+	1	ID=Cattle_Y_C03958;Parent=Cattle_Y_T01851;Dbxref=GeneID:513482,GenBank:XP_059740002.1,BGD:BT15104;Name=XP_059740002.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059740002.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01851;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57416565	57416789	.	+	0	ID=Cattle_Y_C03959;Parent=Cattle_Y_T01851;Dbxref=GeneID:513482,GenBank:XP_059740002.1,BGD:BT15104;Name=XP_059740002.1;gbkey=CDS;gene=DHRSX;product=dehydrogenase/reductase SDR family member on chromosome X;protein_id=XP_059740002.1;gene_id=Cattle_Y_G01079;transcript_id=Cattle_Y_T01851;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	transcript	57273480	57498374	.	+	.	ID=Cattle_Y_T01852;Parent=Cattle_Y_G01079;Dbxref=GeneID:513482,GenBank:XR_009493643.1,BGD:BT15104;Name=XR_009493643.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=misc_RNA;gene=DHRSX;model_evidence=Supporting evidence includes similarity to: 2 ESTs%2C 3 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=dehydrogenase/reductase X-linked%2C transcript variant X3;transcript_id=Cattle_Y_T01852;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=rna-XR_009493643.1
haplotype2-0000357	CAT	exon	57273480	57273647	.	+	.	ID=Cattle_Y_E04520;Parent=Cattle_Y_T01852;Dbxref=GeneID:513482,GenBank:XR_009493643.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=misc_RNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X3;transcript_id=Cattle_Y_T01852;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493643.1-1
haplotype2-0000357	CAT	exon	57314563	57314670	.	+	.	ID=Cattle_Y_E04521;Parent=Cattle_Y_T01852;Dbxref=GeneID:513482,GenBank:XR_009493643.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=misc_RNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X3;transcript_id=Cattle_Y_T01852;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493643.1-2
haplotype2-0000357	CAT	exon	57321780	57321848	.	+	.	ID=Cattle_Y_E04522;Parent=Cattle_Y_T01852;Dbxref=GeneID:513482,GenBank:XR_009493643.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=misc_RNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X3;transcript_id=Cattle_Y_T01852;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493643.1-3
haplotype2-0000357	CAT	exon	57380667	57380768	.	+	.	ID=Cattle_Y_E04523;Parent=Cattle_Y_T01852;Dbxref=GeneID:513482,GenBank:XR_009493643.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=misc_RNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X3;transcript_id=Cattle_Y_T01852;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493643.1-4
haplotype2-0000357	CAT	exon	57393269	57393476	.	+	.	ID=Cattle_Y_E04524;Parent=Cattle_Y_T01852;Dbxref=GeneID:513482,GenBank:XR_009493643.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=misc_RNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X3;transcript_id=Cattle_Y_T01852;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493643.1-5
haplotype2-0000357	CAT	exon	57402651	57402858	.	+	.	ID=Cattle_Y_E04525;Parent=Cattle_Y_T01852;Dbxref=GeneID:513482,GenBank:XR_009493643.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=misc_RNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X3;transcript_id=Cattle_Y_T01852;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493643.1-6
haplotype2-0000357	CAT	exon	57416565	57416808	.	+	.	ID=Cattle_Y_E04526;Parent=Cattle_Y_T01852;Dbxref=GeneID:513482,GenBank:XR_009493643.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=misc_RNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X3;transcript_id=Cattle_Y_T01852;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493643.1-7
haplotype2-0000357	CAT	exon	57455968	57456057	.	+	.	ID=Cattle_Y_E04527;Parent=Cattle_Y_T01852;Dbxref=GeneID:513482,GenBank:XR_009493643.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=misc_RNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X3;transcript_id=Cattle_Y_T01852;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493643.1-8
haplotype2-0000357	CAT	exon	57491570	57491654	.	+	.	ID=Cattle_Y_E04528;Parent=Cattle_Y_T01852;Dbxref=GeneID:513482,GenBank:XR_009493643.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=misc_RNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X3;transcript_id=Cattle_Y_T01852;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493643.1-9
haplotype2-0000357	CAT	exon	57498172	57498374	.	+	.	ID=Cattle_Y_E04529;Parent=Cattle_Y_T01852;Dbxref=GeneID:513482,GenBank:XR_009493643.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=misc_RNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X3;transcript_id=Cattle_Y_T01852;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493643.1-10
haplotype2-0000357	CAT	transcript	57273480	57498384	.	+	.	ID=Cattle_Y_T01853;Parent=Cattle_Y_G01079;Dbxref=GeneID:513482,GenBank:XR_009493644.1,BGD:BT15104;Name=XR_009493644.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=misc_RNA;gene=DHRSX;model_evidence=Supporting evidence includes similarity to: 2 ESTs%2C 3 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 3 samples with support for all annotated introns;product=dehydrogenase/reductase X-linked%2C transcript variant X4;transcript_id=Cattle_Y_T01853;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=rna-XR_009493644.1
haplotype2-0000357	CAT	exon	57273480	57273647	.	+	.	ID=Cattle_Y_E04530;Parent=Cattle_Y_T01853;Dbxref=GeneID:513482,GenBank:XR_009493644.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=misc_RNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X4;transcript_id=Cattle_Y_T01853;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493644.1-1
haplotype2-0000357	CAT	exon	57314563	57314670	.	+	.	ID=Cattle_Y_E04531;Parent=Cattle_Y_T01853;Dbxref=GeneID:513482,GenBank:XR_009493644.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=misc_RNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X4;transcript_id=Cattle_Y_T01853;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493644.1-2
haplotype2-0000357	CAT	exon	57321780	57321848	.	+	.	ID=Cattle_Y_E04532;Parent=Cattle_Y_T01853;Dbxref=GeneID:513482,GenBank:XR_009493644.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=misc_RNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X4;transcript_id=Cattle_Y_T01853;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493644.1-3
haplotype2-0000357	CAT	exon	57380667	57380768	.	+	.	ID=Cattle_Y_E04533;Parent=Cattle_Y_T01853;Dbxref=GeneID:513482,GenBank:XR_009493644.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=misc_RNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X4;transcript_id=Cattle_Y_T01853;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493644.1-4
haplotype2-0000357	CAT	exon	57393269	57393476	.	+	.	ID=Cattle_Y_E04534;Parent=Cattle_Y_T01853;Dbxref=GeneID:513482,GenBank:XR_009493644.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=misc_RNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X4;transcript_id=Cattle_Y_T01853;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493644.1-5
haplotype2-0000357	CAT	exon	57402651	57402858	.	+	.	ID=Cattle_Y_E04535;Parent=Cattle_Y_T01853;Dbxref=GeneID:513482,GenBank:XR_009493644.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=misc_RNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X4;transcript_id=Cattle_Y_T01853;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493644.1-6
haplotype2-0000357	CAT	exon	57416565	57416808	.	+	.	ID=Cattle_Y_E04536;Parent=Cattle_Y_T01853;Dbxref=GeneID:513482,GenBank:XR_009493644.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=misc_RNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X4;transcript_id=Cattle_Y_T01853;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493644.1-7
haplotype2-0000357	CAT	exon	57422721	57425464	.	+	.	ID=Cattle_Y_E04537;Parent=Cattle_Y_T01853;Dbxref=GeneID:513482,GenBank:XR_009493644.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=misc_RNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X4;transcript_id=Cattle_Y_T01853;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493644.1-8
haplotype2-0000357	CAT	exon	57455968	57456057	.	+	.	ID=Cattle_Y_E04538;Parent=Cattle_Y_T01853;Dbxref=GeneID:513482,GenBank:XR_009493644.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=misc_RNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X4;transcript_id=Cattle_Y_T01853;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493644.1-9
haplotype2-0000357	CAT	exon	57498172	57498384	.	+	.	ID=Cattle_Y_E04539;Parent=Cattle_Y_T01853;Dbxref=GeneID:513482,GenBank:XR_009493644.1,BGD:BT15104;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=misc_RNA;gene=DHRSX;product=dehydrogenase/reductase X-linked, transcript variant X4;transcript_id=Cattle_Y_T01853;gene_id=Cattle_Y_G01079;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493644.1-10
haplotype2-0000357	CAT	gene	57279910	57280038	.	-	.	ID=Cattle_Y_G01080;Dbxref=GeneID:112445271;Name=LOC112445271;description=small nucleolar RNA U109;gbkey=Gene;gene=LOC112445271;gene_biotype=snoRNA;gene_id=Cattle_Y_G01080;source_id=gene-LOC112445271-2
haplotype2-0000357	CAT	snoRNA	57279910	57280038	.	-	.	ID=Cattle_Y_T01854;Parent=Cattle_Y_G01080;Dbxref=GeneID:112445271,RFAM:RF01233,GenBank:XR_009493667.1;Name=XR_009493667.1;gbkey=ncRNA;gene=LOC112445271;inference=COORDINATES: profile:INFERNAL:1.1.4;product=small nucleolar RNA U109;transcript_id=Cattle_Y_T01854;gene_id=Cattle_Y_G01080;gene_biotype=snoRNA;transcript_biotype=snoRNA;source_id=rna-XR_009493667.1
haplotype2-0000357	CAT	exon	57279910	57280038	.	-	.	ID=Cattle_Y_E04540;Parent=Cattle_Y_T01854;Dbxref=GeneID:112445271,RFAM:RF01233,GenBank:XR_009493667.1;gbkey=ncRNA;gene=LOC112445271;inference=COORDINATES: profile:INFERNAL:1.1.4;product=small nucleolar RNA U109;transcript_id=Cattle_Y_T01854;gene_id=Cattle_Y_G01080;gene_biotype=snoRNA;transcript_biotype=snoRNA;source_id=exon-XR_009493667.1-1
haplotype2-0000357	CAT	gene	57636903	57663603	.	-	.	ID=Cattle_Y_G01081;Dbxref=GeneID:132344460;Name=LOC132344460;description=acetylserotonin O-methyltransferase-like;gbkey=Gene;gene=LOC132344460;gene_biotype=pseudogene;pseudo=true;gene_id=Cattle_Y_G01081;source_id=gene-LOC132344460
haplotype2-0000357	CAT	exon	57636903	57637908	.	-	.	ID=Cattle_Y_T01855;Parent=Cattle_Y_G01081;Dbxref=GeneID:132344460;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=exon;gene=LOC132344460;model_evidence=Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 97%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G01081;transcript_id=Cattle_Y_T01855;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344460-8
haplotype2-0000357	CAT	exon	57641229	57641351	.	-	.	ID=Cattle_Y_T01856;Parent=Cattle_Y_G01081;Dbxref=GeneID:132344460;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=exon;gene=LOC132344460;model_evidence=Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 97%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G01081;transcript_id=Cattle_Y_T01856;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344460-7
haplotype2-0000357	CAT	exon	57643948	57644088	.	-	.	ID=Cattle_Y_T01857;Parent=Cattle_Y_G01081;Dbxref=GeneID:132344460;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=exon;gene=LOC132344460;model_evidence=Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 97%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G01081;transcript_id=Cattle_Y_T01857;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344460-6
haplotype2-0000357	CAT	exon	57645101	57645219	.	-	.	ID=Cattle_Y_T01858;Parent=Cattle_Y_G01081;Dbxref=GeneID:132344460;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=exon;gene=LOC132344460;model_evidence=Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 97%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G01081;transcript_id=Cattle_Y_T01858;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344460-5
haplotype2-0000357	CAT	exon	57656363	57656431	.	-	.	ID=Cattle_Y_T01859;Parent=Cattle_Y_G01081;Dbxref=GeneID:132344460;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=exon;gene=LOC132344460;model_evidence=Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 97%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G01081;transcript_id=Cattle_Y_T01859;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344460-4
haplotype2-0000357	CAT	exon	57657067	57657196	.	-	.	ID=Cattle_Y_T01860;Parent=Cattle_Y_G01081;Dbxref=GeneID:132344460;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=exon;gene=LOC132344460;model_evidence=Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 97%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G01081;transcript_id=Cattle_Y_T01860;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344460-3
haplotype2-0000357	CAT	exon	57659309	57659483	.	-	.	ID=Cattle_Y_T01861;Parent=Cattle_Y_G01081;Dbxref=GeneID:132344460;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=exon;gene=LOC132344460;model_evidence=Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 97%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G01081;transcript_id=Cattle_Y_T01861;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344460-2
haplotype2-0000357	CAT	exon	57662466	57663603	.	-	.	ID=Cattle_Y_T01862;Parent=Cattle_Y_G01081;Dbxref=GeneID:132344460;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=exon;gene=LOC132344460;model_evidence=Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 97%25 coverage of the annotated genomic feature by RNAseq alignments;pseudo=true;gene_id=Cattle_Y_G01081;transcript_id=Cattle_Y_T01862;gene_biotype=pseudogene;transcript_biotype=pseudogene;source_id=id-LOC132344460
haplotype2-0000357	CAT	gene	57674661	57685424	.	-	.	ID=Cattle_Y_G01082;Dbxref=GeneID:100850391,VGNC:VGNC:106636;Name=AKAP17A;description=A-kinase anchoring protein 17A;gbkey=Gene;gene=AKAP17A;gene_biotype=protein_coding;gene_id=Cattle_Y_G01082;source_id=gene-AKAP17A
haplotype2-0000357	CAT	mRNA	57674661	57685424	.	-	.	ID=Cattle_Y_T01863;Parent=Cattle_Y_G01082;Dbxref=GeneID:100850391,GenBank:XM_024990316.2,VGNC:VGNC:106636;Name=XM_024990316.2;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=AKAP17A;model_evidence=Supporting evidence includes similarity to: 24 ESTs%2C 4 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 111 samples with support for all annotated introns;product=A-kinase anchoring protein 17A;transcript_id=Cattle_Y_T01863;gene_id=Cattle_Y_G01082;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_024990316.2
haplotype2-0000357	CAT	exon	57674661	57676634	.	-	.	ID=Cattle_Y_E04541;Parent=Cattle_Y_T01863;Dbxref=GeneID:100850391,GenBank:XM_024990316.2,VGNC:VGNC:106636;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=AKAP17A;product=A-kinase anchoring protein 17A;transcript_id=Cattle_Y_T01863;gene_id=Cattle_Y_G01082;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024990316.2-5
haplotype2-0000357	CAT	exon	57678263	57678503	.	-	.	ID=Cattle_Y_E04542;Parent=Cattle_Y_T01863;Dbxref=GeneID:100850391,GenBank:XM_024990316.2,VGNC:VGNC:106636;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=AKAP17A;product=A-kinase anchoring protein 17A;transcript_id=Cattle_Y_T01863;gene_id=Cattle_Y_G01082;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024990316.2-4
haplotype2-0000357	CAT	exon	57681515	57681663	.	-	.	ID=Cattle_Y_E04543;Parent=Cattle_Y_T01863;Dbxref=GeneID:100850391,GenBank:XM_024990316.2,VGNC:VGNC:106636;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=AKAP17A;product=A-kinase anchoring protein 17A;transcript_id=Cattle_Y_T01863;gene_id=Cattle_Y_G01082;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024990316.2-3
haplotype2-0000357	CAT	exon	57682263	57683040	.	-	.	ID=Cattle_Y_E04544;Parent=Cattle_Y_T01863;Dbxref=GeneID:100850391,GenBank:XM_024990316.2,VGNC:VGNC:106636;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=AKAP17A;product=A-kinase anchoring protein 17A;transcript_id=Cattle_Y_T01863;gene_id=Cattle_Y_G01082;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024990316.2-2
haplotype2-0000357	CAT	exon	57685270	57685424	.	-	.	ID=Cattle_Y_E04545;Parent=Cattle_Y_T01863;Dbxref=GeneID:100850391,GenBank:XM_024990316.2,VGNC:VGNC:106636;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=AKAP17A;product=A-kinase anchoring protein 17A;transcript_id=Cattle_Y_T01863;gene_id=Cattle_Y_G01082;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024990316.2-1
haplotype2-0000357	CAT	CDS	57675681	57676634	.	-	0	ID=Cattle_Y_C03960;Parent=Cattle_Y_T01863;Dbxref=GeneID:100850391,GenBank:XP_024846084.1,VGNC:VGNC:106636;Name=XP_024846084.1;gbkey=CDS;gene=AKAP17A;product=A-kinase anchor protein 17A;protein_id=XP_024846084.1;gene_id=Cattle_Y_G01082;transcript_id=Cattle_Y_T01863;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57678263	57678503	.	-	1	ID=Cattle_Y_C03961;Parent=Cattle_Y_T01863;Dbxref=GeneID:100850391,GenBank:XP_024846084.1,VGNC:VGNC:106636;Name=XP_024846084.1;gbkey=CDS;gene=AKAP17A;product=A-kinase anchor protein 17A;protein_id=XP_024846084.1;gene_id=Cattle_Y_G01082;transcript_id=Cattle_Y_T01863;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57681515	57681663	.	-	0	ID=Cattle_Y_C03962;Parent=Cattle_Y_T01863;Dbxref=GeneID:100850391,GenBank:XP_024846084.1,VGNC:VGNC:106636;Name=XP_024846084.1;gbkey=CDS;gene=AKAP17A;product=A-kinase anchor protein 17A;protein_id=XP_024846084.1;gene_id=Cattle_Y_G01082;transcript_id=Cattle_Y_T01863;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57682263	57683024	.	-	0	ID=Cattle_Y_C03963;Parent=Cattle_Y_T01863;Dbxref=GeneID:100850391,GenBank:XP_024846084.1,VGNC:VGNC:106636;Name=XP_024846084.1;gbkey=CDS;gene=AKAP17A;product=A-kinase anchor protein 17A;protein_id=XP_024846084.1;gene_id=Cattle_Y_G01082;transcript_id=Cattle_Y_T01863;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	57683618	57692797	.	+	.	ID=Cattle_Y_G01083;Dbxref=GeneID:112445918;Name=LOC112445918;description=uncharacterized LOC112445918;gbkey=Gene;gene=LOC112445918;gene_biotype=protein_coding;gene_id=Cattle_Y_G01083;source_id=gene-LOC112445918
haplotype2-0000357	CAT	mRNA	57683618	57692797	.	+	.	ID=Cattle_Y_T01864;Parent=Cattle_Y_G01083;Dbxref=GeneID:112445918,GenBank:XM_059884001.1;Name=XM_059884001.1;gbkey=mRNA;gene=LOC112445918;model_evidence=Supporting evidence includes similarity to: 1 Protein;product=uncharacterized protein;transcript_id=Cattle_Y_T01864;gene_id=Cattle_Y_G01083;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884001.1
haplotype2-0000357	CAT	exon	57683618	57683624	.	+	.	ID=Cattle_Y_E04546;Parent=Cattle_Y_T01864;Dbxref=GeneID:112445918,GenBank:XM_059884001.1;gbkey=mRNA;gene=LOC112445918;product=uncharacterized protein;transcript_id=Cattle_Y_T01864;gene_id=Cattle_Y_G01083;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884001.1-1
haplotype2-0000357	CAT	exon	57683892	57683963	.	+	.	ID=Cattle_Y_E04547;Parent=Cattle_Y_T01864;Dbxref=GeneID:112445918,GenBank:XM_059884001.1;gbkey=mRNA;gene=LOC112445918;product=uncharacterized protein;transcript_id=Cattle_Y_T01864;gene_id=Cattle_Y_G01083;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884001.1-2
haplotype2-0000357	CAT	exon	57684546	57684611	.	+	.	ID=Cattle_Y_E04548;Parent=Cattle_Y_T01864;Dbxref=GeneID:112445918,GenBank:XM_059884001.1;gbkey=mRNA;gene=LOC112445918;product=uncharacterized protein;transcript_id=Cattle_Y_T01864;gene_id=Cattle_Y_G01083;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884001.1-3
haplotype2-0000357	CAT	exon	57684776	57684888	.	+	.	ID=Cattle_Y_E04549;Parent=Cattle_Y_T01864;Dbxref=GeneID:112445918,GenBank:XM_059884001.1;gbkey=mRNA;gene=LOC112445918;product=uncharacterized protein;transcript_id=Cattle_Y_T01864;gene_id=Cattle_Y_G01083;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884001.1-4
haplotype2-0000357	CAT	exon	57684968	57685541	.	+	.	ID=Cattle_Y_E04550;Parent=Cattle_Y_T01864;Dbxref=GeneID:112445918,GenBank:XM_059884001.1;gbkey=mRNA;gene=LOC112445918;product=uncharacterized protein;transcript_id=Cattle_Y_T01864;gene_id=Cattle_Y_G01083;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884001.1-5
haplotype2-0000357	CAT	exon	57692769	57692797	.	+	.	ID=Cattle_Y_E04551;Parent=Cattle_Y_T01864;Dbxref=GeneID:112445918,GenBank:XM_059884001.1;gbkey=mRNA;gene=LOC112445918;product=uncharacterized protein;transcript_id=Cattle_Y_T01864;gene_id=Cattle_Y_G01083;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884001.1-6
haplotype2-0000357	CAT	CDS	57683618	57683624	.	+	0	ID=Cattle_Y_C03964;Parent=Cattle_Y_T01864;Dbxref=GeneID:112445918,GenBank:XP_059739984.1;Name=XP_059739984.1;gbkey=CDS;gene=LOC112445918;product=uncharacterized protein;protein_id=XP_059739984.1;gene_id=Cattle_Y_G01083;transcript_id=Cattle_Y_T01864;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57683892	57683963	.	+	2	ID=Cattle_Y_C03965;Parent=Cattle_Y_T01864;Dbxref=GeneID:112445918,GenBank:XP_059739984.1;Name=XP_059739984.1;gbkey=CDS;gene=LOC112445918;product=uncharacterized protein;protein_id=XP_059739984.1;gene_id=Cattle_Y_G01083;transcript_id=Cattle_Y_T01864;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57684546	57684611	.	+	2	ID=Cattle_Y_C03966;Parent=Cattle_Y_T01864;Dbxref=GeneID:112445918,GenBank:XP_059739984.1;Name=XP_059739984.1;gbkey=CDS;gene=LOC112445918;product=uncharacterized protein;protein_id=XP_059739984.1;gene_id=Cattle_Y_G01083;transcript_id=Cattle_Y_T01864;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57684776	57684888	.	+	2	ID=Cattle_Y_C03967;Parent=Cattle_Y_T01864;Dbxref=GeneID:112445918,GenBank:XP_059739984.1;Name=XP_059739984.1;gbkey=CDS;gene=LOC112445918;product=uncharacterized protein;protein_id=XP_059739984.1;gene_id=Cattle_Y_G01083;transcript_id=Cattle_Y_T01864;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57684968	57685541	.	+	0	ID=Cattle_Y_C03968;Parent=Cattle_Y_T01864;Dbxref=GeneID:112445918,GenBank:XP_059739984.1;Name=XP_059739984.1;gbkey=CDS;gene=LOC112445918;product=uncharacterized protein;protein_id=XP_059739984.1;gene_id=Cattle_Y_G01083;transcript_id=Cattle_Y_T01864;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57692769	57692797	.	+	2	ID=Cattle_Y_C03969;Parent=Cattle_Y_T01864;Dbxref=GeneID:112445918,GenBank:XP_059739984.1;Name=XP_059739984.1;gbkey=CDS;gene=LOC112445918;product=uncharacterized protein;protein_id=XP_059739984.1;gene_id=Cattle_Y_G01083;transcript_id=Cattle_Y_T01864;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	57705577	57753395	.	+	.	ID=Cattle_Y_G01084;Dbxref=GeneID:132344462;Name=LOC132344462;description=P2Y purinoceptor 8;gbkey=Gene;gene=LOC132344462;gene_biotype=protein_coding;gene_id=Cattle_Y_G01084;source_id=gene-LOC132344462
haplotype2-0000357	CAT	mRNA	57705577	57753395	.	+	.	ID=Cattle_Y_T01865;Parent=Cattle_Y_G01084;Dbxref=GeneID:132344462,GenBank:XM_059884047.1;Name=XM_059884047.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344462;model_evidence=Supporting evidence includes similarity to: 3 ESTs%2C 2 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 35 samples with support for all annotated introns;product=P2Y purinoceptor 8%2C transcript variant X1;transcript_id=Cattle_Y_T01865;gene_id=Cattle_Y_G01084;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884047.1
haplotype2-0000357	CAT	exon	57705577	57705915	.	+	.	ID=Cattle_Y_E04552;Parent=Cattle_Y_T01865;Dbxref=GeneID:132344462,GenBank:XM_059884047.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344462;product=P2Y purinoceptor 8, transcript variant X1;transcript_id=Cattle_Y_T01865;gene_id=Cattle_Y_G01084;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884047.1-1
haplotype2-0000357	CAT	exon	57749770	57753395	.	+	.	ID=Cattle_Y_E04553;Parent=Cattle_Y_T01865;Dbxref=GeneID:132344462,GenBank:XM_059884047.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344462;product=P2Y purinoceptor 8, transcript variant X1;transcript_id=Cattle_Y_T01865;gene_id=Cattle_Y_G01084;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884047.1-2
haplotype2-0000357	CAT	CDS	57749812	57750876	.	+	0	ID=Cattle_Y_C03970;Parent=Cattle_Y_T01865;Dbxref=GeneID:132344462,GenBank:XP_059740030.1;Name=XP_059740030.1;gbkey=CDS;gene=LOC132344462;product=P2Y purinoceptor 8;protein_id=XP_059740030.1;gene_id=Cattle_Y_G01084;transcript_id=Cattle_Y_T01865;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57722562	57753395	.	+	.	ID=Cattle_Y_T01866;Parent=Cattle_Y_G01084;Dbxref=GeneID:132344462,GenBank:XM_059884048.1;Name=XM_059884048.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344462;model_evidence=Supporting evidence includes similarity to: 3 ESTs%2C 2 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 27 samples with support for all annotated introns;product=P2Y purinoceptor 8%2C transcript variant X2;transcript_id=Cattle_Y_T01866;gene_id=Cattle_Y_G01084;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884048.1
haplotype2-0000357	CAT	exon	57722562	57724998	.	+	.	ID=Cattle_Y_E04554;Parent=Cattle_Y_T01866;Dbxref=GeneID:132344462,GenBank:XM_059884048.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344462;product=P2Y purinoceptor 8, transcript variant X2;transcript_id=Cattle_Y_T01866;gene_id=Cattle_Y_G01084;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884048.1-1
haplotype2-0000357	CAT	exon	57749770	57753395	.	+	.	ID=Cattle_Y_E04555;Parent=Cattle_Y_T01866;Dbxref=GeneID:132344462,GenBank:XM_059884048.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344462;product=P2Y purinoceptor 8, transcript variant X2;transcript_id=Cattle_Y_T01866;gene_id=Cattle_Y_G01084;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884048.1-2
haplotype2-0000357	CAT	CDS	57749812	57750876	.	+	0	ID=Cattle_Y_C03971;Parent=Cattle_Y_T01866;Dbxref=GeneID:132344462,GenBank:XP_059740031.1;Name=XP_059740031.1;gbkey=CDS;gene=LOC132344462;product=P2Y purinoceptor 8;protein_id=XP_059740031.1;gene_id=Cattle_Y_G01084;transcript_id=Cattle_Y_T01866;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57705577	57753395	.	+	.	ID=Cattle_Y_T01867;Parent=Cattle_Y_G01084;Dbxref=GeneID:132344462,GenBank:XM_059884049.1;Name=XM_059884049.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344462;model_evidence=Supporting evidence includes similarity to: 3 ESTs%2C 2 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 18 samples with support for all annotated introns;product=P2Y purinoceptor 8%2C transcript variant X3;transcript_id=Cattle_Y_T01867;gene_id=Cattle_Y_G01084;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884049.1
haplotype2-0000357	CAT	exon	57705577	57705915	.	+	.	ID=Cattle_Y_E04556;Parent=Cattle_Y_T01867;Dbxref=GeneID:132344462,GenBank:XM_059884049.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344462;product=P2Y purinoceptor 8, transcript variant X3;transcript_id=Cattle_Y_T01867;gene_id=Cattle_Y_G01084;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884049.1-1
haplotype2-0000357	CAT	exon	57729791	57730132	.	+	.	ID=Cattle_Y_E04557;Parent=Cattle_Y_T01867;Dbxref=GeneID:132344462,GenBank:XM_059884049.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344462;product=P2Y purinoceptor 8, transcript variant X3;transcript_id=Cattle_Y_T01867;gene_id=Cattle_Y_G01084;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884049.1-2
haplotype2-0000357	CAT	exon	57749770	57753395	.	+	.	ID=Cattle_Y_E04558;Parent=Cattle_Y_T01867;Dbxref=GeneID:132344462,GenBank:XM_059884049.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344462;product=P2Y purinoceptor 8, transcript variant X3;transcript_id=Cattle_Y_T01867;gene_id=Cattle_Y_G01084;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884049.1-3
haplotype2-0000357	CAT	CDS	57749812	57750876	.	+	0	ID=Cattle_Y_C03972;Parent=Cattle_Y_T01867;Dbxref=GeneID:132344462,GenBank:XP_059740032.1;Name=XP_059740032.1;gbkey=CDS;gene=LOC132344462;product=P2Y purinoceptor 8;protein_id=XP_059740032.1;gene_id=Cattle_Y_G01084;transcript_id=Cattle_Y_T01867;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57722562	57753395	.	+	.	ID=Cattle_Y_T01868;Parent=Cattle_Y_G01084;Dbxref=GeneID:132344462,GenBank:XM_059884050.1;Name=XM_059884050.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344462;model_evidence=Supporting evidence includes similarity to: 3 ESTs%2C 2 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 12 samples with support for all annotated introns;product=P2Y purinoceptor 8%2C transcript variant X4;transcript_id=Cattle_Y_T01868;gene_id=Cattle_Y_G01084;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884050.1
haplotype2-0000357	CAT	exon	57722562	57724998	.	+	.	ID=Cattle_Y_E04559;Parent=Cattle_Y_T01868;Dbxref=GeneID:132344462,GenBank:XM_059884050.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344462;product=P2Y purinoceptor 8, transcript variant X4;transcript_id=Cattle_Y_T01868;gene_id=Cattle_Y_G01084;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884050.1-1
haplotype2-0000357	CAT	exon	57729791	57730132	.	+	.	ID=Cattle_Y_E04560;Parent=Cattle_Y_T01868;Dbxref=GeneID:132344462,GenBank:XM_059884050.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344462;product=P2Y purinoceptor 8, transcript variant X4;transcript_id=Cattle_Y_T01868;gene_id=Cattle_Y_G01084;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884050.1-2
haplotype2-0000357	CAT	exon	57749770	57753395	.	+	.	ID=Cattle_Y_E04561;Parent=Cattle_Y_T01868;Dbxref=GeneID:132344462,GenBank:XM_059884050.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344462;product=P2Y purinoceptor 8, transcript variant X4;transcript_id=Cattle_Y_T01868;gene_id=Cattle_Y_G01084;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884050.1-3
haplotype2-0000357	CAT	CDS	57749812	57750876	.	+	0	ID=Cattle_Y_C03973;Parent=Cattle_Y_T01868;Dbxref=GeneID:132344462,GenBank:XP_059740033.1;Name=XP_059740033.1;gbkey=CDS;gene=LOC132344462;product=P2Y purinoceptor 8;protein_id=XP_059740033.1;gene_id=Cattle_Y_G01084;transcript_id=Cattle_Y_T01868;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57736173	57753395	.	+	.	ID=Cattle_Y_T01869;Parent=Cattle_Y_G01084;Dbxref=GeneID:132344462,GenBank:XM_059884051.1;Name=XM_059884051.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344462;model_evidence=Supporting evidence includes similarity to: 3 ESTs%2C 2 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 12 samples with support for all annotated introns;product=P2Y purinoceptor 8%2C transcript variant X5;transcript_id=Cattle_Y_T01869;gene_id=Cattle_Y_G01084;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884051.1
haplotype2-0000357	CAT	exon	57736173	57739550	.	+	.	ID=Cattle_Y_E04562;Parent=Cattle_Y_T01869;Dbxref=GeneID:132344462,GenBank:XM_059884051.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344462;product=P2Y purinoceptor 8, transcript variant X5;transcript_id=Cattle_Y_T01869;gene_id=Cattle_Y_G01084;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884051.1-1
haplotype2-0000357	CAT	exon	57749770	57753395	.	+	.	ID=Cattle_Y_E04563;Parent=Cattle_Y_T01869;Dbxref=GeneID:132344462,GenBank:XM_059884051.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344462;product=P2Y purinoceptor 8, transcript variant X5;transcript_id=Cattle_Y_T01869;gene_id=Cattle_Y_G01084;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884051.1-2
haplotype2-0000357	CAT	CDS	57749812	57750876	.	+	0	ID=Cattle_Y_C03974;Parent=Cattle_Y_T01869;Dbxref=GeneID:132344462,GenBank:XP_059740034.1;Name=XP_059740034.1;gbkey=CDS;gene=LOC132344462;product=P2Y purinoceptor 8;protein_id=XP_059740034.1;gene_id=Cattle_Y_G01084;transcript_id=Cattle_Y_T01869;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	57755951	57776098	.	+	.	ID=Cattle_Y_G01085;Dbxref=GeneID:132344461;Name=LOC132344461;description=probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein;gbkey=Gene;gene=LOC132344461;gene_biotype=protein_coding;gene_id=Cattle_Y_G01085;source_id=gene-LOC132344461
haplotype2-0000357	CAT	mRNA	57755951	57776098	.	+	.	ID=Cattle_Y_T01870;Parent=Cattle_Y_G01085;Dbxref=GeneID:132344461,GenBank:XM_059884043.1;Name=XM_059884043.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344461;model_evidence=Supporting evidence includes similarity to: 1 mRNA%2C 33 ESTs%2C 2 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 57 samples with support for all annotated introns;product=probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein;transcript_id=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884043.1
haplotype2-0000357	CAT	exon	57755951	57756094	.	+	.	ID=Cattle_Y_E04564;Parent=Cattle_Y_T01870;Dbxref=GeneID:132344461,GenBank:XM_059884043.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344461;product=probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein;transcript_id=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884043.1-1
haplotype2-0000357	CAT	exon	57757644	57757775	.	+	.	ID=Cattle_Y_E04565;Parent=Cattle_Y_T01870;Dbxref=GeneID:132344461,GenBank:XM_059884043.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344461;product=probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein;transcript_id=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884043.1-1
haplotype2-0000357	CAT	exon	57759016	57759063	.	+	.	ID=Cattle_Y_E04566;Parent=Cattle_Y_T01870;Dbxref=GeneID:132344461,GenBank:XM_059884043.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344461;product=probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein;transcript_id=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884043.1-1
