contig	len	genome	aln	ident	1:1-aln	1:1-ident	aln-bp	ident-bp	1:1-aln-bp	1:1-ident-bp
_Total_	3205286264	GCA_028858775.2	0.9043	0.9864	0.8087	0.9867	2898387943	2858992849	2592084194	2557663471
_Total_	3205286264	GCA_028878055.2	0.8326	0.9602	0.7485	0.9611	2668651732	2562540732	2399307179	2306085820
_Total_	3205286264	GCA_028885625.2	0.8735	0.9663	0.7825	0.9668	2799875000	2705413709	2508145710	2424763962
_Total_	3205286264	GCA_028885655.2	0.8737	0.9663	0.7827	0.9668	2800377064	2705932868	2508699107	2425315015
_Total_	3205286264	GCA_029281585.2	0.8986	0.9829	0.8024	0.9832	2880170832	2830836952	2571890808	2528648238
_Total_	3205286264	GCA_029289425.2	0.9043	0.9864	0.8074	0.9867	2898483694	2859071946	2587903302	2553558696
_Total_	3205286264	hg38	0.9392	1.0000	0.8405	1.0000	3010296759	3010296759	2694058483	2694058483
_Total_	3205286264	hs1	0.9295	0.9986	0.8330	0.9987	2979396266	2975137577	2670072296	2666493935
hg38.chr1	248956422	GCA_028858775.2	0.8918	0.9876	0.8274	0.9876	222015936	219269376	205987182	203441507
hg38.chr1	248956422	GCA_028878055.2	0.8232	0.9619	0.7647	0.9622	204945366	197139492	190370833	183184302
hg38.chr1	248956422	GCA_028885625.2	0.8668	0.9677	0.8081	0.9678	215783853	208820521	201182522	194703053
hg38.chr1	248956422	GCA_028885655.2	0.8672	0.9677	0.8090	0.9678	215899900	208935846	201398167	194913572
hg38.chr1	248956422	GCA_029281585.2	0.8857	0.9840	0.8196	0.9840	220498495	216961198	204034180	200761784
hg38.chr1	248956422	GCA_029289425.2	0.8915	0.9876	0.8261	0.9876	221950319	219205457	205658217	203116280
hg38.chr1	248956422	hg38	0.9172	1.0000	0.8575	1.0000	228350286	228350286	213468318	213468318
hg38.chr1	248956422	hs1	0.9106	0.9988	0.8503	0.9988	226709075	226441207	211677292	211430035
hg38.chr10	133797422	GCA_028858775.2	0.9596	0.9860	0.9018	0.9858	128386627	126583429	120659896	118952104
hg38.chr10	133797422	GCA_028878055.2	0.8977	0.9601	0.8402	0.9604	120109393	115313053	112413856	107960331
hg38.chr10	133797422	GCA_028885625.2	0.9307	0.9656	0.8677	0.9655	124520320	120233942	116096977	112095445
hg38.chr10	133797422	GCA_028885655.2	0.9311	0.9656	0.8686	0.9655	124585117	120301561	116222114	112216367
hg38.chr10	133797422	GCA_029281585.2	0.9558	0.9826	0.8966	0.9825	127885896	125657367	119958166	117857632
hg38.chr10	133797422	GCA_029289425.2	0.9587	0.9860	0.8988	0.9860	128269818	126473622	120259012	118569609
hg38.chr10	133797422	hg38	0.9945	1.0000	0.9407	1.0000	133057847	133057847	125863903	125863903
hg38.chr10	133797422	hs1	0.9880	0.9982	0.9329	0.9982	132196569	131960798	124820761	124591227
hg38.chr10_GL383545v1_alt	179254	GCA_028858775.2	0.8329	0.9813	0.0520	0.9809	149298	146511	9318	9140
hg38.chr10_GL383545v1_alt	179254	GCA_028878055.2	0.4827	0.9471	0.0000	0.0000	86517	81938	0	0
hg38.chr10_GL383545v1_alt	179254	GCA_028885625.2	0.7909	0.9638	0.0224	0.9646	141765	136630	4008	3866
hg38.chr10_GL383545v1_alt	179254	GCA_028885655.2	0.7909	0.9639	0.0224	0.9658	141766	136647	4010	3873
hg38.chr10_GL383545v1_alt	179254	GCA_029281585.2	0.8278	0.9796	0.0519	0.9757	148390	145360	9303	9077
hg38.chr10_GL383545v1_alt	179254	GCA_029289425.2	0.8197	0.9810	0.0519	0.9817	146938	144152	9303	9133
hg38.chr10_GL383545v1_alt	179254	hg38	1.0000	1.0000	0.0790	1.0000	179254	179254	14154	14154
hg38.chr10_GL383545v1_alt	179254	hs1	0.8039	0.9888	0.0000	0.0000	144103	142495	0	0
hg38.chr10_GL383546v1_alt	309802	GCA_028858775.2	0.9510	0.9836	0.0218	0.9809	294623	289781	6763	6634
hg38.chr10_GL383546v1_alt	309802	GCA_028878055.2	0.6760	0.9549	0.0000	0.0000	209414	199973	0	0
hg38.chr10_GL383546v1_alt	309802	GCA_028885625.2	0.9245	0.9665	0.0217	0.9592	286400	276797	6715	6441
hg38.chr10_GL383546v1_alt	309802	GCA_028885655.2	0.9208	0.9665	0.0217	0.9582	285257	275687	6716	6435
hg38.chr10_GL383546v1_alt	309802	GCA_029281585.2	0.8472	0.9831	0.0000	0.0000	262472	258033	0	0
hg38.chr10_GL383546v1_alt	309802	GCA_029289425.2	0.9356	0.9834	0.0218	0.9829	289848	285048	6765	6649
hg38.chr10_GL383546v1_alt	309802	hg38	1.0000	1.0000	0.0288	1.0000	309802	309802	8914	8914
hg38.chr10_GL383546v1_alt	309802	hs1	0.9645	0.9968	0.0000	0.0000	298808	297865	0	0
hg38.chr10_KI270824v1_alt	181496	GCA_028858775.2	0.8126	0.9864	0.0001	1.0000	147476	145474	15	15
hg38.chr10_KI270824v1_alt	181496	GCA_028878055.2	0.3301	0.9533	0.0000	0.0000	59914	57115	0	0
hg38.chr10_KI270824v1_alt	181496	GCA_028885625.2	0.3655	0.9552	0.0000	0.0000	66338	63366	0	0
hg38.chr10_KI270824v1_alt	181496	GCA_028885655.2	0.3655	0.9557	0.0000	0.0000	66336	63395	0	0
hg38.chr10_KI270824v1_alt	181496	GCA_029281585.2	0.5735	0.9738	0.0000	0.0000	104092	101364	0	0
hg38.chr10_KI270824v1_alt	181496	GCA_029289425.2	0.8121	0.9865	0.0001	1.0000	147398	145409	15	15
hg38.chr10_KI270824v1_alt	181496	hg38	1.0000	1.0000	0.0001	1.0000	181496	181496	16	16
hg38.chr10_KI270824v1_alt	181496	hs1	0.9897	0.9997	0.0001	1.0000	179632	179575	16	16
hg38.chr10_KI270825v1_alt	188315	GCA_028858775.2	0.8995	0.9906	0.0000	0.0000	169384	167785	0	0
hg38.chr10_KI270825v1_alt	188315	GCA_028878055.2	0.8869	0.9622	0.0000	0.0000	167014	160703	0	0
hg38.chr10_KI270825v1_alt	188315	GCA_028885625.2	0.8941	0.9705	0.0000	0.0000	168378	163410	0	0
hg38.chr10_KI270825v1_alt	188315	GCA_028885655.2	0.8942	0.9705	0.0000	0.0000	168383	163416	0	0
hg38.chr10_KI270825v1_alt	188315	GCA_029281585.2	0.8974	0.9851	0.0000	0.0000	169003	166477	0	0
hg38.chr10_KI270825v1_alt	188315	GCA_029289425.2	0.8995	0.9903	0.0000	0.0000	169388	167751	0	0
hg38.chr10_KI270825v1_alt	188315	hg38	0.9533	1.0000	0.0000	0.0000	179521	179521	0	0
hg38.chr10_KI270825v1_alt	188315	hs1	0.9020	0.9989	0.0000	0.0000	169856	169674	0	0
hg38.chr11	135086622	GCA_028858775.2	0.9488	0.9865	0.8913	0.9867	128164220	126434417	120396590	118801187
hg38.chr11	135086622	GCA_028878055.2	0.8729	0.9606	0.8196	0.9612	117921553	113274171	110717304	106417865
hg38.chr11	135086622	GCA_028885625.2	0.9029	0.9665	0.8456	0.9669	121973515	117892590	114224388	110444440
hg38.chr11	135086622	GCA_028885655.2	0.9026	0.9666	0.8446	0.9669	121927739	117849467	114093185	110319648
hg38.chr11	135086622	GCA_029281585.2	0.9424	0.9828	0.8827	0.9830	127307862	125115704	119246867	117221102
hg38.chr11	135086622	GCA_029289425.2	0.9476	0.9865	0.8892	0.9868	128009760	126281519	120120080	118530804
hg38.chr11	135086622	hg38	0.9818	1.0000	0.9273	1.0000	132627664	132627664	125266694	125266694
hg38.chr11	135086622	hs1	0.9757	0.9986	0.9205	0.9986	131800090	131614279	124350770	124174668
hg38.chr11_GL383547v1_alt	154407	GCA_028858775.2	0.9247	0.9799	0.0378	0.9775	142776	139908	5830	5699
hg38.chr11_GL383547v1_alt	154407	GCA_028878055.2	0.8697	0.9540	0.0374	0.9497	134292	128109	5771	5481
hg38.chr11_GL383547v1_alt	154407	GCA_028885625.2	0.9476	0.9608	0.0378	0.9647	146318	140583	5829	5623
hg38.chr11_GL383547v1_alt	154407	GCA_028885655.2	0.9479	0.9607	0.0378	0.9642	146359	140604	5830	5621
hg38.chr11_GL383547v1_alt	154407	GCA_029281585.2	0.9966	0.9782	0.0378	0.9781	153884	150535	5841	5713
hg38.chr11_GL383547v1_alt	154407	GCA_029289425.2	0.8051	0.9792	0.0000	0.0000	124312	121732	0	0
hg38.chr11_GL383547v1_alt	154407	hg38	1.0000	1.0000	0.0380	1.0000	154407	154407	5862	5862
hg38.chr11_GL383547v1_alt	154407	hs1	0.9990	0.9983	0.0380	1.0000	154259	153990	5862	5862
hg38.chr11_JH159136v1_alt	200998	GCA_028858775.2	0.9626	0.9834	0.0104	0.9771	193472	190265	2092	2044
hg38.chr11_JH159136v1_alt	200998	GCA_028878055.2	0.8005	0.9554	0.0103	0.9547	160895	153725	2073	1979
hg38.chr11_JH159136v1_alt	200998	GCA_028885625.2	0.0190	0.8907	0.0000	0.0000	3824	3406	0	0
hg38.chr11_JH159136v1_alt	200998	GCA_028885655.2	0.0190	0.8894	0.0000	0.0000	3824	3401	0	0
hg38.chr11_JH159136v1_alt	200998	GCA_029281585.2	0.9650	0.9776	0.0104	0.9808	193965	189615	2085	2045
hg38.chr11_JH159136v1_alt	200998	GCA_029289425.2	0.9476	0.9841	0.0104	0.9761	190465	187437	2092	2042
hg38.chr11_JH159136v1_alt	200998	hg38	1.0000	1.0000	0.0347	1.0000	200998	200998	6974	6974
hg38.chr11_JH159136v1_alt	200998	hs1	0.9596	0.9989	0.0000	0.0000	192875	192669	0	0
hg38.chr11_JH159137v1_alt	191409	GCA_028858775.2	0.9924	0.9864	0.0002	0.9574	189952	187365	47	45
hg38.chr11_JH159137v1_alt	191409	GCA_028878055.2	0.9298	0.9567	0.0000	0.0000	177981	170277	0	0
hg38.chr11_JH159137v1_alt	191409	GCA_028885625.2	0.9001	0.9562	0.0002	0.7647	172282	164730	34	26
hg38.chr11_JH159137v1_alt	191409	GCA_028885655.2	0.6104	0.9601	0.0000	0.0000	116840	112174	0	0
hg38.chr11_JH159137v1_alt	191409	GCA_029281585.2	0.9743	0.9795	0.0002	0.8511	186487	182658	47	40
hg38.chr11_JH159137v1_alt	191409	GCA_029289425.2	0.9451	0.9862	0.0002	0.9574	180902	178400	47	45
hg38.chr11_JH159137v1_alt	191409	hg38	1.0000	1.0000	0.0031	1.0000	191409	191409	596	596
hg38.chr11_JH159137v1_alt	191409	hs1	0.9988	0.9988	0.0031	1.0000	191181	190945	596	596
hg38.chr11_KI270721v1_random	100316	GCA_028858775.2	0.9576	0.9817	0.0000	0.0000	96059	94304	0	0
hg38.chr11_KI270721v1_random	100316	GCA_028878055.2	0.9528	0.9496	0.0000	0.0000	95580	90767	0	0
hg38.chr11_KI270721v1_random	100316	GCA_028885625.2	0.9485	0.9544	0.0000	0.0000	95152	90810	0	0
hg38.chr11_KI270721v1_random	100316	GCA_028885655.2	0.9483	0.9546	0.0000	0.0000	95127	90804	0	0
