vg view

Images made using vg view | dot.

Only the reference path is shown for now.

chr2-206494-207494

chr2-206494-207494 GIAB >200bp INS in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

Skipping large file: hpp60-hg38.cactus.minigraph-softmasked-hg38-overlapfix.hg38_chr2-206494-207494_c50.dot.svg (2.54 Mbytes)

chr2-604208-605208

chr2-604208-605208 GIAB >200bp INS in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-848699-849699

chr2-848699-849699 GIAB >200bp INS in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-487674-488410

chr2-487674-488410 GIAB >200bp DEL in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-494901-495541

chr2-494901-495541 GIAB >200bp DEL in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-1012285-1013762

chr2-1012285-1013762 GIAB >200bp DEL in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-665122-666122

chr2-665122-666122 GIAB <100bp INS in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-914603-915603

chr2-914603-915603 GIAB <100bp INS in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-1828750-1829750

chr2-1828750-1829750 GIAB <100bp INS in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-740626-741089

chr2-740626-741089 GIAB <100bp DEL in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-890251-890735

chr2-890251-890735 GIAB <100bp DEL in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-1005606-1006056

chr2-1005606-1006056 GIAB <100bp DEL in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-1150749-1151749

chr2-1150749-1151749 GIAB <100bp INS not in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-2519598-2520598

chr2-2519598-2520598 GIAB <100bp INS not in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-25014003-25015003

chr2-25014003-25015003 GIAB <100bp INS not in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-1822565-1823023

chr2-1822565-1823023 GIAB <100bp DEL not in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-11288454-11288929

chr2-11288454-11288929 GIAB <100bp DEL not in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-11784089-11784549

chr2-11784089-11784549 GIAB <100bp DEL not in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-1198666-1199666

chr2-1198666-1199666 GIAB >200bp INS not in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-1467442-1468442

chr2-1467442-1468442 GIAB >200bp INS not in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-2794800-2795670

chr2-2794800-2795670 GIAB >200bp DEL not in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-4164887-4176088

chr2-4164887-4176088 GIAB >200bp DEL not in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-4733493-4739958

chr2-4733493-4739958 GIAB >200bp DEL not in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-174719826-174720851

chr2-174719826-174720851 small SD (0.993 sim)

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-30642656-30643705

chr2-30642656-30643705 small SD (0.995 sim)

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-113565786-113566863

chr2-113565786-113566863 small SD (0.993 sim)

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-47815167-47816168

chr2-47815167-47816168 small SD (0.905 sim)

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-70803231-70804235

chr2-70803231-70804235 small SD (0.9 sim)

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-110967775-110968780

chr2-110967775-110968780 small SD (0.91 sim)

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-113679824-113680988

chr2-113679824-113680988 VNTR <200bp (Chaisson Lab)

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-121776446-121777641

chr2-121776446-121777641 VNTR <200bp (Chaisson Lab)

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-36689986-36691127

chr2-36689986-36691127 VNTR <200bp (Chaisson Lab)

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-1361072-1363592

chr2-1361072-1363592 VNTR >1kbp (Chaisson Lab)

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-43875884-43878028

chr2-43875884-43878028 VNTR >1kbp (Chaisson Lab)

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-227202245-227204295

chr2-227202245-227204295 VNTR >1kbp (Chaisson Lab)

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

Skipping large file: hpp60-hg38.cactus.minigraph-softmasked-hg38-overlapfix.hg38_chr2-227202245-227204295_c50.dot.svg (1.2 Mbytes)

odgi viz

Images made using odgi viz.

chr2-206494-207494

chr2-206494-207494 GIAB >200bp INS in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-604208-605208

chr2-604208-605208 GIAB >200bp INS in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-848699-849699

chr2-848699-849699 GIAB >200bp INS in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-487674-488410

chr2-487674-488410 GIAB >200bp DEL in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-494901-495541

chr2-494901-495541 GIAB >200bp DEL in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-1012285-1013762

chr2-1012285-1013762 GIAB >200bp DEL in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-665122-666122

chr2-665122-666122 GIAB <100bp INS in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-914603-915603

chr2-914603-915603 GIAB <100bp INS in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-1828750-1829750

chr2-1828750-1829750 GIAB <100bp INS in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-740626-741089

chr2-740626-741089 GIAB <100bp DEL in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-890251-890735

chr2-890251-890735 GIAB <100bp DEL in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-1005606-1006056

chr2-1005606-1006056 GIAB <100bp DEL in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-1150749-1151749

chr2-1150749-1151749 GIAB <100bp INS not in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-2519598-2520598

chr2-2519598-2520598 GIAB <100bp INS not in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-25014003-25015003

chr2-25014003-25015003 GIAB <100bp INS not in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-1822565-1823023

chr2-1822565-1823023 GIAB <100bp DEL not in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-11288454-11288929

chr2-11288454-11288929 GIAB <100bp DEL not in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-11784089-11784549

chr2-11784089-11784549 GIAB <100bp DEL not in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-1198666-1199666

chr2-1198666-1199666 GIAB >200bp INS not in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-1467442-1468442

chr2-1467442-1468442 GIAB >200bp INS not in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-2794800-2795670

chr2-2794800-2795670 GIAB >200bp DEL not in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-4164887-4176088

chr2-4164887-4176088 GIAB >200bp DEL not in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-4733493-4739958

chr2-4733493-4739958 GIAB >200bp DEL not in TR

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-174719826-174720851

chr2-174719826-174720851 small SD (0.993 sim)

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-30642656-30643705

chr2-30642656-30643705 small SD (0.995 sim)

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-113565786-113566863

chr2-113565786-113566863 small SD (0.993 sim)

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-47815167-47816168

chr2-47815167-47816168 small SD (0.905 sim)

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-70803231-70804235

chr2-70803231-70804235 small SD (0.9 sim)

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-110967775-110968780

chr2-110967775-110968780 small SD (0.91 sim)

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-113679824-113680988

chr2-113679824-113680988 VNTR <200bp (Chaisson Lab)

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-121776446-121777641

chr2-121776446-121777641 VNTR <200bp (Chaisson Lab)

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-36689986-36691127

chr2-36689986-36691127 VNTR <200bp (Chaisson Lab)

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-1361072-1363592

chr2-1361072-1363592 VNTR >1kbp (Chaisson Lab)

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-43875884-43878028

chr2-43875884-43878028 VNTR >1kbp (Chaisson Lab)

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38

chr2-227202245-227204295

chr2-227202245-227204295 VNTR >1kbp (Chaisson Lab)

Cactus Hub: cactus.star-single-copy-fatanc-og-july-7

Cactus Hub: cactus.minimap2_star-all-to-ref-fatanc-no-secondary-july-8

minigraph.L50-l50k.hg38

cactus.minigraph-softmasked-hg38-overlapfix.hg38