haplotype2-0000357	CAT	exon	57761387	57761451	.	+	.	ID=Cattle_Y_E04567;Parent=Cattle_Y_T01870;Dbxref=GeneID:132344461,GenBank:XM_059884043.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344461;product=probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein;transcript_id=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884043.1-1
haplotype2-0000357	CAT	exon	57762070	57762131	.	+	.	ID=Cattle_Y_E04568;Parent=Cattle_Y_T01870;Dbxref=GeneID:132344461,GenBank:XM_059884043.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344461;product=probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein;transcript_id=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884043.1-1
haplotype2-0000357	CAT	exon	57763390	57763498	.	+	.	ID=Cattle_Y_E04569;Parent=Cattle_Y_T01870;Dbxref=GeneID:132344461,GenBank:XM_059884043.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344461;product=probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein;transcript_id=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884043.1-1
haplotype2-0000357	CAT	exon	57764701	57765082	.	+	.	ID=Cattle_Y_E04570;Parent=Cattle_Y_T01870;Dbxref=GeneID:132344461,GenBank:XM_059884043.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344461;product=probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein;transcript_id=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884043.1-1
haplotype2-0000357	CAT	exon	57766008	57766170	.	+	.	ID=Cattle_Y_E04571;Parent=Cattle_Y_T01870;Dbxref=GeneID:132344461,GenBank:XM_059884043.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344461;product=probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein;transcript_id=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884043.1-1
haplotype2-0000357	CAT	exon	57768964	57769127	.	+	.	ID=Cattle_Y_E04572;Parent=Cattle_Y_T01870;Dbxref=GeneID:132344461,GenBank:XM_059884043.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344461;product=probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein;transcript_id=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884043.1-1
haplotype2-0000357	CAT	exon	57770367	57770499	.	+	.	ID=Cattle_Y_E04573;Parent=Cattle_Y_T01870;Dbxref=GeneID:132344461,GenBank:XM_059884043.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344461;product=probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein;transcript_id=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884043.1-1
haplotype2-0000357	CAT	exon	57771501	57771644	.	+	.	ID=Cattle_Y_E04574;Parent=Cattle_Y_T01870;Dbxref=GeneID:132344461,GenBank:XM_059884043.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344461;product=probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein;transcript_id=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884043.1-1
haplotype2-0000357	CAT	exon	57775053	57775175	.	+	.	ID=Cattle_Y_E04575;Parent=Cattle_Y_T01870;Dbxref=GeneID:132344461,GenBank:XM_059884043.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344461;product=probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein;transcript_id=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884043.1-1
haplotype2-0000357	CAT	exon	57775777	57776098	.	+	.	ID=Cattle_Y_E04576;Parent=Cattle_Y_T01870;Dbxref=GeneID:132344461,GenBank:XM_059884043.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344461;product=probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein;transcript_id=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884043.1-13
haplotype2-0000357	CAT	CDS	57756002	57756094	.	+	0	ID=Cattle_Y_C03975;Parent=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;transcript_id=Cattle_Y_T01870;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57757644	57757775	.	+	0	ID=Cattle_Y_C03976;Parent=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;transcript_id=Cattle_Y_T01870;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57759016	57759063	.	+	0	ID=Cattle_Y_C03977;Parent=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;transcript_id=Cattle_Y_T01870;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57761387	57761451	.	+	0	ID=Cattle_Y_C03978;Parent=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;transcript_id=Cattle_Y_T01870;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57762070	57762131	.	+	1	ID=Cattle_Y_C03979;Parent=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;transcript_id=Cattle_Y_T01870;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57763390	57763498	.	+	2	ID=Cattle_Y_C03980;Parent=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;transcript_id=Cattle_Y_T01870;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57764701	57765082	.	+	1	ID=Cattle_Y_C03981;Parent=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;transcript_id=Cattle_Y_T01870;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57766008	57766170	.	+	0	ID=Cattle_Y_C03982;Parent=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;transcript_id=Cattle_Y_T01870;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57768964	57769127	.	+	2	ID=Cattle_Y_C03983;Parent=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;transcript_id=Cattle_Y_T01870;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57770367	57770499	.	+	0	ID=Cattle_Y_C03984;Parent=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;transcript_id=Cattle_Y_T01870;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57771501	57771644	.	+	2	ID=Cattle_Y_C03985;Parent=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;transcript_id=Cattle_Y_T01870;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57775053	57775175	.	+	2	ID=Cattle_Y_C03986;Parent=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;transcript_id=Cattle_Y_T01870;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57775777	57775997	.	+	2	ID=Cattle_Y_C03987;Parent=Cattle_Y_T01870;gene_id=Cattle_Y_G01085;transcript_id=Cattle_Y_T01870;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	57781471	57785995	.	+	.	ID=Cattle_Y_G01086;Dbxref=GeneID:132344463;Name=LOC132344463;description=ADP/ATP translocase 3;gbkey=Gene;gene=LOC132344463;gene_biotype=protein_coding;gene_id=Cattle_Y_G01086;source_id=gene-LOC132344463
haplotype2-0000357	CAT	mRNA	57781471	57785995	.	+	.	ID=Cattle_Y_T01871;Parent=Cattle_Y_G01086;Dbxref=GeneID:132344463,GenBank:XM_059884052.1;Name=XM_059884052.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344463;model_evidence=Supporting evidence includes similarity to: 812 ESTs%2C 24 Proteins%2C 138 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 167 samples with support for all annotated introns;product=ADP/ATP translocase 3;transcript_id=Cattle_Y_T01871;gene_id=Cattle_Y_G01086;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884052.1
haplotype2-0000357	CAT	exon	57781471	57781680	.	+	.	ID=Cattle_Y_E04577;Parent=Cattle_Y_T01871;Dbxref=GeneID:132344463,GenBank:XM_059884052.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344463;product=ADP/ATP translocase 3;transcript_id=Cattle_Y_T01871;gene_id=Cattle_Y_G01086;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884052.1-1
haplotype2-0000357	CAT	exon	57783371	57783857	.	+	.	ID=Cattle_Y_E04578;Parent=Cattle_Y_T01871;Dbxref=GeneID:132344463,GenBank:XM_059884052.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344463;product=ADP/ATP translocase 3;transcript_id=Cattle_Y_T01871;gene_id=Cattle_Y_G01086;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884052.1-2
haplotype2-0000357	CAT	exon	57784835	57784975	.	+	.	ID=Cattle_Y_E04579;Parent=Cattle_Y_T01871;Dbxref=GeneID:132344463,GenBank:XM_059884052.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344463;product=ADP/ATP translocase 3;transcript_id=Cattle_Y_T01871;gene_id=Cattle_Y_G01086;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884052.1-3
haplotype2-0000357	CAT	exon	57785447	57785995	.	+	.	ID=Cattle_Y_E04580;Parent=Cattle_Y_T01871;Dbxref=GeneID:132344463,GenBank:XM_059884052.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132344463;product=ADP/ATP translocase 3;transcript_id=Cattle_Y_T01871;gene_id=Cattle_Y_G01086;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884052.1-4
haplotype2-0000357	CAT	CDS	57781570	57781680	.	+	0	ID=Cattle_Y_C03988;Parent=Cattle_Y_T01871;Dbxref=GeneID:132344463,GenBank:XP_059740035.1;Name=XP_059740035.1;gbkey=CDS;gene=LOC132344463;product=ADP/ATP translocase 3;protein_id=XP_059740035.1;gene_id=Cattle_Y_G01086;transcript_id=Cattle_Y_T01871;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57783371	57783857	.	+	0	ID=Cattle_Y_C03989;Parent=Cattle_Y_T01871;Dbxref=GeneID:132344463,GenBank:XP_059740035.1;Name=XP_059740035.1;gbkey=CDS;gene=LOC132344463;product=ADP/ATP translocase 3;protein_id=XP_059740035.1;gene_id=Cattle_Y_G01086;transcript_id=Cattle_Y_T01871;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57784835	57784975	.	+	2	ID=Cattle_Y_C03990;Parent=Cattle_Y_T01871;Dbxref=GeneID:132344463,GenBank:XP_059740035.1;Name=XP_059740035.1;gbkey=CDS;gene=LOC132344463;product=ADP/ATP translocase 3;protein_id=XP_059740035.1;gene_id=Cattle_Y_G01086;transcript_id=Cattle_Y_T01871;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57785447	57785604	.	+	2	ID=Cattle_Y_C03991;Parent=Cattle_Y_T01871;Dbxref=GeneID:132344463,GenBank:XP_059740035.1;Name=XP_059740035.1;gbkey=CDS;gene=LOC132344463;product=ADP/ATP translocase 3;protein_id=XP_059740035.1;gene_id=Cattle_Y_G01086;transcript_id=Cattle_Y_T01871;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	57788122	57807247	.	-	.	ID=Cattle_Y_G01087;Dbxref=GeneID:100299249,VGNC:VGNC:106780;Name=IL3RA;description=interleukin 3 receptor subunit alpha;gbkey=Gene;gene=IL3RA;gene_biotype=protein_coding;gene_id=Cattle_Y_G01087;source_id=gene-IL3RA
haplotype2-0000357	CAT	mRNA	57788122	57807247	.	-	.	ID=Cattle_Y_T01872;Parent=Cattle_Y_G01087;Dbxref=GeneID:100299249,GenBank:XM_024990300.2,VGNC:VGNC:106780;Name=XM_024990300.2;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=IL3RA;model_evidence=Supporting evidence includes similarity to: 3 ESTs%2C 3 long SRA reads%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 27 samples with support for all annotated introns;product=interleukin 3 receptor subunit alpha%2C transcript variant X3;transcript_id=Cattle_Y_T01872;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_024990300.2
haplotype2-0000357	CAT	exon	57788122	57788464	.	-	.	ID=Cattle_Y_E04581;Parent=Cattle_Y_T01872;Dbxref=GeneID:100299249,GenBank:XM_024990300.2,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01872;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024990300.2-12
haplotype2-0000357	CAT	exon	57788777	57788858	.	-	.	ID=Cattle_Y_E04582;Parent=Cattle_Y_T01872;Dbxref=GeneID:100299249,GenBank:XM_024990300.2,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01872;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024990300.2-12
haplotype2-0000357	CAT	exon	57790363	57790462	.	-	.	ID=Cattle_Y_E04583;Parent=Cattle_Y_T01872;Dbxref=GeneID:100299249,GenBank:XM_024990300.2,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01872;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024990300.2-12
haplotype2-0000357	CAT	exon	57792022	57792142	.	-	.	ID=Cattle_Y_E04584;Parent=Cattle_Y_T01872;Dbxref=GeneID:100299249,GenBank:XM_024990300.2,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01872;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024990300.2-12
haplotype2-0000357	CAT	exon	57792730	57792756	.	-	.	ID=Cattle_Y_E04585;Parent=Cattle_Y_T01872;Dbxref=GeneID:100299249,GenBank:XM_024990300.2,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01872;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024990300.2-12
haplotype2-0000357	CAT	exon	57794489	57794607	.	-	.	ID=Cattle_Y_E04586;Parent=Cattle_Y_T01872;Dbxref=GeneID:100299249,GenBank:XM_024990300.2,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01872;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024990300.2-12
haplotype2-0000357	CAT	exon	57795347	57795525	.	-	.	ID=Cattle_Y_E04587;Parent=Cattle_Y_T01872;Dbxref=GeneID:100299249,GenBank:XM_024990300.2,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01872;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024990300.2-12
haplotype2-0000357	CAT	exon	57795907	57796036	.	-	.	ID=Cattle_Y_E04588;Parent=Cattle_Y_T01872;Dbxref=GeneID:100299249,GenBank:XM_024990300.2,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01872;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024990300.2-12
haplotype2-0000357	CAT	exon	57796747	57796861	.	-	.	ID=Cattle_Y_E04589;Parent=Cattle_Y_T01872;Dbxref=GeneID:100299249,GenBank:XM_024990300.2,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01872;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024990300.2-12
haplotype2-0000357	CAT	exon	57797398	57797525	.	-	.	ID=Cattle_Y_E04590;Parent=Cattle_Y_T01872;Dbxref=GeneID:100299249,GenBank:XM_024990300.2,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01872;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024990300.2-12
haplotype2-0000357	CAT	exon	57803091	57803189	.	-	.	ID=Cattle_Y_E04591;Parent=Cattle_Y_T01872;Dbxref=GeneID:100299249,GenBank:XM_024990300.2,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01872;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024990300.2-2
haplotype2-0000357	CAT	exon	57807088	57807247	.	-	.	ID=Cattle_Y_E04592;Parent=Cattle_Y_T01872;Dbxref=GeneID:100299249,GenBank:XM_024990300.2,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01872;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024990300.2-1
haplotype2-0000357	CAT	CDS	57788390	57788464	.	-	0	ID=Cattle_Y_C03992;Parent=Cattle_Y_T01872;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01872;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57788777	57788858	.	-	1	ID=Cattle_Y_C03993;Parent=Cattle_Y_T01872;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01872;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57790363	57790462	.	-	2	ID=Cattle_Y_C03994;Parent=Cattle_Y_T01872;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01872;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57792022	57792142	.	-	0	ID=Cattle_Y_C03995;Parent=Cattle_Y_T01872;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01872;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57792730	57792756	.	-	0	ID=Cattle_Y_C03996;Parent=Cattle_Y_T01872;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01872;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57794489	57794607	.	-	2	ID=Cattle_Y_C03997;Parent=Cattle_Y_T01872;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01872;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57795347	57795525	.	-	1	ID=Cattle_Y_C03998;Parent=Cattle_Y_T01872;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01872;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57795907	57796036	.	-	2	ID=Cattle_Y_C03999;Parent=Cattle_Y_T01872;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01872;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57796747	57796861	.	-	0	ID=Cattle_Y_C04000;Parent=Cattle_Y_T01872;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01872;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57797398	57797525	.	-	2	ID=Cattle_Y_C04001;Parent=Cattle_Y_T01872;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01872;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57803091	57803154	.	-	0	ID=Cattle_Y_C04002;Parent=Cattle_Y_T01872;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01872;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57789305	57807247	.	-	.	ID=Cattle_Y_T01873;Parent=Cattle_Y_G01087;Dbxref=GeneID:100299249,GenBank:XM_059884044.1,VGNC:VGNC:106780;Name=XM_059884044.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=IL3RA;model_evidence=Supporting evidence includes similarity to: 2 ESTs%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 8 samples with support for all annotated introns;product=interleukin 3 receptor subunit alpha%2C transcript variant X1;transcript_id=Cattle_Y_T01873;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884044.1
haplotype2-0000357	CAT	exon	57789305	57789901	.	-	.	ID=Cattle_Y_E04593;Parent=Cattle_Y_T01873;Dbxref=GeneID:100299249,GenBank:XM_059884044.1,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01873;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884044.1-11
haplotype2-0000357	CAT	exon	57790363	57790462	.	-	.	ID=Cattle_Y_E04594;Parent=Cattle_Y_T01873;Dbxref=GeneID:100299249,GenBank:XM_059884044.1,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01873;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884044.1-11
haplotype2-0000357	CAT	exon	57792022	57792142	.	-	.	ID=Cattle_Y_E04595;Parent=Cattle_Y_T01873;Dbxref=GeneID:100299249,GenBank:XM_059884044.1,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01873;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884044.1-11
haplotype2-0000357	CAT	exon	57792730	57792756	.	-	.	ID=Cattle_Y_E04596;Parent=Cattle_Y_T01873;Dbxref=GeneID:100299249,GenBank:XM_059884044.1,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01873;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884044.1-11
haplotype2-0000357	CAT	exon	57794489	57794607	.	-	.	ID=Cattle_Y_E04597;Parent=Cattle_Y_T01873;Dbxref=GeneID:100299249,GenBank:XM_059884044.1,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01873;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884044.1-11
haplotype2-0000357	CAT	exon	57795347	57795525	.	-	.	ID=Cattle_Y_E04598;Parent=Cattle_Y_T01873;Dbxref=GeneID:100299249,GenBank:XM_059884044.1,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01873;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884044.1-11
haplotype2-0000357	CAT	exon	57795907	57796036	.	-	.	ID=Cattle_Y_E04599;Parent=Cattle_Y_T01873;Dbxref=GeneID:100299249,GenBank:XM_059884044.1,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01873;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884044.1-11
haplotype2-0000357	CAT	exon	57796747	57796861	.	-	.	ID=Cattle_Y_E04600;Parent=Cattle_Y_T01873;Dbxref=GeneID:100299249,GenBank:XM_059884044.1,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01873;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884044.1-11
haplotype2-0000357	CAT	exon	57797398	57797525	.	-	.	ID=Cattle_Y_E04601;Parent=Cattle_Y_T01873;Dbxref=GeneID:100299249,GenBank:XM_059884044.1,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01873;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884044.1-11
haplotype2-0000357	CAT	exon	57803091	57803189	.	-	.	ID=Cattle_Y_E04602;Parent=Cattle_Y_T01873;Dbxref=GeneID:100299249,GenBank:XM_059884044.1,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01873;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884044.1-2
haplotype2-0000357	CAT	exon	57807088	57807247	.	-	.	ID=Cattle_Y_E04603;Parent=Cattle_Y_T01873;Dbxref=GeneID:100299249,GenBank:XM_059884044.1,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01873;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884044.1-1
haplotype2-0000357	CAT	CDS	57789673	57789901	.	-	1	ID=Cattle_Y_C04003;Parent=Cattle_Y_T01873;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01873;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57790363	57790462	.	-	2	ID=Cattle_Y_C04004;Parent=Cattle_Y_T01873;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01873;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57792022	57792142	.	-	0	ID=Cattle_Y_C04005;Parent=Cattle_Y_T01873;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01873;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57792730	57792756	.	-	0	ID=Cattle_Y_C04006;Parent=Cattle_Y_T01873;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01873;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57794489	57794607	.	-	2	ID=Cattle_Y_C04007;Parent=Cattle_Y_T01873;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01873;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57795347	57795525	.	-	1	ID=Cattle_Y_C04008;Parent=Cattle_Y_T01873;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01873;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57795907	57796036	.	-	2	ID=Cattle_Y_C04009;Parent=Cattle_Y_T01873;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01873;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57796747	57796861	.	-	0	ID=Cattle_Y_C04010;Parent=Cattle_Y_T01873;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01873;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57797398	57797525	.	-	2	ID=Cattle_Y_C04011;Parent=Cattle_Y_T01873;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01873;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57803091	57803154	.	-	0	ID=Cattle_Y_C04012;Parent=Cattle_Y_T01873;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01873;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57789296	57807247	.	-	.	ID=Cattle_Y_T01874;Parent=Cattle_Y_G01087;Dbxref=GeneID:100299249,GenBank:XM_059884045.1,VGNC:VGNC:106780;Name=XM_059884045.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=IL3RA;model_evidence=Supporting evidence includes similarity to: 2 ESTs%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 5 samples with support for all annotated introns;product=interleukin 3 receptor subunit alpha%2C transcript variant X2;transcript_id=Cattle_Y_T01874;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884045.1
haplotype2-0000357	CAT	exon	57789296	57789901	.	-	.	ID=Cattle_Y_E04604;Parent=Cattle_Y_T01874;Dbxref=GeneID:100299249,GenBank:XM_059884045.1,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01874;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884045.1-11
haplotype2-0000357	CAT	exon	57790363	57790462	.	-	.	ID=Cattle_Y_E04605;Parent=Cattle_Y_T01874;Dbxref=GeneID:100299249,GenBank:XM_059884045.1,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01874;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884045.1-11
haplotype2-0000357	CAT	exon	57792022	57792142	.	-	.	ID=Cattle_Y_E04606;Parent=Cattle_Y_T01874;Dbxref=GeneID:100299249,GenBank:XM_059884045.1,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01874;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884045.1-11
haplotype2-0000357	CAT	exon	57792730	57792756	.	-	.	ID=Cattle_Y_E04607;Parent=Cattle_Y_T01874;Dbxref=GeneID:100299249,GenBank:XM_059884045.1,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01874;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884045.1-11
haplotype2-0000357	CAT	exon	57794489	57794607	.	-	.	ID=Cattle_Y_E04608;Parent=Cattle_Y_T01874;Dbxref=GeneID:100299249,GenBank:XM_059884045.1,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01874;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884045.1-11
haplotype2-0000357	CAT	exon	57795347	57795456	.	-	.	ID=Cattle_Y_E04609;Parent=Cattle_Y_T01874;Dbxref=GeneID:100299249,GenBank:XM_059884045.1,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01874;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884045.1-11
haplotype2-0000357	CAT	exon	57795907	57796036	.	-	.	ID=Cattle_Y_E04610;Parent=Cattle_Y_T01874;Dbxref=GeneID:100299249,GenBank:XM_059884045.1,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01874;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884045.1-11
haplotype2-0000357	CAT	exon	57796747	57796861	.	-	.	ID=Cattle_Y_E04611;Parent=Cattle_Y_T01874;Dbxref=GeneID:100299249,GenBank:XM_059884045.1,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01874;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884045.1-11
haplotype2-0000357	CAT	exon	57797398	57797525	.	-	.	ID=Cattle_Y_E04612;Parent=Cattle_Y_T01874;Dbxref=GeneID:100299249,GenBank:XM_059884045.1,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01874;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884045.1-11
haplotype2-0000357	CAT	exon	57803091	57803189	.	-	.	ID=Cattle_Y_E04613;Parent=Cattle_Y_T01874;Dbxref=GeneID:100299249,GenBank:XM_059884045.1,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01874;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884045.1-2
haplotype2-0000357	CAT	exon	57807088	57807247	.	-	.	ID=Cattle_Y_E04614;Parent=Cattle_Y_T01874;Dbxref=GeneID:100299249,GenBank:XM_059884045.1,VGNC:VGNC:106780;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01874;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884045.1-1
haplotype2-0000357	CAT	CDS	57789673	57789901	.	-	1	ID=Cattle_Y_C04013;Parent=Cattle_Y_T01874;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01874;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57790363	57790462	.	-	2	ID=Cattle_Y_C04014;Parent=Cattle_Y_T01874;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01874;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57792022	57792142	.	-	0	ID=Cattle_Y_C04015;Parent=Cattle_Y_T01874;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01874;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57792730	57792756	.	-	0	ID=Cattle_Y_C04016;Parent=Cattle_Y_T01874;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01874;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57794489	57794607	.	-	2	ID=Cattle_Y_C04017;Parent=Cattle_Y_T01874;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01874;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57795347	57795456	.	-	1	ID=Cattle_Y_C04018;Parent=Cattle_Y_T01874;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01874;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57795907	57796036	.	-	2	ID=Cattle_Y_C04019;Parent=Cattle_Y_T01874;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01874;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57796747	57796861	.	-	0	ID=Cattle_Y_C04020;Parent=Cattle_Y_T01874;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01874;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57797398	57797525	.	-	2	ID=Cattle_Y_C04021;Parent=Cattle_Y_T01874;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01874;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57803091	57803154	.	-	0	ID=Cattle_Y_C04022;Parent=Cattle_Y_T01874;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01874;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57789273	57794482	.	-	.	ID=Cattle_Y_T01875;Parent=Cattle_Y_G01087;Dbxref=GeneID:100299249,GenBank:XM_059884046.1,VGNC:VGNC:106780;Name=XM_059884046.1;gbkey=mRNA;gene=IL3RA;model_evidence=Supporting evidence includes similarity to: 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 8 samples with support for all annotated introns;product=interleukin 3 receptor subunit alpha%2C transcript variant X4;transcript_id=Cattle_Y_T01875;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884046.1
haplotype2-0000357	CAT	exon	57789273	57789901	.	-	.	ID=Cattle_Y_E04615;Parent=Cattle_Y_T01875;Dbxref=GeneID:100299249,GenBank:XM_059884046.1,VGNC:VGNC:106780;gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01875;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884046.1-5
haplotype2-0000357	CAT	exon	57790363	57790462	.	-	.	ID=Cattle_Y_E04616;Parent=Cattle_Y_T01875;Dbxref=GeneID:100299249,GenBank:XM_059884046.1,VGNC:VGNC:106780;gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01875;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884046.1-5
haplotype2-0000357	CAT	exon	57792022	57792142	.	-	.	ID=Cattle_Y_E04617;Parent=Cattle_Y_T01875;Dbxref=GeneID:100299249,GenBank:XM_059884046.1,VGNC:VGNC:106780;gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01875;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884046.1-5
haplotype2-0000357	CAT	exon	57792730	57792756	.	-	.	ID=Cattle_Y_E04618;Parent=Cattle_Y_T01875;Dbxref=GeneID:100299249,GenBank:XM_059884046.1,VGNC:VGNC:106780;gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01875;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884046.1-5
haplotype2-0000357	CAT	exon	57792862	57794482	.	-	.	ID=Cattle_Y_E04619;Parent=Cattle_Y_T01875;Dbxref=GeneID:100299249,GenBank:XM_059884046.1,VGNC:VGNC:106780;gbkey=mRNA;gene=IL3RA;product=interleukin 3 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01875;gene_id=Cattle_Y_G01087;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884046.1-1
haplotype2-0000357	CAT	CDS	57789673	57789901	.	-	1	ID=Cattle_Y_C04023;Parent=Cattle_Y_T01875;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01875;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57790363	57790462	.	-	2	ID=Cattle_Y_C04024;Parent=Cattle_Y_T01875;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01875;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57792022	57792142	.	-	0	ID=Cattle_Y_C04025;Parent=Cattle_Y_T01875;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01875;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57792730	57792756	.	-	0	ID=Cattle_Y_C04026;Parent=Cattle_Y_T01875;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01875;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57792862	57793344	.	-	0	ID=Cattle_Y_C04027;Parent=Cattle_Y_T01875;gene_id=Cattle_Y_G01087;transcript_id=Cattle_Y_T01875;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	57812956	57879601	.	-	.	ID=Cattle_Y_G01088;Dbxref=GeneID:100336606,VGNC:VGNC:55042;Name=CSF2RA;description=colony stimulating factor 2 receptor subunit alpha;gbkey=Gene;gene=CSF2RA;gene_biotype=protein_coding;gene_id=Cattle_Y_G01088;source_id=gene-CSF2RA
haplotype2-0000357	CAT	mRNA	57812956	57868288	.	-	.	ID=Cattle_Y_T01876;Parent=Cattle_Y_G01088;Dbxref=GeneID:100336606,GenBank:XM_059884028.1,VGNC:VGNC:55042;Name=XM_059884028.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;model_evidence=Supporting evidence includes similarity to: 23 ESTs%2C 8 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 6 samples with support for all annotated introns;product=colony stimulating factor 2 receptor subunit alpha%2C transcript variant X1;transcript_id=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884028.1
haplotype2-0000357	CAT	exon	57812956	57814842	.	-	.	ID=Cattle_Y_E04620;Parent=Cattle_Y_T01876;Dbxref=GeneID:100336606,GenBank:XM_059884028.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884028.1-23
haplotype2-0000357	CAT	exon	57817972	57818053	.	-	.	ID=Cattle_Y_E04621;Parent=Cattle_Y_T01876;Dbxref=GeneID:100336606,GenBank:XM_059884028.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884028.1-23
haplotype2-0000357	CAT	exon	57819991	57820084	.	-	.	ID=Cattle_Y_E04622;Parent=Cattle_Y_T01876;Dbxref=GeneID:100336606,GenBank:XM_059884028.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884028.1-23
haplotype2-0000357	CAT	exon	57820331	57820426	.	-	.	ID=Cattle_Y_E04623;Parent=Cattle_Y_T01876;Dbxref=GeneID:100336606,GenBank:XM_059884028.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884028.1-23
haplotype2-0000357	CAT	exon	57820961	57821096	.	-	.	ID=Cattle_Y_E04624;Parent=Cattle_Y_T01876;Dbxref=GeneID:100336606,GenBank:XM_059884028.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884028.1-23
haplotype2-0000357	CAT	exon	57823050	57823073	.	-	.	ID=Cattle_Y_E04625;Parent=Cattle_Y_T01876;Dbxref=GeneID:100336606,GenBank:XM_059884028.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884028.1-23
haplotype2-0000357	CAT	exon	57824616	57824749	.	-	.	ID=Cattle_Y_E04626;Parent=Cattle_Y_T01876;Dbxref=GeneID:100336606,GenBank:XM_059884028.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884028.1-23
haplotype2-0000357	CAT	exon	57826682	57826866	.	-	.	ID=Cattle_Y_E04627;Parent=Cattle_Y_T01876;Dbxref=GeneID:100336606,GenBank:XM_059884028.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884028.1-23
haplotype2-0000357	CAT	exon	57828246	57828375	.	-	.	ID=Cattle_Y_E04628;Parent=Cattle_Y_T01876;Dbxref=GeneID:100336606,GenBank:XM_059884028.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884028.1-23
haplotype2-0000357	CAT	exon	57828492	57828615	.	-	.	ID=Cattle_Y_E04629;Parent=Cattle_Y_T01876;Dbxref=GeneID:100336606,GenBank:XM_059884028.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884028.1-23
haplotype2-0000357	CAT	exon	57830367	57830509	.	-	.	ID=Cattle_Y_E04630;Parent=Cattle_Y_T01876;Dbxref=GeneID:100336606,GenBank:XM_059884028.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884028.1-23
haplotype2-0000357	CAT	exon	57835096	57835180	.	-	.	ID=Cattle_Y_E04631;Parent=Cattle_Y_T01876;Dbxref=GeneID:100336606,GenBank:XM_059884028.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884028.1-23
haplotype2-0000357	CAT	exon	57847117	57847198	.	-	.	ID=Cattle_Y_E04632;Parent=Cattle_Y_T01876;Dbxref=GeneID:100336606,GenBank:XM_059884028.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884028.1-23
haplotype2-0000357	CAT	exon	57852854	57852950	.	-	.	ID=Cattle_Y_E04633;Parent=Cattle_Y_T01876;Dbxref=GeneID:100336606,GenBank:XM_059884028.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884028.1-23
haplotype2-0000357	CAT	exon	57855125	57855260	.	-	.	ID=Cattle_Y_E04634;Parent=Cattle_Y_T01876;Dbxref=GeneID:100336606,GenBank:XM_059884028.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884028.1-23
haplotype2-0000357	CAT	exon	57856418	57856447	.	-	.	ID=Cattle_Y_E04635;Parent=Cattle_Y_T01876;Dbxref=GeneID:100336606,GenBank:XM_059884028.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884028.1-23