hg38.chr11_KI270721v1_random	100316	GCA_029281585.2	0.9762	0.9731	0.0000	0.0000	97928	95294	0	0
hg38.chr11_KI270721v1_random	100316	GCA_029289425.2	0.9767	0.9818	0.0000	0.0000	97980	96201	0	0
hg38.chr11_KI270721v1_random	100316	hg38	1.0000	1.0000	0.0000	0.0000	100316	100316	0	0
hg38.chr11_KI270721v1_random	100316	hs1	0.9812	0.9941	0.0000	0.0000	98431	97855	0	0
hg38.chr11_KI270826v1_alt	186169	GCA_028858775.2	0.7766	0.9823	0.0000	0.0000	144578	142017	0	0
hg38.chr11_KI270826v1_alt	186169	GCA_028878055.2	0.7365	0.9467	0.0000	0.0000	137105	129795	0	0
hg38.chr11_KI270826v1_alt	186169	GCA_028885625.2	0.8511	0.9533	0.0000	0.0000	158456	151057	0	0
hg38.chr11_KI270826v1_alt	186169	GCA_028885655.2	0.8300	0.9532	0.0000	0.0000	154520	147282	0	0
hg38.chr11_KI270826v1_alt	186169	GCA_029281585.2	0.9483	0.9757	0.0000	0.0000	176537	172242	0	0
hg38.chr11_KI270826v1_alt	186169	GCA_029289425.2	0.7745	0.9823	0.0000	0.0000	144186	141640	0	0
hg38.chr11_KI270826v1_alt	186169	hg38	1.0000	1.0000	0.0000	0.0000	186169	186169	0	0
hg38.chr11_KI270826v1_alt	186169	hs1	0.9947	0.9973	0.0000	0.0000	185182	184685	0	0
hg38.chr11_KI270827v1_alt	67707	GCA_028858775.2	0.9945	0.9881	0.0107	0.9945	67336	66535	723	719
hg38.chr11_KI270827v1_alt	67707	GCA_028878055.2	0.9540	0.9533	0.0106	0.9556	64594	61577	721	689
hg38.chr11_KI270827v1_alt	67707	GCA_028885625.2	0.9575	0.9590	0.0107	0.9574	64832	62175	727	696
hg38.chr11_KI270827v1_alt	67707	GCA_028885655.2	0.9586	0.9592	0.0107	0.9560	64903	62253	727	695
hg38.chr11_KI270827v1_alt	67707	GCA_029281585.2	0.9927	0.9810	0.0107	0.9752	67215	65940	727	709
hg38.chr11_KI270827v1_alt	67707	GCA_029289425.2	0.9934	0.9882	0.0107	0.9931	67261	66466	722	717
hg38.chr11_KI270827v1_alt	67707	hg38	1.0000	1.0000	0.0108	1.0000	67707	67707	731	731
hg38.chr11_KI270827v1_alt	67707	hs1	0.9997	0.9990	0.0108	0.9986	67688	67622	731	730
hg38.chr11_KI270829v1_alt	204059	GCA_028858775.2	0.7965	0.9839	0.2034	0.9799	162535	159912	41501	40666
hg38.chr11_KI270829v1_alt	204059	GCA_028878055.2	0.6050	0.9582	0.1230	0.9571	123446	118285	25092	24015
hg38.chr11_KI270829v1_alt	204059	GCA_028885625.2	0.7367	0.9619	0.1988	0.9611	150328	144604	40568	38990
hg38.chr11_KI270829v1_alt	204059	GCA_028885655.2	0.7369	0.9619	0.1989	0.9606	150367	144636	40583	38986
hg38.chr11_KI270829v1_alt	204059	GCA_029281585.2	0.8267	0.9808	0.2023	0.9758	168687	165451	41280	40279
hg38.chr11_KI270829v1_alt	204059	GCA_029289425.2	0.7960	0.9836	0.2034	0.9797	162425	159767	41503	40660
hg38.chr11_KI270829v1_alt	204059	hg38	0.8782	1.0000	0.2485	1.0000	179211	179211	50699	50699
hg38.chr11_KI270829v1_alt	204059	hs1	0.8338	0.9969	0.2043	0.9916	170153	169624	41692	41342
hg38.chr11_KI270830v1_alt	177092	GCA_028858775.2	0.9610	0.9817	0.0260	0.9870	170178	167072	4603	4543
hg38.chr11_KI270830v1_alt	177092	GCA_028878055.2	0.9273	0.9470	0.0318	0.9647	164226	155515	5637	5438
hg38.chr11_KI270830v1_alt	177092	GCA_028885625.2	0.9657	0.9553	0.0319	0.9694	171012	163369	5650	5477
hg38.chr11_KI270830v1_alt	177092	GCA_028885655.2	0.9667	0.9554	0.0319	0.9713	171188	163558	5650	5488
hg38.chr11_KI270830v1_alt	177092	GCA_029281585.2	0.9609	0.9740	0.0319	0.9834	170169	165745	5658	5564
hg38.chr11_KI270830v1_alt	177092	GCA_029289425.2	0.9685	0.9818	0.0309	0.9867	171508	168381	5480	5407
hg38.chr11_KI270830v1_alt	177092	hg38	1.0000	1.0000	0.0323	1.0000	177092	177092	5717	5717
hg38.chr11_KI270830v1_alt	177092	hs1	0.9961	0.9979	0.0323	0.9991	176404	176034	5717	5712
hg38.chr11_KI270831v1_alt	296895	GCA_028858775.2	0.9888	0.9863	0.0000	0.0000	293555	289533	0	0
hg38.chr11_KI270831v1_alt	296895	GCA_028878055.2	0.9443	0.9573	0.0000	0.0000	280355	268383	0	0
hg38.chr11_KI270831v1_alt	296895	GCA_028885625.2	0.9732	0.9617	0.0000	0.0000	288951	277897	0	0
hg38.chr11_KI270831v1_alt	296895	GCA_028885655.2	0.9730	0.9616	0.0000	0.0000	288879	277787	0	0
hg38.chr11_KI270831v1_alt	296895	GCA_029281585.2	0.9881	0.9791	0.0000	0.0000	293361	287229	0	0
hg38.chr11_KI270831v1_alt	296895	GCA_029289425.2	0.9890	0.9856	0.0000	0.0000	293626	289403	0	0
hg38.chr11_KI270831v1_alt	296895	hg38	0.9999	1.0000	0.0000	0.0000	296864	296864	0	0
hg38.chr11_KI270831v1_alt	296895	hs1	0.9947	0.9974	0.0000	0.0000	295322	294549	0	0
hg38.chr11_KI270832v1_alt	210133	GCA_028858775.2	0.9659	0.9802	0.0054	0.9352	202965	198942	1126	1053
hg38.chr11_KI270832v1_alt	210133	GCA_028878055.2	0.8886	0.9440	0.0000	0.0000	186721	176260	0	0
hg38.chr11_KI270832v1_alt	210133	GCA_028885625.2	0.9141	0.9518	0.0029	0.8336	192074	182815	607	506
hg38.chr11_KI270832v1_alt	210133	GCA_028885655.2	0.9009	0.9513	0.0011	0.8400	189316	180104	225	189
hg38.chr11_KI270832v1_alt	210133	GCA_029281585.2	0.9293	0.9732	0.0001	0.8636	195267	190042	22	19
hg38.chr11_KI270832v1_alt	210133	GCA_029289425.2	0.9526	0.9804	0.0026	0.9380	200181	196253	548	514
hg38.chr11_KI270832v1_alt	210133	hg38	1.0000	1.0000	0.0068	1.0000	210133	210133	1426	1426
hg38.chr11_KI270832v1_alt	210133	hs1	0.9949	0.9973	0.0068	0.9418	209069	208512	1426	1343
hg38.chr11_KI270902v1_alt	106711	GCA_028858775.2	0.9311	0.9720	0.0038	0.7631	99360	96582	401	306
hg38.chr11_KI270902v1_alt	106711	GCA_028878055.2	0.9047	0.9444	0.0067	0.9115	96542	91178	712	649
hg38.chr11_KI270902v1_alt	106711	GCA_028885625.2	0.9109	0.9510	0.0067	0.9185	97207	92441	712	654
hg38.chr11_KI270902v1_alt	106711	GCA_028885655.2	0.9105	0.9510	0.0067	0.9185	97156	92395	712	654
hg38.chr11_KI270902v1_alt	106711	GCA_029281585.2	0.9361	0.9666	0.0067	0.8834	99887	96550	712	629
hg38.chr11_KI270902v1_alt	106711	GCA_029289425.2	0.9590	0.9689	0.0055	0.7901	102333	99151	586	463
hg38.chr11_KI270902v1_alt	106711	hg38	1.0000	1.0000	0.0076	1.0000	106711	106711	811	811
hg38.chr11_KI270902v1_alt	106711	hs1	0.9848	0.9966	0.0076	0.9975	105092	104731	811	809
hg38.chr11_KI270903v1_alt	214625	GCA_028858775.2	0.9779	0.9814	0.0004	0.7722	209878	205979	79	61
hg38.chr11_KI270903v1_alt	214625	GCA_028878055.2	0.9295	0.9465	0.0000	0.0000	199491	188828	0	0
hg38.chr11_KI270903v1_alt	214625	GCA_028885625.2	0.9682	0.9539	0.0003	0.9167	207791	198210	72	66
hg38.chr11_KI270903v1_alt	214625	GCA_028885655.2	0.9683	0.9540	0.0003	0.9167	207830	198277	72	66
hg38.chr11_KI270903v1_alt	214625	GCA_029281585.2	0.9577	0.9741	0.0004	0.7561	205553	200233	82	62
hg38.chr11_KI270903v1_alt	214625	GCA_029289425.2	0.9798	0.9815	0.0004	0.7722	210292	206404	79	61
hg38.chr11_KI270903v1_alt	214625	hg38	1.0000	1.0000	0.0009	1.0000	214625	214625	193	193
hg38.chr11_KI270903v1_alt	214625	hs1	0.9973	0.9981	0.0007	1.0000	214048	213652	158	158
hg38.chr11_KI270927v1_alt	218612	GCA_028858775.2	0.9293	0.9757	0.0066	0.9649	203164	198225	1453	1402
hg38.chr11_KI270927v1_alt	218612	GCA_028878055.2	0.8971	0.9462	0.0027	0.8851	196119	185574	583	516
hg38.chr11_KI270927v1_alt	218612	GCA_028885625.2	0.8957	0.9528	0.0027	0.9658	195803	186559	585	565
hg38.chr11_KI270927v1_alt	218612	GCA_028885655.2	0.9018	0.9528	0.0023	0.9636	197138	187828	494	476
hg38.chr11_KI270927v1_alt	218612	GCA_029281585.2	0.9300	0.9716	0.0032	0.9518	203300	197523	705	671
hg38.chr11_KI270927v1_alt	218612	GCA_029289425.2	0.9271	0.9748	0.0039	0.9662	202682	197575	858	829
hg38.chr11_KI270927v1_alt	218612	hg38	1.0000	1.0000	0.0207	1.0000	218612	218612	4521	4521
hg38.chr11_KI270927v1_alt	218612	hs1	0.9820	0.9972	0.0178	0.9869	214684	214084	3892	3841
hg38.chr12	133275309	GCA_028858775.2	0.9607	0.9869	0.9241	0.9869	128042723	126359434	123153540	121537880
hg38.chr12	133275309	GCA_028878055.2	0.8883	0.9611	0.8509	0.9617	118391785	113788625	113401773	109061694
hg38.chr12	133275309	GCA_028885625.2	0.9315	0.9669	0.8953	0.9671	124152532	120037833	119324689	115397271
hg38.chr12	133275309	GCA_028885655.2	0.9314	0.9669	0.8949	0.9671	124127360	120014486	119270400	115345853
hg38.chr12	133275309	GCA_029281585.2	0.9552	0.9834	0.9195	0.9835	127310933	125191420	122548315	120527723
hg38.chr12	133275309	GCA_029289425.2	0.9593	0.9868	0.9213	0.9869	127844628	126157060	122780544	121171460
hg38.chr12	133275309	hg38	0.9943	1.0000	0.9622	1.0000	132512432	132512432	128231376	128231376
hg38.chr12	133275309	hs1	0.9779	0.9987	0.9451	0.9987	130332828	130160472	125954637	125792441
hg38.chr12_GL383549v1_alt	120804	GCA_028858775.2	0.9468	0.9868	0.0000	0.0000	114380	112874	0	0
hg38.chr12_GL383549v1_alt	120804	GCA_028878055.2	0.8893	0.9664	0.0000	0.0000	107431	103817	0	0
hg38.chr12_GL383549v1_alt	120804	GCA_028885625.2	0.8926	0.9712	0.0000	0.0000	107825	104719	0	0
hg38.chr12_GL383549v1_alt	120804	GCA_028885655.2	0.8924	0.9710	0.0000	0.0000	107808	104683	0	0
hg38.chr12_GL383549v1_alt	120804	GCA_029281585.2	0.9465	0.9840	0.0000	0.0000	114341	112517	0	0
hg38.chr12_GL383549v1_alt	120804	GCA_029289425.2	0.9460	0.9872	0.0000	0.0000	114278	112815	0	0
hg38.chr12_GL383549v1_alt	120804	hg38	1.0000	1.0000	0.0000	0.0000	120804	120804	0	0
hg38.chr12_GL383549v1_alt	120804	hs1	0.9492	0.9991	0.0000	0.0000	114665	114566	0	0
hg38.chr12_GL383550v2_alt	169178	GCA_028858775.2	0.9957	0.9883	0.0448	0.9859	168458	166480	7582	7475
hg38.chr12_GL383550v2_alt	169178	GCA_028878055.2	0.8312	0.9620	0.0448	0.9546	140623	135276	7574	7230
