H9 hESC T2T Genome Assembly

The diploid reference genome of a human embryonic stem cell Pačara, Ungaro et al. (2026)

UCSC Browser hub links

• Open UCSC Browser hub on T2T H9 haplotype 1
• Open UCSC Browser hub on T2T H9 haplotype 2
• Open UCSC Browser hub on T2T CHM13
• Open UCSC Browser hub on GRCh38/hg38

Genenome annotations files

1. t2t_h9_v01_hap1 CAT genes V2
2. t2t_h9_v01_hap2 CAT genes V2