haplotype2-0000357	CAT	exon	57857132	57857265	.	-	.	ID=Cattle_Y_E04636;Parent=Cattle_Y_T01876;Dbxref=GeneID:100336606,GenBank:XM_059884028.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884028.1-23
haplotype2-0000357	CAT	exon	57857664	57857836	.	-	.	ID=Cattle_Y_E04637;Parent=Cattle_Y_T01876;Dbxref=GeneID:100336606,GenBank:XM_059884028.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884028.1-23
haplotype2-0000357	CAT	exon	57857930	57858056	.	-	.	ID=Cattle_Y_E04638;Parent=Cattle_Y_T01876;Dbxref=GeneID:100336606,GenBank:XM_059884028.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884028.1-23
haplotype2-0000357	CAT	exon	57859161	57859284	.	-	.	ID=Cattle_Y_E04639;Parent=Cattle_Y_T01876;Dbxref=GeneID:100336606,GenBank:XM_059884028.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884028.1-23
haplotype2-0000357	CAT	exon	57860596	57860738	.	-	.	ID=Cattle_Y_E04640;Parent=Cattle_Y_T01876;Dbxref=GeneID:100336606,GenBank:XM_059884028.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884028.1-23
haplotype2-0000357	CAT	exon	57861779	57861880	.	-	.	ID=Cattle_Y_E04641;Parent=Cattle_Y_T01876;Dbxref=GeneID:100336606,GenBank:XM_059884028.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884028.1-23
haplotype2-0000357	CAT	exon	57867606	57868288	.	-	.	ID=Cattle_Y_E04642;Parent=Cattle_Y_T01876;Dbxref=GeneID:100336606,GenBank:XM_059884028.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X1;transcript_id=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884028.1-1
haplotype2-0000357	CAT	CDS	57814669	57814842	.	-	0	ID=Cattle_Y_C04028;Parent=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01876;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57817972	57818053	.	-	1	ID=Cattle_Y_C04029;Parent=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01876;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57819991	57820084	.	-	2	ID=Cattle_Y_C04030;Parent=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01876;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57820331	57820426	.	-	2	ID=Cattle_Y_C04031;Parent=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01876;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57820961	57821096	.	-	0	ID=Cattle_Y_C04032;Parent=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01876;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57823050	57823073	.	-	0	ID=Cattle_Y_C04033;Parent=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01876;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57824616	57824749	.	-	2	ID=Cattle_Y_C04034;Parent=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01876;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57826682	57826866	.	-	1	ID=Cattle_Y_C04035;Parent=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01876;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57828246	57828375	.	-	2	ID=Cattle_Y_C04036;Parent=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01876;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57828492	57828615	.	-	0	ID=Cattle_Y_C04037;Parent=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01876;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57830367	57830509	.	-	2	ID=Cattle_Y_C04038;Parent=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01876;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57835096	57835180	.	-	0	ID=Cattle_Y_C04039;Parent=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01876;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57847117	57847198	.	-	1	ID=Cattle_Y_C04040;Parent=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01876;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57852854	57852950	.	-	2	ID=Cattle_Y_C04041;Parent=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01876;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57855125	57855260	.	-	0	ID=Cattle_Y_C04042;Parent=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01876;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57856418	57856447	.	-	0	ID=Cattle_Y_C04043;Parent=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01876;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857132	57857265	.	-	2	ID=Cattle_Y_C04044;Parent=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01876;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857664	57857836	.	-	1	ID=Cattle_Y_C04045;Parent=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01876;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857930	57858056	.	-	2	ID=Cattle_Y_C04046;Parent=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01876;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57859161	57859284	.	-	0	ID=Cattle_Y_C04047;Parent=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01876;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57860596	57860738	.	-	2	ID=Cattle_Y_C04048;Parent=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01876;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57861779	57861880	.	-	2	ID=Cattle_Y_C04049;Parent=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01876;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57867606	57867816	.	-	0	ID=Cattle_Y_C04050;Parent=Cattle_Y_T01876;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01876;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57812956	57868285	.	-	.	ID=Cattle_Y_T01877;Parent=Cattle_Y_G01088;Dbxref=GeneID:100336606,GenBank:XM_059884029.1,VGNC:VGNC:55042;Name=XM_059884029.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;model_evidence=Supporting evidence includes similarity to: 23 ESTs%2C 8 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 7 samples with support for all annotated introns;product=colony stimulating factor 2 receptor subunit alpha%2C transcript variant X2;transcript_id=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884029.1
haplotype2-0000357	CAT	exon	57812956	57814842	.	-	.	ID=Cattle_Y_E04643;Parent=Cattle_Y_T01877;Dbxref=GeneID:100336606,GenBank:XM_059884029.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884029.1-22
haplotype2-0000357	CAT	exon	57817972	57818053	.	-	.	ID=Cattle_Y_E04644;Parent=Cattle_Y_T01877;Dbxref=GeneID:100336606,GenBank:XM_059884029.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884029.1-22
haplotype2-0000357	CAT	exon	57819991	57820084	.	-	.	ID=Cattle_Y_E04645;Parent=Cattle_Y_T01877;Dbxref=GeneID:100336606,GenBank:XM_059884029.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884029.1-22
haplotype2-0000357	CAT	exon	57820961	57821096	.	-	.	ID=Cattle_Y_E04646;Parent=Cattle_Y_T01877;Dbxref=GeneID:100336606,GenBank:XM_059884029.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884029.1-22
haplotype2-0000357	CAT	exon	57823050	57823073	.	-	.	ID=Cattle_Y_E04647;Parent=Cattle_Y_T01877;Dbxref=GeneID:100336606,GenBank:XM_059884029.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884029.1-22
haplotype2-0000357	CAT	exon	57824616	57824749	.	-	.	ID=Cattle_Y_E04648;Parent=Cattle_Y_T01877;Dbxref=GeneID:100336606,GenBank:XM_059884029.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884029.1-22
haplotype2-0000357	CAT	exon	57826682	57826866	.	-	.	ID=Cattle_Y_E04649;Parent=Cattle_Y_T01877;Dbxref=GeneID:100336606,GenBank:XM_059884029.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884029.1-22
haplotype2-0000357	CAT	exon	57828246	57828375	.	-	.	ID=Cattle_Y_E04650;Parent=Cattle_Y_T01877;Dbxref=GeneID:100336606,GenBank:XM_059884029.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884029.1-22
haplotype2-0000357	CAT	exon	57828492	57828615	.	-	.	ID=Cattle_Y_E04651;Parent=Cattle_Y_T01877;Dbxref=GeneID:100336606,GenBank:XM_059884029.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884029.1-22
haplotype2-0000357	CAT	exon	57830367	57830509	.	-	.	ID=Cattle_Y_E04652;Parent=Cattle_Y_T01877;Dbxref=GeneID:100336606,GenBank:XM_059884029.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884029.1-22
haplotype2-0000357	CAT	exon	57835096	57835180	.	-	.	ID=Cattle_Y_E04653;Parent=Cattle_Y_T01877;Dbxref=GeneID:100336606,GenBank:XM_059884029.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884029.1-22
haplotype2-0000357	CAT	exon	57847117	57847198	.	-	.	ID=Cattle_Y_E04654;Parent=Cattle_Y_T01877;Dbxref=GeneID:100336606,GenBank:XM_059884029.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884029.1-22
haplotype2-0000357	CAT	exon	57852854	57852950	.	-	.	ID=Cattle_Y_E04655;Parent=Cattle_Y_T01877;Dbxref=GeneID:100336606,GenBank:XM_059884029.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884029.1-22
haplotype2-0000357	CAT	exon	57855125	57855260	.	-	.	ID=Cattle_Y_E04656;Parent=Cattle_Y_T01877;Dbxref=GeneID:100336606,GenBank:XM_059884029.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884029.1-22
haplotype2-0000357	CAT	exon	57856418	57856447	.	-	.	ID=Cattle_Y_E04657;Parent=Cattle_Y_T01877;Dbxref=GeneID:100336606,GenBank:XM_059884029.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884029.1-22
haplotype2-0000357	CAT	exon	57857132	57857265	.	-	.	ID=Cattle_Y_E04658;Parent=Cattle_Y_T01877;Dbxref=GeneID:100336606,GenBank:XM_059884029.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884029.1-22
haplotype2-0000357	CAT	exon	57857664	57857836	.	-	.	ID=Cattle_Y_E04659;Parent=Cattle_Y_T01877;Dbxref=GeneID:100336606,GenBank:XM_059884029.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884029.1-22
haplotype2-0000357	CAT	exon	57857930	57858056	.	-	.	ID=Cattle_Y_E04660;Parent=Cattle_Y_T01877;Dbxref=GeneID:100336606,GenBank:XM_059884029.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884029.1-22
haplotype2-0000357	CAT	exon	57859161	57859284	.	-	.	ID=Cattle_Y_E04661;Parent=Cattle_Y_T01877;Dbxref=GeneID:100336606,GenBank:XM_059884029.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884029.1-22
haplotype2-0000357	CAT	exon	57860596	57860738	.	-	.	ID=Cattle_Y_E04662;Parent=Cattle_Y_T01877;Dbxref=GeneID:100336606,GenBank:XM_059884029.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884029.1-22
haplotype2-0000357	CAT	exon	57861779	57861880	.	-	.	ID=Cattle_Y_E04663;Parent=Cattle_Y_T01877;Dbxref=GeneID:100336606,GenBank:XM_059884029.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884029.1-22
haplotype2-0000357	CAT	exon	57867606	57868285	.	-	.	ID=Cattle_Y_E04664;Parent=Cattle_Y_T01877;Dbxref=GeneID:100336606,GenBank:XM_059884029.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X2;transcript_id=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884029.1-1
haplotype2-0000357	CAT	CDS	57814669	57814842	.	-	0	ID=Cattle_Y_C04051;Parent=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01877;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57817972	57818053	.	-	1	ID=Cattle_Y_C04052;Parent=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01877;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57819991	57820084	.	-	2	ID=Cattle_Y_C04053;Parent=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01877;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57820961	57821096	.	-	0	ID=Cattle_Y_C04054;Parent=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01877;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57823050	57823073	.	-	0	ID=Cattle_Y_C04055;Parent=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01877;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57824616	57824749	.	-	2	ID=Cattle_Y_C04056;Parent=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01877;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57826682	57826866	.	-	1	ID=Cattle_Y_C04057;Parent=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01877;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57828246	57828375	.	-	2	ID=Cattle_Y_C04058;Parent=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01877;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57828492	57828615	.	-	0	ID=Cattle_Y_C04059;Parent=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01877;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57830367	57830509	.	-	2	ID=Cattle_Y_C04060;Parent=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01877;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57835096	57835180	.	-	0	ID=Cattle_Y_C04061;Parent=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01877;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57847117	57847198	.	-	1	ID=Cattle_Y_C04062;Parent=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01877;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57852854	57852950	.	-	2	ID=Cattle_Y_C04063;Parent=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01877;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57855125	57855260	.	-	0	ID=Cattle_Y_C04064;Parent=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01877;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57856418	57856447	.	-	0	ID=Cattle_Y_C04065;Parent=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01877;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857132	57857265	.	-	2	ID=Cattle_Y_C04066;Parent=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01877;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857664	57857836	.	-	1	ID=Cattle_Y_C04067;Parent=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01877;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857930	57858056	.	-	2	ID=Cattle_Y_C04068;Parent=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01877;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57859161	57859284	.	-	0	ID=Cattle_Y_C04069;Parent=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01877;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57860596	57860738	.	-	2	ID=Cattle_Y_C04070;Parent=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01877;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57861779	57861880	.	-	2	ID=Cattle_Y_C04071;Parent=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01877;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57867606	57867816	.	-	0	ID=Cattle_Y_C04072;Parent=Cattle_Y_T01877;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01877;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57812956	57879601	.	-	.	ID=Cattle_Y_T01878;Parent=Cattle_Y_G01088;Dbxref=GeneID:100336606,GenBank:XM_059884030.1,VGNC:VGNC:55042;Name=XM_059884030.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;model_evidence=Supporting evidence includes similarity to: 18 ESTs%2C 8 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 5 samples with support for all annotated introns;product=colony stimulating factor 2 receptor subunit alpha%2C transcript variant X3;transcript_id=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884030.1
haplotype2-0000357	CAT	exon	57812956	57814842	.	-	.	ID=Cattle_Y_E04665;Parent=Cattle_Y_T01878;Dbxref=GeneID:100336606,GenBank:XM_059884030.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884030.1-23
haplotype2-0000357	CAT	exon	57817972	57818053	.	-	.	ID=Cattle_Y_E04666;Parent=Cattle_Y_T01878;Dbxref=GeneID:100336606,GenBank:XM_059884030.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884030.1-23
haplotype2-0000357	CAT	exon	57819991	57820084	.	-	.	ID=Cattle_Y_E04667;Parent=Cattle_Y_T01878;Dbxref=GeneID:100336606,GenBank:XM_059884030.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884030.1-23
haplotype2-0000357	CAT	exon	57820331	57820426	.	-	.	ID=Cattle_Y_E04668;Parent=Cattle_Y_T01878;Dbxref=GeneID:100336606,GenBank:XM_059884030.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884030.1-23
haplotype2-0000357	CAT	exon	57820961	57821096	.	-	.	ID=Cattle_Y_E04669;Parent=Cattle_Y_T01878;Dbxref=GeneID:100336606,GenBank:XM_059884030.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884030.1-23
haplotype2-0000357	CAT	exon	57823050	57823073	.	-	.	ID=Cattle_Y_E04670;Parent=Cattle_Y_T01878;Dbxref=GeneID:100336606,GenBank:XM_059884030.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884030.1-23
haplotype2-0000357	CAT	exon	57824616	57824749	.	-	.	ID=Cattle_Y_E04671;Parent=Cattle_Y_T01878;Dbxref=GeneID:100336606,GenBank:XM_059884030.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884030.1-23
haplotype2-0000357	CAT	exon	57826682	57826866	.	-	.	ID=Cattle_Y_E04672;Parent=Cattle_Y_T01878;Dbxref=GeneID:100336606,GenBank:XM_059884030.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884030.1-23
haplotype2-0000357	CAT	exon	57828246	57828375	.	-	.	ID=Cattle_Y_E04673;Parent=Cattle_Y_T01878;Dbxref=GeneID:100336606,GenBank:XM_059884030.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884030.1-23
haplotype2-0000357	CAT	exon	57828492	57828615	.	-	.	ID=Cattle_Y_E04674;Parent=Cattle_Y_T01878;Dbxref=GeneID:100336606,GenBank:XM_059884030.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884030.1-23
haplotype2-0000357	CAT	exon	57830367	57830509	.	-	.	ID=Cattle_Y_E04675;Parent=Cattle_Y_T01878;Dbxref=GeneID:100336606,GenBank:XM_059884030.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884030.1-23
haplotype2-0000357	CAT	exon	57835096	57835180	.	-	.	ID=Cattle_Y_E04676;Parent=Cattle_Y_T01878;Dbxref=GeneID:100336606,GenBank:XM_059884030.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884030.1-23
haplotype2-0000357	CAT	exon	57847117	57847198	.	-	.	ID=Cattle_Y_E04677;Parent=Cattle_Y_T01878;Dbxref=GeneID:100336606,GenBank:XM_059884030.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884030.1-23
haplotype2-0000357	CAT	exon	57852854	57852950	.	-	.	ID=Cattle_Y_E04678;Parent=Cattle_Y_T01878;Dbxref=GeneID:100336606,GenBank:XM_059884030.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884030.1-23
haplotype2-0000357	CAT	exon	57855125	57855260	.	-	.	ID=Cattle_Y_E04679;Parent=Cattle_Y_T01878;Dbxref=GeneID:100336606,GenBank:XM_059884030.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884030.1-23
haplotype2-0000357	CAT	exon	57856418	57856447	.	-	.	ID=Cattle_Y_E04680;Parent=Cattle_Y_T01878;Dbxref=GeneID:100336606,GenBank:XM_059884030.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884030.1-23
haplotype2-0000357	CAT	exon	57857132	57857265	.	-	.	ID=Cattle_Y_E04681;Parent=Cattle_Y_T01878;Dbxref=GeneID:100336606,GenBank:XM_059884030.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884030.1-23
haplotype2-0000357	CAT	exon	57857664	57857836	.	-	.	ID=Cattle_Y_E04682;Parent=Cattle_Y_T01878;Dbxref=GeneID:100336606,GenBank:XM_059884030.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884030.1-23
haplotype2-0000357	CAT	exon	57857930	57858056	.	-	.	ID=Cattle_Y_E04683;Parent=Cattle_Y_T01878;Dbxref=GeneID:100336606,GenBank:XM_059884030.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884030.1-23
haplotype2-0000357	CAT	exon	57859161	57859284	.	-	.	ID=Cattle_Y_E04684;Parent=Cattle_Y_T01878;Dbxref=GeneID:100336606,GenBank:XM_059884030.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884030.1-23
haplotype2-0000357	CAT	exon	57860596	57860738	.	-	.	ID=Cattle_Y_E04685;Parent=Cattle_Y_T01878;Dbxref=GeneID:100336606,GenBank:XM_059884030.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884030.1-23
haplotype2-0000357	CAT	exon	57861779	57861880	.	-	.	ID=Cattle_Y_E04686;Parent=Cattle_Y_T01878;Dbxref=GeneID:100336606,GenBank:XM_059884030.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884030.1-2
haplotype2-0000357	CAT	exon	57879213	57879601	.	-	.	ID=Cattle_Y_E04687;Parent=Cattle_Y_T01878;Dbxref=GeneID:100336606,GenBank:XM_059884030.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X3;transcript_id=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884030.1-1
haplotype2-0000357	CAT	CDS	57814669	57814842	.	-	0	ID=Cattle_Y_C04073;Parent=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01878;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57817972	57818053	.	-	1	ID=Cattle_Y_C04074;Parent=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01878;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57819991	57820084	.	-	2	ID=Cattle_Y_C04075;Parent=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01878;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57820331	57820426	.	-	2	ID=Cattle_Y_C04076;Parent=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01878;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57820961	57821096	.	-	0	ID=Cattle_Y_C04077;Parent=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01878;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57823050	57823073	.	-	0	ID=Cattle_Y_C04078;Parent=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01878;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57824616	57824749	.	-	2	ID=Cattle_Y_C04079;Parent=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01878;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57826682	57826866	.	-	1	ID=Cattle_Y_C04080;Parent=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01878;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57828246	57828375	.	-	2	ID=Cattle_Y_C04081;Parent=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01878;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57828492	57828615	.	-	0	ID=Cattle_Y_C04082;Parent=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01878;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57830367	57830509	.	-	2	ID=Cattle_Y_C04083;Parent=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01878;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57835096	57835180	.	-	0	ID=Cattle_Y_C04084;Parent=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01878;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57847117	57847198	.	-	1	ID=Cattle_Y_C04085;Parent=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01878;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57852854	57852950	.	-	2	ID=Cattle_Y_C04086;Parent=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01878;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57855125	57855260	.	-	0	ID=Cattle_Y_C04087;Parent=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01878;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57856418	57856447	.	-	0	ID=Cattle_Y_C04088;Parent=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01878;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857132	57857265	.	-	2	ID=Cattle_Y_C04089;Parent=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01878;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857664	57857836	.	-	1	ID=Cattle_Y_C04090;Parent=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01878;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857930	57858056	.	-	2	ID=Cattle_Y_C04091;Parent=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01878;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57859161	57859284	.	-	0	ID=Cattle_Y_C04092;Parent=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01878;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57860596	57860738	.	-	2	ID=Cattle_Y_C04093;Parent=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01878;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57861779	57861821	.	-	0	ID=Cattle_Y_C04094;Parent=Cattle_Y_T01878;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01878;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57812956	57867590	.	-	.	ID=Cattle_Y_T01879;Parent=Cattle_Y_G01088;Dbxref=GeneID:100336606,GenBank:XM_059884031.1,VGNC:VGNC:55042;Name=XM_059884031.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;model_evidence=Supporting evidence includes similarity to: 18 ESTs%2C 8 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=colony stimulating factor 2 receptor subunit alpha%2C transcript variant X4;transcript_id=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884031.1
haplotype2-0000357	CAT	exon	57812956	57814842	.	-	.	ID=Cattle_Y_E04688;Parent=Cattle_Y_T01879;Dbxref=GeneID:100336606,GenBank:XM_059884031.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884031.1-23
haplotype2-0000357	CAT	exon	57817972	57818053	.	-	.	ID=Cattle_Y_E04689;Parent=Cattle_Y_T01879;Dbxref=GeneID:100336606,GenBank:XM_059884031.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884031.1-23
haplotype2-0000357	CAT	exon	57819991	57820084	.	-	.	ID=Cattle_Y_E04690;Parent=Cattle_Y_T01879;Dbxref=GeneID:100336606,GenBank:XM_059884031.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884031.1-23
haplotype2-0000357	CAT	exon	57820331	57820426	.	-	.	ID=Cattle_Y_E04691;Parent=Cattle_Y_T01879;Dbxref=GeneID:100336606,GenBank:XM_059884031.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884031.1-23
haplotype2-0000357	CAT	exon	57820961	57821096	.	-	.	ID=Cattle_Y_E04692;Parent=Cattle_Y_T01879;Dbxref=GeneID:100336606,GenBank:XM_059884031.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884031.1-23
haplotype2-0000357	CAT	exon	57823050	57823073	.	-	.	ID=Cattle_Y_E04693;Parent=Cattle_Y_T01879;Dbxref=GeneID:100336606,GenBank:XM_059884031.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884031.1-23
haplotype2-0000357	CAT	exon	57824616	57824749	.	-	.	ID=Cattle_Y_E04694;Parent=Cattle_Y_T01879;Dbxref=GeneID:100336606,GenBank:XM_059884031.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884031.1-23
haplotype2-0000357	CAT	exon	57826682	57826866	.	-	.	ID=Cattle_Y_E04695;Parent=Cattle_Y_T01879;Dbxref=GeneID:100336606,GenBank:XM_059884031.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884031.1-23
haplotype2-0000357	CAT	exon	57828246	57828375	.	-	.	ID=Cattle_Y_E04696;Parent=Cattle_Y_T01879;Dbxref=GeneID:100336606,GenBank:XM_059884031.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884031.1-23
haplotype2-0000357	CAT	exon	57828492	57828615	.	-	.	ID=Cattle_Y_E04697;Parent=Cattle_Y_T01879;Dbxref=GeneID:100336606,GenBank:XM_059884031.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884031.1-23
haplotype2-0000357	CAT	exon	57830367	57830509	.	-	.	ID=Cattle_Y_E04698;Parent=Cattle_Y_T01879;Dbxref=GeneID:100336606,GenBank:XM_059884031.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884031.1-23
haplotype2-0000357	CAT	exon	57835096	57835180	.	-	.	ID=Cattle_Y_E04699;Parent=Cattle_Y_T01879;Dbxref=GeneID:100336606,GenBank:XM_059884031.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884031.1-23
haplotype2-0000357	CAT	exon	57847117	57847198	.	-	.	ID=Cattle_Y_E04700;Parent=Cattle_Y_T01879;Dbxref=GeneID:100336606,GenBank:XM_059884031.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884031.1-23
haplotype2-0000357	CAT	exon	57852854	57852950	.	-	.	ID=Cattle_Y_E04701;Parent=Cattle_Y_T01879;Dbxref=GeneID:100336606,GenBank:XM_059884031.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884031.1-23
haplotype2-0000357	CAT	exon	57855125	57855260	.	-	.	ID=Cattle_Y_E04702;Parent=Cattle_Y_T01879;Dbxref=GeneID:100336606,GenBank:XM_059884031.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884031.1-23
haplotype2-0000357	CAT	exon	57856418	57856447	.	-	.	ID=Cattle_Y_E04703;Parent=Cattle_Y_T01879;Dbxref=GeneID:100336606,GenBank:XM_059884031.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884031.1-23
haplotype2-0000357	CAT	exon	57857132	57857265	.	-	.	ID=Cattle_Y_E04704;Parent=Cattle_Y_T01879;Dbxref=GeneID:100336606,GenBank:XM_059884031.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884031.1-23
haplotype2-0000357	CAT	exon	57857664	57857836	.	-	.	ID=Cattle_Y_E04705;Parent=Cattle_Y_T01879;Dbxref=GeneID:100336606,GenBank:XM_059884031.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884031.1-23
haplotype2-0000357	CAT	exon	57857930	57858056	.	-	.	ID=Cattle_Y_E04706;Parent=Cattle_Y_T01879;Dbxref=GeneID:100336606,GenBank:XM_059884031.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884031.1-23
haplotype2-0000357	CAT	exon	57859161	57859284	.	-	.	ID=Cattle_Y_E04707;Parent=Cattle_Y_T01879;Dbxref=GeneID:100336606,GenBank:XM_059884031.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884031.1-23
haplotype2-0000357	CAT	exon	57860596	57860738	.	-	.	ID=Cattle_Y_E04708;Parent=Cattle_Y_T01879;Dbxref=GeneID:100336606,GenBank:XM_059884031.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884031.1-23
haplotype2-0000357	CAT	exon	57861779	57861880	.	-	.	ID=Cattle_Y_E04709;Parent=Cattle_Y_T01879;Dbxref=GeneID:100336606,GenBank:XM_059884031.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884031.1-2
haplotype2-0000357	CAT	exon	57867476	57867590	.	-	.	ID=Cattle_Y_E04710;Parent=Cattle_Y_T01879;Dbxref=GeneID:100336606,GenBank:XM_059884031.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X4;transcript_id=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884031.1-1
haplotype2-0000357	CAT	CDS	57814669	57814842	.	-	0	ID=Cattle_Y_C04095;Parent=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01879;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57817972	57818053	.	-	1	ID=Cattle_Y_C04096;Parent=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01879;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57819991	57820084	.	-	2	ID=Cattle_Y_C04097;Parent=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01879;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57820331	57820426	.	-	2	ID=Cattle_Y_C04098;Parent=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01879;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57820961	57821096	.	-	0	ID=Cattle_Y_C04099;Parent=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01879;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57823050	57823073	.	-	0	ID=Cattle_Y_C04100;Parent=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01879;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57824616	57824749	.	-	2	ID=Cattle_Y_C04101;Parent=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01879;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57826682	57826866	.	-	1	ID=Cattle_Y_C04102;Parent=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01879;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57828246	57828375	.	-	2	ID=Cattle_Y_C04103;Parent=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01879;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57828492	57828615	.	-	0	ID=Cattle_Y_C04104;Parent=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01879;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57830367	57830509	.	-	2	ID=Cattle_Y_C04105;Parent=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01879;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57835096	57835180	.	-	0	ID=Cattle_Y_C04106;Parent=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01879;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57847117	57847198	.	-	1	ID=Cattle_Y_C04107;Parent=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01879;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57852854	57852950	.	-	2	ID=Cattle_Y_C04108;Parent=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01879;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57855125	57855260	.	-	0	ID=Cattle_Y_C04109;Parent=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01879;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57856418	57856447	.	-	0	ID=Cattle_Y_C04110;Parent=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01879;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857132	57857265	.	-	2	ID=Cattle_Y_C04111;Parent=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01879;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857664	57857836	.	-	1	ID=Cattle_Y_C04112;Parent=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01879;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857930	57858056	.	-	2	ID=Cattle_Y_C04113;Parent=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01879;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57859161	57859284	.	-	0	ID=Cattle_Y_C04114;Parent=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01879;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57860596	57860738	.	-	2	ID=Cattle_Y_C04115;Parent=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01879;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57861779	57861821	.	-	0	ID=Cattle_Y_C04116;Parent=Cattle_Y_T01879;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01879;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57812956	57860684	.	-	.	ID=Cattle_Y_T01880;Parent=Cattle_Y_G01088;Dbxref=GeneID:100336606,GenBank:XM_059884032.1,VGNC:VGNC:55042;Name=XM_059884032.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;model_evidence=Supporting evidence includes similarity to: 13 ESTs%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 7 samples with support for all annotated introns;product=colony stimulating factor 2 receptor subunit alpha%2C transcript variant X5;transcript_id=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884032.1
haplotype2-0000357	CAT	exon	57812956	57814842	.	-	.	ID=Cattle_Y_E04711;Parent=Cattle_Y_T01880;Dbxref=GeneID:100336606,GenBank:XM_059884032.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X5;transcript_id=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884032.1-20
haplotype2-0000357	CAT	exon	57817972	57818053	.	-	.	ID=Cattle_Y_E04712;Parent=Cattle_Y_T01880;Dbxref=GeneID:100336606,GenBank:XM_059884032.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X5;transcript_id=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884032.1-20
haplotype2-0000357	CAT	exon	57819991	57820084	.	-	.	ID=Cattle_Y_E04713;Parent=Cattle_Y_T01880;Dbxref=GeneID:100336606,GenBank:XM_059884032.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X5;transcript_id=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884032.1-20