hg38.chr12_GL383550v2_alt	169178	GCA_028885625.2	0.9487	0.9696	0.0448	0.9663	160500	155628	7571	7316
hg38.chr12_GL383550v2_alt	169178	GCA_028885655.2	0.9489	0.9697	0.0448	0.9655	160536	155669	7571	7310
hg38.chr12_GL383550v2_alt	169178	GCA_029281585.2	0.9925	0.9828	0.0449	0.9843	167906	165021	7588	7469
hg38.chr12_GL383550v2_alt	169178	GCA_029289425.2	0.9808	0.9880	0.0448	0.9852	165931	163933	7585	7473
hg38.chr12_GL383550v2_alt	169178	hg38	1.0000	1.0000	0.0450	1.0000	169178	169178	7619	7619
hg38.chr12_GL383550v2_alt	169178	hs1	0.9994	0.9985	0.0450	1.0000	169082	168826	7619	7619
hg38.chr12_GL383551v1_alt	184319	GCA_028858775.2	0.8665	0.9809	0.0000	0.0000	159704	156652	0	0
hg38.chr12_GL383551v1_alt	184319	GCA_028878055.2	0.8812	0.9550	0.0000	0.0000	162418	155109	0	0
hg38.chr12_GL383551v1_alt	184319	GCA_028885625.2	0.8799	0.9582	0.0000	0.0000	162189	155408	0	0
hg38.chr12_GL383551v1_alt	184319	GCA_028885655.2	0.8796	0.9581	0.0000	0.0000	162120	155328	0	0
hg38.chr12_GL383551v1_alt	184319	GCA_029281585.2	0.8951	0.9788	0.0000	0.0000	164979	161479	0	0
hg38.chr12_GL383551v1_alt	184319	GCA_029289425.2	0.8661	0.9810	0.0000	0.0000	159647	156607	0	0
hg38.chr12_GL383551v1_alt	184319	hg38	1.0000	1.0000	0.0000	0.0000	184317	184317	0	0
hg38.chr12_GL383551v1_alt	184319	hs1	0.9325	0.9958	0.0000	0.0000	171884	171162	0	0
hg38.chr12_GL383552v1_alt	138655	GCA_028858775.2	0.9932	0.9865	0.3159	0.9858	137712	135851	43797	43175
hg38.chr12_GL383552v1_alt	138655	GCA_028878055.2	0.9618	0.9638	0.3117	0.9635	133358	128532	43213	41634
hg38.chr12_GL383552v1_alt	138655	GCA_028885625.2	0.9622	0.9680	0.3127	0.9687	133419	129151	43361	42002
hg38.chr12_GL383552v1_alt	138655	GCA_028885655.2	0.9623	0.9682	0.3122	0.9686	133421	129176	43289	41931
hg38.chr12_GL383552v1_alt	138655	GCA_029281585.2	0.9923	0.9839	0.3157	0.9844	137593	135380	43775	43094
hg38.chr12_GL383552v1_alt	138655	GCA_029289425.2	0.9931	0.9868	0.3159	0.9862	137703	135884	43797	43193
hg38.chr12_GL383552v1_alt	138655	hg38	1.0000	1.0000	0.3184	1.0000	138655	138655	44148	44148
hg38.chr12_GL383552v1_alt	138655	hs1	0.9947	0.9990	0.3183	0.9998	137926	137792	44131	44121
hg38.chr12_GL383553v2_alt	152874	GCA_028858775.2	0.9538	0.9852	0.0000	0.0000	145815	143661	0	0
hg38.chr12_GL383553v2_alt	152874	GCA_028878055.2	0.8196	0.9618	0.0000	0.0000	125294	120503	0	0
hg38.chr12_GL383553v2_alt	152874	GCA_028885625.2	0.8895	0.9672	0.0000	0.0000	135987	131521	0	0
hg38.chr12_GL383553v2_alt	152874	GCA_028885655.2	0.8895	0.9670	0.0000	0.0000	135982	131490	0	0
hg38.chr12_GL383553v2_alt	152874	GCA_029281585.2	0.9959	0.9825	0.0000	0.0000	152248	149591	0	0
hg38.chr12_GL383553v2_alt	152874	GCA_029289425.2	0.9961	0.9848	0.0000	0.0000	152285	149965	0	0
hg38.chr12_GL383553v2_alt	152874	hg38	1.0000	1.0000	0.0000	0.0000	152874	152874	0	0
hg38.chr12_GL383553v2_alt	152874	hs1	0.9995	0.9983	0.0000	0.0000	152802	152539	0	0
hg38.chr12_GL877875v1_alt	167313	GCA_028858775.2	0.9244	0.9837	0.0192	0.9791	154665	152149	3208	3141
hg38.chr12_GL877875v1_alt	167313	GCA_028878055.2	0.8136	0.9507	0.0177	0.9548	136120	129414	2962	2828
hg38.chr12_GL877875v1_alt	167313	GCA_028885625.2	0.8757	0.9595	0.0177	0.9586	146508	140568	2968	2845
hg38.chr12_GL877875v1_alt	167313	GCA_028885655.2	0.8758	0.9595	0.0177	0.9589	146531	140602	2968	2846
hg38.chr12_GL877875v1_alt	167313	GCA_029281585.2	0.9543	0.9820	0.0000	0.0000	159666	156794	0	0
hg38.chr12_GL877875v1_alt	167313	GCA_029289425.2	0.9219	0.9836	0.0192	0.9791	154248	151722	3209	3142
hg38.chr12_GL877875v1_alt	167313	hg38	1.0000	1.0000	0.0363	1.0000	167313	167313	6068	6068
hg38.chr12_GL877875v1_alt	167313	hs1	0.9448	0.9974	0.0000	0.0000	158079	157665	0	0
hg38.chr12_GL877876v1_alt	408271	GCA_028858775.2	0.9762	0.9879	0.0000	0.0000	398565	393735	0	0
hg38.chr12_GL877876v1_alt	408271	GCA_028878055.2	0.5092	0.9245	0.0000	0.0000	207894	192207	0	0
hg38.chr12_GL877876v1_alt	408271	GCA_028885625.2	0.9194	0.9674	0.0000	0.0000	375375	363120	0	0
hg38.chr12_GL877876v1_alt	408271	GCA_028885655.2	0.8856	0.9675	0.0000	0.0000	361571	349812	0	0
hg38.chr12_GL877876v1_alt	408271	GCA_029281585.2	0.9575	0.9836	0.0000	0.0000	390901	384480	0	0
hg38.chr12_GL877876v1_alt	408271	GCA_029289425.2	0.9742	0.9849	0.0000	0.0000	397731	391717	0	0
hg38.chr12_GL877876v1_alt	408271	hg38	1.0000	1.0000	0.0000	0.0000	408271	408271	0	0
hg38.chr12_GL877876v1_alt	408271	hs1	0.9792	0.9944	0.0000	0.0000	399780	397523	0	0
hg38.chr12_KI270833v1_alt	76061	GCA_028858775.2	0.9173	0.9824	0.0000	0.0000	69772	68547	0	0
hg38.chr12_KI270833v1_alt	76061	GCA_028878055.2	0.8863	0.9517	0.0000	0.0000	67412	64155	0	0
hg38.chr12_KI270833v1_alt	76061	GCA_028885625.2	0.8968	0.9605	0.0000	0.0000	68209	65514	0	0
hg38.chr12_KI270833v1_alt	76061	GCA_028885655.2	0.8917	0.9599	0.0000	0.0000	67824	65105	0	0
hg38.chr12_KI270833v1_alt	76061	GCA_029281585.2	0.8941	0.9809	0.0000	0.0000	68005	66703	0	0
hg38.chr12_KI270833v1_alt	76061	GCA_029289425.2	0.9125	0.9834	0.0000	0.0000	69404	68250	0	0
hg38.chr12_KI270833v1_alt	76061	hg38	1.0000	1.0000	0.0000	0.0000	76061	76061	0	0
hg38.chr12_KI270833v1_alt	76061	hs1	0.9281	0.9968	0.0000	0.0000	70596	70372	0	0
hg38.chr12_KI270834v1_alt	119498	GCA_028858775.2	0.9859	0.9870	0.0012	0.9597	117809	116276	149	143
hg38.chr12_KI270834v1_alt	119498	GCA_028878055.2	0.9730	0.9573	0.0000	0.0000	116275	111308	0	0
hg38.chr12_KI270834v1_alt	119498	GCA_028885625.2	0.9788	0.9616	0.0000	0.0000	116965	112469	0	0
hg38.chr12_KI270834v1_alt	119498	GCA_028885655.2	0.9786	0.9617	0.0000	0.0000	116938	112456	0	0
hg38.chr12_KI270834v1_alt	119498	GCA_029281585.2	0.9853	0.9828	0.0000	0.0000	117741	115710	0	0
hg38.chr12_KI270834v1_alt	119498	GCA_029289425.2	0.9867	0.9869	0.0012	0.9530	117908	116363	149	142
hg38.chr12_KI270834v1_alt	119498	hg38	1.0000	1.0000	0.0049	1.0000	119498	119498	583	583
hg38.chr12_KI270834v1_alt	119498	hs1	0.9966	0.9997	0.0049	0.9931	119096	119055	583	579
hg38.chr12_KI270835v1_alt	238139	GCA_028858775.2	0.9797	0.9863	0.0093	0.8165	233296	230091	2207	1802
hg38.chr12_KI270835v1_alt	238139	GCA_028878055.2	0.8407	0.9593	0.0000	0.0000	200205	192055	0	0
hg38.chr12_KI270835v1_alt	238139	GCA_028885625.2	0.8878	0.9656	0.0000	0.0000	211431	204153	0	0
hg38.chr12_KI270835v1_alt	238139	GCA_028885655.2	0.9224	0.9659	0.0000	0.0000	219668	212176	0	0
hg38.chr12_KI270835v1_alt	238139	GCA_029281585.2	0.9715	0.9838	0.0018	0.8523	231343	227605	440	375
hg38.chr12_KI270835v1_alt	238139	GCA_029289425.2	0.9750	0.9863	0.0093	0.8179	232180	229003	2207	1805
hg38.chr12_KI270835v1_alt	238139	hg38	1.0000	1.0000	0.0125	1.0000	238139	238139	2987	2987
hg38.chr12_KI270835v1_alt	238139	hs1	0.9987	0.9993	0.0125	0.9822	237835	237675	2974	2921
hg38.chr12_KI270836v1_alt	56134	GCA_028858775.2	0.7753	0.9639	0.0180	0.8492	43522	41952	1008	856
hg38.chr12_KI270836v1_alt	56134	GCA_028878055.2	0.4621	0.9258	0.0020	0.9292	25937	24012	113	105
hg38.chr12_KI270836v1_alt	56134	GCA_028885625.2	0.6792	0.9520	0.0031	0.8966	38129	36300	174	156
hg38.chr12_KI270836v1_alt	56134	GCA_028885655.2	0.6807	0.9521	0.0048	0.9151	38212	36382	271	248
hg38.chr12_KI270836v1_alt	56134	GCA_029281585.2	0.6985	0.9715	0.0072	0.8716	39207	38088	405	353
hg38.chr12_KI270836v1_alt	56134	GCA_029289425.2	0.7703	0.9671	0.0172	0.8922	43239	41816	965	861
hg38.chr12_KI270836v1_alt	56134	hg38	1.0000	1.0000	0.0206	1.0000	56134	56134	1155	1155
hg38.chr12_KI270836v1_alt	56134	hs1	0.7619	0.9888	0.0178	0.9100	42767	42288	1000	910
hg38.chr12_KI270837v1_alt	40090	GCA_028858775.2	0.9840	0.9820	0.0030	0.9748	39448	38739	119	116
hg38.chr12_KI270837v1_alt	40090	GCA_028878055.2	0.8941	0.9301	0.0000	0.0000	35846	33339	0	0
hg38.chr12_KI270837v1_alt	40090	GCA_028885625.2	0.9684	0.9595	0.0000	0.0000	38824	37252	0	0
hg38.chr12_KI270837v1_alt	40090	GCA_028885655.2	0.9681	0.9592	0.0000	0.0000	38811	37226	0	0
hg38.chr12_KI270837v1_alt	40090	GCA_029281585.2	0.9839	0.9842	0.0035	0.9577	39444	38821	142	136
hg38.chr12_KI270837v1_alt	40090	GCA_029289425.2	0.9837	0.9820	0.0030	0.9412	39436	38725	119	112
hg38.chr12_KI270837v1_alt	40090	hg38	0.9978	1.0000	0.0035	1.0000	40000	40000	142	142
hg38.chr12_KI270837v1_alt	40090	hs1	0.9825	0.9932	0.0000	0.0000	39388	39122	0	0
hg38.chr12_KI270904v1_alt	572349	GCA_028858775.2	0.9831	0.9880	0.0014	0.9912	562676	555914	800	793
hg38.chr12_KI270904v1_alt	572349	GCA_028878055.2	0.5694	0.9348	0.0000	0.0000	325897	304660	0	0
hg38.chr12_KI270904v1_alt	572349	GCA_028885625.2	0.9178	0.9675	0.0000	0.0000	525314	508259	0	0
hg38.chr12_KI270904v1_alt	572349	GCA_028885655.2	0.8935	0.9673	0.0000	0.0000	511391	494646	0	0
hg38.chr12_KI270904v1_alt	572349	GCA_029281585.2	0.9679	0.9852	0.0014	0.9938	553962	545772	800	795
hg38.chr12_KI270904v1_alt	572349	GCA_029289425.2	0.9822	0.9873	0.0014	0.9900	562171	555041	800	792
hg38.chr12_KI270904v1_alt	572349	hg38	1.0000	1.0000	0.0014	1.0000	572349	572349	800	800
hg38.chr12_KI270904v1_alt	572349	hs1	0.9992	0.9991	0.0014	1.0000	571896	571401	800	800
hg38.chr13	114364328	GCA_028858775.2	0.8231	0.9868	0.7888	0.9868	94136001	92892240	90211171	89018274
hg38.chr13	114364328	GCA_028878055.2	0.7721	0.9609	0.7293	0.9613	88298161	84845794	83406476	80175695
