include filtered_transmap.txt
include evaluation.txt
include consensus.txt
include transmap.txt


track hubCentral
compositeTrack on
shortLabel Cactus
longLabel Cactus Alignment Tracks
group cat_tracks
subGroup1 view Track_Type Snake=Alignments
subGroup2 orgs Organisms GCF_029281585.1=GCF_029281585.1 GCF_028858775.1=GCF_028858775.1 GCF_029289425.1=GCF_029289425.1 hg38=hg38 GCF_028885655.1=GCF_028885655.1 GCF_028885625.1=GCF_028885625.1 GCF_028878055.1=GCF_028878055.1 hs1=hs1
dragAndDrop subTracks
dimensions dimensionX=view dimensionY=orgs
noInherit on
priority 0
centerLabelsDense on
visibility full
type bigBed 3

    track hubCentralAlignments
    shortLabel Alignments
    view Alignments
    visibility full
    subTrack hubCentral

        track snakeGCF_029281585.1
        longLabel GCF_029281585.1
        shortLabel GCF_029281585.1
        otherSpecies GCF_029281585.1
        visibility hide
        parent hubCentralAlignments off
        priority 3
        bigDataUrl ../8-t2t-apes-2023v1.hal
        type halSnake
        group snake
        subGroups view=Snake orgs=GCF_029281585.1

        track snakeGCF_028858775.1
        longLabel GCF_028858775.1
        shortLabel GCF_028858775.1
        otherSpecies GCF_028858775.1
        visibility hide
        parent hubCentralAlignments off
        priority 3
        bigDataUrl ../8-t2t-apes-2023v1.hal
        type halSnake
        group snake
        subGroups view=Snake orgs=GCF_028858775.1

        track snakeGCF_029289425.1
        longLabel GCF_029289425.1
        shortLabel GCF_029289425.1
        otherSpecies GCF_029289425.1
        visibility hide
        parent hubCentralAlignments off
        priority 3
        bigDataUrl ../8-t2t-apes-2023v1.hal
        type halSnake
        group snake
        subGroups view=Snake orgs=GCF_029289425.1

        track snakehg38
        longLabel hg38
        shortLabel hg38
        otherSpecies hg38
        visibility hide
        parent hubCentralAlignments off
        priority 3
        bigDataUrl ../8-t2t-apes-2023v1.hal
        type halSnake
        group snake
        subGroups view=Snake orgs=hg38

        track snakeGCF_028885655.1
        longLabel GCF_028885655.1
        shortLabel GCF_028885655.1
        otherSpecies GCF_028885655.1
        visibility hide
        parent hubCentralAlignments off
        priority 3
        bigDataUrl ../8-t2t-apes-2023v1.hal
        type halSnake
        group snake
        subGroups view=Snake orgs=GCF_028885655.1

        track snakeGCF_028885625.1
        longLabel GCF_028885625.1
        shortLabel GCF_028885625.1
        otherSpecies GCF_028885625.1
        visibility hide
        parent hubCentralAlignments off
        priority 3
        bigDataUrl ../8-t2t-apes-2023v1.hal
        type halSnake
        group snake
        subGroups view=Snake orgs=GCF_028885625.1

        track snakeGCF_028878055.1
        longLabel GCF_028878055.1
        shortLabel GCF_028878055.1
        otherSpecies GCF_028878055.1
        visibility hide
        parent hubCentralAlignments off
        priority 3
        bigDataUrl ../8-t2t-apes-2023v1.hal
        type halSnake
        group snake
        subGroups view=Snake orgs=GCF_028878055.1

        track snakehs1
        longLabel hs1
        shortLabel hs1
        otherSpecies hs1
        visibility full
        parent hubCentralAlignments off
        priority 3
        bigDataUrl ../8-t2t-apes-2023v1.hal
        type halSnake
        group snake
        subGroups view=Snake orgs=hs1