haplotype2-0000357	CAT	exon	57820331	57820426	.	-	.	ID=Cattle_Y_E04714;Parent=Cattle_Y_T01880;Dbxref=GeneID:100336606,GenBank:XM_059884032.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X5;transcript_id=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884032.1-20
haplotype2-0000357	CAT	exon	57820961	57821096	.	-	.	ID=Cattle_Y_E04715;Parent=Cattle_Y_T01880;Dbxref=GeneID:100336606,GenBank:XM_059884032.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X5;transcript_id=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884032.1-20
haplotype2-0000357	CAT	exon	57823050	57823073	.	-	.	ID=Cattle_Y_E04716;Parent=Cattle_Y_T01880;Dbxref=GeneID:100336606,GenBank:XM_059884032.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X5;transcript_id=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884032.1-20
haplotype2-0000357	CAT	exon	57824616	57824749	.	-	.	ID=Cattle_Y_E04717;Parent=Cattle_Y_T01880;Dbxref=GeneID:100336606,GenBank:XM_059884032.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X5;transcript_id=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884032.1-20
haplotype2-0000357	CAT	exon	57826682	57826866	.	-	.	ID=Cattle_Y_E04718;Parent=Cattle_Y_T01880;Dbxref=GeneID:100336606,GenBank:XM_059884032.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X5;transcript_id=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884032.1-20
haplotype2-0000357	CAT	exon	57828246	57828375	.	-	.	ID=Cattle_Y_E04719;Parent=Cattle_Y_T01880;Dbxref=GeneID:100336606,GenBank:XM_059884032.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X5;transcript_id=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884032.1-20
haplotype2-0000357	CAT	exon	57828492	57828615	.	-	.	ID=Cattle_Y_E04720;Parent=Cattle_Y_T01880;Dbxref=GeneID:100336606,GenBank:XM_059884032.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X5;transcript_id=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884032.1-20
haplotype2-0000357	CAT	exon	57830367	57830509	.	-	.	ID=Cattle_Y_E04721;Parent=Cattle_Y_T01880;Dbxref=GeneID:100336606,GenBank:XM_059884032.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X5;transcript_id=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884032.1-20
haplotype2-0000357	CAT	exon	57835096	57835180	.	-	.	ID=Cattle_Y_E04722;Parent=Cattle_Y_T01880;Dbxref=GeneID:100336606,GenBank:XM_059884032.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X5;transcript_id=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884032.1-20
haplotype2-0000357	CAT	exon	57847117	57847198	.	-	.	ID=Cattle_Y_E04723;Parent=Cattle_Y_T01880;Dbxref=GeneID:100336606,GenBank:XM_059884032.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X5;transcript_id=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884032.1-20
haplotype2-0000357	CAT	exon	57852854	57852950	.	-	.	ID=Cattle_Y_E04724;Parent=Cattle_Y_T01880;Dbxref=GeneID:100336606,GenBank:XM_059884032.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X5;transcript_id=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884032.1-20
haplotype2-0000357	CAT	exon	57855125	57855260	.	-	.	ID=Cattle_Y_E04725;Parent=Cattle_Y_T01880;Dbxref=GeneID:100336606,GenBank:XM_059884032.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X5;transcript_id=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884032.1-20
haplotype2-0000357	CAT	exon	57856418	57856447	.	-	.	ID=Cattle_Y_E04726;Parent=Cattle_Y_T01880;Dbxref=GeneID:100336606,GenBank:XM_059884032.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X5;transcript_id=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884032.1-20
haplotype2-0000357	CAT	exon	57857132	57857265	.	-	.	ID=Cattle_Y_E04727;Parent=Cattle_Y_T01880;Dbxref=GeneID:100336606,GenBank:XM_059884032.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X5;transcript_id=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884032.1-20
haplotype2-0000357	CAT	exon	57857664	57857836	.	-	.	ID=Cattle_Y_E04728;Parent=Cattle_Y_T01880;Dbxref=GeneID:100336606,GenBank:XM_059884032.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X5;transcript_id=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884032.1-20
haplotype2-0000357	CAT	exon	57857930	57858243	.	-	.	ID=Cattle_Y_E04729;Parent=Cattle_Y_T01880;Dbxref=GeneID:100336606,GenBank:XM_059884032.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X5;transcript_id=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884032.1-2
haplotype2-0000357	CAT	exon	57860596	57860684	.	-	.	ID=Cattle_Y_E04730;Parent=Cattle_Y_T01880;Dbxref=GeneID:100336606,GenBank:XM_059884032.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X5;transcript_id=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884032.1-1
haplotype2-0000357	CAT	CDS	57814669	57814842	.	-	0	ID=Cattle_Y_C04117;Parent=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01880;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57817972	57818053	.	-	1	ID=Cattle_Y_C04118;Parent=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01880;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57819991	57820084	.	-	2	ID=Cattle_Y_C04119;Parent=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01880;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57820331	57820426	.	-	2	ID=Cattle_Y_C04120;Parent=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01880;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57820961	57821096	.	-	0	ID=Cattle_Y_C04121;Parent=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01880;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57823050	57823073	.	-	0	ID=Cattle_Y_C04122;Parent=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01880;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57824616	57824749	.	-	2	ID=Cattle_Y_C04123;Parent=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01880;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57826682	57826866	.	-	1	ID=Cattle_Y_C04124;Parent=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01880;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57828246	57828375	.	-	2	ID=Cattle_Y_C04125;Parent=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01880;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57828492	57828615	.	-	0	ID=Cattle_Y_C04126;Parent=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01880;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57830367	57830509	.	-	2	ID=Cattle_Y_C04127;Parent=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01880;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57835096	57835180	.	-	0	ID=Cattle_Y_C04128;Parent=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01880;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57847117	57847198	.	-	1	ID=Cattle_Y_C04129;Parent=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01880;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57852854	57852950	.	-	2	ID=Cattle_Y_C04130;Parent=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01880;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57855125	57855260	.	-	0	ID=Cattle_Y_C04131;Parent=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01880;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57856418	57856447	.	-	0	ID=Cattle_Y_C04132;Parent=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01880;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857132	57857265	.	-	2	ID=Cattle_Y_C04133;Parent=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01880;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857664	57857836	.	-	1	ID=Cattle_Y_C04134;Parent=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01880;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857930	57858000	.	-	0	ID=Cattle_Y_C04135;Parent=Cattle_Y_T01880;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01880;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57812956	57859249	.	-	.	ID=Cattle_Y_T01881;Parent=Cattle_Y_G01088;Dbxref=GeneID:100336606,GenBank:XM_059884033.1,VGNC:VGNC:55042;Name=XM_059884033.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;model_evidence=Supporting evidence includes similarity to: 13 ESTs%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 7 samples with support for all annotated introns;product=colony stimulating factor 2 receptor subunit alpha%2C transcript variant X6;transcript_id=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884033.1
haplotype2-0000357	CAT	exon	57812956	57814842	.	-	.	ID=Cattle_Y_E04731;Parent=Cattle_Y_T01881;Dbxref=GeneID:100336606,GenBank:XM_059884033.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X6;transcript_id=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884033.1-20
haplotype2-0000357	CAT	exon	57817972	57818053	.	-	.	ID=Cattle_Y_E04732;Parent=Cattle_Y_T01881;Dbxref=GeneID:100336606,GenBank:XM_059884033.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X6;transcript_id=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884033.1-20
haplotype2-0000357	CAT	exon	57819991	57820084	.	-	.	ID=Cattle_Y_E04733;Parent=Cattle_Y_T01881;Dbxref=GeneID:100336606,GenBank:XM_059884033.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X6;transcript_id=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884033.1-20
haplotype2-0000357	CAT	exon	57820331	57820426	.	-	.	ID=Cattle_Y_E04734;Parent=Cattle_Y_T01881;Dbxref=GeneID:100336606,GenBank:XM_059884033.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X6;transcript_id=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884033.1-20
haplotype2-0000357	CAT	exon	57820961	57821096	.	-	.	ID=Cattle_Y_E04735;Parent=Cattle_Y_T01881;Dbxref=GeneID:100336606,GenBank:XM_059884033.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X6;transcript_id=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884033.1-20
haplotype2-0000357	CAT	exon	57823050	57823073	.	-	.	ID=Cattle_Y_E04736;Parent=Cattle_Y_T01881;Dbxref=GeneID:100336606,GenBank:XM_059884033.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X6;transcript_id=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884033.1-20
haplotype2-0000357	CAT	exon	57824616	57824749	.	-	.	ID=Cattle_Y_E04737;Parent=Cattle_Y_T01881;Dbxref=GeneID:100336606,GenBank:XM_059884033.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X6;transcript_id=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884033.1-20
haplotype2-0000357	CAT	exon	57826682	57826866	.	-	.	ID=Cattle_Y_E04738;Parent=Cattle_Y_T01881;Dbxref=GeneID:100336606,GenBank:XM_059884033.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X6;transcript_id=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884033.1-20
haplotype2-0000357	CAT	exon	57828246	57828375	.	-	.	ID=Cattle_Y_E04739;Parent=Cattle_Y_T01881;Dbxref=GeneID:100336606,GenBank:XM_059884033.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X6;transcript_id=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884033.1-20
haplotype2-0000357	CAT	exon	57828492	57828615	.	-	.	ID=Cattle_Y_E04740;Parent=Cattle_Y_T01881;Dbxref=GeneID:100336606,GenBank:XM_059884033.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X6;transcript_id=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884033.1-20
haplotype2-0000357	CAT	exon	57830367	57830509	.	-	.	ID=Cattle_Y_E04741;Parent=Cattle_Y_T01881;Dbxref=GeneID:100336606,GenBank:XM_059884033.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X6;transcript_id=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884033.1-20
haplotype2-0000357	CAT	exon	57835096	57835180	.	-	.	ID=Cattle_Y_E04742;Parent=Cattle_Y_T01881;Dbxref=GeneID:100336606,GenBank:XM_059884033.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X6;transcript_id=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884033.1-20
haplotype2-0000357	CAT	exon	57847117	57847198	.	-	.	ID=Cattle_Y_E04743;Parent=Cattle_Y_T01881;Dbxref=GeneID:100336606,GenBank:XM_059884033.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X6;transcript_id=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884033.1-20
haplotype2-0000357	CAT	exon	57852854	57852950	.	-	.	ID=Cattle_Y_E04744;Parent=Cattle_Y_T01881;Dbxref=GeneID:100336606,GenBank:XM_059884033.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X6;transcript_id=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884033.1-20
haplotype2-0000357	CAT	exon	57855125	57855260	.	-	.	ID=Cattle_Y_E04745;Parent=Cattle_Y_T01881;Dbxref=GeneID:100336606,GenBank:XM_059884033.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X6;transcript_id=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884033.1-20
haplotype2-0000357	CAT	exon	57856418	57856447	.	-	.	ID=Cattle_Y_E04746;Parent=Cattle_Y_T01881;Dbxref=GeneID:100336606,GenBank:XM_059884033.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X6;transcript_id=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884033.1-20
haplotype2-0000357	CAT	exon	57857132	57857265	.	-	.	ID=Cattle_Y_E04747;Parent=Cattle_Y_T01881;Dbxref=GeneID:100336606,GenBank:XM_059884033.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X6;transcript_id=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884033.1-20
haplotype2-0000357	CAT	exon	57857664	57857836	.	-	.	ID=Cattle_Y_E04748;Parent=Cattle_Y_T01881;Dbxref=GeneID:100336606,GenBank:XM_059884033.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X6;transcript_id=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884033.1-20
haplotype2-0000357	CAT	exon	57857930	57858243	.	-	.	ID=Cattle_Y_E04749;Parent=Cattle_Y_T01881;Dbxref=GeneID:100336606,GenBank:XM_059884033.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X6;transcript_id=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884033.1-2
haplotype2-0000357	CAT	exon	57859161	57859249	.	-	.	ID=Cattle_Y_E04750;Parent=Cattle_Y_T01881;Dbxref=GeneID:100336606,GenBank:XM_059884033.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X6;transcript_id=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884033.1-1
haplotype2-0000357	CAT	CDS	57814669	57814842	.	-	0	ID=Cattle_Y_C04136;Parent=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01881;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57817972	57818053	.	-	1	ID=Cattle_Y_C04137;Parent=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01881;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57819991	57820084	.	-	2	ID=Cattle_Y_C04138;Parent=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01881;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57820331	57820426	.	-	2	ID=Cattle_Y_C04139;Parent=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01881;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57820961	57821096	.	-	0	ID=Cattle_Y_C04140;Parent=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01881;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57823050	57823073	.	-	0	ID=Cattle_Y_C04141;Parent=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01881;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57824616	57824749	.	-	2	ID=Cattle_Y_C04142;Parent=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01881;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57826682	57826866	.	-	1	ID=Cattle_Y_C04143;Parent=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01881;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57828246	57828375	.	-	2	ID=Cattle_Y_C04144;Parent=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01881;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57828492	57828615	.	-	0	ID=Cattle_Y_C04145;Parent=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01881;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57830367	57830509	.	-	2	ID=Cattle_Y_C04146;Parent=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01881;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57835096	57835180	.	-	0	ID=Cattle_Y_C04147;Parent=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01881;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57847117	57847198	.	-	1	ID=Cattle_Y_C04148;Parent=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01881;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57852854	57852950	.	-	2	ID=Cattle_Y_C04149;Parent=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01881;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57855125	57855260	.	-	0	ID=Cattle_Y_C04150;Parent=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01881;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57856418	57856447	.	-	0	ID=Cattle_Y_C04151;Parent=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01881;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857132	57857265	.	-	2	ID=Cattle_Y_C04152;Parent=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01881;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857664	57857836	.	-	1	ID=Cattle_Y_C04153;Parent=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01881;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857930	57858000	.	-	0	ID=Cattle_Y_C04154;Parent=Cattle_Y_T01881;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01881;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57812956	57860683	.	-	.	ID=Cattle_Y_T01882;Parent=Cattle_Y_G01088;Dbxref=GeneID:100336606,GenBank:XM_059884034.1,VGNC:VGNC:55042;Name=XM_059884034.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;model_evidence=Supporting evidence includes similarity to: 13 ESTs%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 9 samples with support for all annotated introns;product=colony stimulating factor 2 receptor subunit alpha%2C transcript variant X7;transcript_id=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884034.1
haplotype2-0000357	CAT	exon	57812956	57814842	.	-	.	ID=Cattle_Y_E04751;Parent=Cattle_Y_T01882;Dbxref=GeneID:100336606,GenBank:XM_059884034.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X7;transcript_id=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884034.1-20
haplotype2-0000357	CAT	exon	57817972	57818053	.	-	.	ID=Cattle_Y_E04752;Parent=Cattle_Y_T01882;Dbxref=GeneID:100336606,GenBank:XM_059884034.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X7;transcript_id=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884034.1-20
haplotype2-0000357	CAT	exon	57819991	57820084	.	-	.	ID=Cattle_Y_E04753;Parent=Cattle_Y_T01882;Dbxref=GeneID:100336606,GenBank:XM_059884034.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X7;transcript_id=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884034.1-20
haplotype2-0000357	CAT	exon	57820331	57820426	.	-	.	ID=Cattle_Y_E04754;Parent=Cattle_Y_T01882;Dbxref=GeneID:100336606,GenBank:XM_059884034.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X7;transcript_id=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884034.1-20
haplotype2-0000357	CAT	exon	57820961	57821096	.	-	.	ID=Cattle_Y_E04755;Parent=Cattle_Y_T01882;Dbxref=GeneID:100336606,GenBank:XM_059884034.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X7;transcript_id=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884034.1-20
haplotype2-0000357	CAT	exon	57823050	57823073	.	-	.	ID=Cattle_Y_E04756;Parent=Cattle_Y_T01882;Dbxref=GeneID:100336606,GenBank:XM_059884034.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X7;transcript_id=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884034.1-20
haplotype2-0000357	CAT	exon	57824616	57824749	.	-	.	ID=Cattle_Y_E04757;Parent=Cattle_Y_T01882;Dbxref=GeneID:100336606,GenBank:XM_059884034.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X7;transcript_id=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884034.1-20
haplotype2-0000357	CAT	exon	57826682	57826866	.	-	.	ID=Cattle_Y_E04758;Parent=Cattle_Y_T01882;Dbxref=GeneID:100336606,GenBank:XM_059884034.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X7;transcript_id=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884034.1-20
haplotype2-0000357	CAT	exon	57828246	57828375	.	-	.	ID=Cattle_Y_E04759;Parent=Cattle_Y_T01882;Dbxref=GeneID:100336606,GenBank:XM_059884034.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X7;transcript_id=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884034.1-20
haplotype2-0000357	CAT	exon	57828492	57828615	.	-	.	ID=Cattle_Y_E04760;Parent=Cattle_Y_T01882;Dbxref=GeneID:100336606,GenBank:XM_059884034.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X7;transcript_id=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884034.1-20
haplotype2-0000357	CAT	exon	57830367	57830509	.	-	.	ID=Cattle_Y_E04761;Parent=Cattle_Y_T01882;Dbxref=GeneID:100336606,GenBank:XM_059884034.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X7;transcript_id=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884034.1-20
haplotype2-0000357	CAT	exon	57835096	57835180	.	-	.	ID=Cattle_Y_E04762;Parent=Cattle_Y_T01882;Dbxref=GeneID:100336606,GenBank:XM_059884034.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X7;transcript_id=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884034.1-20
haplotype2-0000357	CAT	exon	57847117	57847198	.	-	.	ID=Cattle_Y_E04763;Parent=Cattle_Y_T01882;Dbxref=GeneID:100336606,GenBank:XM_059884034.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X7;transcript_id=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884034.1-20
haplotype2-0000357	CAT	exon	57852854	57852950	.	-	.	ID=Cattle_Y_E04764;Parent=Cattle_Y_T01882;Dbxref=GeneID:100336606,GenBank:XM_059884034.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X7;transcript_id=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884034.1-20
haplotype2-0000357	CAT	exon	57855125	57855260	.	-	.	ID=Cattle_Y_E04765;Parent=Cattle_Y_T01882;Dbxref=GeneID:100336606,GenBank:XM_059884034.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X7;transcript_id=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884034.1-20
haplotype2-0000357	CAT	exon	57856418	57856447	.	-	.	ID=Cattle_Y_E04766;Parent=Cattle_Y_T01882;Dbxref=GeneID:100336606,GenBank:XM_059884034.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X7;transcript_id=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884034.1-20
haplotype2-0000357	CAT	exon	57857132	57857265	.	-	.	ID=Cattle_Y_E04767;Parent=Cattle_Y_T01882;Dbxref=GeneID:100336606,GenBank:XM_059884034.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X7;transcript_id=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884034.1-20
haplotype2-0000357	CAT	exon	57857664	57857836	.	-	.	ID=Cattle_Y_E04768;Parent=Cattle_Y_T01882;Dbxref=GeneID:100336606,GenBank:XM_059884034.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X7;transcript_id=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884034.1-20
haplotype2-0000357	CAT	exon	57857930	57858056	.	-	.	ID=Cattle_Y_E04769;Parent=Cattle_Y_T01882;Dbxref=GeneID:100336606,GenBank:XM_059884034.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X7;transcript_id=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884034.1-2
haplotype2-0000357	CAT	exon	57860596	57860683	.	-	.	ID=Cattle_Y_E04770;Parent=Cattle_Y_T01882;Dbxref=GeneID:100336606,GenBank:XM_059884034.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X7;transcript_id=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884034.1-1
haplotype2-0000357	CAT	CDS	57814669	57814842	.	-	0	ID=Cattle_Y_C04155;Parent=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01882;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57817972	57818053	.	-	1	ID=Cattle_Y_C04156;Parent=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01882;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57819991	57820084	.	-	2	ID=Cattle_Y_C04157;Parent=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01882;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57820331	57820426	.	-	2	ID=Cattle_Y_C04158;Parent=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01882;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57820961	57821096	.	-	0	ID=Cattle_Y_C04159;Parent=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01882;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57823050	57823073	.	-	0	ID=Cattle_Y_C04160;Parent=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01882;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57824616	57824749	.	-	2	ID=Cattle_Y_C04161;Parent=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01882;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57826682	57826866	.	-	1	ID=Cattle_Y_C04162;Parent=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01882;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57828246	57828375	.	-	2	ID=Cattle_Y_C04163;Parent=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01882;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57828492	57828615	.	-	0	ID=Cattle_Y_C04164;Parent=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01882;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57830367	57830509	.	-	2	ID=Cattle_Y_C04165;Parent=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01882;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57835096	57835180	.	-	0	ID=Cattle_Y_C04166;Parent=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01882;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57847117	57847198	.	-	1	ID=Cattle_Y_C04167;Parent=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01882;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57852854	57852950	.	-	2	ID=Cattle_Y_C04168;Parent=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01882;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57855125	57855260	.	-	0	ID=Cattle_Y_C04169;Parent=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01882;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57856418	57856447	.	-	0	ID=Cattle_Y_C04170;Parent=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01882;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857132	57857265	.	-	2	ID=Cattle_Y_C04171;Parent=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01882;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857664	57857836	.	-	1	ID=Cattle_Y_C04172;Parent=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01882;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857930	57858000	.	-	0	ID=Cattle_Y_C04173;Parent=Cattle_Y_T01882;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01882;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57812956	57859249	.	-	.	ID=Cattle_Y_T01883;Parent=Cattle_Y_G01088;Dbxref=GeneID:100336606,GenBank:XM_059884035.1,VGNC:VGNC:55042;Name=XM_059884035.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;model_evidence=Supporting evidence includes similarity to: 13 ESTs%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 7 samples with support for all annotated introns;product=colony stimulating factor 2 receptor subunit alpha%2C transcript variant X8;transcript_id=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884035.1
haplotype2-0000357	CAT	exon	57812956	57814842	.	-	.	ID=Cattle_Y_E04771;Parent=Cattle_Y_T01883;Dbxref=GeneID:100336606,GenBank:XM_059884035.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X8;transcript_id=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884035.1-20
haplotype2-0000357	CAT	exon	57817972	57818053	.	-	.	ID=Cattle_Y_E04772;Parent=Cattle_Y_T01883;Dbxref=GeneID:100336606,GenBank:XM_059884035.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X8;transcript_id=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884035.1-20
haplotype2-0000357	CAT	exon	57819991	57820084	.	-	.	ID=Cattle_Y_E04773;Parent=Cattle_Y_T01883;Dbxref=GeneID:100336606,GenBank:XM_059884035.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X8;transcript_id=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884035.1-20
haplotype2-0000357	CAT	exon	57820331	57820426	.	-	.	ID=Cattle_Y_E04774;Parent=Cattle_Y_T01883;Dbxref=GeneID:100336606,GenBank:XM_059884035.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X8;transcript_id=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884035.1-20
haplotype2-0000357	CAT	exon	57820961	57821096	.	-	.	ID=Cattle_Y_E04775;Parent=Cattle_Y_T01883;Dbxref=GeneID:100336606,GenBank:XM_059884035.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X8;transcript_id=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884035.1-20
haplotype2-0000357	CAT	exon	57823050	57823073	.	-	.	ID=Cattle_Y_E04776;Parent=Cattle_Y_T01883;Dbxref=GeneID:100336606,GenBank:XM_059884035.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X8;transcript_id=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884035.1-20
haplotype2-0000357	CAT	exon	57824616	57824749	.	-	.	ID=Cattle_Y_E04777;Parent=Cattle_Y_T01883;Dbxref=GeneID:100336606,GenBank:XM_059884035.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X8;transcript_id=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884035.1-20
haplotype2-0000357	CAT	exon	57826682	57826866	.	-	.	ID=Cattle_Y_E04778;Parent=Cattle_Y_T01883;Dbxref=GeneID:100336606,GenBank:XM_059884035.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X8;transcript_id=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884035.1-20
haplotype2-0000357	CAT	exon	57828246	57828375	.	-	.	ID=Cattle_Y_E04779;Parent=Cattle_Y_T01883;Dbxref=GeneID:100336606,GenBank:XM_059884035.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X8;transcript_id=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884035.1-20
haplotype2-0000357	CAT	exon	57828492	57828615	.	-	.	ID=Cattle_Y_E04780;Parent=Cattle_Y_T01883;Dbxref=GeneID:100336606,GenBank:XM_059884035.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X8;transcript_id=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884035.1-20
haplotype2-0000357	CAT	exon	57830367	57830509	.	-	.	ID=Cattle_Y_E04781;Parent=Cattle_Y_T01883;Dbxref=GeneID:100336606,GenBank:XM_059884035.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X8;transcript_id=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884035.1-20
haplotype2-0000357	CAT	exon	57835096	57835180	.	-	.	ID=Cattle_Y_E04782;Parent=Cattle_Y_T01883;Dbxref=GeneID:100336606,GenBank:XM_059884035.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X8;transcript_id=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884035.1-20
haplotype2-0000357	CAT	exon	57847117	57847198	.	-	.	ID=Cattle_Y_E04783;Parent=Cattle_Y_T01883;Dbxref=GeneID:100336606,GenBank:XM_059884035.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X8;transcript_id=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884035.1-20
haplotype2-0000357	CAT	exon	57852854	57852950	.	-	.	ID=Cattle_Y_E04784;Parent=Cattle_Y_T01883;Dbxref=GeneID:100336606,GenBank:XM_059884035.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X8;transcript_id=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884035.1-20
haplotype2-0000357	CAT	exon	57855125	57855260	.	-	.	ID=Cattle_Y_E04785;Parent=Cattle_Y_T01883;Dbxref=GeneID:100336606,GenBank:XM_059884035.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X8;transcript_id=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884035.1-20
haplotype2-0000357	CAT	exon	57856418	57856447	.	-	.	ID=Cattle_Y_E04786;Parent=Cattle_Y_T01883;Dbxref=GeneID:100336606,GenBank:XM_059884035.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X8;transcript_id=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884035.1-20
haplotype2-0000357	CAT	exon	57857132	57857265	.	-	.	ID=Cattle_Y_E04787;Parent=Cattle_Y_T01883;Dbxref=GeneID:100336606,GenBank:XM_059884035.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X8;transcript_id=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884035.1-20
haplotype2-0000357	CAT	exon	57857664	57857836	.	-	.	ID=Cattle_Y_E04788;Parent=Cattle_Y_T01883;Dbxref=GeneID:100336606,GenBank:XM_059884035.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X8;transcript_id=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884035.1-20
haplotype2-0000357	CAT	exon	57857930	57858052	.	-	.	ID=Cattle_Y_E04789;Parent=Cattle_Y_T01883;Dbxref=GeneID:100336606,GenBank:XM_059884035.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X8;transcript_id=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884035.1-2
haplotype2-0000357	CAT	exon	57859161	57859249	.	-	.	ID=Cattle_Y_E04790;Parent=Cattle_Y_T01883;Dbxref=GeneID:100336606,GenBank:XM_059884035.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X8;transcript_id=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884035.1-1