hg38.chr13	114364328	GCA_028885625.2	0.8028	0.9667	0.7596	0.9667	91808631	88751561	86870497	83976901
hg38.chr13	114364328	GCA_028885655.2	0.8023	0.9666	0.7592	0.9667	91756117	88695818	86830187	83936784
hg38.chr13	114364328	GCA_029281585.2	0.8209	0.9834	0.7739	0.9833	93887219	92330403	88507132	87030066
hg38.chr13	114364328	GCA_029289425.2	0.8239	0.9868	0.7890	0.9868	94222476	92976313	90234285	89039866
hg38.chr13	114364328	hg38	0.8388	1.0000	0.8075	1.0000	95932285	95932285	92346213	92346213
hg38.chr13	114364328	hs1	0.8374	0.9988	0.8055	0.9988	95768636	95657581	92114769	92008403
hg38.chr13_KI270838v1_alt	306913	GCA_028858775.2	0.9405	0.9789	0.0000	0.0000	288639	282556	0	0
hg38.chr13_KI270838v1_alt	306913	GCA_028878055.2	0.9044	0.9440	0.0000	0.0000	277587	262034	0	0
hg38.chr13_KI270838v1_alt	306913	GCA_028885625.2	0.9075	0.9522	0.0000	0.0000	278531	265219	0	0
hg38.chr13_KI270838v1_alt	306913	GCA_028885655.2	0.9083	0.9522	0.0000	0.0000	278768	265451	0	0
hg38.chr13_KI270838v1_alt	306913	GCA_029281585.2	0.8836	0.9743	0.0000	0.0000	271192	264226	0	0
hg38.chr13_KI270838v1_alt	306913	GCA_029289425.2	0.9402	0.9784	0.0000	0.0000	288566	282343	0	0
hg38.chr13_KI270838v1_alt	306913	hg38	1.0000	1.0000	0.0000	0.0000	306913	306913	0	0
hg38.chr13_KI270838v1_alt	306913	hs1	0.9631	0.9966	0.0000	0.0000	295585	294576	0	0
hg38.chr13_KI270839v1_alt	180306	GCA_028858775.2	0.9856	0.9875	0.1014	0.9894	177715	175497	18283	18090
hg38.chr13_KI270839v1_alt	180306	GCA_028878055.2	0.9792	0.9627	0.1005	0.9619	176564	169980	18127	17437
hg38.chr13_KI270839v1_alt	180306	GCA_028885625.2	0.9834	0.9677	0.1012	0.9671	177305	171577	18243	17642
hg38.chr13_KI270839v1_alt	180306	GCA_028885655.2	0.9833	0.9677	0.1012	0.9667	177297	171565	18245	17637
hg38.chr13_KI270839v1_alt	180306	GCA_029281585.2	0.9865	0.9846	0.1004	0.9869	177875	175142	18109	17871
hg38.chr13_KI270839v1_alt	180306	GCA_029289425.2	0.9854	0.9873	0.1014	0.9893	177671	175412	18287	18091
hg38.chr13_KI270839v1_alt	180306	hg38	0.9901	1.0000	0.1025	1.0000	178523	178523	18483	18483
hg38.chr13_KI270839v1_alt	180306	hs1	0.9897	0.9992	0.1025	0.9994	178453	178317	18482	18470
hg38.chr13_KI270840v1_alt	191684	GCA_028858775.2	0.9755	0.9889	0.0000	0.6667	186989	184922	3	2
hg38.chr13_KI270840v1_alt	191684	GCA_028878055.2	0.7467	0.9538	0.0000	0.0000	143125	136518	0	0
hg38.chr13_KI270840v1_alt	191684	GCA_028885625.2	0.8181	0.9695	0.0000	0.0000	156818	152042	0	0
hg38.chr13_KI270840v1_alt	191684	GCA_028885655.2	0.8141	0.9626	0.0000	0.0000	156052	150221	0	0
hg38.chr13_KI270840v1_alt	191684	GCA_029281585.2	0.9441	0.9789	0.0000	0.0000	180960	177134	0	0
hg38.chr13_KI270840v1_alt	191684	GCA_029289425.2	0.9754	0.9890	0.0000	0.6667	186976	184922	3	2
hg38.chr13_KI270840v1_alt	191684	hg38	1.0000	1.0000	0.0000	1.0000	191684	191684	3	3
hg38.chr13_KI270840v1_alt	191684	hs1	0.9864	0.9966	0.0000	0.0000	189080	188438	0	0
hg38.chr13_KI270841v1_alt	169134	GCA_028858775.2	0.9953	0.9868	0.0088	0.9906	168334	166104	1484	1470
hg38.chr13_KI270841v1_alt	169134	GCA_028878055.2	0.9215	0.9582	0.0086	0.9545	155851	149332	1450	1384
hg38.chr13_KI270841v1_alt	169134	GCA_028885625.2	0.9808	0.9626	0.0087	0.9469	165887	159681	1470	1392
hg38.chr13_KI270841v1_alt	169134	GCA_028885655.2	0.9807	0.9626	0.0087	0.9503	165870	159668	1470	1397
hg38.chr13_KI270841v1_alt	169134	GCA_029281585.2	0.9791	0.9830	0.0088	0.9824	165605	162790	1481	1455
hg38.chr13_KI270841v1_alt	169134	GCA_029289425.2	0.9954	0.9866	0.0088	0.9892	168362	166101	1484	1468
hg38.chr13_KI270841v1_alt	169134	hg38	1.0000	1.0000	0.0088	1.0000	169134	169134	1485	1485
hg38.chr13_KI270841v1_alt	169134	hs1	0.9754	0.9986	0.0000	0.0000	164979	164754	0	0
hg38.chr13_KI270842v1_alt	37287	GCA_028858775.2	0.9292	0.9757	0.0000	0.0000	34648	33805	0	0
hg38.chr13_KI270842v1_alt	37287	GCA_028878055.2	0.8280	0.9432	0.0000	0.0000	30874	29120	0	0
hg38.chr13_KI270842v1_alt	37287	GCA_028885625.2	0.8878	0.9529	0.0000	0.0000	33105	31545	0	0
hg38.chr13_KI270842v1_alt	37287	GCA_028885655.2	0.8842	0.9528	0.0000	0.0000	32970	31415	0	0
hg38.chr13_KI270842v1_alt	37287	GCA_029281585.2	0.8748	0.9747	0.0000	0.0000	32618	31794	0	0
hg38.chr13_KI270842v1_alt	37287	GCA_029289425.2	0.9141	0.9770	0.0000	0.0000	34083	33299	0	0
hg38.chr13_KI270842v1_alt	37287	hg38	1.0000	1.0000	0.0000	0.0000	37287	37287	0	0
hg38.chr13_KI270842v1_alt	37287	hs1	0.9611	0.9953	0.0000	0.0000	35838	35670	0	0
hg38.chr13_KI270843v1_alt	103832	GCA_028858775.2	0.9953	0.9836	0.0250	0.9830	103349	101654	2591	2547
hg38.chr13_KI270843v1_alt	103832	GCA_028878055.2	0.9830	0.9580	0.0249	0.9509	102066	97782	2586	2459
hg38.chr13_KI270843v1_alt	103832	GCA_028885625.2	0.9862	0.9654	0.0249	0.9698	102397	98851	2584	2506
hg38.chr13_KI270843v1_alt	103832	GCA_028885655.2	0.9892	0.9652	0.0250	0.9691	102712	99142	2593	2513
hg38.chr13_KI270843v1_alt	103832	GCA_029281585.2	0.9945	0.9815	0.0251	0.9827	103258	101351	2603	2558
hg38.chr13_KI270843v1_alt	103832	GCA_029289425.2	0.9957	0.9837	0.0250	0.9834	103381	101699	2592	2549
hg38.chr13_KI270843v1_alt	103832	hg38	1.0000	1.0000	0.0251	1.0000	103832	103832	2606	2606
hg38.chr13_KI270843v1_alt	103832	hs1	0.9994	0.9990	0.0251	1.0000	103768	103669	2606	2606
hg38.chr14	107043718	GCA_028858775.2	0.8050	0.9868	0.7549	0.9874	86171711	85035496	80802074	79781896
hg38.chr14	107043718	GCA_028878055.2	0.7415	0.9613	0.7009	0.9617	79368633	76296248	75030320	72153763
hg38.chr14	107043718	GCA_028885625.2	0.7867	0.9670	0.7388	0.9673	84213567	81435451	79081780	76499290
hg38.chr14	107043718	GCA_028885655.2	0.7863	0.9670	0.7381	0.9674	84170231	81395864	79011105	76431656
hg38.chr14	107043718	GCA_029281585.2	0.7998	0.9834	0.7471	0.9837	85614352	84192823	79967563	78665107
hg38.chr14	107043718	GCA_029289425.2	0.8067	0.9868	0.7572	0.9874	86357129	85215370	81048532	80025412
hg38.chr14	107043718	hg38	0.8457	1.0000	0.7768	1.0000	90522898	90522898	83154436	83154436
hg38.chr14	107043718	hs1	0.8256	0.9987	0.7743	0.9990	88374141	88254903	82888484	82805267
hg38.chr14_GL000009v2_random	201709	GCA_028858775.2	0.7792	0.9878	0.0000	0.0000	157179	155255	0	0
hg38.chr14_GL000009v2_random	201709	GCA_028878055.2	0.5626	0.9454	0.0000	0.0000	113473	107272	0	0
hg38.chr14_GL000009v2_random	201709	GCA_028885625.2	0.5729	0.9582	0.0000	0.0000	115569	110737	0	0
hg38.chr14_GL000009v2_random	201709	GCA_028885655.2	0.5726	0.9563	0.0000	0.0000	115502	110458	0	0
hg38.chr14_GL000009v2_random	201709	GCA_029281585.2	0.6353	0.9735	0.0000	0.0000	128136	124742	0	0
hg38.chr14_GL000009v2_random	201709	GCA_029289425.2	0.7788	0.9875	0.0000	1.0000	157092	155134	3	3
hg38.chr14_GL000009v2_random	201709	hg38	0.9982	1.0000	0.0275	1.0000	201353	201353	5537	5537
hg38.chr14_GL000009v2_random	201709	hs1	0.9929	0.9992	0.0020	0.9780	200270	200105	410	401
hg38.chr14_GL000194v1_random	191469	GCA_028858775.2	0.7686	0.9814	0.0000	0.0000	147160	144424	0	0
hg38.chr14_GL000194v1_random	191469	GCA_028878055.2	0.5263	0.9296	0.0000	0.0000	100772	93676	0	0
hg38.chr14_GL000194v1_random	191469	GCA_028885625.2	0.5649	0.9544	0.0000	0.0000	108169	103239	0	0
hg38.chr14_GL000194v1_random	191469	GCA_028885655.2	0.5647	0.9540	0.0000	0.0000	108116	103140	0	0
hg38.chr14_GL000194v1_random	191469	GCA_029281585.2	0.6076	0.9711	0.0000	0.0000	116346	112988	0	0
hg38.chr14_GL000194v1_random	191469	GCA_029289425.2	0.7771	0.9802	0.0000	0.0000	148785	145843	0	0
hg38.chr14_GL000194v1_random	191469	hg38	1.0000	1.0000	0.0104	1.0000	191469	191469	1985	1985
hg38.chr14_GL000194v1_random	191469	hs1	0.9988	0.9999	0.0086	0.9994	191243	191224	1641	1640
hg38.chr14_GL000225v1_random	211173	GCA_028858775.2	0.2390	0.9567	0.0000	0.0000	50461	48275	0	0
hg38.chr14_GL000225v1_random	211173	GCA_028878055.2	0.2317	0.9377	0.0000	0.0000	48920	45873	0	0
hg38.chr14_GL000225v1_random	211173	GCA_028885625.2	0.2353	0.9405	0.0000	0.0000	49692	46734	0	0
hg38.chr14_GL000225v1_random	211173	GCA_028885655.2	0.2352	0.9403	0.0000	0.0000	49658	46694	0	0
hg38.chr14_GL000225v1_random	211173	GCA_029281585.2	0.2375	0.9544	0.0000	0.0000	50158	47871	0	0
hg38.chr14_GL000225v1_random	211173	GCA_029289425.2	0.2390	0.9570	0.0000	0.0000	50467	48299	0	0
hg38.chr14_GL000225v1_random	211173	hg38	0.9878	1.0000	0.5122	1.0000	208602	208602	108168	108168
hg38.chr14_GL000225v1_random	211173	hs1	0.9167	0.9800	0.4412	0.9926	193574	189700	93165	92475
hg38.chr14_KI270722v1_random	194050	GCA_028858775.2	0.6609	0.9690	0.0000	0.4000	128240	124265	5	2
hg38.chr14_KI270722v1_random	194050	GCA_028878055.2	0.4041	0.9313	0.0000	0.0000	78419	73034	0	0
hg38.chr14_KI270722v1_random	194050	GCA_028885625.2	0.5105	0.9590	0.0000	0.0000	99054	94993	0	0
hg38.chr14_KI270722v1_random	194050	GCA_028885655.2	0.5099	0.9580	0.0036	0.9188	98952	94794	702	645
hg38.chr14_KI270722v1_random	194050	GCA_029281585.2	0.5743	0.9713	0.0007	0.5000	111439	108240	138	69
hg38.chr14_KI270722v1_random	194050	GCA_029289425.2	0.6431	0.9690	0.0001	0.6000	124786	120918	10	6
hg38.chr14_KI270722v1_random	194050	hg38	1.0000	1.0000	0.1030	1.0000	194050	194050	19994	19994
hg38.chr14_KI270722v1_random	194050	hs1	0.9956	0.9992	0.0515	0.9999	193194	193039	10002	10001
