Description

Dimhap track, S3S4 chromosome-specific dimer haplotypes

Methods

500 random S3S4 dimers were extracted from each chromosome, aligned and converted to HMMs which were used to annotate the assembly.

Hits with score to length ratio less then 0.7 and with length less then 300 bp were removed from annotation.

Contact

Contact Fedor Ryabov <fedorrik1@gmail.com>

Contact Ivan A. Alexandrov <ivanalx@hotmail.com>

Credits

Fedor Ryabov (HSE University, Moscow, Russia)

Lev I. Uralsky (1. Sirius University of Science and Technology, Sochi, Russia; 2. Vavilov Institute of General Genetics, Moscow, Russia)

Valery A. Shepelev (Institute of Molecular Genetics, Moscow, Russia (currently retired))

Ivan A. Alexandrov (Tel Aviv University, Israel)