haplotype2-0000357	CAT	CDS	57814669	57814842	.	-	0	ID=Cattle_Y_C04174;Parent=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01883;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57817972	57818053	.	-	1	ID=Cattle_Y_C04175;Parent=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01883;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57819991	57820084	.	-	2	ID=Cattle_Y_C04176;Parent=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01883;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57820331	57820426	.	-	2	ID=Cattle_Y_C04177;Parent=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01883;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57820961	57821096	.	-	0	ID=Cattle_Y_C04178;Parent=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01883;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57823050	57823073	.	-	0	ID=Cattle_Y_C04179;Parent=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01883;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57824616	57824749	.	-	2	ID=Cattle_Y_C04180;Parent=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01883;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57826682	57826866	.	-	1	ID=Cattle_Y_C04181;Parent=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01883;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57828246	57828375	.	-	2	ID=Cattle_Y_C04182;Parent=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01883;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57828492	57828615	.	-	0	ID=Cattle_Y_C04183;Parent=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01883;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57830367	57830509	.	-	2	ID=Cattle_Y_C04184;Parent=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01883;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57835096	57835180	.	-	0	ID=Cattle_Y_C04185;Parent=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01883;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57847117	57847198	.	-	1	ID=Cattle_Y_C04186;Parent=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01883;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57852854	57852950	.	-	2	ID=Cattle_Y_C04187;Parent=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01883;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57855125	57855260	.	-	0	ID=Cattle_Y_C04188;Parent=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01883;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57856418	57856447	.	-	0	ID=Cattle_Y_C04189;Parent=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01883;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857132	57857265	.	-	2	ID=Cattle_Y_C04190;Parent=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01883;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857664	57857836	.	-	1	ID=Cattle_Y_C04191;Parent=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01883;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857930	57858000	.	-	0	ID=Cattle_Y_C04192;Parent=Cattle_Y_T01883;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01883;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57821007	57868281	.	-	.	ID=Cattle_Y_T01884;Parent=Cattle_Y_G01088;Dbxref=GeneID:100336606,GenBank:XM_059884036.1,VGNC:VGNC:55042;Name=XM_059884036.1;gbkey=mRNA;gene=CSF2RA;model_evidence=Supporting evidence includes similarity to: 16 ESTs%2C 8 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 5 samples with support for all annotated introns;product=colony stimulating factor 2 receptor subunit alpha%2C transcript variant X9;transcript_id=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884036.1
haplotype2-0000357	CAT	exon	57821007	57821096	.	-	.	ID=Cattle_Y_E04791;Parent=Cattle_Y_T01884;Dbxref=GeneID:100336606,GenBank:XM_059884036.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X9;transcript_id=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884036.1-18
haplotype2-0000357	CAT	exon	57823050	57823073	.	-	.	ID=Cattle_Y_E04792;Parent=Cattle_Y_T01884;Dbxref=GeneID:100336606,GenBank:XM_059884036.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X9;transcript_id=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884036.1-17
haplotype2-0000357	CAT	exon	57826682	57826866	.	-	.	ID=Cattle_Y_E04793;Parent=Cattle_Y_T01884;Dbxref=GeneID:100336606,GenBank:XM_059884036.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X9;transcript_id=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884036.1-18
haplotype2-0000357	CAT	exon	57828246	57828375	.	-	.	ID=Cattle_Y_E04794;Parent=Cattle_Y_T01884;Dbxref=GeneID:100336606,GenBank:XM_059884036.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X9;transcript_id=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884036.1-18
haplotype2-0000357	CAT	exon	57828492	57828615	.	-	.	ID=Cattle_Y_E04795;Parent=Cattle_Y_T01884;Dbxref=GeneID:100336606,GenBank:XM_059884036.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X9;transcript_id=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884036.1-18
haplotype2-0000357	CAT	exon	57830367	57830509	.	-	.	ID=Cattle_Y_E04796;Parent=Cattle_Y_T01884;Dbxref=GeneID:100336606,GenBank:XM_059884036.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X9;transcript_id=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884036.1-18
haplotype2-0000357	CAT	exon	57835096	57835180	.	-	.	ID=Cattle_Y_E04797;Parent=Cattle_Y_T01884;Dbxref=GeneID:100336606,GenBank:XM_059884036.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X9;transcript_id=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884036.1-18
haplotype2-0000357	CAT	exon	57847117	57847198	.	-	.	ID=Cattle_Y_E04798;Parent=Cattle_Y_T01884;Dbxref=GeneID:100336606,GenBank:XM_059884036.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X9;transcript_id=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884036.1-18
haplotype2-0000357	CAT	exon	57852854	57852950	.	-	.	ID=Cattle_Y_E04799;Parent=Cattle_Y_T01884;Dbxref=GeneID:100336606,GenBank:XM_059884036.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X9;transcript_id=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884036.1-18
haplotype2-0000357	CAT	exon	57855125	57855260	.	-	.	ID=Cattle_Y_E04800;Parent=Cattle_Y_T01884;Dbxref=GeneID:100336606,GenBank:XM_059884036.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X9;transcript_id=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884036.1-18
haplotype2-0000357	CAT	exon	57856418	57856447	.	-	.	ID=Cattle_Y_E04801;Parent=Cattle_Y_T01884;Dbxref=GeneID:100336606,GenBank:XM_059884036.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X9;transcript_id=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884036.1-18
haplotype2-0000357	CAT	exon	57857132	57857265	.	-	.	ID=Cattle_Y_E04802;Parent=Cattle_Y_T01884;Dbxref=GeneID:100336606,GenBank:XM_059884036.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X9;transcript_id=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884036.1-18
haplotype2-0000357	CAT	exon	57857664	57857836	.	-	.	ID=Cattle_Y_E04803;Parent=Cattle_Y_T01884;Dbxref=GeneID:100336606,GenBank:XM_059884036.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X9;transcript_id=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884036.1-18
haplotype2-0000357	CAT	exon	57857930	57858056	.	-	.	ID=Cattle_Y_E04804;Parent=Cattle_Y_T01884;Dbxref=GeneID:100336606,GenBank:XM_059884036.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X9;transcript_id=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884036.1-18
haplotype2-0000357	CAT	exon	57859161	57859284	.	-	.	ID=Cattle_Y_E04805;Parent=Cattle_Y_T01884;Dbxref=GeneID:100336606,GenBank:XM_059884036.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X9;transcript_id=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884036.1-18
haplotype2-0000357	CAT	exon	57860596	57860738	.	-	.	ID=Cattle_Y_E04806;Parent=Cattle_Y_T01884;Dbxref=GeneID:100336606,GenBank:XM_059884036.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X9;transcript_id=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884036.1-18
haplotype2-0000357	CAT	exon	57861779	57861880	.	-	.	ID=Cattle_Y_E04807;Parent=Cattle_Y_T01884;Dbxref=GeneID:100336606,GenBank:XM_059884036.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X9;transcript_id=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884036.1-18
haplotype2-0000357	CAT	exon	57867606	57868281	.	-	.	ID=Cattle_Y_E04808;Parent=Cattle_Y_T01884;Dbxref=GeneID:100336606,GenBank:XM_059884036.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X9;transcript_id=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884036.1-1
haplotype2-0000357	CAT	CDS	57823060	57823073	.	-	2	ID=Cattle_Y_C04193;Parent=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01884;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57826682	57826866	.	-	1	ID=Cattle_Y_C04194;Parent=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01884;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57828246	57828375	.	-	2	ID=Cattle_Y_C04195;Parent=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01884;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57828492	57828615	.	-	0	ID=Cattle_Y_C04196;Parent=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01884;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57830367	57830509	.	-	2	ID=Cattle_Y_C04197;Parent=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01884;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57835096	57835180	.	-	0	ID=Cattle_Y_C04198;Parent=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01884;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57847117	57847198	.	-	1	ID=Cattle_Y_C04199;Parent=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01884;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57852854	57852950	.	-	2	ID=Cattle_Y_C04200;Parent=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01884;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57855125	57855260	.	-	0	ID=Cattle_Y_C04201;Parent=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01884;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57856418	57856447	.	-	0	ID=Cattle_Y_C04202;Parent=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01884;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857132	57857265	.	-	2	ID=Cattle_Y_C04203;Parent=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01884;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857664	57857836	.	-	1	ID=Cattle_Y_C04204;Parent=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01884;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857930	57858056	.	-	2	ID=Cattle_Y_C04205;Parent=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01884;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57859161	57859284	.	-	0	ID=Cattle_Y_C04206;Parent=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01884;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57860596	57860738	.	-	2	ID=Cattle_Y_C04207;Parent=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01884;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57861779	57861880	.	-	2	ID=Cattle_Y_C04208;Parent=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01884;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57867606	57867816	.	-	0	ID=Cattle_Y_C04209;Parent=Cattle_Y_T01884;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01884;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57824764	57868281	.	-	.	ID=Cattle_Y_T01885;Parent=Cattle_Y_G01088;Dbxref=GeneID:100336606,GenBank:XM_059884037.1,VGNC:VGNC:55042;Name=XM_059884037.1;gbkey=mRNA;gene=CSF2RA;model_evidence=Supporting evidence includes similarity to: 16 ESTs%2C 8 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=colony stimulating factor 2 receptor subunit alpha%2C transcript variant X10;transcript_id=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884037.1
haplotype2-0000357	CAT	exon	57824764	57824786	.	-	.	ID=Cattle_Y_E04809;Parent=Cattle_Y_T01885;Dbxref=GeneID:100336606,GenBank:XM_059884037.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X10;transcript_id=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884037.1-17
haplotype2-0000357	CAT	exon	57826682	57826866	.	-	.	ID=Cattle_Y_E04810;Parent=Cattle_Y_T01885;Dbxref=GeneID:100336606,GenBank:XM_059884037.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X10;transcript_id=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884037.1-17
haplotype2-0000357	CAT	exon	57828246	57828375	.	-	.	ID=Cattle_Y_E04811;Parent=Cattle_Y_T01885;Dbxref=GeneID:100336606,GenBank:XM_059884037.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X10;transcript_id=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884037.1-17
haplotype2-0000357	CAT	exon	57828492	57828615	.	-	.	ID=Cattle_Y_E04812;Parent=Cattle_Y_T01885;Dbxref=GeneID:100336606,GenBank:XM_059884037.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X10;transcript_id=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884037.1-17
haplotype2-0000357	CAT	exon	57830367	57830509	.	-	.	ID=Cattle_Y_E04813;Parent=Cattle_Y_T01885;Dbxref=GeneID:100336606,GenBank:XM_059884037.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X10;transcript_id=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884037.1-17
haplotype2-0000357	CAT	exon	57835096	57835180	.	-	.	ID=Cattle_Y_E04814;Parent=Cattle_Y_T01885;Dbxref=GeneID:100336606,GenBank:XM_059884037.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X10;transcript_id=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884037.1-17
haplotype2-0000357	CAT	exon	57847117	57847198	.	-	.	ID=Cattle_Y_E04815;Parent=Cattle_Y_T01885;Dbxref=GeneID:100336606,GenBank:XM_059884037.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X10;transcript_id=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884037.1-17
haplotype2-0000357	CAT	exon	57852854	57852950	.	-	.	ID=Cattle_Y_E04816;Parent=Cattle_Y_T01885;Dbxref=GeneID:100336606,GenBank:XM_059884037.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X10;transcript_id=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884037.1-17
haplotype2-0000357	CAT	exon	57855125	57855260	.	-	.	ID=Cattle_Y_E04817;Parent=Cattle_Y_T01885;Dbxref=GeneID:100336606,GenBank:XM_059884037.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X10;transcript_id=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884037.1-17
haplotype2-0000357	CAT	exon	57856418	57856447	.	-	.	ID=Cattle_Y_E04818;Parent=Cattle_Y_T01885;Dbxref=GeneID:100336606,GenBank:XM_059884037.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X10;transcript_id=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884037.1-17
haplotype2-0000357	CAT	exon	57857132	57857265	.	-	.	ID=Cattle_Y_E04819;Parent=Cattle_Y_T01885;Dbxref=GeneID:100336606,GenBank:XM_059884037.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X10;transcript_id=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884037.1-17
haplotype2-0000357	CAT	exon	57857664	57857836	.	-	.	ID=Cattle_Y_E04820;Parent=Cattle_Y_T01885;Dbxref=GeneID:100336606,GenBank:XM_059884037.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X10;transcript_id=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884037.1-17
haplotype2-0000357	CAT	exon	57857930	57858056	.	-	.	ID=Cattle_Y_E04821;Parent=Cattle_Y_T01885;Dbxref=GeneID:100336606,GenBank:XM_059884037.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X10;transcript_id=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884037.1-17
haplotype2-0000357	CAT	exon	57859161	57859284	.	-	.	ID=Cattle_Y_E04822;Parent=Cattle_Y_T01885;Dbxref=GeneID:100336606,GenBank:XM_059884037.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X10;transcript_id=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884037.1-17
haplotype2-0000357	CAT	exon	57860596	57860738	.	-	.	ID=Cattle_Y_E04823;Parent=Cattle_Y_T01885;Dbxref=GeneID:100336606,GenBank:XM_059884037.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X10;transcript_id=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884037.1-17
haplotype2-0000357	CAT	exon	57861779	57861880	.	-	.	ID=Cattle_Y_E04824;Parent=Cattle_Y_T01885;Dbxref=GeneID:100336606,GenBank:XM_059884037.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X10;transcript_id=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884037.1-17
haplotype2-0000357	CAT	exon	57867606	57868281	.	-	.	ID=Cattle_Y_E04825;Parent=Cattle_Y_T01885;Dbxref=GeneID:100336606,GenBank:XM_059884037.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X10;transcript_id=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884037.1-1
haplotype2-0000357	CAT	CDS	57824779	57824786	.	-	2	ID=Cattle_Y_C04210;Parent=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01885;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57826682	57826866	.	-	1	ID=Cattle_Y_C04211;Parent=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01885;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57828246	57828375	.	-	2	ID=Cattle_Y_C04212;Parent=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01885;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57828492	57828615	.	-	0	ID=Cattle_Y_C04213;Parent=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01885;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57830367	57830509	.	-	2	ID=Cattle_Y_C04214;Parent=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01885;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57835096	57835180	.	-	0	ID=Cattle_Y_C04215;Parent=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01885;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57847117	57847198	.	-	1	ID=Cattle_Y_C04216;Parent=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01885;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57852854	57852950	.	-	2	ID=Cattle_Y_C04217;Parent=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01885;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57855125	57855260	.	-	0	ID=Cattle_Y_C04218;Parent=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01885;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57856418	57856447	.	-	0	ID=Cattle_Y_C04219;Parent=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01885;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857132	57857265	.	-	2	ID=Cattle_Y_C04220;Parent=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01885;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857664	57857836	.	-	1	ID=Cattle_Y_C04221;Parent=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01885;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857930	57858056	.	-	2	ID=Cattle_Y_C04222;Parent=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01885;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57859161	57859284	.	-	0	ID=Cattle_Y_C04223;Parent=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01885;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57860596	57860738	.	-	2	ID=Cattle_Y_C04224;Parent=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01885;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57861779	57861880	.	-	2	ID=Cattle_Y_C04225;Parent=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01885;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57867606	57867816	.	-	0	ID=Cattle_Y_C04226;Parent=Cattle_Y_T01885;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01885;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57844235	57868270	.	-	.	ID=Cattle_Y_T01886;Parent=Cattle_Y_G01088;Dbxref=GeneID:100336606,GenBank:XM_059884038.1,VGNC:VGNC:55042;Name=XM_059884038.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;model_evidence=Supporting evidence includes similarity to: 25 ESTs%2C 15 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 37 samples with support for all annotated introns;product=colony stimulating factor 2 receptor subunit alpha%2C transcript variant X13;transcript_id=Cattle_Y_T01886;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884038.1
haplotype2-0000357	CAT	exon	57844235	57846006	.	-	.	ID=Cattle_Y_E04826;Parent=Cattle_Y_T01886;Dbxref=GeneID:100336606,GenBank:XM_059884038.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X13;transcript_id=Cattle_Y_T01886;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884038.1-12
haplotype2-0000357	CAT	exon	57847117	57847198	.	-	.	ID=Cattle_Y_E04827;Parent=Cattle_Y_T01886;Dbxref=GeneID:100336606,GenBank:XM_059884038.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X13;transcript_id=Cattle_Y_T01886;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884038.1-12
haplotype2-0000357	CAT	exon	57852854	57852950	.	-	.	ID=Cattle_Y_E04828;Parent=Cattle_Y_T01886;Dbxref=GeneID:100336606,GenBank:XM_059884038.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X13;transcript_id=Cattle_Y_T01886;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884038.1-12
haplotype2-0000357	CAT	exon	57855125	57855260	.	-	.	ID=Cattle_Y_E04829;Parent=Cattle_Y_T01886;Dbxref=GeneID:100336606,GenBank:XM_059884038.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X13;transcript_id=Cattle_Y_T01886;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884038.1-12
haplotype2-0000357	CAT	exon	57856418	57856447	.	-	.	ID=Cattle_Y_E04830;Parent=Cattle_Y_T01886;Dbxref=GeneID:100336606,GenBank:XM_059884038.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X13;transcript_id=Cattle_Y_T01886;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884038.1-12
haplotype2-0000357	CAT	exon	57857132	57857265	.	-	.	ID=Cattle_Y_E04831;Parent=Cattle_Y_T01886;Dbxref=GeneID:100336606,GenBank:XM_059884038.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X13;transcript_id=Cattle_Y_T01886;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884038.1-12
haplotype2-0000357	CAT	exon	57857664	57857836	.	-	.	ID=Cattle_Y_E04832;Parent=Cattle_Y_T01886;Dbxref=GeneID:100336606,GenBank:XM_059884038.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X13;transcript_id=Cattle_Y_T01886;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884038.1-12
haplotype2-0000357	CAT	exon	57857930	57858056	.	-	.	ID=Cattle_Y_E04833;Parent=Cattle_Y_T01886;Dbxref=GeneID:100336606,GenBank:XM_059884038.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X13;transcript_id=Cattle_Y_T01886;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884038.1-12
haplotype2-0000357	CAT	exon	57859161	57859284	.	-	.	ID=Cattle_Y_E04834;Parent=Cattle_Y_T01886;Dbxref=GeneID:100336606,GenBank:XM_059884038.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X13;transcript_id=Cattle_Y_T01886;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884038.1-12
haplotype2-0000357	CAT	exon	57860596	57860738	.	-	.	ID=Cattle_Y_E04835;Parent=Cattle_Y_T01886;Dbxref=GeneID:100336606,GenBank:XM_059884038.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X13;transcript_id=Cattle_Y_T01886;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884038.1-12
haplotype2-0000357	CAT	exon	57861779	57861880	.	-	.	ID=Cattle_Y_E04836;Parent=Cattle_Y_T01886;Dbxref=GeneID:100336606,GenBank:XM_059884038.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X13;transcript_id=Cattle_Y_T01886;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884038.1-12
haplotype2-0000357	CAT	exon	57867606	57868270	.	-	.	ID=Cattle_Y_E04837;Parent=Cattle_Y_T01886;Dbxref=GeneID:100336606,GenBank:XM_059884038.1,VGNC:VGNC:55042;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X13;transcript_id=Cattle_Y_T01886;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884038.1-1
haplotype2-0000357	CAT	CDS	57845911	57846006	.	-	0	ID=Cattle_Y_C04227;Parent=Cattle_Y_T01886;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01886;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57847117	57847198	.	-	1	ID=Cattle_Y_C04228;Parent=Cattle_Y_T01886;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01886;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57852854	57852950	.	-	2	ID=Cattle_Y_C04229;Parent=Cattle_Y_T01886;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01886;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57855125	57855260	.	-	0	ID=Cattle_Y_C04230;Parent=Cattle_Y_T01886;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01886;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57856418	57856447	.	-	0	ID=Cattle_Y_C04231;Parent=Cattle_Y_T01886;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01886;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857132	57857265	.	-	2	ID=Cattle_Y_C04232;Parent=Cattle_Y_T01886;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01886;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857664	57857836	.	-	1	ID=Cattle_Y_C04233;Parent=Cattle_Y_T01886;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01886;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857930	57858056	.	-	2	ID=Cattle_Y_C04234;Parent=Cattle_Y_T01886;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01886;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57859161	57859284	.	-	0	ID=Cattle_Y_C04235;Parent=Cattle_Y_T01886;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01886;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57860596	57860738	.	-	2	ID=Cattle_Y_C04236;Parent=Cattle_Y_T01886;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01886;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57861779	57861880	.	-	2	ID=Cattle_Y_C04237;Parent=Cattle_Y_T01886;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01886;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57867606	57867816	.	-	0	ID=Cattle_Y_C04238;Parent=Cattle_Y_T01886;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01886;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57840337	57868272	.	-	.	ID=Cattle_Y_T01887;Parent=Cattle_Y_G01088;Dbxref=GeneID:100336606,GenBank:XM_059884039.1,VGNC:VGNC:55042;Name=XM_059884039.1;gbkey=mRNA;gene=CSF2RA;model_evidence=Supporting evidence includes similarity to: 16 ESTs%2C 8 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 12 samples with support for all annotated introns;product=colony stimulating factor 2 receptor subunit alpha%2C transcript variant X14;transcript_id=Cattle_Y_T01887;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884039.1
haplotype2-0000357	CAT	exon	57840337	57840419	.	-	.	ID=Cattle_Y_E04838;Parent=Cattle_Y_T01887;Dbxref=GeneID:100336606,GenBank:XM_059884039.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X14;transcript_id=Cattle_Y_T01887;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884039.1-12
haplotype2-0000357	CAT	exon	57847117	57847198	.	-	.	ID=Cattle_Y_E04839;Parent=Cattle_Y_T01887;Dbxref=GeneID:100336606,GenBank:XM_059884039.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X14;transcript_id=Cattle_Y_T01887;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884039.1-12
haplotype2-0000357	CAT	exon	57852854	57852950	.	-	.	ID=Cattle_Y_E04840;Parent=Cattle_Y_T01887;Dbxref=GeneID:100336606,GenBank:XM_059884039.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X14;transcript_id=Cattle_Y_T01887;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884039.1-12
haplotype2-0000357	CAT	exon	57855125	57855260	.	-	.	ID=Cattle_Y_E04841;Parent=Cattle_Y_T01887;Dbxref=GeneID:100336606,GenBank:XM_059884039.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X14;transcript_id=Cattle_Y_T01887;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884039.1-12
haplotype2-0000357	CAT	exon	57856418	57856447	.	-	.	ID=Cattle_Y_E04842;Parent=Cattle_Y_T01887;Dbxref=GeneID:100336606,GenBank:XM_059884039.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X14;transcript_id=Cattle_Y_T01887;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884039.1-12
haplotype2-0000357	CAT	exon	57857132	57857265	.	-	.	ID=Cattle_Y_E04843;Parent=Cattle_Y_T01887;Dbxref=GeneID:100336606,GenBank:XM_059884039.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X14;transcript_id=Cattle_Y_T01887;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884039.1-12
haplotype2-0000357	CAT	exon	57857664	57857836	.	-	.	ID=Cattle_Y_E04844;Parent=Cattle_Y_T01887;Dbxref=GeneID:100336606,GenBank:XM_059884039.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X14;transcript_id=Cattle_Y_T01887;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884039.1-12
haplotype2-0000357	CAT	exon	57857930	57858056	.	-	.	ID=Cattle_Y_E04845;Parent=Cattle_Y_T01887;Dbxref=GeneID:100336606,GenBank:XM_059884039.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X14;transcript_id=Cattle_Y_T01887;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884039.1-12
haplotype2-0000357	CAT	exon	57859161	57859284	.	-	.	ID=Cattle_Y_E04846;Parent=Cattle_Y_T01887;Dbxref=GeneID:100336606,GenBank:XM_059884039.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X14;transcript_id=Cattle_Y_T01887;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884039.1-12
haplotype2-0000357	CAT	exon	57860596	57860738	.	-	.	ID=Cattle_Y_E04847;Parent=Cattle_Y_T01887;Dbxref=GeneID:100336606,GenBank:XM_059884039.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X14;transcript_id=Cattle_Y_T01887;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884039.1-12
haplotype2-0000357	CAT	exon	57861779	57861880	.	-	.	ID=Cattle_Y_E04848;Parent=Cattle_Y_T01887;Dbxref=GeneID:100336606,GenBank:XM_059884039.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X14;transcript_id=Cattle_Y_T01887;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884039.1-12
haplotype2-0000357	CAT	exon	57867606	57868272	.	-	.	ID=Cattle_Y_E04849;Parent=Cattle_Y_T01887;Dbxref=GeneID:100336606,GenBank:XM_059884039.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X14;transcript_id=Cattle_Y_T01887;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884039.1-1
haplotype2-0000357	CAT	CDS	57840354	57840419	.	-	0	ID=Cattle_Y_C04239;Parent=Cattle_Y_T01887;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01887;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57847117	57847198	.	-	1	ID=Cattle_Y_C04240;Parent=Cattle_Y_T01887;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01887;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57852854	57852950	.	-	2	ID=Cattle_Y_C04241;Parent=Cattle_Y_T01887;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01887;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57855125	57855260	.	-	0	ID=Cattle_Y_C04242;Parent=Cattle_Y_T01887;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01887;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57856418	57856447	.	-	0	ID=Cattle_Y_C04243;Parent=Cattle_Y_T01887;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01887;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857132	57857265	.	-	2	ID=Cattle_Y_C04244;Parent=Cattle_Y_T01887;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01887;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857664	57857836	.	-	1	ID=Cattle_Y_C04245;Parent=Cattle_Y_T01887;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01887;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857930	57858056	.	-	2	ID=Cattle_Y_C04246;Parent=Cattle_Y_T01887;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01887;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57859161	57859284	.	-	0	ID=Cattle_Y_C04247;Parent=Cattle_Y_T01887;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01887;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57860596	57860738	.	-	2	ID=Cattle_Y_C04248;Parent=Cattle_Y_T01887;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01887;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57861779	57861880	.	-	2	ID=Cattle_Y_C04249;Parent=Cattle_Y_T01887;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01887;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57867606	57867816	.	-	0	ID=Cattle_Y_C04250;Parent=Cattle_Y_T01887;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01887;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57830392	57868271	.	-	.	ID=Cattle_Y_T01888;Parent=Cattle_Y_G01088;Dbxref=GeneID:100336606,GenBank:XM_059884040.1,VGNC:VGNC:55042;Name=XM_059884040.1;gbkey=mRNA;gene=CSF2RA;model_evidence=Supporting evidence includes similarity to: 16 ESTs%2C 8 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 5 samples with support for all annotated introns;product=colony stimulating factor 2 receptor subunit alpha%2C transcript variant X15;transcript_id=Cattle_Y_T01888;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884040.1
haplotype2-0000357	CAT	exon	57830392	57830509	.	-	.	ID=Cattle_Y_E04850;Parent=Cattle_Y_T01888;Dbxref=GeneID:100336606,GenBank:XM_059884040.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X15;transcript_id=Cattle_Y_T01888;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884040.1-12
haplotype2-0000357	CAT	exon	57847117	57847198	.	-	.	ID=Cattle_Y_E04851;Parent=Cattle_Y_T01888;Dbxref=GeneID:100336606,GenBank:XM_059884040.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X15;transcript_id=Cattle_Y_T01888;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884040.1-12
haplotype2-0000357	CAT	exon	57852854	57852950	.	-	.	ID=Cattle_Y_E04852;Parent=Cattle_Y_T01888;Dbxref=GeneID:100336606,GenBank:XM_059884040.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X15;transcript_id=Cattle_Y_T01888;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884040.1-12
haplotype2-0000357	CAT	exon	57855125	57855260	.	-	.	ID=Cattle_Y_E04853;Parent=Cattle_Y_T01888;Dbxref=GeneID:100336606,GenBank:XM_059884040.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X15;transcript_id=Cattle_Y_T01888;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884040.1-12
haplotype2-0000357	CAT	exon	57856418	57856447	.	-	.	ID=Cattle_Y_E04854;Parent=Cattle_Y_T01888;Dbxref=GeneID:100336606,GenBank:XM_059884040.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X15;transcript_id=Cattle_Y_T01888;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884040.1-12
haplotype2-0000357	CAT	exon	57857132	57857265	.	-	.	ID=Cattle_Y_E04855;Parent=Cattle_Y_T01888;Dbxref=GeneID:100336606,GenBank:XM_059884040.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X15;transcript_id=Cattle_Y_T01888;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884040.1-12