hg38.chr14_KI270723v1_random	38115	GCA_028858775.2	0.7978	0.9645	0.0005	0.7368	30410	29329	19	14
hg38.chr14_KI270723v1_random	38115	GCA_028878055.2	0.5470	0.9229	0.0000	0.0000	20850	19242	0	0
hg38.chr14_KI270723v1_random	38115	GCA_028885625.2	0.5489	0.9220	0.0000	0.0000	20922	19290	0	0
hg38.chr14_KI270723v1_random	38115	GCA_028885655.2	0.5506	0.9221	0.0000	0.0000	20988	19354	0	0
hg38.chr14_KI270723v1_random	38115	GCA_029281585.2	0.7204	0.9838	0.0067	0.9066	27459	27014	257	233
hg38.chr14_KI270723v1_random	38115	GCA_029289425.2	0.8135	0.9707	0.0005	0.7368	31006	30099	19	14
hg38.chr14_KI270723v1_random	38115	hg38	1.0000	1.0000	0.0157	1.0000	38115	38115	597	597
hg38.chr14_KI270723v1_random	38115	hs1	0.9998	0.9993	0.0000	0.0000	38108	38080	0	0
hg38.chr14_KI270724v1_random	39555	GCA_028858775.2	0.8242	0.9673	0.0000	0.0000	32601	31535	0	0
hg38.chr14_KI270724v1_random	39555	GCA_028878055.2	0.5637	0.9271	0.0000	0.0000	22296	20671	0	0
hg38.chr14_KI270724v1_random	39555	GCA_028885625.2	0.5684	0.9281	0.0000	0.0000	22483	20866	0	0
hg38.chr14_KI270724v1_random	39555	GCA_028885655.2	0.5701	0.9279	0.0000	0.0000	22549	20923	0	0
hg38.chr14_KI270724v1_random	39555	GCA_029281585.2	0.7459	0.9860	0.0000	0.0000	29505	29093	0	0
hg38.chr14_KI270724v1_random	39555	GCA_029289425.2	0.8393	0.9731	0.0000	0.0000	33197	32303	0	0
hg38.chr14_KI270724v1_random	39555	hg38	1.0000	1.0000	0.0001	1.0000	39555	39555	4	4
hg38.chr14_KI270724v1_random	39555	hs1	0.9832	0.9927	0.0001	1.0000	38891	38608	3	3
hg38.chr14_KI270725v1_random	172810	GCA_028858775.2	0.7076	0.9857	0.0106	0.9264	122272	120518	1835	1700
hg38.chr14_KI270725v1_random	172810	GCA_028878055.2	0.4216	0.9501	0.0000	0.0000	72851	69216	0	0
hg38.chr14_KI270725v1_random	172810	GCA_028885625.2	0.5547	0.9697	0.0000	0.0000	95851	92947	0	0
hg38.chr14_KI270725v1_random	172810	GCA_028885655.2	0.5545	0.9697	0.0000	0.0000	95819	92913	0	0
hg38.chr14_KI270725v1_random	172810	GCA_029281585.2	0.6943	0.9885	0.0002	0.9714	119977	118601	35	34
hg38.chr14_KI270725v1_random	172810	GCA_029289425.2	0.7068	0.9854	0.0101	0.9308	122145	120364	1749	1628
hg38.chr14_KI270725v1_random	172810	hg38	1.0000	1.0000	0.2545	1.0000	172810	172810	43988	43988
hg38.chr14_KI270725v1_random	172810	hs1	0.9999	0.9994	0.2545	0.9982	172785	172683	43974	43897
hg38.chr14_KI270726v1_random	43739	GCA_028858775.2	0.5543	0.9617	0.0000	0.0000	24243	23314	0	0
hg38.chr14_KI270726v1_random	43739	GCA_028885625.2	0.5377	0.9389	0.0000	0.0000	23518	22080	0	0
hg38.chr14_KI270726v1_random	43739	GCA_028885655.2	0.5373	0.9399	0.0000	0.0000	23502	22090	0	0
hg38.chr14_KI270726v1_random	43739	GCA_029281585.2	0.5395	0.9556	0.0000	0.0000	23596	22548	0	0
hg38.chr14_KI270726v1_random	43739	GCA_029289425.2	0.5561	0.9605	0.0000	0.0000	24325	23363	0	0
hg38.chr14_KI270726v1_random	43739	hg38	1.0000	1.0000	0.0024	1.0000	43739	43739	105	105
hg38.chr14_KI270726v1_random	43739	hs1	0.7131	0.9688	0.0001	0.5000	31189	30217	4	2
hg38.chr14_KI270844v1_alt	322166	GCA_028858775.2	0.9670	0.9882	0.0077	0.9824	311520	307844	2495	2451
hg38.chr14_KI270844v1_alt	322166	GCA_028878055.2	0.9502	0.9650	0.0076	0.9577	306137	295428	2460	2356
hg38.chr14_KI270844v1_alt	322166	GCA_028885625.2	0.9562	0.9708	0.0076	0.9632	308050	299045	2448	2358
hg38.chr14_KI270844v1_alt	322166	GCA_028885655.2	0.9564	0.9709	0.0076	0.9628	308120	299146	2447	2356
hg38.chr14_KI270844v1_alt	322166	GCA_029281585.2	0.9614	0.9840	0.0078	0.9796	309741	304783	2503	2452
hg38.chr14_KI270844v1_alt	322166	GCA_029289425.2	0.9671	0.9882	0.0078	0.9820	311556	307872	2497	2452
hg38.chr14_KI270844v1_alt	322166	hg38	1.0000	1.0000	0.0078	1.0000	322166	322166	2503	2503
hg38.chr14_KI270844v1_alt	322166	hs1	0.9993	0.9989	0.0078	0.9980	321938	321578	2503	2498
hg38.chr14_KI270845v1_alt	180703	GCA_028858775.2	0.9746	0.9822	0.0088	0.9792	176118	172985	1589	1556
hg38.chr14_KI270845v1_alt	180703	GCA_028878055.2	0.8437	0.9477	0.0063	0.9423	152459	144488	1143	1077
hg38.chr14_KI270845v1_alt	180703	GCA_028885625.2	0.9592	0.9606	0.0084	0.9408	173327	166495	1519	1429
hg38.chr14_KI270845v1_alt	180703	GCA_028885655.2	0.9593	0.9604	0.0084	0.9401	173352	166489	1519	1428
hg38.chr14_KI270845v1_alt	180703	GCA_029281585.2	0.9696	0.9785	0.0088	0.9805	175211	171452	1586	1555
hg38.chr14_KI270845v1_alt	180703	GCA_029289425.2	0.9758	0.9821	0.0088	0.9805	176331	173182	1589	1558
hg38.chr14_KI270845v1_alt	180703	hg38	1.0000	1.0000	0.0089	1.0000	180703	180703	1606	1606
hg38.chr14_KI270845v1_alt	180703	hs1	0.9724	0.9981	0.0000	0.0000	175720	175393	0	0
hg38.chr14_KI270846v1_alt	1351393	GCA_028858775.2	0.7226	0.9622	0.0003	0.8920	976583	939645	463	413
hg38.chr14_KI270846v1_alt	1351393	GCA_028878055.2	0.1992	0.9263	0.0000	0.0000	269180	249330	0	0
hg38.chr14_KI270846v1_alt	1351393	GCA_028885625.2	0.7396	0.9464	0.0000	0.0000	999490	945873	0	0
hg38.chr14_KI270846v1_alt	1351393	GCA_028885655.2	0.7331	0.9462	0.0000	0.0000	990734	937397	0	0
hg38.chr14_KI270846v1_alt	1351393	GCA_029281585.2	0.8005	0.9667	0.0000	0.8333	1081767	1045781	12	10
hg38.chr14_KI270846v1_alt	1351393	GCA_029289425.2	0.8432	0.9690	0.0012	0.8762	1139494	1104145	1680	1472
hg38.chr14_KI270846v1_alt	1351393	hg38	1.0000	1.0000	0.0043	1.0000	1351393	1351393	5827	5827
hg38.chr14_KI270846v1_alt	1351393	hs1	0.9756	0.9941	0.0013	0.9117	1318451	1310730	1778	1621
hg38.chr14_KI270847v1_alt	1511111	GCA_028858775.2	0.9910	0.9866	0.0000	0.0000	1497520	1477405	0	0
hg38.chr14_KI270847v1_alt	1511111	GCA_028878055.2	0.9347	0.9605	0.0000	0.8333	1412368	1356520	6	5
hg38.chr14_KI270847v1_alt	1511111	GCA_028885625.2	0.9682	0.9669	0.0001	0.9714	1463037	1414542	105	102
hg38.chr14_KI270847v1_alt	1511111	GCA_028885655.2	0.9683	0.9669	0.0001	0.9714	1463137	1414719	105	102
hg38.chr14_KI270847v1_alt	1511111	GCA_029281585.2	0.9866	0.9843	0.0000	0.0000	1490871	1467497	0	0
hg38.chr14_KI270847v1_alt	1511111	GCA_029289425.2	0.9911	0.9865	0.0000	0.0000	1497657	1477396	0	0
hg38.chr14_KI270847v1_alt	1511111	hg38	1.0000	1.0000	0.0001	1.0000	1511111	1511111	107	107
hg38.chr14_KI270847v1_alt	1511111	hs1	0.9963	0.9990	0.0001	1.0000	1505577	1504108	107	107
hg38.chr15	101991189	GCA_028858775.2	0.7815	0.9865	0.6742	0.9870	79703560	78626087	68765242	67871866
hg38.chr15	101991189	GCA_028878055.2	0.7344	0.9608	0.6412	0.9616	74902977	71969084	65399201	62887339
hg38.chr15	101991189	GCA_028885625.2	0.7588	0.9666	0.6558	0.9670	77394285	74807443	66884099	64676410
hg38.chr15	101991189	GCA_028885655.2	0.7588	0.9666	0.6555	0.9670	77388413	74804132	66853330	64648093
hg38.chr15	101991189	GCA_029281585.2	0.7776	0.9831	0.6677	0.9834	79308008	77964720	68096956	66969636
hg38.chr15	101991189	GCA_029289425.2	0.7827	0.9864	0.6737	0.9870	79828002	78740852	68708954	67816276
hg38.chr15	101991189	hg38	0.8086	1.0000	0.6942	1.0000	82471811	82471811	70798080	70798080
hg38.chr15	101991189	hs1	0.8014	0.9989	0.6886	0.9989	81738282	81646122	70231405	70154268
hg38.chr15_GL383554v1_alt	296527	GCA_028858775.2	0.9082	0.9811	0.0000	0.0000	269304	264203	0	0
hg38.chr15_GL383554v1_alt	296527	GCA_028878055.2	0.7564	0.9487	0.0000	0.0000	224286	212781	0	0
hg38.chr15_GL383554v1_alt	296527	GCA_028885625.2	0.8305	0.9589	0.0000	0.0000	246256	236128	0	0
hg38.chr15_GL383554v1_alt	296527	GCA_028885655.2	0.8312	0.9590	0.0000	0.0000	246461	236358	0	0
hg38.chr15_GL383554v1_alt	296527	GCA_029281585.2	0.8458	0.9681	0.0000	0.0000	250809	242818	0	0
hg38.chr15_GL383554v1_alt	296527	GCA_029289425.2	0.9031	0.9773	0.0000	0.0000	267795	261716	0	0
hg38.chr15_GL383554v1_alt	296527	hg38	1.0000	1.0000	0.0169	1.0000	296527	296527	5011	5011
hg38.chr15_GL383554v1_alt	296527	hs1	0.9952	0.9996	0.0169	0.9994	295098	294973	5011	5008
hg38.chr15_GL383555v2_alt	388773	GCA_028858775.2	0.9966	0.9871	0.0272	0.9865	387446	382452	10578	10435
hg38.chr15_GL383555v2_alt	388773	GCA_028878055.2	0.9889	0.9621	0.0270	0.9619	384447	369894	10485	10085
hg38.chr15_GL383555v2_alt	388773	GCA_028885625.2	0.9886	0.9667	0.0271	0.9671	384322	371530	10544	10197
hg38.chr15_GL383555v2_alt	388773	GCA_028885655.2	0.9887	0.9667	0.0271	0.9666	384378	371574	10540	10188
hg38.chr15_GL383555v2_alt	388773	GCA_029281585.2	0.9961	0.9838	0.0272	0.9858	387248	380990	10576	10426
hg38.chr15_GL383555v2_alt	388773	GCA_029289425.2	0.9911	0.9869	0.0241	0.9862	385321	380286	9358	9229
hg38.chr15_GL383555v2_alt	388773	hg38	1.0000	1.0000	0.0272	1.0000	388773	388773	10585	10585
hg38.chr15_GL383555v2_alt	388773	hs1	0.9991	0.9988	0.0272	0.9998	388426	387963	10585	10583
hg38.chr15_KI270727v1_random	448248	GCA_028858775.2	0.7810	0.9773	0.0000	0.0000	350089	342135	0	0
hg38.chr15_KI270727v1_random	448248	GCA_028878055.2	0.3647	0.9428	0.0000	0.0000	163471	154114	0	0
hg38.chr15_KI270727v1_random	448248	GCA_028885625.2	0.7265	0.9599	0.0000	0.0000	325667	312620	0	0
hg38.chr15_KI270727v1_random	448248	GCA_028885655.2	0.7281	0.9625	0.0000	0.0000	326355	314117	0	0
hg38.chr15_KI270727v1_random	448248	GCA_029281585.2	0.8744	0.9831	0.0000	0.0000	391948	385339	0	0
hg38.chr15_KI270727v1_random	448248	GCA_029289425.2	0.7883	0.9767	0.0000	0.0000	353355	345128	0	0
hg38.chr15_KI270727v1_random	448248	hg38	1.0000	1.0000	0.0000	0.0000	448248	448248	0	0
