RAxML-NG v. 0.9.0 released on 20.05.2019 by The Exelixis Lab.
Developed by: Alexey M. Kozlov and Alexandros Stamatakis.
Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth.
Latest version: https://github.com/amkozlov/raxml-ng
Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml

RAxML-NG was called at 17-Oct-2023 14:50:39 as follows:

raxml-ng --all --threads 4 --msa TSPY_siamang.aligned.fasta --model GTR+I+G --tree pars{10} --bs-trees 1000

Analysis options:
  run mode: ML tree search + bootstrapping (Felsenstein Bootstrap)
  start tree(s): parsimony (10)
  bootstrap replicates: 1000
  random seed: 1697579439
  tip-inner: OFF
  pattern compression: ON
  per-rate scalers: OFF
  site repeats: ON
  branch lengths: proportional (ML estimate, algorithm: NR-FAST)
  SIMD kernels: SSE3
  parallelization: PTHREADS (4 threads), thread pinning: OFF


ERROR: Alignment file not found: TSPY_siamang.aligned.fasta