haplotype2-0000357	CAT	exon	57857664	57857836	.	-	.	ID=Cattle_Y_E04856;Parent=Cattle_Y_T01888;Dbxref=GeneID:100336606,GenBank:XM_059884040.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X15;transcript_id=Cattle_Y_T01888;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884040.1-12
haplotype2-0000357	CAT	exon	57857930	57858056	.	-	.	ID=Cattle_Y_E04857;Parent=Cattle_Y_T01888;Dbxref=GeneID:100336606,GenBank:XM_059884040.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X15;transcript_id=Cattle_Y_T01888;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884040.1-12
haplotype2-0000357	CAT	exon	57859161	57859284	.	-	.	ID=Cattle_Y_E04858;Parent=Cattle_Y_T01888;Dbxref=GeneID:100336606,GenBank:XM_059884040.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X15;transcript_id=Cattle_Y_T01888;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884040.1-12
haplotype2-0000357	CAT	exon	57860596	57860738	.	-	.	ID=Cattle_Y_E04859;Parent=Cattle_Y_T01888;Dbxref=GeneID:100336606,GenBank:XM_059884040.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X15;transcript_id=Cattle_Y_T01888;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884040.1-12
haplotype2-0000357	CAT	exon	57861779	57861880	.	-	.	ID=Cattle_Y_E04860;Parent=Cattle_Y_T01888;Dbxref=GeneID:100336606,GenBank:XM_059884040.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X15;transcript_id=Cattle_Y_T01888;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884040.1-12
haplotype2-0000357	CAT	exon	57867606	57868271	.	-	.	ID=Cattle_Y_E04861;Parent=Cattle_Y_T01888;Dbxref=GeneID:100336606,GenBank:XM_059884040.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X15;transcript_id=Cattle_Y_T01888;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884040.1-1
haplotype2-0000357	CAT	CDS	57830483	57830509	.	-	0	ID=Cattle_Y_C04251;Parent=Cattle_Y_T01888;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01888;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57847117	57847198	.	-	1	ID=Cattle_Y_C04252;Parent=Cattle_Y_T01888;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01888;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57852854	57852950	.	-	2	ID=Cattle_Y_C04253;Parent=Cattle_Y_T01888;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01888;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57855125	57855260	.	-	0	ID=Cattle_Y_C04254;Parent=Cattle_Y_T01888;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01888;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57856418	57856447	.	-	0	ID=Cattle_Y_C04255;Parent=Cattle_Y_T01888;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01888;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857132	57857265	.	-	2	ID=Cattle_Y_C04256;Parent=Cattle_Y_T01888;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01888;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857664	57857836	.	-	1	ID=Cattle_Y_C04257;Parent=Cattle_Y_T01888;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01888;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857930	57858056	.	-	2	ID=Cattle_Y_C04258;Parent=Cattle_Y_T01888;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01888;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57859161	57859284	.	-	0	ID=Cattle_Y_C04259;Parent=Cattle_Y_T01888;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01888;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57860596	57860738	.	-	2	ID=Cattle_Y_C04260;Parent=Cattle_Y_T01888;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01888;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57861779	57861880	.	-	2	ID=Cattle_Y_C04261;Parent=Cattle_Y_T01888;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01888;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57867606	57867816	.	-	0	ID=Cattle_Y_C04262;Parent=Cattle_Y_T01888;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01888;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57838583	57868270	.	-	.	ID=Cattle_Y_T01889;Parent=Cattle_Y_G01088;Dbxref=GeneID:100336606,GenBank:XM_059884041.1,VGNC:VGNC:55042;Name=XM_059884041.1;gbkey=mRNA;gene=CSF2RA;model_evidence=Supporting evidence includes similarity to: 17 ESTs%2C 8 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 24 samples with support for all annotated introns;product=colony stimulating factor 2 receptor subunit alpha%2C transcript variant X16;transcript_id=Cattle_Y_T01889;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884041.1
haplotype2-0000357	CAT	exon	57838583	57839304	.	-	.	ID=Cattle_Y_E04862;Parent=Cattle_Y_T01889;Dbxref=GeneID:100336606,GenBank:XM_059884041.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X16;transcript_id=Cattle_Y_T01889;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884041.1-12
haplotype2-0000357	CAT	exon	57847117	57847198	.	-	.	ID=Cattle_Y_E04863;Parent=Cattle_Y_T01889;Dbxref=GeneID:100336606,GenBank:XM_059884041.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X16;transcript_id=Cattle_Y_T01889;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884041.1-12
haplotype2-0000357	CAT	exon	57852854	57852950	.	-	.	ID=Cattle_Y_E04864;Parent=Cattle_Y_T01889;Dbxref=GeneID:100336606,GenBank:XM_059884041.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X16;transcript_id=Cattle_Y_T01889;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884041.1-12
haplotype2-0000357	CAT	exon	57855125	57855260	.	-	.	ID=Cattle_Y_E04865;Parent=Cattle_Y_T01889;Dbxref=GeneID:100336606,GenBank:XM_059884041.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X16;transcript_id=Cattle_Y_T01889;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884041.1-12
haplotype2-0000357	CAT	exon	57856418	57856447	.	-	.	ID=Cattle_Y_E04866;Parent=Cattle_Y_T01889;Dbxref=GeneID:100336606,GenBank:XM_059884041.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X16;transcript_id=Cattle_Y_T01889;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884041.1-12
haplotype2-0000357	CAT	exon	57857132	57857265	.	-	.	ID=Cattle_Y_E04867;Parent=Cattle_Y_T01889;Dbxref=GeneID:100336606,GenBank:XM_059884041.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X16;transcript_id=Cattle_Y_T01889;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884041.1-12
haplotype2-0000357	CAT	exon	57857664	57857836	.	-	.	ID=Cattle_Y_E04868;Parent=Cattle_Y_T01889;Dbxref=GeneID:100336606,GenBank:XM_059884041.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X16;transcript_id=Cattle_Y_T01889;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884041.1-12
haplotype2-0000357	CAT	exon	57857930	57858056	.	-	.	ID=Cattle_Y_E04869;Parent=Cattle_Y_T01889;Dbxref=GeneID:100336606,GenBank:XM_059884041.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X16;transcript_id=Cattle_Y_T01889;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884041.1-12
haplotype2-0000357	CAT	exon	57859161	57859284	.	-	.	ID=Cattle_Y_E04870;Parent=Cattle_Y_T01889;Dbxref=GeneID:100336606,GenBank:XM_059884041.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X16;transcript_id=Cattle_Y_T01889;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884041.1-12
haplotype2-0000357	CAT	exon	57860596	57860738	.	-	.	ID=Cattle_Y_E04871;Parent=Cattle_Y_T01889;Dbxref=GeneID:100336606,GenBank:XM_059884041.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X16;transcript_id=Cattle_Y_T01889;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884041.1-12
haplotype2-0000357	CAT	exon	57861779	57861880	.	-	.	ID=Cattle_Y_E04872;Parent=Cattle_Y_T01889;Dbxref=GeneID:100336606,GenBank:XM_059884041.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X16;transcript_id=Cattle_Y_T01889;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884041.1-12
haplotype2-0000357	CAT	exon	57867606	57868270	.	-	.	ID=Cattle_Y_E04873;Parent=Cattle_Y_T01889;Dbxref=GeneID:100336606,GenBank:XM_059884041.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X16;transcript_id=Cattle_Y_T01889;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884041.1-1
haplotype2-0000357	CAT	CDS	57839293	57839304	.	-	0	ID=Cattle_Y_C04263;Parent=Cattle_Y_T01889;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01889;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57847117	57847198	.	-	1	ID=Cattle_Y_C04264;Parent=Cattle_Y_T01889;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01889;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57852854	57852950	.	-	2	ID=Cattle_Y_C04265;Parent=Cattle_Y_T01889;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01889;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57855125	57855260	.	-	0	ID=Cattle_Y_C04266;Parent=Cattle_Y_T01889;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01889;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57856418	57856447	.	-	0	ID=Cattle_Y_C04267;Parent=Cattle_Y_T01889;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01889;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857132	57857265	.	-	2	ID=Cattle_Y_C04268;Parent=Cattle_Y_T01889;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01889;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857664	57857836	.	-	1	ID=Cattle_Y_C04269;Parent=Cattle_Y_T01889;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01889;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857930	57858056	.	-	2	ID=Cattle_Y_C04270;Parent=Cattle_Y_T01889;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01889;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57859161	57859284	.	-	0	ID=Cattle_Y_C04271;Parent=Cattle_Y_T01889;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01889;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57860596	57860738	.	-	2	ID=Cattle_Y_C04272;Parent=Cattle_Y_T01889;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01889;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57861779	57861880	.	-	2	ID=Cattle_Y_C04273;Parent=Cattle_Y_T01889;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01889;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57867606	57867816	.	-	0	ID=Cattle_Y_C04274;Parent=Cattle_Y_T01889;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01889;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57835126	57868270	.	-	.	ID=Cattle_Y_T01890;Parent=Cattle_Y_G01088;Dbxref=GeneID:100336606,GenBank:XM_059884042.1,VGNC:VGNC:55042;Name=XM_059884042.1;gbkey=mRNA;gene=CSF2RA;model_evidence=Supporting evidence includes similarity to: 16 ESTs%2C 8 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 8 samples with support for all annotated introns;product=colony stimulating factor 2 receptor subunit alpha%2C transcript variant X17;transcript_id=Cattle_Y_T01890;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884042.1
haplotype2-0000357	CAT	exon	57835126	57835186	.	-	.	ID=Cattle_Y_E04874;Parent=Cattle_Y_T01890;Dbxref=GeneID:100336606,GenBank:XM_059884042.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X17;transcript_id=Cattle_Y_T01890;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884042.1-12
haplotype2-0000357	CAT	exon	57847117	57847198	.	-	.	ID=Cattle_Y_E04875;Parent=Cattle_Y_T01890;Dbxref=GeneID:100336606,GenBank:XM_059884042.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X17;transcript_id=Cattle_Y_T01890;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884042.1-12
haplotype2-0000357	CAT	exon	57852854	57852950	.	-	.	ID=Cattle_Y_E04876;Parent=Cattle_Y_T01890;Dbxref=GeneID:100336606,GenBank:XM_059884042.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X17;transcript_id=Cattle_Y_T01890;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884042.1-12
haplotype2-0000357	CAT	exon	57855125	57855260	.	-	.	ID=Cattle_Y_E04877;Parent=Cattle_Y_T01890;Dbxref=GeneID:100336606,GenBank:XM_059884042.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X17;transcript_id=Cattle_Y_T01890;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884042.1-12
haplotype2-0000357	CAT	exon	57856418	57856447	.	-	.	ID=Cattle_Y_E04878;Parent=Cattle_Y_T01890;Dbxref=GeneID:100336606,GenBank:XM_059884042.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X17;transcript_id=Cattle_Y_T01890;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884042.1-12
haplotype2-0000357	CAT	exon	57857132	57857265	.	-	.	ID=Cattle_Y_E04879;Parent=Cattle_Y_T01890;Dbxref=GeneID:100336606,GenBank:XM_059884042.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X17;transcript_id=Cattle_Y_T01890;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884042.1-12
haplotype2-0000357	CAT	exon	57857664	57857836	.	-	.	ID=Cattle_Y_E04880;Parent=Cattle_Y_T01890;Dbxref=GeneID:100336606,GenBank:XM_059884042.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X17;transcript_id=Cattle_Y_T01890;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884042.1-12
haplotype2-0000357	CAT	exon	57857930	57858056	.	-	.	ID=Cattle_Y_E04881;Parent=Cattle_Y_T01890;Dbxref=GeneID:100336606,GenBank:XM_059884042.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X17;transcript_id=Cattle_Y_T01890;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884042.1-12
haplotype2-0000357	CAT	exon	57859161	57859284	.	-	.	ID=Cattle_Y_E04882;Parent=Cattle_Y_T01890;Dbxref=GeneID:100336606,GenBank:XM_059884042.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X17;transcript_id=Cattle_Y_T01890;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884042.1-12
haplotype2-0000357	CAT	exon	57860596	57860738	.	-	.	ID=Cattle_Y_E04883;Parent=Cattle_Y_T01890;Dbxref=GeneID:100336606,GenBank:XM_059884042.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X17;transcript_id=Cattle_Y_T01890;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884042.1-12
haplotype2-0000357	CAT	exon	57861779	57861880	.	-	.	ID=Cattle_Y_E04884;Parent=Cattle_Y_T01890;Dbxref=GeneID:100336606,GenBank:XM_059884042.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X17;transcript_id=Cattle_Y_T01890;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884042.1-12
haplotype2-0000357	CAT	exon	57867606	57868270	.	-	.	ID=Cattle_Y_E04885;Parent=Cattle_Y_T01890;Dbxref=GeneID:100336606,GenBank:XM_059884042.1,VGNC:VGNC:55042;gbkey=mRNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X17;transcript_id=Cattle_Y_T01890;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884042.1-1
haplotype2-0000357	CAT	CDS	57835181	57835186	.	-	0	ID=Cattle_Y_C04275;Parent=Cattle_Y_T01890;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01890;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57847117	57847198	.	-	1	ID=Cattle_Y_C04276;Parent=Cattle_Y_T01890;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01890;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57852854	57852950	.	-	2	ID=Cattle_Y_C04277;Parent=Cattle_Y_T01890;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01890;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57855125	57855260	.	-	0	ID=Cattle_Y_C04278;Parent=Cattle_Y_T01890;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01890;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57856418	57856447	.	-	0	ID=Cattle_Y_C04279;Parent=Cattle_Y_T01890;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01890;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857132	57857265	.	-	2	ID=Cattle_Y_C04280;Parent=Cattle_Y_T01890;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01890;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857664	57857836	.	-	1	ID=Cattle_Y_C04281;Parent=Cattle_Y_T01890;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01890;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57857930	57858056	.	-	2	ID=Cattle_Y_C04282;Parent=Cattle_Y_T01890;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01890;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57859161	57859284	.	-	0	ID=Cattle_Y_C04283;Parent=Cattle_Y_T01890;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01890;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57860596	57860738	.	-	2	ID=Cattle_Y_C04284;Parent=Cattle_Y_T01890;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01890;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57861779	57861880	.	-	2	ID=Cattle_Y_C04285;Parent=Cattle_Y_T01890;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01890;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57867606	57867816	.	-	0	ID=Cattle_Y_C04286;Parent=Cattle_Y_T01890;gene_id=Cattle_Y_G01088;transcript_id=Cattle_Y_T01890;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	transcript	57826777	57868276	.	-	.	ID=Cattle_Y_T01891;Parent=Cattle_Y_G01088;Dbxref=GeneID:100336606,GenBank:XR_009493647.1,VGNC:VGNC:55042;Name=XR_009493647.1;gbkey=misc_RNA;gene=CSF2RA;model_evidence=Supporting evidence includes similarity to: 16 ESTs%2C 8 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 6 samples with support for all annotated introns;product=colony stimulating factor 2 receptor subunit alpha%2C transcript variant X11;transcript_id=Cattle_Y_T01891;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=rna-XR_009493647.1
haplotype2-0000357	CAT	exon	57826777	57826866	.	-	.	ID=Cattle_Y_E04886;Parent=Cattle_Y_T01891;Dbxref=GeneID:100336606,GenBank:XR_009493647.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X11;transcript_id=Cattle_Y_T01891;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493647.1-15
haplotype2-0000357	CAT	exon	57828246	57828375	.	-	.	ID=Cattle_Y_E04887;Parent=Cattle_Y_T01891;Dbxref=GeneID:100336606,GenBank:XR_009493647.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X11;transcript_id=Cattle_Y_T01891;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493647.1-14
haplotype2-0000357	CAT	exon	57830367	57830509	.	-	.	ID=Cattle_Y_E04888;Parent=Cattle_Y_T01891;Dbxref=GeneID:100336606,GenBank:XR_009493647.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X11;transcript_id=Cattle_Y_T01891;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493647.1-13
haplotype2-0000357	CAT	exon	57835096	57835180	.	-	.	ID=Cattle_Y_E04889;Parent=Cattle_Y_T01891;Dbxref=GeneID:100336606,GenBank:XR_009493647.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X11;transcript_id=Cattle_Y_T01891;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493647.1-12
haplotype2-0000357	CAT	exon	57847117	57847198	.	-	.	ID=Cattle_Y_E04890;Parent=Cattle_Y_T01891;Dbxref=GeneID:100336606,GenBank:XR_009493647.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X11;transcript_id=Cattle_Y_T01891;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493647.1-11
haplotype2-0000357	CAT	exon	57852854	57852950	.	-	.	ID=Cattle_Y_E04891;Parent=Cattle_Y_T01891;Dbxref=GeneID:100336606,GenBank:XR_009493647.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X11;transcript_id=Cattle_Y_T01891;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493647.1-10
haplotype2-0000357	CAT	exon	57855125	57855260	.	-	.	ID=Cattle_Y_E04892;Parent=Cattle_Y_T01891;Dbxref=GeneID:100336606,GenBank:XR_009493647.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X11;transcript_id=Cattle_Y_T01891;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493647.1-9
haplotype2-0000357	CAT	exon	57856418	57856447	.	-	.	ID=Cattle_Y_E04893;Parent=Cattle_Y_T01891;Dbxref=GeneID:100336606,GenBank:XR_009493647.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X11;transcript_id=Cattle_Y_T01891;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493647.1-8
haplotype2-0000357	CAT	exon	57857132	57857265	.	-	.	ID=Cattle_Y_E04894;Parent=Cattle_Y_T01891;Dbxref=GeneID:100336606,GenBank:XR_009493647.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X11;transcript_id=Cattle_Y_T01891;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493647.1-7
haplotype2-0000357	CAT	exon	57857664	57857836	.	-	.	ID=Cattle_Y_E04895;Parent=Cattle_Y_T01891;Dbxref=GeneID:100336606,GenBank:XR_009493647.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X11;transcript_id=Cattle_Y_T01891;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493647.1-6
haplotype2-0000357	CAT	exon	57857930	57858056	.	-	.	ID=Cattle_Y_E04896;Parent=Cattle_Y_T01891;Dbxref=GeneID:100336606,GenBank:XR_009493647.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X11;transcript_id=Cattle_Y_T01891;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493647.1-5
haplotype2-0000357	CAT	exon	57859161	57859284	.	-	.	ID=Cattle_Y_E04897;Parent=Cattle_Y_T01891;Dbxref=GeneID:100336606,GenBank:XR_009493647.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X11;transcript_id=Cattle_Y_T01891;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493647.1-4
haplotype2-0000357	CAT	exon	57860596	57860738	.	-	.	ID=Cattle_Y_E04898;Parent=Cattle_Y_T01891;Dbxref=GeneID:100336606,GenBank:XR_009493647.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X11;transcript_id=Cattle_Y_T01891;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493647.1-3
haplotype2-0000357	CAT	exon	57861779	57861880	.	-	.	ID=Cattle_Y_E04899;Parent=Cattle_Y_T01891;Dbxref=GeneID:100336606,GenBank:XR_009493647.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X11;transcript_id=Cattle_Y_T01891;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493647.1-2
haplotype2-0000357	CAT	exon	57867606	57868276	.	-	.	ID=Cattle_Y_E04900;Parent=Cattle_Y_T01891;Dbxref=GeneID:100336606,GenBank:XR_009493647.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X11;transcript_id=Cattle_Y_T01891;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493647.1-1
haplotype2-0000357	CAT	transcript	57828544	57868276	.	-	.	ID=Cattle_Y_T01892;Parent=Cattle_Y_G01088;Dbxref=GeneID:100336606,GenBank:XR_009493648.1,VGNC:VGNC:55042;Name=XR_009493648.1;gbkey=misc_RNA;gene=CSF2RA;model_evidence=Supporting evidence includes similarity to: 16 ESTs%2C 8 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 4 samples with support for all annotated introns;product=colony stimulating factor 2 receptor subunit alpha%2C transcript variant X12;transcript_id=Cattle_Y_T01892;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=rna-XR_009493648.1
haplotype2-0000357	CAT	exon	57828544	57828615	.	-	.	ID=Cattle_Y_E04901;Parent=Cattle_Y_T01892;Dbxref=GeneID:100336606,GenBank:XR_009493648.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X12;transcript_id=Cattle_Y_T01892;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493648.1-15
haplotype2-0000357	CAT	exon	57829952	57830102	.	-	.	ID=Cattle_Y_E04902;Parent=Cattle_Y_T01892;Dbxref=GeneID:100336606,GenBank:XR_009493648.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X12;transcript_id=Cattle_Y_T01892;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493648.1-14
haplotype2-0000357	CAT	exon	57830367	57830509	.	-	.	ID=Cattle_Y_E04903;Parent=Cattle_Y_T01892;Dbxref=GeneID:100336606,GenBank:XR_009493648.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X12;transcript_id=Cattle_Y_T01892;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493648.1-13
haplotype2-0000357	CAT	exon	57835096	57835180	.	-	.	ID=Cattle_Y_E04904;Parent=Cattle_Y_T01892;Dbxref=GeneID:100336606,GenBank:XR_009493648.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X12;transcript_id=Cattle_Y_T01892;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493648.1-12
haplotype2-0000357	CAT	exon	57847117	57847198	.	-	.	ID=Cattle_Y_E04905;Parent=Cattle_Y_T01892;Dbxref=GeneID:100336606,GenBank:XR_009493648.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X12;transcript_id=Cattle_Y_T01892;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493648.1-11
haplotype2-0000357	CAT	exon	57852854	57852950	.	-	.	ID=Cattle_Y_E04906;Parent=Cattle_Y_T01892;Dbxref=GeneID:100336606,GenBank:XR_009493648.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X12;transcript_id=Cattle_Y_T01892;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493648.1-10
haplotype2-0000357	CAT	exon	57855125	57855260	.	-	.	ID=Cattle_Y_E04907;Parent=Cattle_Y_T01892;Dbxref=GeneID:100336606,GenBank:XR_009493648.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X12;transcript_id=Cattle_Y_T01892;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493648.1-9
haplotype2-0000357	CAT	exon	57856418	57856447	.	-	.	ID=Cattle_Y_E04908;Parent=Cattle_Y_T01892;Dbxref=GeneID:100336606,GenBank:XR_009493648.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X12;transcript_id=Cattle_Y_T01892;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493648.1-8
haplotype2-0000357	CAT	exon	57857132	57857265	.	-	.	ID=Cattle_Y_E04909;Parent=Cattle_Y_T01892;Dbxref=GeneID:100336606,GenBank:XR_009493648.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X12;transcript_id=Cattle_Y_T01892;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493648.1-7
haplotype2-0000357	CAT	exon	57857664	57857836	.	-	.	ID=Cattle_Y_E04910;Parent=Cattle_Y_T01892;Dbxref=GeneID:100336606,GenBank:XR_009493648.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X12;transcript_id=Cattle_Y_T01892;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493648.1-6
haplotype2-0000357	CAT	exon	57857930	57858056	.	-	.	ID=Cattle_Y_E04911;Parent=Cattle_Y_T01892;Dbxref=GeneID:100336606,GenBank:XR_009493648.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X12;transcript_id=Cattle_Y_T01892;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493648.1-5
haplotype2-0000357	CAT	exon	57859161	57859284	.	-	.	ID=Cattle_Y_E04912;Parent=Cattle_Y_T01892;Dbxref=GeneID:100336606,GenBank:XR_009493648.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X12;transcript_id=Cattle_Y_T01892;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493648.1-4
haplotype2-0000357	CAT	exon	57860596	57860738	.	-	.	ID=Cattle_Y_E04913;Parent=Cattle_Y_T01892;Dbxref=GeneID:100336606,GenBank:XR_009493648.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X12;transcript_id=Cattle_Y_T01892;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493648.1-3
haplotype2-0000357	CAT	exon	57861779	57861880	.	-	.	ID=Cattle_Y_E04914;Parent=Cattle_Y_T01892;Dbxref=GeneID:100336606,GenBank:XR_009493648.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X12;transcript_id=Cattle_Y_T01892;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493648.1-2
haplotype2-0000357	CAT	exon	57867606	57868276	.	-	.	ID=Cattle_Y_E04915;Parent=Cattle_Y_T01892;Dbxref=GeneID:100336606,GenBank:XR_009493648.1,VGNC:VGNC:55042;gbkey=misc_RNA;gene=CSF2RA;product=colony stimulating factor 2 receptor subunit alpha, transcript variant X12;transcript_id=Cattle_Y_T01892;gene_id=Cattle_Y_G01088;gene_biotype=protein_coding;transcript_biotype=likely_pseudogene;source_id=exon-XR_009493648.1-1
haplotype2-0000357	CAT	gene	57895152	57913839	.	+	.	ID=Cattle_Y_G01089;Dbxref=GeneID:132342113;Name=CRLF2;description=cytokine receptor like factor 2;gbkey=Gene;gene=CRLF2;gene_biotype=protein_coding;gene_id=Cattle_Y_G01089;source_id=gene-CRLF2
haplotype2-0000357	CAT	mRNA	57895152	57913839	.	+	.	ID=Cattle_Y_T01893;Parent=Cattle_Y_G01089;Dbxref=GeneID:132342113,GenBank:XM_059884026.1;Name=XM_059884026.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CRLF2;model_evidence=Supporting evidence includes similarity to: 5 ESTs%2C 4 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 26 samples with support for all annotated introns;product=cytokine receptor like factor 2%2C transcript variant X1;transcript_id=Cattle_Y_T01893;gene_id=Cattle_Y_G01089;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884026.1
haplotype2-0000357	CAT	exon	57895152	57895312	.	+	.	ID=Cattle_Y_E04916;Parent=Cattle_Y_T01893;Dbxref=GeneID:132342113,GenBank:XM_059884026.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CRLF2;product=cytokine receptor like factor 2, transcript variant X1;transcript_id=Cattle_Y_T01893;gene_id=Cattle_Y_G01089;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884026.1-1
haplotype2-0000357	CAT	exon	57900263	57900365	.	+	.	ID=Cattle_Y_E04917;Parent=Cattle_Y_T01893;Dbxref=GeneID:132342113,GenBank:XM_059884026.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CRLF2;product=cytokine receptor like factor 2, transcript variant X1;transcript_id=Cattle_Y_T01893;gene_id=Cattle_Y_G01089;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884026.1-1
haplotype2-0000357	CAT	exon	57902351	57902514	.	+	.	ID=Cattle_Y_E04918;Parent=Cattle_Y_T01893;Dbxref=GeneID:132342113,GenBank:XM_059884026.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CRLF2;product=cytokine receptor like factor 2, transcript variant X1;transcript_id=Cattle_Y_T01893;gene_id=Cattle_Y_G01089;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884026.1-1
haplotype2-0000357	CAT	exon	57903616	57903749	.	+	.	ID=Cattle_Y_E04919;Parent=Cattle_Y_T01893;Dbxref=GeneID:132342113,GenBank:XM_059884026.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CRLF2;product=cytokine receptor like factor 2, transcript variant X1;transcript_id=Cattle_Y_T01893;gene_id=Cattle_Y_G01089;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884026.1-1
haplotype2-0000357	CAT	exon	57904558	57904720	.	+	.	ID=Cattle_Y_E04920;Parent=Cattle_Y_T01893;Dbxref=GeneID:132342113,GenBank:XM_059884026.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CRLF2;product=cytokine receptor like factor 2, transcript variant X1;transcript_id=Cattle_Y_T01893;gene_id=Cattle_Y_G01089;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884026.1-1
haplotype2-0000357	CAT	exon	57905880	57905985	.	+	.	ID=Cattle_Y_E04921;Parent=Cattle_Y_T01893;Dbxref=GeneID:132342113,GenBank:XM_059884026.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CRLF2;product=cytokine receptor like factor 2, transcript variant X1;transcript_id=Cattle_Y_T01893;gene_id=Cattle_Y_G01089;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884026.1-1
haplotype2-0000357	CAT	exon	57908489	57908573	.	+	.	ID=Cattle_Y_E04922;Parent=Cattle_Y_T01893;Dbxref=GeneID:132342113,GenBank:XM_059884026.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CRLF2;product=cytokine receptor like factor 2, transcript variant X1;transcript_id=Cattle_Y_T01893;gene_id=Cattle_Y_G01089;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884026.1-1
haplotype2-0000357	CAT	exon	57912425	57913839	.	+	.	ID=Cattle_Y_E04923;Parent=Cattle_Y_T01893;Dbxref=GeneID:132342113,GenBank:XM_059884026.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CRLF2;product=cytokine receptor like factor 2, transcript variant X1;transcript_id=Cattle_Y_T01893;gene_id=Cattle_Y_G01089;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884026.1-8
haplotype2-0000357	CAT	CDS	57895174	57895312	.	+	0	ID=Cattle_Y_C04287;Parent=Cattle_Y_T01893;gene_id=Cattle_Y_G01089;transcript_id=Cattle_Y_T01893;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57900263	57900365	.	+	2	ID=Cattle_Y_C04288;Parent=Cattle_Y_T01893;gene_id=Cattle_Y_G01089;transcript_id=Cattle_Y_T01893;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57902351	57902514	.	+	1	ID=Cattle_Y_C04289;Parent=Cattle_Y_T01893;gene_id=Cattle_Y_G01089;transcript_id=Cattle_Y_T01893;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57903616	57903749	.	+	2	ID=Cattle_Y_C04290;Parent=Cattle_Y_T01893;gene_id=Cattle_Y_G01089;transcript_id=Cattle_Y_T01893;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57904558	57904720	.	+	0	ID=Cattle_Y_C04291;Parent=Cattle_Y_T01893;gene_id=Cattle_Y_G01089;transcript_id=Cattle_Y_T01893;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57905880	57905985	.	+	2	ID=Cattle_Y_C04292;Parent=Cattle_Y_T01893;gene_id=Cattle_Y_G01089;transcript_id=Cattle_Y_T01893;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57908489	57908573	.	+	1	ID=Cattle_Y_C04293;Parent=Cattle_Y_T01893;gene_id=Cattle_Y_G01089;transcript_id=Cattle_Y_T01893;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57912425	57912700	.	+	0	ID=Cattle_Y_C04294;Parent=Cattle_Y_T01893;gene_id=Cattle_Y_G01089;transcript_id=Cattle_Y_T01893;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	57895152	57913839	.	+	.	ID=Cattle_Y_T01894;Parent=Cattle_Y_G01089;Dbxref=GeneID:132342113,GenBank:XM_059884027.1;Name=XM_059884027.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CRLF2;model_evidence=Supporting evidence includes similarity to: 5 ESTs%2C 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 11 samples with support for all annotated introns;product=cytokine receptor like factor 2%2C transcript variant X2;transcript_id=Cattle_Y_T01894;gene_id=Cattle_Y_G01089;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884027.1
haplotype2-0000357	CAT	exon	57895152	57895312	.	+	.	ID=Cattle_Y_E04924;Parent=Cattle_Y_T01894;Dbxref=GeneID:132342113,GenBank:XM_059884027.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CRLF2;product=cytokine receptor like factor 2, transcript variant X2;transcript_id=Cattle_Y_T01894;gene_id=Cattle_Y_G01089;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884027.1-1
haplotype2-0000357	CAT	exon	57900263	57900365	.	+	.	ID=Cattle_Y_E04925;Parent=Cattle_Y_T01894;Dbxref=GeneID:132342113,GenBank:XM_059884027.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CRLF2;product=cytokine receptor like factor 2, transcript variant X2;transcript_id=Cattle_Y_T01894;gene_id=Cattle_Y_G01089;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884027.1-2