hg38.chr15_KI270727v1_random	448248	hs1	0.9973	0.9980	0.0000	0.0000	447039	446161	0	0
hg38.chr15_KI270848v1_alt	327382	GCA_028858775.2	0.8833	0.9811	0.0015	0.8891	289185	283724	505	449
hg38.chr15_KI270848v1_alt	327382	GCA_028878055.2	0.8043	0.9551	0.0002	0.8889	263313	251481	54	48
hg38.chr15_KI270848v1_alt	327382	GCA_028885625.2	0.7824	0.9565	0.0002	0.8333	256150	245020	54	45
hg38.chr15_KI270848v1_alt	327382	GCA_028885655.2	0.7823	0.9566	0.0002	0.8333	256120	245005	54	45
hg38.chr15_KI270848v1_alt	327382	GCA_029281585.2	0.8901	0.9781	0.0000	0.0000	291399	285013	0	0
hg38.chr15_KI270848v1_alt	327382	GCA_029289425.2	0.8728	0.9801	0.0015	0.9280	285755	280055	500	464
hg38.chr15_KI270848v1_alt	327382	hg38	1.0000	1.0000	0.0089	1.0000	327382	327382	2906	2906
hg38.chr15_KI270848v1_alt	327382	hs1	0.9481	0.9974	0.0064	0.9212	310380	309561	2095	1930
hg38.chr15_KI270849v1_alt	244917	GCA_028858775.2	0.9903	0.9885	0.0001	0.9583	242542	239754	24	23
hg38.chr15_KI270849v1_alt	244917	GCA_028878055.2	0.7859	0.9538	0.0000	1.0000	192485	183595	1	1
hg38.chr15_KI270849v1_alt	244917	GCA_028885625.2	0.9350	0.9712	0.0000	1.0000	228996	222390	1	1
hg38.chr15_KI270849v1_alt	244917	GCA_028885655.2	0.9339	0.9710	0.0000	1.0000	228725	222088	1	1
hg38.chr15_KI270849v1_alt	244917	GCA_029281585.2	0.9897	0.9841	0.0001	1.0000	242389	238526	16	16
hg38.chr15_KI270849v1_alt	244917	GCA_029289425.2	0.9889	0.9871	0.0001	0.9583	242200	239064	24	23
hg38.chr15_KI270849v1_alt	244917	hg38	1.0000	1.0000	0.0001	1.0000	244917	244917	24	24
hg38.chr15_KI270849v1_alt	244917	hs1	0.9864	0.9976	0.0000	0.0000	241596	241012	0	0
hg38.chr15_KI270850v1_alt	430880	GCA_028858775.2	0.8078	0.9841	0.0000	0.0000	348054	342506	0	0
hg38.chr15_KI270850v1_alt	430880	GCA_028878055.2	0.5589	0.9556	0.0000	0.0000	240801	230112	0	0
hg38.chr15_KI270850v1_alt	430880	GCA_028885625.2	0.6442	0.9671	0.0000	0.0000	277566	268422	0	0
hg38.chr15_KI270850v1_alt	430880	GCA_028885655.2	0.6441	0.9669	0.0000	0.0000	277551	268359	0	0
hg38.chr15_KI270850v1_alt	430880	GCA_029281585.2	0.7703	0.9815	0.0000	0.0000	331925	325773	0	0
hg38.chr15_KI270850v1_alt	430880	GCA_029289425.2	0.8246	0.9842	0.0000	0.0000	355316	349691	0	0
hg38.chr15_KI270850v1_alt	430880	hg38	1.0000	1.0000	0.0003	1.0000	430880	430880	142	142
hg38.chr15_KI270850v1_alt	430880	hs1	0.9893	0.9989	0.0003	1.0000	426270	425800	142	142
hg38.chr15_KI270851v1_alt	263054	GCA_028858775.2	0.6910	0.9753	0.0000	0.0000	181779	177287	0	0
hg38.chr15_KI270851v1_alt	263054	GCA_028878055.2	0.6998	0.9508	0.0000	0.0000	184073	175010	0	0
hg38.chr15_KI270851v1_alt	263054	GCA_028885625.2	0.7033	0.9541	0.0000	0.0000	185006	176516	0	0
hg38.chr15_KI270851v1_alt	263054	GCA_028885655.2	0.7030	0.9544	0.0000	0.0000	184929	176502	0	0
hg38.chr15_KI270851v1_alt	263054	GCA_029281585.2	0.8285	0.9768	0.0000	0.0000	217940	212875	0	0
hg38.chr15_KI270851v1_alt	263054	GCA_029289425.2	0.7180	0.9707	0.0000	0.0000	188873	183332	0	0
hg38.chr15_KI270851v1_alt	263054	hg38	1.0000	1.0000	0.0000	0.0000	263054	263054	0	0
hg38.chr15_KI270851v1_alt	263054	hs1	0.9946	0.9992	0.0000	0.0000	261623	261409	0	0
hg38.chr15_KI270852v1_alt	478999	GCA_028858775.2	0.7832	0.9757	0.0000	0.0000	375146	366032	0	0
hg38.chr15_KI270852v1_alt	478999	GCA_028878055.2	0.3927	0.9428	0.0001	0.7018	188112	177347	57	40
hg38.chr15_KI270852v1_alt	478999	GCA_028885625.2	0.7383	0.9598	0.0058	0.9339	353626	339427	2799	2614
hg38.chr15_KI270852v1_alt	478999	GCA_028885655.2	0.7397	0.9622	0.0059	0.9360	354328	340937	2813	2633
hg38.chr15_KI270852v1_alt	478999	GCA_029281585.2	0.8786	0.9834	0.0000	0.0000	420833	413855	0	0
hg38.chr15_KI270852v1_alt	478999	GCA_029289425.2	0.7900	0.9752	0.0000	0.0000	378404	369011	0	0
hg38.chr15_KI270852v1_alt	478999	hg38	1.0000	1.0000	0.0068	1.0000	478999	478999	3280	3280
hg38.chr15_KI270852v1_alt	478999	hs1	0.9974	0.9980	0.0068	0.9924	477735	476797	3278	3253
hg38.chr15_KI270905v1_alt	5161414	GCA_028858775.2	0.8606	0.9849	0.0019	0.9722	4442024	4375047	9618	9351
hg38.chr15_KI270905v1_alt	5161414	GCA_028878055.2	0.7822	0.9577	0.0015	0.9464	4037467	3866669	7895	7472
hg38.chr15_KI270905v1_alt	5161414	GCA_028885625.2	0.8168	0.9642	0.0016	0.9501	4215691	4064707	8238	7827
hg38.chr15_KI270905v1_alt	5161414	GCA_028885655.2	0.8171	0.9640	0.0018	0.9448	4217324	4065667	9101	8599
hg38.chr15_KI270905v1_alt	5161414	GCA_029281585.2	0.8461	0.9816	0.0015	0.9733	4366884	4286453	7501	7301
hg38.chr15_KI270905v1_alt	5161414	GCA_029289425.2	0.8603	0.9845	0.0017	0.9722	4440622	4371949	8932	8684
hg38.chr15_KI270905v1_alt	5161414	hg38	0.9208	1.0000	0.0034	1.0000	4752759	4752759	17293	17293
hg38.chr15_KI270905v1_alt	5161414	hs1	0.9070	0.9990	0.0033	0.9937	4681428	4676654	16842	16736
hg38.chr15_KI270906v1_alt	196384	GCA_028858775.2	0.8078	0.9763	0.0011	0.9682	158630	154869	220	213
hg38.chr15_KI270906v1_alt	196384	GCA_028878055.2	0.6899	0.9506	0.0000	0.0000	135481	128786	0	0
hg38.chr15_KI270906v1_alt	196384	GCA_028885625.2	0.6511	0.9486	0.0000	0.0000	127875	121306	0	0
hg38.chr15_KI270906v1_alt	196384	GCA_028885655.2	0.6510	0.9485	0.0000	0.0000	127838	121260	0	0
hg38.chr15_KI270906v1_alt	196384	GCA_029281585.2	0.8195	0.9733	0.0011	0.9224	160944	156643	219	202
hg38.chr15_KI270906v1_alt	196384	GCA_029289425.2	0.7886	0.9739	0.0011	0.9591	154878	150835	220	211
hg38.chr15_KI270906v1_alt	196384	hg38	1.0000	1.0000	0.0044	1.0000	196384	196384	870	870
hg38.chr15_KI270906v1_alt	196384	hs1	0.9136	0.9976	0.0037	0.9779	179416	178984	724	708
hg38.chr16	90338345	GCA_028858775.2	0.8582	0.9849	0.7373	0.9848	77529663	76356857	66607007	65596173
hg38.chr16	90338345	GCA_028878055.2	0.7915	0.9548	0.6897	0.9555	71501596	68266923	62310456	59537577
hg38.chr16	90338345	GCA_028885625.2	0.8202	0.9625	0.7126	0.9628	74093467	71312647	64377690	61980368
hg38.chr16	90338345	GCA_028885655.2	0.8199	0.9625	0.7121	0.9628	74071153	71292454	64326181	61931977
hg38.chr16	90338345	GCA_029281585.2	0.8465	0.9808	0.7245	0.9809	76468053	74996475	65451374	64202101
hg38.chr16	90338345	GCA_029289425.2	0.8581	0.9849	0.7339	0.9848	77518429	76346089	66299387	65294620
hg38.chr16	90338345	hg38	0.8897	1.0000	0.7723	1.0000	80371861	80371861	69771083	69771083
hg38.chr16	90338345	hs1	0.8808	0.9987	0.7612	0.9987	79569043	79469385	68762400	68674664
hg38.chr16_GL383556v1_alt	192462	GCA_028858775.2	0.9763	0.9874	0.0009	0.9889	187897	185536	180	178
hg38.chr16_GL383556v1_alt	192462	GCA_028878055.2	0.9621	0.9555	0.0002	0.8889	185172	176926	45	40
hg38.chr16_GL383556v1_alt	192462	GCA_028885625.2	0.9796	0.9671	0.0002	0.9167	188528	182331	36	33
hg38.chr16_GL383556v1_alt	192462	GCA_028885655.2	0.9798	0.9668	0.0002	0.9167	188582	182323	36	33
hg38.chr16_GL383556v1_alt	192462	GCA_029281585.2	0.9847	0.9836	0.0004	0.9639	189514	186404	83	80
hg38.chr16_GL383556v1_alt	192462	GCA_029289425.2	0.9876	0.9868	0.0008	0.9686	190077	187561	159	154
hg38.chr16_GL383556v1_alt	192462	hg38	0.9978	1.0000	0.0011	1.0000	192043	192043	206	206
hg38.chr16_GL383556v1_alt	192462	hs1	0.9968	0.9989	0.0011	1.0000	191848	191638	206	206
hg38.chr16_GL383557v1_alt	89672	GCA_028858775.2	0.9934	0.9895	0.0463	0.9894	89076	88144	4153	4109
hg38.chr16_GL383557v1_alt	89672	GCA_028878055.2	0.9287	0.9573	0.0461	0.9526	83282	79724	4136	3940
hg38.chr16_GL383557v1_alt	89672	GCA_028885625.2	0.9738	0.9698	0.0451	0.9679	87326	84689	4047	3917
hg38.chr16_GL383557v1_alt	89672	GCA_028885655.2	0.9720	0.9698	0.0452	0.9681	87164	84535	4050	3921
hg38.chr16_GL383557v1_alt	89672	GCA_029281585.2	0.9932	0.9843	0.0464	0.9839	89062	87662	4158	4091
hg38.chr16_GL383557v1_alt	89672	GCA_029289425.2	0.9932	0.9894	0.0463	0.9889	89063	88123	4154	4108
hg38.chr16_GL383557v1_alt	89672	hg38	1.0000	1.0000	0.0465	1.0000	89672	89672	4167	4167
hg38.chr16_GL383557v1_alt	89672	hs1	0.9998	0.9992	0.0465	0.9986	89656	89583	4167	4161
hg38.chr16_KI270728v1_random	1872759	GCA_028858775.2	0.7605	0.9778	0.0003	0.9625	1424270	1392623	534	514
hg38.chr16_KI270728v1_random	1872759	GCA_028878055.2	0.3491	0.9445	0.0000	0.9556	653780	617479	45	43
hg38.chr16_KI270728v1_random	1872759	GCA_028885625.2	0.4963	0.9414	0.0008	0.8888	929445	874995	1574	1399
hg38.chr16_KI270728v1_random	1872759	GCA_028885655.2	0.4953	0.9415	0.0008	0.8898	927500	873214	1588	1413
hg38.chr16_KI270728v1_random	1872759	GCA_029281585.2	0.6816	0.9600	0.0068	0.9790	1276420	1225422	12709	12442
hg38.chr16_KI270728v1_random	1872759	GCA_029289425.2	0.7671	0.9775	0.0002	0.9530	1436551	1404251	319	304
hg38.chr16_KI270728v1_random	1872759	hg38	0.8391	1.0000	0.0101	1.0000	1571429	1571429	18950	18950
hg38.chr16_KI270728v1_random	1872759	hs1	0.8332	0.9995	0.0091	0.9992	1560346	1559491	17121	17107
hg38.chr16_KI270853v1_alt	2659700	GCA_028858775.2	0.9357	0.9863	0.0001	0.9041	2488728	2454676	146	132
hg38.chr16_KI270853v1_alt	2659700	GCA_028878055.2	0.8475	0.9533	0.0001	0.6475	2254016	2148664	261	169
hg38.chr16_KI270853v1_alt	2659700	GCA_028885625.2	0.8547	0.9613	0.0001	0.6890	2273331	2185434	283	195
hg38.chr16_KI270853v1_alt	2659700	GCA_028885655.2	0.8553	0.9613	0.0001	0.6396	2274958	2187019	283	181
hg38.chr16_KI270853v1_alt	2659700	GCA_029281585.2	0.8884	0.9823	0.0001	0.7785	2362977	2321042	325	253