haplotype2-0000357	CAT	exon	57903616	57903749	.	+	.	ID=Cattle_Y_E04926;Parent=Cattle_Y_T01894;Dbxref=GeneID:132342113,GenBank:XM_059884027.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CRLF2;product=cytokine receptor like factor 2, transcript variant X2;transcript_id=Cattle_Y_T01894;gene_id=Cattle_Y_G01089;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884027.1-3
haplotype2-0000357	CAT	exon	57904558	57904720	.	+	.	ID=Cattle_Y_E04927;Parent=Cattle_Y_T01894;Dbxref=GeneID:132342113,GenBank:XM_059884027.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CRLF2;product=cytokine receptor like factor 2, transcript variant X2;transcript_id=Cattle_Y_T01894;gene_id=Cattle_Y_G01089;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884027.1-4
haplotype2-0000357	CAT	exon	57905880	57905985	.	+	.	ID=Cattle_Y_E04928;Parent=Cattle_Y_T01894;Dbxref=GeneID:132342113,GenBank:XM_059884027.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CRLF2;product=cytokine receptor like factor 2, transcript variant X2;transcript_id=Cattle_Y_T01894;gene_id=Cattle_Y_G01089;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884027.1-5
haplotype2-0000357	CAT	exon	57908489	57908573	.	+	.	ID=Cattle_Y_E04929;Parent=Cattle_Y_T01894;Dbxref=GeneID:132342113,GenBank:XM_059884027.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CRLF2;product=cytokine receptor like factor 2, transcript variant X2;transcript_id=Cattle_Y_T01894;gene_id=Cattle_Y_G01089;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884027.1-6
haplotype2-0000357	CAT	exon	57912425	57913839	.	+	.	ID=Cattle_Y_E04930;Parent=Cattle_Y_T01894;Dbxref=GeneID:132342113,GenBank:XM_059884027.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=mRNA;gene=CRLF2;product=cytokine receptor like factor 2, transcript variant X2;transcript_id=Cattle_Y_T01894;gene_id=Cattle_Y_G01089;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884027.1-7
haplotype2-0000357	CAT	CDS	57900335	57900365	.	+	0	ID=Cattle_Y_C04295;Parent=Cattle_Y_T01894;Dbxref=GeneID:132342113,GenBank:XP_059740010.1;Name=XP_059740010.1;gbkey=CDS;gene=CRLF2;product=cytokine receptor-like factor 2 isoform X2;protein_id=XP_059740010.1;gene_id=Cattle_Y_G01089;transcript_id=Cattle_Y_T01894;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57903616	57903749	.	+	2	ID=Cattle_Y_C04296;Parent=Cattle_Y_T01894;Dbxref=GeneID:132342113,GenBank:XP_059740010.1;Name=XP_059740010.1;gbkey=CDS;gene=CRLF2;product=cytokine receptor-like factor 2 isoform X2;protein_id=XP_059740010.1;gene_id=Cattle_Y_G01089;transcript_id=Cattle_Y_T01894;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57904558	57904720	.	+	0	ID=Cattle_Y_C04297;Parent=Cattle_Y_T01894;Dbxref=GeneID:132342113,GenBank:XP_059740010.1;Name=XP_059740010.1;gbkey=CDS;gene=CRLF2;product=cytokine receptor-like factor 2 isoform X2;protein_id=XP_059740010.1;gene_id=Cattle_Y_G01089;transcript_id=Cattle_Y_T01894;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57905880	57905985	.	+	2	ID=Cattle_Y_C04298;Parent=Cattle_Y_T01894;Dbxref=GeneID:132342113,GenBank:XP_059740010.1;Name=XP_059740010.1;gbkey=CDS;gene=CRLF2;product=cytokine receptor-like factor 2 isoform X2;protein_id=XP_059740010.1;gene_id=Cattle_Y_G01089;transcript_id=Cattle_Y_T01894;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57908489	57908573	.	+	1	ID=Cattle_Y_C04299;Parent=Cattle_Y_T01894;Dbxref=GeneID:132342113,GenBank:XP_059740010.1;Name=XP_059740010.1;gbkey=CDS;gene=CRLF2;product=cytokine receptor-like factor 2 isoform X2;protein_id=XP_059740010.1;gene_id=Cattle_Y_G01089;transcript_id=Cattle_Y_T01894;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	57912425	57912700	.	+	0	ID=Cattle_Y_C04300;Parent=Cattle_Y_T01894;Dbxref=GeneID:132342113,GenBank:XP_059740010.1;Name=XP_059740010.1;gbkey=CDS;gene=CRLF2;product=cytokine receptor-like factor 2 isoform X2;protein_id=XP_059740010.1;gene_id=Cattle_Y_G01089;transcript_id=Cattle_Y_T01894;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	58223696	58235508	.	-	.	ID=Cattle_Y_G01090;Dbxref=GeneID:132344459;Name=LOC132344459;description=short stature homeobox protein;gbkey=Gene;gene=LOC132344459;gene_biotype=protein_coding;gene_id=Cattle_Y_G01090;source_id=gene-LOC132344459
haplotype2-0000357	CAT	mRNA	58226030	58235508	.	-	.	ID=Cattle_Y_T01895;Parent=Cattle_Y_G01090;Dbxref=GeneID:132344459,GenBank:XM_059884012.1;Name=XM_059884012.1;gbkey=mRNA;gene=LOC132344459;model_evidence=Supporting evidence includes similarity to: 1 Protein%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 5 samples with support for all annotated introns;product=short stature homeobox protein%2C transcript variant X1;transcript_id=Cattle_Y_T01895;gene_id=Cattle_Y_G01090;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884012.1
haplotype2-0000357	CAT	exon	58226030	58226555	.	-	.	ID=Cattle_Y_E04931;Parent=Cattle_Y_T01895;Dbxref=GeneID:132344459,GenBank:XM_059884012.1;gbkey=mRNA;gene=LOC132344459;product=short stature homeobox protein, transcript variant X1;transcript_id=Cattle_Y_T01895;gene_id=Cattle_Y_G01090;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884012.1-4
haplotype2-0000357	CAT	exon	58226790	58226847	.	-	.	ID=Cattle_Y_E04932;Parent=Cattle_Y_T01895;Dbxref=GeneID:132344459,GenBank:XM_059884012.1;gbkey=mRNA;gene=LOC132344459;product=short stature homeobox protein, transcript variant X1;transcript_id=Cattle_Y_T01895;gene_id=Cattle_Y_G01090;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884012.1-3
haplotype2-0000357	CAT	exon	58230842	58231050	.	-	.	ID=Cattle_Y_E04933;Parent=Cattle_Y_T01895;Dbxref=GeneID:132344459,GenBank:XM_059884012.1;gbkey=mRNA;gene=LOC132344459;product=short stature homeobox protein, transcript variant X1;transcript_id=Cattle_Y_T01895;gene_id=Cattle_Y_G01090;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884012.1-2
haplotype2-0000357	CAT	exon	58234816	58235508	.	-	.	ID=Cattle_Y_E04934;Parent=Cattle_Y_T01895;Dbxref=GeneID:132344459,GenBank:XM_059884012.1;gbkey=mRNA;gene=LOC132344459;product=short stature homeobox protein, transcript variant X1;transcript_id=Cattle_Y_T01895;gene_id=Cattle_Y_G01090;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884012.1-1
haplotype2-0000357	CAT	CDS	58226092	58226555	.	-	2	ID=Cattle_Y_C04301;Parent=Cattle_Y_T01895;Dbxref=GeneID:132344459,GenBank:XP_059739995.1;Name=XP_059739995.1;gbkey=CDS;gene=LOC132344459;product=short stature homeobox protein isoform X1;protein_id=XP_059739995.1;gene_id=Cattle_Y_G01090;transcript_id=Cattle_Y_T01895;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58226790	58226847	.	-	0	ID=Cattle_Y_C04302;Parent=Cattle_Y_T01895;Dbxref=GeneID:132344459,GenBank:XP_059739995.1;Name=XP_059739995.1;gbkey=CDS;gene=LOC132344459;product=short stature homeobox protein isoform X1;protein_id=XP_059739995.1;gene_id=Cattle_Y_G01090;transcript_id=Cattle_Y_T01895;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58230842	58231050	.	-	2	ID=Cattle_Y_C04303;Parent=Cattle_Y_T01895;Dbxref=GeneID:132344459,GenBank:XP_059739995.1;Name=XP_059739995.1;gbkey=CDS;gene=LOC132344459;product=short stature homeobox protein isoform X1;protein_id=XP_059739995.1;gene_id=Cattle_Y_G01090;transcript_id=Cattle_Y_T01895;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58234816	58235098	.	-	0	ID=Cattle_Y_C04304;Parent=Cattle_Y_T01895;Dbxref=GeneID:132344459,GenBank:XP_059739995.1;Name=XP_059739995.1;gbkey=CDS;gene=LOC132344459;product=short stature homeobox protein isoform X1;protein_id=XP_059739995.1;gene_id=Cattle_Y_G01090;transcript_id=Cattle_Y_T01895;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	58223696	58235508	.	-	.	ID=Cattle_Y_T01896;Parent=Cattle_Y_G01090;Dbxref=GeneID:132344459,GenBank:XM_059884013.1;Name=XM_059884013.1;gbkey=mRNA;gene=LOC132344459;model_evidence=Supporting evidence includes similarity to: 5 Proteins%2C and 86%25 coverage of the annotated genomic feature by RNAseq alignments;product=short stature homeobox protein%2C transcript variant X2;transcript_id=Cattle_Y_T01896;gene_id=Cattle_Y_G01090;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884013.1
haplotype2-0000357	CAT	exon	58223696	58223969	.	-	.	ID=Cattle_Y_E04935;Parent=Cattle_Y_T01896;Dbxref=GeneID:132344459,GenBank:XM_059884013.1;gbkey=mRNA;gene=LOC132344459;product=short stature homeobox protein, transcript variant X2;transcript_id=Cattle_Y_T01896;gene_id=Cattle_Y_G01090;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884013.1-5
haplotype2-0000357	CAT	exon	58226459	58226555	.	-	.	ID=Cattle_Y_E04936;Parent=Cattle_Y_T01896;Dbxref=GeneID:132344459,GenBank:XM_059884013.1;gbkey=mRNA;gene=LOC132344459;product=short stature homeobox protein, transcript variant X2;transcript_id=Cattle_Y_T01896;gene_id=Cattle_Y_G01090;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884013.1-4
haplotype2-0000357	CAT	exon	58226790	58226847	.	-	.	ID=Cattle_Y_E04937;Parent=Cattle_Y_T01896;Dbxref=GeneID:132344459,GenBank:XM_059884013.1;gbkey=mRNA;gene=LOC132344459;product=short stature homeobox protein, transcript variant X2;transcript_id=Cattle_Y_T01896;gene_id=Cattle_Y_G01090;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884013.1-3
haplotype2-0000357	CAT	exon	58230842	58231050	.	-	.	ID=Cattle_Y_E04938;Parent=Cattle_Y_T01896;Dbxref=GeneID:132344459,GenBank:XM_059884013.1;gbkey=mRNA;gene=LOC132344459;product=short stature homeobox protein, transcript variant X2;transcript_id=Cattle_Y_T01896;gene_id=Cattle_Y_G01090;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884013.1-2
haplotype2-0000357	CAT	exon	58234816	58235508	.	-	.	ID=Cattle_Y_E04939;Parent=Cattle_Y_T01896;Dbxref=GeneID:132344459,GenBank:XM_059884013.1;gbkey=mRNA;gene=LOC132344459;product=short stature homeobox protein, transcript variant X2;transcript_id=Cattle_Y_T01896;gene_id=Cattle_Y_G01090;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884013.1-1
haplotype2-0000357	CAT	CDS	58223696	58223969	.	-	1	ID=Cattle_Y_C04305;Parent=Cattle_Y_T01896;Dbxref=GeneID:132344459,GenBank:XP_059739996.1;Name=XP_059739996.1;gbkey=CDS;gene=LOC132344459;product=short stature homeobox protein isoform X2;protein_id=XP_059739996.1;gene_id=Cattle_Y_G01090;transcript_id=Cattle_Y_T01896;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58226459	58226555	.	-	2	ID=Cattle_Y_C04306;Parent=Cattle_Y_T01896;Dbxref=GeneID:132344459,GenBank:XP_059739996.1;Name=XP_059739996.1;gbkey=CDS;gene=LOC132344459;product=short stature homeobox protein isoform X2;protein_id=XP_059739996.1;gene_id=Cattle_Y_G01090;transcript_id=Cattle_Y_T01896;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58226790	58226847	.	-	0	ID=Cattle_Y_C04307;Parent=Cattle_Y_T01896;Dbxref=GeneID:132344459,GenBank:XP_059739996.1;Name=XP_059739996.1;gbkey=CDS;gene=LOC132344459;product=short stature homeobox protein isoform X2;protein_id=XP_059739996.1;gene_id=Cattle_Y_G01090;transcript_id=Cattle_Y_T01896;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58230842	58231050	.	-	2	ID=Cattle_Y_C04308;Parent=Cattle_Y_T01896;Dbxref=GeneID:132344459,GenBank:XP_059739996.1;Name=XP_059739996.1;gbkey=CDS;gene=LOC132344459;product=short stature homeobox protein isoform X2;protein_id=XP_059739996.1;gene_id=Cattle_Y_G01090;transcript_id=Cattle_Y_T01896;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58234816	58235098	.	-	0	ID=Cattle_Y_C04309;Parent=Cattle_Y_T01896;Dbxref=GeneID:132344459,GenBank:XP_059739996.1;Name=XP_059739996.1;gbkey=CDS;gene=LOC132344459;product=short stature homeobox protein isoform X2;protein_id=XP_059739996.1;gene_id=Cattle_Y_G01090;transcript_id=Cattle_Y_T01896;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	58410340	58414571	.	-	.	ID=Cattle_Y_G01091;Dbxref=GeneID:132344458;Name=LOC132344458;description=uncharacterized LOC132344458;gbkey=Gene;gene=LOC132344458;gene_biotype=lncRNA;gene_id=Cattle_Y_G01091;source_id=gene-LOC132344458
haplotype2-0000357	CAT	lnc_RNA	58410340	58414571	.	-	.	ID=Cattle_Y_T01897;Parent=Cattle_Y_G01091;Dbxref=GeneID:132344458,GenBank:XR_009493642.1;Name=XR_009493642.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=ncRNA;gene=LOC132344458;model_evidence=Supporting evidence includes similarity to: 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 15 samples with support for all annotated introns;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01897;gene_id=Cattle_Y_G01091;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=rna-XR_009493642.1
haplotype2-0000357	CAT	exon	58410340	58413883	.	-	.	ID=Cattle_Y_E04940;Parent=Cattle_Y_T01897;Dbxref=GeneID:132344458,GenBank:XR_009493642.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=ncRNA;gene=LOC132344458;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01897;gene_id=Cattle_Y_G01091;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493642.1-2
haplotype2-0000357	CAT	exon	58414466	58414571	.	-	.	ID=Cattle_Y_E04941;Parent=Cattle_Y_T01897;Dbxref=GeneID:132344458,GenBank:XR_009493642.1;experiment=COORDINATES: polyA evidence [ECO:0006239];gbkey=ncRNA;gene=LOC132344458;product=uncharacterized lncRNA;transcript_id=Cattle_Y_T01897;gene_id=Cattle_Y_G01091;gene_biotype=lncRNA;transcript_biotype=lncRNA;source_id=exon-XR_009493642.1-1
haplotype2-0000357	CAT	gene	58414641	58455619	.	+	.	ID=Cattle_Y_G01092;Dbxref=GeneID:132342097;Name=LOC132342097;description=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta;gbkey=Gene;gene=LOC132342097;gene_biotype=protein_coding;gene_id=Cattle_Y_G01092;source_id=gene-LOC132342097
haplotype2-0000357	CAT	mRNA	58414641	58455619	.	+	.	ID=Cattle_Y_T01898;Parent=Cattle_Y_G01092;Dbxref=GeneID:132342097,GenBank:XM_059884009.1;Name=XM_059884009.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;model_evidence=Supporting evidence includes similarity to: 14 ESTs%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 5 samples with support for all annotated introns;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta%2C transcript variant X1;transcript_id=Cattle_Y_T01898;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884009.1
haplotype2-0000357	CAT	exon	58414641	58415763	.	+	.	ID=Cattle_Y_E04942;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XM_059884009.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X1;transcript_id=Cattle_Y_T01898;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884009.1-1
haplotype2-0000357	CAT	exon	58416642	58416707	.	+	.	ID=Cattle_Y_E04943;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XM_059884009.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X1;transcript_id=Cattle_Y_T01898;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884009.1-2
haplotype2-0000357	CAT	exon	58430148	58430333	.	+	.	ID=Cattle_Y_E04944;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XM_059884009.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X1;transcript_id=Cattle_Y_T01898;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884009.1-3
haplotype2-0000357	CAT	exon	58444846	58444949	.	+	.	ID=Cattle_Y_E04945;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XM_059884009.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X1;transcript_id=Cattle_Y_T01898;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884009.1-4
haplotype2-0000357	CAT	exon	58445219	58445321	.	+	.	ID=Cattle_Y_E04946;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XM_059884009.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X1;transcript_id=Cattle_Y_T01898;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884009.1-5
haplotype2-0000357	CAT	exon	58446263	58446337	.	+	.	ID=Cattle_Y_E04947;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XM_059884009.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X1;transcript_id=Cattle_Y_T01898;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884009.1-6
haplotype2-0000357	CAT	exon	58447623	58447709	.	+	.	ID=Cattle_Y_E04948;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XM_059884009.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X1;transcript_id=Cattle_Y_T01898;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884009.1-7
haplotype2-0000357	CAT	exon	58448150	58448306	.	+	.	ID=Cattle_Y_E04949;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XM_059884009.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X1;transcript_id=Cattle_Y_T01898;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884009.1-8
haplotype2-0000357	CAT	exon	58451968	58452016	.	+	.	ID=Cattle_Y_E04950;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XM_059884009.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X1;transcript_id=Cattle_Y_T01898;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884009.1-9
haplotype2-0000357	CAT	exon	58452625	58452714	.	+	.	ID=Cattle_Y_E04951;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XM_059884009.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X1;transcript_id=Cattle_Y_T01898;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884009.1-10
haplotype2-0000357	CAT	exon	58453044	58453219	.	+	.	ID=Cattle_Y_E04952;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XM_059884009.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X1;transcript_id=Cattle_Y_T01898;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884009.1-11
haplotype2-0000357	CAT	exon	58453958	58454076	.	+	.	ID=Cattle_Y_E04953;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XM_059884009.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X1;transcript_id=Cattle_Y_T01898;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884009.1-12
haplotype2-0000357	CAT	exon	58454179	58454285	.	+	.	ID=Cattle_Y_E04954;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XM_059884009.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X1;transcript_id=Cattle_Y_T01898;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884009.1-13
haplotype2-0000357	CAT	exon	58454958	58455619	.	+	.	ID=Cattle_Y_E04955;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XM_059884009.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X1;transcript_id=Cattle_Y_T01898;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884009.1-14
haplotype2-0000357	CAT	CDS	58415434	58415763	.	+	0	ID=Cattle_Y_C04310;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XP_059739992.1;Name=XP_059739992.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1;protein_id=XP_059739992.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01898;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58416642	58416707	.	+	0	ID=Cattle_Y_C04311;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XP_059739992.1;Name=XP_059739992.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1;protein_id=XP_059739992.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01898;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58430148	58430333	.	+	0	ID=Cattle_Y_C04312;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XP_059739992.1;Name=XP_059739992.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1;protein_id=XP_059739992.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01898;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58444846	58444949	.	+	0	ID=Cattle_Y_C04313;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XP_059739992.1;Name=XP_059739992.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1;protein_id=XP_059739992.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01898;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58445219	58445321	.	+	1	ID=Cattle_Y_C04314;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XP_059739992.1;Name=XP_059739992.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1;protein_id=XP_059739992.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01898;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58446263	58446337	.	+	0	ID=Cattle_Y_C04315;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XP_059739992.1;Name=XP_059739992.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1;protein_id=XP_059739992.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01898;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58447623	58447709	.	+	0	ID=Cattle_Y_C04316;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XP_059739992.1;Name=XP_059739992.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1;protein_id=XP_059739992.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01898;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58448150	58448306	.	+	0	ID=Cattle_Y_C04317;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XP_059739992.1;Name=XP_059739992.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1;protein_id=XP_059739992.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01898;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58451968	58452016	.	+	2	ID=Cattle_Y_C04318;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XP_059739992.1;Name=XP_059739992.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1;protein_id=XP_059739992.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01898;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58452625	58452714	.	+	1	ID=Cattle_Y_C04319;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XP_059739992.1;Name=XP_059739992.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1;protein_id=XP_059739992.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01898;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58453044	58453219	.	+	1	ID=Cattle_Y_C04320;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XP_059739992.1;Name=XP_059739992.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1;protein_id=XP_059739992.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01898;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58453958	58454076	.	+	2	ID=Cattle_Y_C04321;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XP_059739992.1;Name=XP_059739992.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1;protein_id=XP_059739992.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01898;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58454179	58454285	.	+	0	ID=Cattle_Y_C04322;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XP_059739992.1;Name=XP_059739992.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1;protein_id=XP_059739992.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01898;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58454958	58455108	.	+	1	ID=Cattle_Y_C04323;Parent=Cattle_Y_T01898;Dbxref=GeneID:132342097,GenBank:XP_059739992.1;Name=XP_059739992.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1;protein_id=XP_059739992.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01898;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	58414641	58455619	.	+	.	ID=Cattle_Y_T01899;Parent=Cattle_Y_G01092;Dbxref=GeneID:132342097,GenBank:XM_059884010.1;Name=XM_059884010.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;model_evidence=Supporting evidence includes similarity to: 13 ESTs%2C 3 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 66 samples with support for all annotated introns;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta%2C transcript variant X2;transcript_id=Cattle_Y_T01899;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884010.1
haplotype2-0000357	CAT	exon	58414641	58415763	.	+	.	ID=Cattle_Y_E04956;Parent=Cattle_Y_T01899;Dbxref=GeneID:132342097,GenBank:XM_059884010.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X2;transcript_id=Cattle_Y_T01899;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884010.1-1
haplotype2-0000357	CAT	exon	58430148	58430333	.	+	.	ID=Cattle_Y_E04957;Parent=Cattle_Y_T01899;Dbxref=GeneID:132342097,GenBank:XM_059884010.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X2;transcript_id=Cattle_Y_T01899;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884010.1-2
haplotype2-0000357	CAT	exon	58444846	58444949	.	+	.	ID=Cattle_Y_E04958;Parent=Cattle_Y_T01899;Dbxref=GeneID:132342097,GenBank:XM_059884010.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X2;transcript_id=Cattle_Y_T01899;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884010.1-3
haplotype2-0000357	CAT	exon	58445219	58445321	.	+	.	ID=Cattle_Y_E04959;Parent=Cattle_Y_T01899;Dbxref=GeneID:132342097,GenBank:XM_059884010.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X2;transcript_id=Cattle_Y_T01899;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884010.1-4
haplotype2-0000357	CAT	exon	58446263	58446337	.	+	.	ID=Cattle_Y_E04960;Parent=Cattle_Y_T01899;Dbxref=GeneID:132342097,GenBank:XM_059884010.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X2;transcript_id=Cattle_Y_T01899;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884010.1-5
haplotype2-0000357	CAT	exon	58447623	58447709	.	+	.	ID=Cattle_Y_E04961;Parent=Cattle_Y_T01899;Dbxref=GeneID:132342097,GenBank:XM_059884010.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X2;transcript_id=Cattle_Y_T01899;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884010.1-6
haplotype2-0000357	CAT	exon	58448150	58448306	.	+	.	ID=Cattle_Y_E04962;Parent=Cattle_Y_T01899;Dbxref=GeneID:132342097,GenBank:XM_059884010.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X2;transcript_id=Cattle_Y_T01899;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884010.1-7
haplotype2-0000357	CAT	exon	58451968	58452016	.	+	.	ID=Cattle_Y_E04963;Parent=Cattle_Y_T01899;Dbxref=GeneID:132342097,GenBank:XM_059884010.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X2;transcript_id=Cattle_Y_T01899;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884010.1-8
haplotype2-0000357	CAT	exon	58452625	58452714	.	+	.	ID=Cattle_Y_E04964;Parent=Cattle_Y_T01899;Dbxref=GeneID:132342097,GenBank:XM_059884010.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X2;transcript_id=Cattle_Y_T01899;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884010.1-9
haplotype2-0000357	CAT	exon	58453044	58453219	.	+	.	ID=Cattle_Y_E04965;Parent=Cattle_Y_T01899;Dbxref=GeneID:132342097,GenBank:XM_059884010.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X2;transcript_id=Cattle_Y_T01899;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884010.1-10
haplotype2-0000357	CAT	exon	58453958	58454076	.	+	.	ID=Cattle_Y_E04966;Parent=Cattle_Y_T01899;Dbxref=GeneID:132342097,GenBank:XM_059884010.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X2;transcript_id=Cattle_Y_T01899;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884010.1-11
haplotype2-0000357	CAT	exon	58454179	58454285	.	+	.	ID=Cattle_Y_E04967;Parent=Cattle_Y_T01899;Dbxref=GeneID:132342097,GenBank:XM_059884010.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X2;transcript_id=Cattle_Y_T01899;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884010.1-12
haplotype2-0000357	CAT	exon	58454958	58455619	.	+	.	ID=Cattle_Y_E04968;Parent=Cattle_Y_T01899;Dbxref=GeneID:132342097,GenBank:XM_059884010.1;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X2;transcript_id=Cattle_Y_T01899;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884010.1-13
haplotype2-0000357	CAT	CDS	58415434	58415763	.	+	0	ID=Cattle_Y_C04324;Parent=Cattle_Y_T01899;Dbxref=GeneID:132342097,GenBank:XP_059739993.1;Name=XP_059739993.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X2;protein_id=XP_059739993.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01899;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58430148	58430333	.	+	0	ID=Cattle_Y_C04325;Parent=Cattle_Y_T01899;Dbxref=GeneID:132342097,GenBank:XP_059739993.1;Name=XP_059739993.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X2;protein_id=XP_059739993.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01899;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58444846	58444949	.	+	0	ID=Cattle_Y_C04326;Parent=Cattle_Y_T01899;Dbxref=GeneID:132342097,GenBank:XP_059739993.1;Name=XP_059739993.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X2;protein_id=XP_059739993.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01899;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58445219	58445321	.	+	1	ID=Cattle_Y_C04327;Parent=Cattle_Y_T01899;Dbxref=GeneID:132342097,GenBank:XP_059739993.1;Name=XP_059739993.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X2;protein_id=XP_059739993.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01899;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58446263	58446337	.	+	0	ID=Cattle_Y_C04328;Parent=Cattle_Y_T01899;Dbxref=GeneID:132342097,GenBank:XP_059739993.1;Name=XP_059739993.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X2;protein_id=XP_059739993.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01899;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58447623	58447709	.	+	0	ID=Cattle_Y_C04329;Parent=Cattle_Y_T01899;Dbxref=GeneID:132342097,GenBank:XP_059739993.1;Name=XP_059739993.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X2;protein_id=XP_059739993.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01899;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58448150	58448306	.	+	0	ID=Cattle_Y_C04330;Parent=Cattle_Y_T01899;Dbxref=GeneID:132342097,GenBank:XP_059739993.1;Name=XP_059739993.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X2;protein_id=XP_059739993.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01899;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58451968	58452016	.	+	2	ID=Cattle_Y_C04331;Parent=Cattle_Y_T01899;Dbxref=GeneID:132342097,GenBank:XP_059739993.1;Name=XP_059739993.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X2;protein_id=XP_059739993.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01899;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58452625	58452714	.	+	1	ID=Cattle_Y_C04332;Parent=Cattle_Y_T01899;Dbxref=GeneID:132342097,GenBank:XP_059739993.1;Name=XP_059739993.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X2;protein_id=XP_059739993.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01899;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58453044	58453219	.	+	1	ID=Cattle_Y_C04333;Parent=Cattle_Y_T01899;Dbxref=GeneID:132342097,GenBank:XP_059739993.1;Name=XP_059739993.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X2;protein_id=XP_059739993.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01899;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58453958	58454076	.	+	2	ID=Cattle_Y_C04334;Parent=Cattle_Y_T01899;Dbxref=GeneID:132342097,GenBank:XP_059739993.1;Name=XP_059739993.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X2;protein_id=XP_059739993.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01899;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58454179	58454285	.	+	0	ID=Cattle_Y_C04335;Parent=Cattle_Y_T01899;Dbxref=GeneID:132342097,GenBank:XP_059739993.1;Name=XP_059739993.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X2;protein_id=XP_059739993.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01899;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58454958	58455108	.	+	1	ID=Cattle_Y_C04336;Parent=Cattle_Y_T01899;Dbxref=GeneID:132342097,GenBank:XP_059739993.1;Name=XP_059739993.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X2;protein_id=XP_059739993.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01899;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	58414641	58454289	.	+	.	ID=Cattle_Y_T01900;Parent=Cattle_Y_G01092;Dbxref=GeneID:132342097,GenBank:XM_059884011.1;Name=XM_059884011.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132342097;model_evidence=Supporting evidence includes similarity to: 5 ESTs%2C 2 Proteins%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 5 samples with support for all annotated introns;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta%2C transcript variant X3;transcript_id=Cattle_Y_T01900;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059884011.1
haplotype2-0000357	CAT	exon	58414641	58415763	.	+	.	ID=Cattle_Y_E04969;Parent=Cattle_Y_T01900;Dbxref=GeneID:132342097,GenBank:XM_059884011.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X3;transcript_id=Cattle_Y_T01900;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884011.1-1
haplotype2-0000357	CAT	exon	58416642	58416707	.	+	.	ID=Cattle_Y_E04970;Parent=Cattle_Y_T01900;Dbxref=GeneID:132342097,GenBank:XM_059884011.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X3;transcript_id=Cattle_Y_T01900;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884011.1-2
haplotype2-0000357	CAT	exon	58430148	58430333	.	+	.	ID=Cattle_Y_E04971;Parent=Cattle_Y_T01900;Dbxref=GeneID:132342097,GenBank:XM_059884011.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X3;transcript_id=Cattle_Y_T01900;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884011.1-3
haplotype2-0000357	CAT	exon	58444846	58444949	.	+	.	ID=Cattle_Y_E04972;Parent=Cattle_Y_T01900;Dbxref=GeneID:132342097,GenBank:XM_059884011.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X3;transcript_id=Cattle_Y_T01900;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884011.1-4
haplotype2-0000357	CAT	exon	58445219	58445321	.	+	.	ID=Cattle_Y_E04973;Parent=Cattle_Y_T01900;Dbxref=GeneID:132342097,GenBank:XM_059884011.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X3;transcript_id=Cattle_Y_T01900;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884011.1-5