hg38.chr16_KI270853v1_alt	2659700	GCA_029289425.2	0.9326	0.9862	0.0001	0.8824	2480514	2446332	153	135
hg38.chr16_KI270853v1_alt	2659700	hg38	1.0000	1.0000	0.0010	1.0000	2659700	2659700	2571	2571
hg38.chr16_KI270853v1_alt	2659700	hs1	0.9920	0.9991	0.0002	0.9927	2638552	2636117	412	409
hg38.chr16_KI270854v1_alt	134193	GCA_028858775.2	0.9392	0.9813	0.0009	0.9569	126029	123667	116	111
hg38.chr16_KI270854v1_alt	134193	GCA_028878055.2	0.9008	0.9489	0.0008	0.9459	120877	114703	111	105
hg38.chr16_KI270854v1_alt	134193	GCA_028885625.2	0.9228	0.9586	0.0004	0.9574	123827	118704	47	45
hg38.chr16_KI270854v1_alt	134193	GCA_028885655.2	0.9214	0.9586	0.0004	0.9574	123652	118534	47	45
hg38.chr16_KI270854v1_alt	134193	GCA_029281585.2	0.9368	0.9762	0.0008	0.9107	125710	122717	112	102
hg38.chr16_KI270854v1_alt	134193	GCA_029289425.2	0.9414	0.9819	0.0005	0.9231	126325	124034	65	60
hg38.chr16_KI270854v1_alt	134193	hg38	1.0000	1.0000	0.0095	1.0000	134193	134193	1273	1273
hg38.chr16_KI270854v1_alt	134193	hs1	0.9821	0.9985	0.0091	0.9844	131789	131587	1220	1201
hg38.chr16_KI270855v1_alt	232857	GCA_028858775.2	0.9875	0.9880	0.0038	0.9351	229945	227193	878	821
hg38.chr16_KI270855v1_alt	232857	GCA_028878055.2	0.9474	0.9557	0.0000	0.0000	220618	210846	0	0
hg38.chr16_KI270855v1_alt	232857	GCA_028885625.2	0.9671	0.9621	0.0044	0.8935	225205	216679	1014	906
hg38.chr16_KI270855v1_alt	232857	GCA_028885655.2	0.9660	0.9622	0.0024	0.9088	224947	216455	548	498
hg38.chr16_KI270855v1_alt	232857	GCA_029281585.2	0.9844	0.9808	0.0045	0.9007	229226	224831	1037	934
hg38.chr16_KI270855v1_alt	232857	GCA_029289425.2	0.9804	0.9882	0.0034	0.9281	228294	225606	793	736
hg38.chr16_KI270855v1_alt	232857	hg38	1.0000	1.0000	0.0081	1.0000	232857	232857	1878	1878
hg38.chr16_KI270855v1_alt	232857	hs1	0.9964	0.9984	0.0051	0.9644	232029	231656	1180	1138
hg38.chr16_KI270856v1_alt	63982	GCA_028858775.2	0.9471	0.9800	0.0172	0.9836	60597	59383	1100	1082
hg38.chr16_KI270856v1_alt	63982	GCA_028878055.2	0.8615	0.9412	0.0171	0.9371	55122	51882	1097	1028
hg38.chr16_KI270856v1_alt	63982	GCA_028885625.2	0.9282	0.9528	0.0171	0.9599	59388	56583	1096	1052
hg38.chr16_KI270856v1_alt	63982	GCA_028885655.2	0.9353	0.9536	0.0171	0.9580	59840	57065	1095	1049
hg38.chr16_KI270856v1_alt	63982	GCA_029281585.2	0.8775	0.9762	0.0171	0.9826	56145	54810	1093	1074
hg38.chr16_KI270856v1_alt	63982	GCA_029289425.2	0.9410	0.9774	0.0173	0.9828	60205	58847	1105	1086
hg38.chr16_KI270856v1_alt	63982	hg38	1.0000	1.0000	0.0173	1.0000	63982	63982	1107	1107
hg38.chr16_KI270856v1_alt	63982	hs1	0.9996	0.9977	0.0173	0.9973	63958	63811	1107	1104
hg38.chr17	83257441	GCA_028858775.2	0.9281	0.9867	0.7769	0.9870	77268395	76242708	64686046	63842100
hg38.chr17	83257441	GCA_028878055.2	0.8581	0.9590	0.7019	0.9594	71445992	68516819	58438436	56063743
hg38.chr17	83257441	GCA_028885625.2	0.9025	0.9658	0.7517	0.9655	75139819	72568203	62586016	60425397
hg38.chr17	83257441	GCA_028885655.2	0.9025	0.9658	0.7512	0.9655	75138276	72566251	62540730	60382113
hg38.chr17	83257441	GCA_029281585.2	0.9206	0.9840	0.7687	0.9838	76650720	75424815	64002993	62966903
hg38.chr17	83257441	GCA_029289425.2	0.9271	0.9867	0.7741	0.9869	77188061	76165004	64450556	63607915
hg38.chr17	83257441	hg38	0.9729	1.0000	0.8252	1.0000	80999429	80999429	68705483	68705483
hg38.chr17	83257441	hs1	0.9621	0.9970	0.8140	0.9967	80104701	79860475	67767935	67545014
hg38.chr17_GL000205v2_random	185591	GCA_028858775.2	0.7285	0.9784	0.0000	1.0000	135199	132276	1	1
hg38.chr17_GL000205v2_random	185591	GCA_028878055.2	0.4772	0.9307	0.0051	0.9501	88569	82433	941	894
hg38.chr17_GL000205v2_random	185591	GCA_028885625.2	0.5721	0.9549	0.0002	0.9268	106169	101385	41	38
hg38.chr17_GL000205v2_random	185591	GCA_028885655.2	0.5724	0.9546	0.0190	0.8938	106229	101411	3530	3155
hg38.chr17_GL000205v2_random	185591	GCA_029281585.2	0.6623	0.9649	0.0006	0.9316	122923	118608	117	109
hg38.chr17_GL000205v2_random	185591	GCA_029289425.2	0.7328	0.9745	0.0000	0.0000	135992	132530	0	0
hg38.chr17_GL000205v2_random	185591	hg38	1.0000	1.0000	0.2393	1.0000	185591	185591	44412	44412
hg38.chr17_GL000205v2_random	185591	hs1	0.9961	0.9952	0.0024	0.7699	184861	183972	439	338
hg38.chr17_GL000258v2_alt	1821992	GCA_028858775.2	0.9263	0.9882	0.0000	0.8571	1687639	1667691	7	6
hg38.chr17_GL000258v2_alt	1821992	GCA_028878055.2	0.8546	0.9620	0.0000	1.0000	1557133	1497988	6	6
hg38.chr17_GL000258v2_alt	1821992	GCA_028885625.2	0.9000	0.9672	0.0000	0.8571	1639733	1585947	7	6
hg38.chr17_GL000258v2_alt	1821992	GCA_028885655.2	0.8999	0.9672	0.0000	0.8571	1639581	1585776	7	6
hg38.chr17_GL000258v2_alt	1821992	GCA_029281585.2	0.9243	0.9889	0.0000	1.0000	1684120	1665388	13	13
hg38.chr17_GL000258v2_alt	1821992	GCA_029289425.2	0.9230	0.9882	0.0000	1.0000	1681786	1661925	7	7
hg38.chr17_GL000258v2_alt	1821992	hg38	0.9616	1.0000	0.0000	1.0000	1751990	1751990	21	21
hg38.chr17_GL000258v2_alt	1821992	hs1	0.9472	0.9958	0.0000	1.0000	1725810	1718593	8	8
hg38.chr17_GL383563v3_alt	375691	GCA_028858775.2	0.8091	0.9772	0.0079	0.9633	303968	297023	2971	2862
hg38.chr17_GL383563v3_alt	375691	GCA_028878055.2	0.6350	0.9380	0.0053	0.9505	238554	223765	1998	1899
hg38.chr17_GL383563v3_alt	375691	GCA_028885625.2	0.6823	0.9501	0.0048	0.9474	256335	243553	1787	1693
hg38.chr17_GL383563v3_alt	375691	GCA_028885655.2	0.6827	0.9501	0.0048	0.9466	256476	243667	1816	1719
hg38.chr17_GL383563v3_alt	375691	GCA_029281585.2	0.7760	0.9730	0.0068	0.9583	291535	283650	2541	2435
hg38.chr17_GL383563v3_alt	375691	GCA_029289425.2	0.8125	0.9779	0.0078	0.9670	305260	298518	2942	2845
hg38.chr17_GL383563v3_alt	375691	hg38	1.0000	1.0000	0.0105	1.0000	375691	375691	3933	3933
hg38.chr17_GL383563v3_alt	375691	hs1	0.8708	0.9947	0.0031	0.9349	327140	325391	1183	1106
hg38.chr17_GL383564v2_alt	133151	GCA_028858775.2	0.9976	0.9875	0.0000	0.0000	132837	131179	0	0
hg38.chr17_GL383564v2_alt	133151	GCA_028878055.2	0.9802	0.9618	0.0000	0.0000	130520	125540	0	0
hg38.chr17_GL383564v2_alt	133151	GCA_028885625.2	0.9924	0.9675	0.0000	0.0000	132145	127847	0	0
hg38.chr17_GL383564v2_alt	133151	GCA_028885655.2	0.9926	0.9674	0.0000	0.0000	132170	127867	0	0
hg38.chr17_GL383564v2_alt	133151	GCA_029281585.2	0.9974	0.9850	0.0000	0.0000	132799	130810	0	0
hg38.chr17_GL383564v2_alt	133151	GCA_029289425.2	0.9972	0.9874	0.0000	0.0000	132784	131110	0	0
hg38.chr17_GL383564v2_alt	133151	hg38	1.0000	1.0000	0.0000	0.0000	133151	133151	0	0
hg38.chr17_GL383564v2_alt	133151	hs1	0.9998	0.9996	0.0000	0.0000	133118	133061	0	0
hg38.chr17_GL383565v1_alt	223995	GCA_028858775.2	0.9421	0.9867	0.0000	0.0000	211027	208210	0	0
hg38.chr17_GL383565v1_alt	223995	GCA_028878055.2	0.9151	0.9608	0.0000	0.0000	204978	196949	0	0
hg38.chr17_GL383565v1_alt	223995	GCA_028885625.2	0.9301	0.9674	0.0000	0.0000	208342	201556	0	0
hg38.chr17_GL383565v1_alt	223995	GCA_028885655.2	0.9298	0.9675	0.0000	0.0000	208267	201497	0	0
hg38.chr17_GL383565v1_alt	223995	GCA_029281585.2	0.9396	0.9837	0.0000	0.0000	210468	207038	0	0
hg38.chr17_GL383565v1_alt	223995	GCA_029289425.2	0.9422	0.9867	0.0000	0.0000	211039	208234	0	0
hg38.chr17_GL383565v1_alt	223995	hg38	1.0000	1.0000	0.0000	0.0000	223995	223995	0	0
hg38.chr17_GL383565v1_alt	223995	hs1	0.9454	0.9991	0.0000	0.0000	211775	211586	0	0
hg38.chr17_GL383566v1_alt	90219	GCA_028858775.2	0.9777	0.9822	0.0000	0.0000	88210	86644	0	0
hg38.chr17_GL383566v1_alt	90219	GCA_028878055.2	0.9188	0.9450	0.0000	0.0000	82893	78333	0	0
hg38.chr17_GL383566v1_alt	90219	GCA_028885625.2	0.9441	0.9549	0.0000	0.0000	85178	81334	0	0
hg38.chr17_GL383566v1_alt	90219	GCA_028885655.2	0.9448	0.9552	0.0000	0.0000	85243	81424	0	0
hg38.chr17_GL383566v1_alt	90219	GCA_029281585.2	0.9837	0.9781	0.0000	0.0000	88752	86810	0	0
hg38.chr17_GL383566v1_alt	90219	GCA_029289425.2	0.9762	0.9827	0.0000	0.0000	88071	86545	0	0
hg38.chr17_GL383566v1_alt	90219	hg38	1.0000	1.0000	0.0000	0.0000	90219	90219	0	0
hg38.chr17_GL383566v1_alt	90219	hs1	0.9954	0.9984	0.0000	0.0000	89808	89667	0	0
hg38.chr17_JH159146v1_alt	278131	GCA_028858775.2	0.9893	0.9876	0.0000	0.0000	275144	271721	0	0
hg38.chr17_JH159146v1_alt	278131	GCA_028878055.2	0.9036	0.9595	0.0000	0.0000	251326	241136	0	0
hg38.chr17_JH159146v1_alt	278131	GCA_028885625.2	0.9450	0.9658	0.0000	0.0000	262837	253857	0	0
hg38.chr17_JH159146v1_alt	278131	GCA_028885655.2	0.9448	0.9658	0.0000	0.0000	262770	253794	0	0
hg38.chr17_JH159146v1_alt	278131	GCA_029281585.2	0.9918	0.9841	0.0000	0.0000	275843	271469	0	0
hg38.chr17_JH159146v1_alt	278131	GCA_029289425.2	0.9880	0.9873	0.0000	0.0000	274805	271303	0	0
hg38.chr17_JH159146v1_alt	278131	hg38	1.0000	1.0000	0.0000	0.0000	278131	278131	0	0
hg38.chr17_JH159146v1_alt	278131	hs1	0.9998	0.9995	0.0000	0.0000	278076	277943	0	0
hg38.chr17_JH159147v1_alt	70345	GCA_028858775.2	0.7387	0.9691	0.0842	0.9755	51962	50355	5926	5781
hg38.chr17_JH159147v1_alt	70345	GCA_028878055.2	0.8404	0.9478	0.0254	0.9412	59119	56031	1787	1682
hg38.chr17_JH159147v1_alt	70345	GCA_028885625.2	0.8407	0.9556	0.0254	0.9603	59141	56515	1790	1719
hg38.chr17_JH159147v1_alt	70345	GCA_028885655.2	0.8407	0.9546	0.0771	0.9053	59136	56453	5427	4913