haplotype2-0000357	CAT	exon	58446263	58446337	.	+	.	ID=Cattle_Y_E04974;Parent=Cattle_Y_T01900;Dbxref=GeneID:132342097,GenBank:XM_059884011.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X3;transcript_id=Cattle_Y_T01900;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884011.1-6
haplotype2-0000357	CAT	exon	58447623	58447709	.	+	.	ID=Cattle_Y_E04975;Parent=Cattle_Y_T01900;Dbxref=GeneID:132342097,GenBank:XM_059884011.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X3;transcript_id=Cattle_Y_T01900;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884011.1-7
haplotype2-0000357	CAT	exon	58448150	58448306	.	+	.	ID=Cattle_Y_E04976;Parent=Cattle_Y_T01900;Dbxref=GeneID:132342097,GenBank:XM_059884011.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X3;transcript_id=Cattle_Y_T01900;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884011.1-8
haplotype2-0000357	CAT	exon	58451968	58452016	.	+	.	ID=Cattle_Y_E04977;Parent=Cattle_Y_T01900;Dbxref=GeneID:132342097,GenBank:XM_059884011.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X3;transcript_id=Cattle_Y_T01900;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884011.1-9
haplotype2-0000357	CAT	exon	58452625	58452714	.	+	.	ID=Cattle_Y_E04978;Parent=Cattle_Y_T01900;Dbxref=GeneID:132342097,GenBank:XM_059884011.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X3;transcript_id=Cattle_Y_T01900;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884011.1-10
haplotype2-0000357	CAT	exon	58453044	58453219	.	+	.	ID=Cattle_Y_E04979;Parent=Cattle_Y_T01900;Dbxref=GeneID:132342097,GenBank:XM_059884011.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X3;transcript_id=Cattle_Y_T01900;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884011.1-11
haplotype2-0000357	CAT	exon	58453958	58454076	.	+	.	ID=Cattle_Y_E04980;Parent=Cattle_Y_T01900;Dbxref=GeneID:132342097,GenBank:XM_059884011.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X3;transcript_id=Cattle_Y_T01900;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884011.1-12
haplotype2-0000357	CAT	exon	58454179	58454289	.	+	.	ID=Cattle_Y_E04981;Parent=Cattle_Y_T01900;Dbxref=GeneID:132342097,GenBank:XM_059884011.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta, transcript variant X3;transcript_id=Cattle_Y_T01900;gene_id=Cattle_Y_G01092;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059884011.1-13
haplotype2-0000357	CAT	CDS	58415434	58415763	.	+	0	ID=Cattle_Y_C04337;Parent=Cattle_Y_T01900;Dbxref=GeneID:132342097,GenBank:XP_059739994.1;Name=XP_059739994.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X3;protein_id=XP_059739994.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01900;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58416642	58416707	.	+	0	ID=Cattle_Y_C04338;Parent=Cattle_Y_T01900;Dbxref=GeneID:132342097,GenBank:XP_059739994.1;Name=XP_059739994.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X3;protein_id=XP_059739994.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01900;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58430148	58430333	.	+	0	ID=Cattle_Y_C04339;Parent=Cattle_Y_T01900;Dbxref=GeneID:132342097,GenBank:XP_059739994.1;Name=XP_059739994.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X3;protein_id=XP_059739994.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01900;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58444846	58444949	.	+	0	ID=Cattle_Y_C04340;Parent=Cattle_Y_T01900;Dbxref=GeneID:132342097,GenBank:XP_059739994.1;Name=XP_059739994.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X3;protein_id=XP_059739994.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01900;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58445219	58445321	.	+	1	ID=Cattle_Y_C04341;Parent=Cattle_Y_T01900;Dbxref=GeneID:132342097,GenBank:XP_059739994.1;Name=XP_059739994.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X3;protein_id=XP_059739994.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01900;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58446263	58446337	.	+	0	ID=Cattle_Y_C04342;Parent=Cattle_Y_T01900;Dbxref=GeneID:132342097,GenBank:XP_059739994.1;Name=XP_059739994.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X3;protein_id=XP_059739994.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01900;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58447623	58447709	.	+	0	ID=Cattle_Y_C04343;Parent=Cattle_Y_T01900;Dbxref=GeneID:132342097,GenBank:XP_059739994.1;Name=XP_059739994.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X3;protein_id=XP_059739994.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01900;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58448150	58448306	.	+	0	ID=Cattle_Y_C04344;Parent=Cattle_Y_T01900;Dbxref=GeneID:132342097,GenBank:XP_059739994.1;Name=XP_059739994.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X3;protein_id=XP_059739994.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01900;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58451968	58452016	.	+	2	ID=Cattle_Y_C04345;Parent=Cattle_Y_T01900;Dbxref=GeneID:132342097,GenBank:XP_059739994.1;Name=XP_059739994.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X3;protein_id=XP_059739994.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01900;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58452625	58452714	.	+	1	ID=Cattle_Y_C04346;Parent=Cattle_Y_T01900;Dbxref=GeneID:132342097,GenBank:XP_059739994.1;Name=XP_059739994.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X3;protein_id=XP_059739994.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01900;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58453044	58453219	.	+	1	ID=Cattle_Y_C04347;Parent=Cattle_Y_T01900;Dbxref=GeneID:132342097,GenBank:XP_059739994.1;Name=XP_059739994.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X3;protein_id=XP_059739994.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01900;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58453958	58454076	.	+	2	ID=Cattle_Y_C04348;Parent=Cattle_Y_T01900;Dbxref=GeneID:132342097,GenBank:XP_059739994.1;Name=XP_059739994.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X3;protein_id=XP_059739994.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01900;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58454179	58454289	.	+	0	ID=Cattle_Y_C04349;Parent=Cattle_Y_T01900;Dbxref=GeneID:132342097,GenBank:XP_059739994.1;Name=XP_059739994.1;gbkey=CDS;gene=LOC132342097;product=serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X3;protein_id=XP_059739994.1;gene_id=Cattle_Y_G01092;transcript_id=Cattle_Y_T01900;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	58460239	58468788	.	+	.	ID=Cattle_Y_G01093;Dbxref=GeneID:100298830;Name=LOC100298830;description=putative GTP-binding protein 6;gbkey=Gene;gene=LOC100298830;gene_biotype=protein_coding;gene_id=Cattle_Y_G01093;source_id=gene-LOC100298830
haplotype2-0000357	CAT	mRNA	58460239	58468788	.	+	.	ID=Cattle_Y_T01901;Parent=Cattle_Y_G01093;Dbxref=GeneID:100298830,GenBank:XM_024995408.2;Name=XM_024995408.2;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100298830;model_evidence=Supporting evidence includes similarity to: 28 ESTs%2C 2 Proteins%2C 1 long SRA read%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 134 samples with support for all annotated introns;product=putative GTP-binding protein 6;transcript_id=Cattle_Y_T01901;gene_id=Cattle_Y_G01093;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_024995408.2
haplotype2-0000357	CAT	exon	58460239	58460627	.	+	.	ID=Cattle_Y_E04982;Parent=Cattle_Y_T01901;Dbxref=GeneID:100298830,GenBank:XM_024995408.2;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100298830;product=putative GTP-binding protein 6;transcript_id=Cattle_Y_T01901;gene_id=Cattle_Y_G01093;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024995408.2-1
haplotype2-0000357	CAT	exon	58462181	58462318	.	+	.	ID=Cattle_Y_E04983;Parent=Cattle_Y_T01901;Dbxref=GeneID:100298830,GenBank:XM_024995408.2;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100298830;product=putative GTP-binding protein 6;transcript_id=Cattle_Y_T01901;gene_id=Cattle_Y_G01093;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024995408.2-1
haplotype2-0000357	CAT	exon	58462724	58462794	.	+	.	ID=Cattle_Y_E04984;Parent=Cattle_Y_T01901;Dbxref=GeneID:100298830,GenBank:XM_024995408.2;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100298830;product=putative GTP-binding protein 6;transcript_id=Cattle_Y_T01901;gene_id=Cattle_Y_G01093;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024995408.2-1
haplotype2-0000357	CAT	exon	58462881	58463011	.	+	.	ID=Cattle_Y_E04985;Parent=Cattle_Y_T01901;Dbxref=GeneID:100298830,GenBank:XM_024995408.2;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100298830;product=putative GTP-binding protein 6;transcript_id=Cattle_Y_T01901;gene_id=Cattle_Y_G01093;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024995408.2-1
haplotype2-0000357	CAT	exon	58463521	58463591	.	+	.	ID=Cattle_Y_E04986;Parent=Cattle_Y_T01901;Dbxref=GeneID:100298830,GenBank:XM_024995408.2;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100298830;product=putative GTP-binding protein 6;transcript_id=Cattle_Y_T01901;gene_id=Cattle_Y_G01093;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024995408.2-1
haplotype2-0000357	CAT	exon	58464342	58464500	.	+	.	ID=Cattle_Y_E04987;Parent=Cattle_Y_T01901;Dbxref=GeneID:100298830,GenBank:XM_024995408.2;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100298830;product=putative GTP-binding protein 6;transcript_id=Cattle_Y_T01901;gene_id=Cattle_Y_G01093;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024995408.2-1
haplotype2-0000357	CAT	exon	58465386	58465594	.	+	.	ID=Cattle_Y_E04988;Parent=Cattle_Y_T01901;Dbxref=GeneID:100298830,GenBank:XM_024995408.2;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100298830;product=putative GTP-binding protein 6;transcript_id=Cattle_Y_T01901;gene_id=Cattle_Y_G01093;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024995408.2-1
haplotype2-0000357	CAT	exon	58466954	58467102	.	+	.	ID=Cattle_Y_E04989;Parent=Cattle_Y_T01901;Dbxref=GeneID:100298830,GenBank:XM_024995408.2;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100298830;product=putative GTP-binding protein 6;transcript_id=Cattle_Y_T01901;gene_id=Cattle_Y_G01093;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024995408.2-1
haplotype2-0000357	CAT	exon	58467346	58467498	.	+	.	ID=Cattle_Y_E04990;Parent=Cattle_Y_T01901;Dbxref=GeneID:100298830,GenBank:XM_024995408.2;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100298830;product=putative GTP-binding protein 6;transcript_id=Cattle_Y_T01901;gene_id=Cattle_Y_G01093;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024995408.2-1
haplotype2-0000357	CAT	exon	58468242	58468788	.	+	.	ID=Cattle_Y_E04991;Parent=Cattle_Y_T01901;Dbxref=GeneID:100298830,GenBank:XM_024995408.2;experiment=COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239];gbkey=mRNA;gene=LOC100298830;product=putative GTP-binding protein 6;transcript_id=Cattle_Y_T01901;gene_id=Cattle_Y_G01093;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_024995408.2-10
haplotype2-0000357	CAT	CDS	58460264	58460627	.	+	0	ID=Cattle_Y_C04350;Parent=Cattle_Y_T01901;gene_id=Cattle_Y_G01093;transcript_id=Cattle_Y_T01901;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58462181	58462318	.	+	2	ID=Cattle_Y_C04351;Parent=Cattle_Y_T01901;gene_id=Cattle_Y_G01093;transcript_id=Cattle_Y_T01901;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58462724	58462794	.	+	2	ID=Cattle_Y_C04352;Parent=Cattle_Y_T01901;gene_id=Cattle_Y_G01093;transcript_id=Cattle_Y_T01901;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58462881	58463011	.	+	0	ID=Cattle_Y_C04353;Parent=Cattle_Y_T01901;gene_id=Cattle_Y_G01093;transcript_id=Cattle_Y_T01901;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58463521	58463591	.	+	1	ID=Cattle_Y_C04354;Parent=Cattle_Y_T01901;gene_id=Cattle_Y_G01093;transcript_id=Cattle_Y_T01901;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58464342	58464500	.	+	2	ID=Cattle_Y_C04355;Parent=Cattle_Y_T01901;gene_id=Cattle_Y_G01093;transcript_id=Cattle_Y_T01901;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58465386	58465594	.	+	2	ID=Cattle_Y_C04356;Parent=Cattle_Y_T01901;gene_id=Cattle_Y_G01093;transcript_id=Cattle_Y_T01901;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58466954	58467102	.	+	0	ID=Cattle_Y_C04357;Parent=Cattle_Y_T01901;gene_id=Cattle_Y_G01093;transcript_id=Cattle_Y_T01901;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58467346	58467498	.	+	1	ID=Cattle_Y_C04358;Parent=Cattle_Y_T01901;gene_id=Cattle_Y_G01093;transcript_id=Cattle_Y_T01901;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58468242	58468365	.	+	1	ID=Cattle_Y_C04359;Parent=Cattle_Y_T01901;gene_id=Cattle_Y_G01093;transcript_id=Cattle_Y_T01901;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	gene	58472482	58488538	.	-	.	ID=Cattle_Y_G01094;Dbxref=GeneID:100125761;Name=PLCXD1;description=phosphatidylinositol-specific phospholipase C%2C X domain containing 1;gbkey=Gene;gene=PLCXD1;gene_biotype=protein_coding;gene_id=Cattle_Y_G01094;source_id=gene-PLCXD1
haplotype2-0000357	CAT	mRNA	58472482	58487354	.	-	.	ID=Cattle_Y_T01902;Parent=Cattle_Y_G01094;Dbxref=GeneID:100125761,GenBank:NM_001105044.2;Name=NM_001105044.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=PLCXD1;inference=similar to RNA sequence%2C mRNA (same species):RefSeq:NM_001105044.2;product=phosphatidylinositol-specific phospholipase C%2C X domain containing 1;transcript_id=Cattle_Y_T01902;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-NM_001105044.2
haplotype2-0000357	CAT	exon	58472482	58473122	.	-	.	ID=Cattle_Y_E04992;Parent=Cattle_Y_T01902;Dbxref=GeneID:100125761,GenBank:NM_001105044.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=PLCXD1;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001105044.2;product=phosphatidylinositol-specific phospholipase C, X domain containing 1;transcript_id=Cattle_Y_T01902;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001105044.2-7
haplotype2-0000357	CAT	exon	58474073	58474256	.	-	.	ID=Cattle_Y_E04993;Parent=Cattle_Y_T01902;Dbxref=GeneID:100125761,GenBank:NM_001105044.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=PLCXD1;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001105044.2;product=phosphatidylinositol-specific phospholipase C, X domain containing 1;transcript_id=Cattle_Y_T01902;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001105044.2-6
haplotype2-0000357	CAT	exon	58474965	58475120	.	-	.	ID=Cattle_Y_E04994;Parent=Cattle_Y_T01902;Dbxref=GeneID:100125761,GenBank:NM_001105044.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=PLCXD1;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001105044.2;product=phosphatidylinositol-specific phospholipase C, X domain containing 1;transcript_id=Cattle_Y_T01902;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001105044.2-5
haplotype2-0000357	CAT	exon	58476343	58476471	.	-	.	ID=Cattle_Y_E04995;Parent=Cattle_Y_T01902;Dbxref=GeneID:100125761,GenBank:NM_001105044.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=PLCXD1;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001105044.2;product=phosphatidylinositol-specific phospholipase C, X domain containing 1;transcript_id=Cattle_Y_T01902;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001105044.2-4
haplotype2-0000357	CAT	exon	58479082	58479218	.	-	.	ID=Cattle_Y_E04996;Parent=Cattle_Y_T01902;Dbxref=GeneID:100125761,GenBank:NM_001105044.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=PLCXD1;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001105044.2;product=phosphatidylinositol-specific phospholipase C, X domain containing 1;transcript_id=Cattle_Y_T01902;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001105044.2-3
haplotype2-0000357	CAT	exon	58481487	58481772	.	-	.	ID=Cattle_Y_E04997;Parent=Cattle_Y_T01902;Dbxref=GeneID:100125761,GenBank:NM_001105044.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=PLCXD1;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001105044.2;product=phosphatidylinositol-specific phospholipase C, X domain containing 1;transcript_id=Cattle_Y_T01902;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001105044.2-2
haplotype2-0000357	CAT	exon	58487194	58487354	.	-	.	ID=Cattle_Y_E04998;Parent=Cattle_Y_T01902;Dbxref=GeneID:100125761,GenBank:NM_001105044.2;Note=The RefSeq transcript has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=mRNA;gene=PLCXD1;inference=similar to RNA sequence, mRNA (same species):RefSeq:NM_001105044.2;product=phosphatidylinositol-specific phospholipase C, X domain containing 1;transcript_id=Cattle_Y_T01902;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-NM_001105044.2-1
haplotype2-0000357	CAT	CDS	58472884	58473122	.	-	2	ID=Cattle_Y_C04360;Parent=Cattle_Y_T01902;Dbxref=GeneID:100125761,GenBank:NP_001098514.1;Name=NP_001098514.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=PLCXD1;inference=similar to AA sequence (same species):RefSeq:NP_001098514.1;product=PI-PLC X domain-containing protein 1;protein_id=NP_001098514.1;gene_id=Cattle_Y_G01094;transcript_id=Cattle_Y_T01902;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58474073	58474256	.	-	0	ID=Cattle_Y_C04361;Parent=Cattle_Y_T01902;Dbxref=GeneID:100125761,GenBank:NP_001098514.1;Name=NP_001098514.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=PLCXD1;inference=similar to AA sequence (same species):RefSeq:NP_001098514.1;product=PI-PLC X domain-containing protein 1;protein_id=NP_001098514.1;gene_id=Cattle_Y_G01094;transcript_id=Cattle_Y_T01902;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58474965	58475120	.	-	0	ID=Cattle_Y_C04362;Parent=Cattle_Y_T01902;Dbxref=GeneID:100125761,GenBank:NP_001098514.1;Name=NP_001098514.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=PLCXD1;inference=similar to AA sequence (same species):RefSeq:NP_001098514.1;product=PI-PLC X domain-containing protein 1;protein_id=NP_001098514.1;gene_id=Cattle_Y_G01094;transcript_id=Cattle_Y_T01902;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58476343	58476471	.	-	0	ID=Cattle_Y_C04363;Parent=Cattle_Y_T01902;Dbxref=GeneID:100125761,GenBank:NP_001098514.1;Name=NP_001098514.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=PLCXD1;inference=similar to AA sequence (same species):RefSeq:NP_001098514.1;product=PI-PLC X domain-containing protein 1;protein_id=NP_001098514.1;gene_id=Cattle_Y_G01094;transcript_id=Cattle_Y_T01902;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58479082	58479218	.	-	2	ID=Cattle_Y_C04364;Parent=Cattle_Y_T01902;Dbxref=GeneID:100125761,GenBank:NP_001098514.1;Name=NP_001098514.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=PLCXD1;inference=similar to AA sequence (same species):RefSeq:NP_001098514.1;product=PI-PLC X domain-containing protein 1;protein_id=NP_001098514.1;gene_id=Cattle_Y_G01094;transcript_id=Cattle_Y_T01902;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58481487	58481616	.	-	0	ID=Cattle_Y_C04365;Parent=Cattle_Y_T01902;Dbxref=GeneID:100125761,GenBank:NP_001098514.1;Name=NP_001098514.1;Note=The RefSeq protein has 1 substitution compared to this genomic sequence;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=PLCXD1;inference=similar to AA sequence (same species):RefSeq:NP_001098514.1;product=PI-PLC X domain-containing protein 1;protein_id=NP_001098514.1;gene_id=Cattle_Y_G01094;transcript_id=Cattle_Y_T01902;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	58473559	58487298	.	-	.	ID=Cattle_Y_T01903;Parent=Cattle_Y_G01094;Dbxref=GeneID:100125761,GenBank:XM_059883962.1;Name=XM_059883962.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PLCXD1;model_evidence=Supporting evidence includes similarity to: 3 ESTs%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 6 samples with support for all annotated introns;product=phosphatidylinositol-specific phospholipase C%2C X domain containing 1%2C transcript variant X1;transcript_id=Cattle_Y_T01903;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883962.1
haplotype2-0000357	CAT	exon	58473559	58474256	.	-	.	ID=Cattle_Y_E04999;Parent=Cattle_Y_T01903;Dbxref=GeneID:100125761,GenBank:XM_059883962.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PLCXD1;product=phosphatidylinositol-specific phospholipase C, X domain containing 1, transcript variant X1;transcript_id=Cattle_Y_T01903;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883962.1-6
haplotype2-0000357	CAT	exon	58474965	58475120	.	-	.	ID=Cattle_Y_E05000;Parent=Cattle_Y_T01903;Dbxref=GeneID:100125761,GenBank:XM_059883962.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PLCXD1;product=phosphatidylinositol-specific phospholipase C, X domain containing 1, transcript variant X1;transcript_id=Cattle_Y_T01903;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883962.1-5
haplotype2-0000357	CAT	exon	58476343	58476471	.	-	.	ID=Cattle_Y_E05001;Parent=Cattle_Y_T01903;Dbxref=GeneID:100125761,GenBank:XM_059883962.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PLCXD1;product=phosphatidylinositol-specific phospholipase C, X domain containing 1, transcript variant X1;transcript_id=Cattle_Y_T01903;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883962.1-4
haplotype2-0000357	CAT	exon	58479082	58479218	.	-	.	ID=Cattle_Y_E05002;Parent=Cattle_Y_T01903;Dbxref=GeneID:100125761,GenBank:XM_059883962.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PLCXD1;product=phosphatidylinositol-specific phospholipase C, X domain containing 1, transcript variant X1;transcript_id=Cattle_Y_T01903;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883962.1-3
haplotype2-0000357	CAT	exon	58481487	58481772	.	-	.	ID=Cattle_Y_E05003;Parent=Cattle_Y_T01903;Dbxref=GeneID:100125761,GenBank:XM_059883962.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PLCXD1;product=phosphatidylinositol-specific phospholipase C, X domain containing 1, transcript variant X1;transcript_id=Cattle_Y_T01903;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883962.1-2
haplotype2-0000357	CAT	exon	58487194	58487298	.	-	.	ID=Cattle_Y_E05004;Parent=Cattle_Y_T01903;Dbxref=GeneID:100125761,GenBank:XM_059883962.1;experiment=COORDINATES: cap analysis [ECO:0007248];gbkey=mRNA;gene=PLCXD1;product=phosphatidylinositol-specific phospholipase C, X domain containing 1, transcript variant X1;transcript_id=Cattle_Y_T01903;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883962.1-1
haplotype2-0000357	CAT	CDS	58473756	58474256	.	-	0	ID=Cattle_Y_C04366;Parent=Cattle_Y_T01903;Dbxref=GeneID:100125761,GenBank:XP_059739945.1;Name=XP_059739945.1;gbkey=CDS;gene=PLCXD1;product=PI-PLC X domain-containing protein 1 isoform X1;protein_id=XP_059739945.1;gene_id=Cattle_Y_G01094;transcript_id=Cattle_Y_T01903;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58474965	58475120	.	-	0	ID=Cattle_Y_C04367;Parent=Cattle_Y_T01903;Dbxref=GeneID:100125761,GenBank:XP_059739945.1;Name=XP_059739945.1;gbkey=CDS;gene=PLCXD1;product=PI-PLC X domain-containing protein 1 isoform X1;protein_id=XP_059739945.1;gene_id=Cattle_Y_G01094;transcript_id=Cattle_Y_T01903;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58476343	58476471	.	-	0	ID=Cattle_Y_C04368;Parent=Cattle_Y_T01903;Dbxref=GeneID:100125761,GenBank:XP_059739945.1;Name=XP_059739945.1;gbkey=CDS;gene=PLCXD1;product=PI-PLC X domain-containing protein 1 isoform X1;protein_id=XP_059739945.1;gene_id=Cattle_Y_G01094;transcript_id=Cattle_Y_T01903;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58479082	58479218	.	-	2	ID=Cattle_Y_C04369;Parent=Cattle_Y_T01903;Dbxref=GeneID:100125761,GenBank:XP_059739945.1;Name=XP_059739945.1;gbkey=CDS;gene=PLCXD1;product=PI-PLC X domain-containing protein 1 isoform X1;protein_id=XP_059739945.1;gene_id=Cattle_Y_G01094;transcript_id=Cattle_Y_T01903;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58481487	58481616	.	-	0	ID=Cattle_Y_C04370;Parent=Cattle_Y_T01903;Dbxref=GeneID:100125761,GenBank:XP_059739945.1;Name=XP_059739945.1;gbkey=CDS;gene=PLCXD1;product=PI-PLC X domain-containing protein 1 isoform X1;protein_id=XP_059739945.1;gene_id=Cattle_Y_G01094;transcript_id=Cattle_Y_T01903;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	58473559	58486316	.	-	.	ID=Cattle_Y_T01904;Parent=Cattle_Y_G01094;Dbxref=GeneID:100125761,GenBank:XM_059883963.1;Name=XM_059883963.1;gbkey=mRNA;gene=PLCXD1;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 5 samples with support for all annotated introns;product=phosphatidylinositol-specific phospholipase C%2C X domain containing 1%2C transcript variant X2;transcript_id=Cattle_Y_T01904;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883963.1
haplotype2-0000357	CAT	exon	58473559	58474256	.	-	.	ID=Cattle_Y_E05005;Parent=Cattle_Y_T01904;Dbxref=GeneID:100125761,GenBank:XM_059883963.1;gbkey=mRNA;gene=PLCXD1;product=phosphatidylinositol-specific phospholipase C, X domain containing 1, transcript variant X2;transcript_id=Cattle_Y_T01904;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883963.1-6
haplotype2-0000357	CAT	exon	58474965	58475120	.	-	.	ID=Cattle_Y_E05006;Parent=Cattle_Y_T01904;Dbxref=GeneID:100125761,GenBank:XM_059883963.1;gbkey=mRNA;gene=PLCXD1;product=phosphatidylinositol-specific phospholipase C, X domain containing 1, transcript variant X2;transcript_id=Cattle_Y_T01904;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883963.1-5
haplotype2-0000357	CAT	exon	58476343	58476471	.	-	.	ID=Cattle_Y_E05007;Parent=Cattle_Y_T01904;Dbxref=GeneID:100125761,GenBank:XM_059883963.1;gbkey=mRNA;gene=PLCXD1;product=phosphatidylinositol-specific phospholipase C, X domain containing 1, transcript variant X2;transcript_id=Cattle_Y_T01904;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883963.1-4
haplotype2-0000357	CAT	exon	58479082	58479218	.	-	.	ID=Cattle_Y_E05008;Parent=Cattle_Y_T01904;Dbxref=GeneID:100125761,GenBank:XM_059883963.1;gbkey=mRNA;gene=PLCXD1;product=phosphatidylinositol-specific phospholipase C, X domain containing 1, transcript variant X2;transcript_id=Cattle_Y_T01904;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883963.1-3
haplotype2-0000357	CAT	exon	58481487	58481772	.	-	.	ID=Cattle_Y_E05009;Parent=Cattle_Y_T01904;Dbxref=GeneID:100125761,GenBank:XM_059883963.1;gbkey=mRNA;gene=PLCXD1;product=phosphatidylinositol-specific phospholipase C, X domain containing 1, transcript variant X2;transcript_id=Cattle_Y_T01904;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883963.1-2
haplotype2-0000357	CAT	exon	58485960	58486316	.	-	.	ID=Cattle_Y_E05010;Parent=Cattle_Y_T01904;Dbxref=GeneID:100125761,GenBank:XM_059883963.1;gbkey=mRNA;gene=PLCXD1;product=phosphatidylinositol-specific phospholipase C, X domain containing 1, transcript variant X2;transcript_id=Cattle_Y_T01904;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883963.1-1
haplotype2-0000357	CAT	CDS	58473756	58474256	.	-	0	ID=Cattle_Y_C04371;Parent=Cattle_Y_T01904;Dbxref=GeneID:100125761,GenBank:XP_059739946.1;Name=XP_059739946.1;gbkey=CDS;gene=PLCXD1;product=PI-PLC X domain-containing protein 1 isoform X1;protein_id=XP_059739946.1;gene_id=Cattle_Y_G01094;transcript_id=Cattle_Y_T01904;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58474965	58475120	.	-	0	ID=Cattle_Y_C04372;Parent=Cattle_Y_T01904;Dbxref=GeneID:100125761,GenBank:XP_059739946.1;Name=XP_059739946.1;gbkey=CDS;gene=PLCXD1;product=PI-PLC X domain-containing protein 1 isoform X1;protein_id=XP_059739946.1;gene_id=Cattle_Y_G01094;transcript_id=Cattle_Y_T01904;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58476343	58476471	.	-	0	ID=Cattle_Y_C04373;Parent=Cattle_Y_T01904;Dbxref=GeneID:100125761,GenBank:XP_059739946.1;Name=XP_059739946.1;gbkey=CDS;gene=PLCXD1;product=PI-PLC X domain-containing protein 1 isoform X1;protein_id=XP_059739946.1;gene_id=Cattle_Y_G01094;transcript_id=Cattle_Y_T01904;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58479082	58479218	.	-	2	ID=Cattle_Y_C04374;Parent=Cattle_Y_T01904;Dbxref=GeneID:100125761,GenBank:XP_059739946.1;Name=XP_059739946.1;gbkey=CDS;gene=PLCXD1;product=PI-PLC X domain-containing protein 1 isoform X1;protein_id=XP_059739946.1;gene_id=Cattle_Y_G01094;transcript_id=Cattle_Y_T01904;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58481487	58481616	.	-	0	ID=Cattle_Y_C04375;Parent=Cattle_Y_T01904;Dbxref=GeneID:100125761,GenBank:XP_059739946.1;Name=XP_059739946.1;gbkey=CDS;gene=PLCXD1;product=PI-PLC X domain-containing protein 1 isoform X1;protein_id=XP_059739946.1;gene_id=Cattle_Y_G01094;transcript_id=Cattle_Y_T01904;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	mRNA	58473559	58488538	.	-	.	ID=Cattle_Y_T01905;Parent=Cattle_Y_G01094;Dbxref=GeneID:100125761,GenBank:XM_059883964.1;Name=XM_059883964.1;gbkey=mRNA;gene=PLCXD1;model_evidence=Supporting evidence includes similarity to: 1 EST%2C and 100%25 coverage of the annotated genomic feature by RNAseq alignments%2C including 2 samples with support for all annotated introns;product=phosphatidylinositol-specific phospholipase C%2C X domain containing 1%2C transcript variant X3;transcript_id=Cattle_Y_T01905;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=rna-XM_059883964.1
haplotype2-0000357	CAT	exon	58473559	58474256	.	-	.	ID=Cattle_Y_E05011;Parent=Cattle_Y_T01905;Dbxref=GeneID:100125761,GenBank:XM_059883964.1;gbkey=mRNA;gene=PLCXD1;product=phosphatidylinositol-specific phospholipase C, X domain containing 1, transcript variant X3;transcript_id=Cattle_Y_T01905;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883964.1-6
haplotype2-0000357	CAT	exon	58474965	58475120	.	-	.	ID=Cattle_Y_E05012;Parent=Cattle_Y_T01905;Dbxref=GeneID:100125761,GenBank:XM_059883964.1;gbkey=mRNA;gene=PLCXD1;product=phosphatidylinositol-specific phospholipase C, X domain containing 1, transcript variant X3;transcript_id=Cattle_Y_T01905;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883964.1-5
haplotype2-0000357	CAT	exon	58476343	58476471	.	-	.	ID=Cattle_Y_E05013;Parent=Cattle_Y_T01905;Dbxref=GeneID:100125761,GenBank:XM_059883964.1;gbkey=mRNA;gene=PLCXD1;product=phosphatidylinositol-specific phospholipase C, X domain containing 1, transcript variant X3;transcript_id=Cattle_Y_T01905;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883964.1-4
haplotype2-0000357	CAT	exon	58479082	58479218	.	-	.	ID=Cattle_Y_E05014;Parent=Cattle_Y_T01905;Dbxref=GeneID:100125761,GenBank:XM_059883964.1;gbkey=mRNA;gene=PLCXD1;product=phosphatidylinositol-specific phospholipase C, X domain containing 1, transcript variant X3;transcript_id=Cattle_Y_T01905;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883964.1-3
haplotype2-0000357	CAT	exon	58481487	58481772	.	-	.	ID=Cattle_Y_E05015;Parent=Cattle_Y_T01905;Dbxref=GeneID:100125761,GenBank:XM_059883964.1;gbkey=mRNA;gene=PLCXD1;product=phosphatidylinositol-specific phospholipase C, X domain containing 1, transcript variant X3;transcript_id=Cattle_Y_T01905;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883964.1-2
haplotype2-0000357	CAT	exon	58488452	58488538	.	-	.	ID=Cattle_Y_E05016;Parent=Cattle_Y_T01905;Dbxref=GeneID:100125761,GenBank:XM_059883964.1;gbkey=mRNA;gene=PLCXD1;product=phosphatidylinositol-specific phospholipase C, X domain containing 1, transcript variant X3;transcript_id=Cattle_Y_T01905;gene_id=Cattle_Y_G01094;gene_biotype=protein_coding;transcript_biotype=protein_coding;source_id=exon-XM_059883964.1-1
haplotype2-0000357	CAT	CDS	58473756	58474256	.	-	0	ID=Cattle_Y_C04376;Parent=Cattle_Y_T01905;Dbxref=GeneID:100125761,GenBank:XP_059739947.1;Name=XP_059739947.1;gbkey=CDS;gene=PLCXD1;product=PI-PLC X domain-containing protein 1 isoform X1;protein_id=XP_059739947.1;gene_id=Cattle_Y_G01094;transcript_id=Cattle_Y_T01905;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58474965	58475120	.	-	0	ID=Cattle_Y_C04377;Parent=Cattle_Y_T01905;Dbxref=GeneID:100125761,GenBank:XP_059739947.1;Name=XP_059739947.1;gbkey=CDS;gene=PLCXD1;product=PI-PLC X domain-containing protein 1 isoform X1;protein_id=XP_059739947.1;gene_id=Cattle_Y_G01094;transcript_id=Cattle_Y_T01905;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58476343	58476471	.	-	0	ID=Cattle_Y_C04378;Parent=Cattle_Y_T01905;Dbxref=GeneID:100125761,GenBank:XP_059739947.1;Name=XP_059739947.1;gbkey=CDS;gene=PLCXD1;product=PI-PLC X domain-containing protein 1 isoform X1;protein_id=XP_059739947.1;gene_id=Cattle_Y_G01094;transcript_id=Cattle_Y_T01905;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58479082	58479218	.	-	2	ID=Cattle_Y_C04379;Parent=Cattle_Y_T01905;Dbxref=GeneID:100125761,GenBank:XP_059739947.1;Name=XP_059739947.1;gbkey=CDS;gene=PLCXD1;product=PI-PLC X domain-containing protein 1 isoform X1;protein_id=XP_059739947.1;gene_id=Cattle_Y_G01094;transcript_id=Cattle_Y_T01905;gene_biotype=protein_coding;transcript_biotype=protein_coding
haplotype2-0000357	CAT	CDS	58481487	58481616	.	-	0	ID=Cattle_Y_C04380;Parent=Cattle_Y_T01905;Dbxref=GeneID:100125761,GenBank:XP_059739947.1;Name=XP_059739947.1;gbkey=CDS;gene=PLCXD1;product=PI-PLC X domain-containing protein 1 isoform X1;protein_id=XP_059739947.1;gene_id=Cattle_Y_G01094;transcript_id=Cattle_Y_T01905;gene_biotype=protein_coding;transcript_biotype=protein_coding