hg38.chr17_JH159147v1_alt	70345	GCA_029281585.2	0.7931	0.9670	0.0845	0.9776	55789	53946	5945	5812
hg38.chr17_JH159147v1_alt	70345	GCA_029289425.2	0.7666	0.9727	0.0345	0.9798	53923	52449	2428	2379
hg38.chr17_JH159147v1_alt	70345	hg38	1.0000	1.0000	0.0884	1.0000	70345	70345	6218	6218
hg38.chr17_JH159147v1_alt	70345	hs1	0.9997	0.9994	0.0884	1.0000	70326	70286	6218	6218
hg38.chr17_JH159148v1_alt	88070	GCA_028858775.2	0.6127	0.9521	0.0000	0.0000	53957	51374	0	0
hg38.chr17_JH159148v1_alt	88070	GCA_028878055.2	0.7323	0.9342	0.0000	0.0000	64494	60253	0	0
hg38.chr17_JH159148v1_alt	88070	GCA_028885625.2	0.8968	0.9512	0.0000	0.0000	78984	75127	0	0
hg38.chr17_JH159148v1_alt	88070	GCA_028885655.2	0.8969	0.9508	0.0000	0.0000	78994	75105	0	0
hg38.chr17_JH159148v1_alt	88070	GCA_029281585.2	0.8339	0.9611	0.0000	0.0000	73440	70585	0	0
hg38.chr17_JH159148v1_alt	88070	GCA_029289425.2	0.6342	0.9550	0.0000	0.0000	55851	53335	0	0
hg38.chr17_JH159148v1_alt	88070	hg38	1.0000	1.0000	0.0000	0.0000	88070	88070	0	0
hg38.chr17_JH159148v1_alt	88070	hs1	0.9351	0.9855	0.0000	0.0000	82351	81155	0	0
hg38.chr17_KI270729v1_random	280839	GCA_028858775.2	0.3385	0.9029	0.0076	0.7914	95058	85827	2124	1681
hg38.chr17_KI270729v1_random	280839	GCA_028878055.2	0.0416	0.9444	0.0000	0.0000	11685	11035	0	0
hg38.chr17_KI270729v1_random	280839	GCA_028885625.2	0.0643	0.9487	0.0000	0.0000	18071	17144	0	0
hg38.chr17_KI270729v1_random	280839	GCA_028885655.2	0.0645	0.9506	0.0000	0.0000	18117	17222	0	0
hg38.chr17_KI270729v1_random	280839	GCA_029281585.2	0.2609	0.9386	0.0041	0.8428	73261	68762	1145	965
hg38.chr17_KI270729v1_random	280839	GCA_029289425.2	0.3409	0.9055	0.0076	0.8000	95739	86689	2135	1708
hg38.chr17_KI270729v1_random	280839	hg38	0.8285	1.0000	0.1801	1.0000	232673	232673	50578	50578
hg38.chr17_KI270729v1_random	280839	hs1	0.7670	0.9674	0.1373	0.9374	215391	208367	38548	36134
hg38.chr17_KI270730v1_random	112551	GCA_028858775.2	0.6348	0.7930	0.0511	0.7114	71453	56661	5751	4091
hg38.chr17_KI270730v1_random	112551	GCA_028878055.2	0.0277	0.8943	0.0000	0.0000	3113	2784	0	0
hg38.chr17_KI270730v1_random	112551	GCA_028885625.2	0.0523	0.9494	0.0000	0.0000	5891	5593	0	0
hg38.chr17_KI270730v1_random	112551	GCA_028885655.2	0.0524	0.9566	0.0000	0.0000	5893	5637	0	0
hg38.chr17_KI270730v1_random	112551	GCA_029281585.2	0.0992	0.9050	0.0000	0.0000	11169	10108	0	0
hg38.chr17_KI270730v1_random	112551	GCA_029289425.2	0.6074	0.8009	0.0461	0.7189	68368	54758	5183	3726
hg38.chr17_KI270730v1_random	112551	hg38	0.9470	1.0000	0.0982	1.0000	106582	106582	11057	11057
hg38.chr17_KI270730v1_random	112551	hs1	0.8948	0.9672	0.0713	0.9589	100714	97414	8024	7694
hg38.chr17_KI270857v1_alt	2877074	GCA_028858775.2	0.9669	0.9887	0.0014	0.9696	2781897	2750593	3977	3856
hg38.chr17_KI270857v1_alt	2877074	GCA_028878055.2	0.9002	0.9623	0.0010	0.9223	2589817	2492087	2998	2765
hg38.chr17_KI270857v1_alt	2877074	GCA_028885625.2	0.9438	0.9691	0.0009	0.9555	2715282	2631292	2609	2493
hg38.chr17_KI270857v1_alt	2877074	GCA_028885655.2	0.9437	0.9689	0.0009	0.9544	2715142	2630724	2610	2491
hg38.chr17_KI270857v1_alt	2877074	GCA_029281585.2	0.9601	0.9865	0.0014	0.9733	2762339	2725132	3967	3861
hg38.chr17_KI270857v1_alt	2877074	GCA_029289425.2	0.9672	0.9888	0.0014	0.9699	2782710	2751599	3982	3862
hg38.chr17_KI270857v1_alt	2877074	hg38	1.0000	1.0000	0.0014	1.0000	2877074	2877074	4123	4123
hg38.chr17_KI270857v1_alt	2877074	hs1	0.9938	0.9991	0.0014	0.9995	2859310	2856711	3908	3906
hg38.chr17_KI270858v1_alt	235827	GCA_028858775.2	0.9694	0.9860	0.0023	0.9836	228609	225415	549	540
hg38.chr17_KI270858v1_alt	235827	GCA_028878055.2	0.9452	0.9547	0.0023	0.9598	222914	212826	547	525
hg38.chr17_KI270858v1_alt	235827	GCA_028885625.2	0.9707	0.9647	0.0023	0.9818	228913	220840	548	538
hg38.chr17_KI270858v1_alt	235827	GCA_028885655.2	0.9699	0.9648	0.0023	0.9836	228727	220676	548	539
hg38.chr17_KI270858v1_alt	235827	GCA_029281585.2	0.9796	0.9815	0.0023	0.9799	231012	226744	546	535
hg38.chr17_KI270858v1_alt	235827	GCA_029289425.2	0.9577	0.9859	0.0023	0.9872	225863	222674	549	542
hg38.chr17_KI270858v1_alt	235827	hg38	1.0000	1.0000	0.0023	1.0000	235827	235827	549	549
hg38.chr17_KI270858v1_alt	235827	hs1	0.9942	0.9990	0.0000	0.0000	234470	234225	0	0
hg38.chr17_KI270859v1_alt	108763	GCA_028858775.2	0.9862	0.9833	0.0491	0.9790	107261	105470	5340	5228
hg38.chr17_KI270859v1_alt	108763	GCA_028878055.2	0.9755	0.9526	0.0482	0.9456	106096	101066	5238	4953
hg38.chr17_KI270859v1_alt	108763	GCA_028885625.2	0.9421	0.9590	0.0434	0.9561	102467	98262	4715	4508
hg38.chr17_KI270859v1_alt	108763	GCA_028885655.2	0.9418	0.9591	0.0434	0.9555	102428	98239	4716	4506
hg38.chr17_KI270859v1_alt	108763	GCA_029281585.2	0.9874	0.9806	0.0432	0.9802	107394	105313	4697	4604
hg38.chr17_KI270859v1_alt	108763	GCA_029289425.2	0.9912	0.9833	0.0491	0.9796	107809	106012	5341	5232
hg38.chr17_KI270859v1_alt	108763	hg38	1.0000	1.0000	0.0495	1.0000	108763	108763	5379	5379
hg38.chr17_KI270859v1_alt	108763	hs1	0.9991	0.9982	0.0494	0.9993	108660	108459	5376	5372
hg38.chr17_KI270860v1_alt	178921	GCA_028858775.2	0.9123	0.9791	0.0002	0.9062	163233	159817	32	29
hg38.chr17_KI270860v1_alt	178921	GCA_028878055.2	0.8188	0.9402	0.0002	0.9545	146495	137731	44	42
hg38.chr17_KI270860v1_alt	178921	GCA_028885625.2	0.8282	0.9492	0.0016	0.9007	148177	140655	282	254
hg38.chr17_KI270860v1_alt	178921	GCA_028885655.2	0.8303	0.9492	0.0012	0.8972	148561	141013	214	192
hg38.chr17_KI270860v1_alt	178921	GCA_029281585.2	0.8986	0.9726	0.0024	0.8949	160783	156385	428	383
hg38.chr17_KI270860v1_alt	178921	GCA_029289425.2	0.9023	0.9784	0.0025	0.9148	161439	157944	446	408
hg38.chr17_KI270860v1_alt	178921	hg38	1.0000	1.0000	0.0119	1.0000	178921	178921	2134	2134
hg38.chr17_KI270860v1_alt	178921	hs1	0.9951	0.9987	0.0103	0.9837	178036	177796	1843	1813
hg38.chr17_KI270861v1_alt	196688	GCA_028858775.2	0.9701	0.9834	0.0000	0.0000	190811	187634	0	0
hg38.chr17_KI270861v1_alt	196688	GCA_028878055.2	0.9066	0.9509	0.0000	0.0000	178325	169569	0	0
hg38.chr17_KI270861v1_alt	196688	GCA_028885625.2	0.9494	0.9573	0.0000	0.0000	186740	178774	0	0
hg38.chr17_KI270861v1_alt	196688	GCA_028885655.2	0.9488	0.9572	0.0000	0.0000	186613	178624	0	0
hg38.chr17_KI270861v1_alt	196688	GCA_029281585.2	0.9504	0.9786	0.0000	0.0000	186925	182934	0	0
hg38.chr17_KI270861v1_alt	196688	GCA_029289425.2	0.9714	0.9833	0.0000	0.0000	191055	187871	0	0
hg38.chr17_KI270861v1_alt	196688	hg38	1.0000	1.0000	0.0000	0.0000	196688	196688	0	0
hg38.chr17_KI270861v1_alt	196688	hs1	0.9906	0.9983	0.0000	0.0000	194842	194509	0	0
hg38.chr17_KI270862v1_alt	391357	GCA_028858775.2	0.9320	0.9793	0.0009	0.8546	364732	357188	337	288
hg38.chr17_KI270862v1_alt	391357	GCA_028878055.2	0.8564	0.9428	0.0007	0.8510	335166	316000	255	217
hg38.chr17_KI270862v1_alt	391357	GCA_028885625.2	0.8949	0.9517	0.0006	0.8517	350226	333312	236	201
hg38.chr17_KI270862v1_alt	391357	GCA_028885655.2	0.8963	0.9517	0.0005	0.8451	350784	333839	213	180
hg38.chr17_KI270862v1_alt	391357	GCA_029281585.2	0.9211	0.9750	0.0004	0.8944	360494	351486	161	144
hg38.chr17_KI270862v1_alt	391357	GCA_029289425.2	0.9338	0.9793	0.0009	0.8702	365455	357881	339	295
hg38.chr17_KI270862v1_alt	391357	hg38	1.0000	1.0000	0.0026	1.0000	391357	391357	1013	1013
hg38.chr17_KI270862v1_alt	391357	hs1	0.9674	0.9984	0.0026	0.9712	378580	377979	1008	979
hg38.chr17_KI270907v1_alt	137721	GCA_028858775.2	0.8939	0.9718	0.0044	0.9313	123106	119634	611	569
hg38.chr17_KI270907v1_alt	137721	GCA_028878055.2	0.7571	0.9356	0.0002	0.9697	104269	97559	33	32
hg38.chr17_KI270907v1_alt	137721	GCA_028885625.2	0.8284	0.9458	0.0007	0.9111	114093	107908	90	82
hg38.chr17_KI270907v1_alt	137721	GCA_028885655.2	0.8261	0.9461	0.0001	0.8947	113771	107638	19	17
hg38.chr17_KI270907v1_alt	137721	GCA_029281585.2	0.8912	0.9684	0.0033	0.9055	122739	118856	455	412
hg38.chr17_KI270907v1_alt	137721	GCA_029289425.2	0.9023	0.9725	0.0044	0.9337	124269	120852	603	563
hg38.chr17_KI270907v1_alt	137721	hg38	1.0000	1.0000	0.0056	1.0000	137721	137721	777	777
hg38.chr17_KI270907v1_alt	137721	hs1	0.9211	0.9952	0.0038	0.9642	126859	126244	530	511
hg38.chr17_KI270908v1_alt	1423190	GCA_028858775.2	0.9708	0.9883	0.0000	0.0000	1381633	1365414	0	0
hg38.chr17_KI270908v1_alt	1423190	GCA_028878055.2	0.9130	0.9625	0.0000	0.0000	1299395	1250641	0	0
hg38.chr17_KI270908v1_alt	1423190	GCA_028885625.2	0.9498	0.9672	0.0000	0.0000	1351678	1307324	0	0
hg38.chr17_KI270908v1_alt	1423190	GCA_028885655.2	0.9496	0.9672	0.0000	0.0000	1351456	1307095	0	0
hg38.chr17_KI270908v1_alt	1423190	GCA_029281585.2	0.9690	0.9886	0.0000	0.0000	1379036	1363300	0	0
hg38.chr17_KI270908v1_alt	1423190	GCA_029289425.2	0.9668	0.9883	0.0000	0.0000	1375954	1359795	0	0
hg38.chr17_KI270908v1_alt	1423190	hg38	1.0000	1.0000	0.0000	1.0000	1423190	1423190	29	29
hg38.chr17_KI270908v1_alt	1423190	hs1	0.9980	0.9993	0.0000	1.0000	1420275	1419219	1	1
hg38.chr17_KI270909v1_alt	325800	GCA_028858775.2	0.8824	0.9868	0.0000	0.0000	287474	283674	0	0
hg38.chr17_KI270909v1_alt	325800	GCA_028878055.2	0.7356	0.9588	0.0000	0.0000	239658	229795	0	0
hg38.chr17_KI270909v1_alt	325800	GCA_028885625.2	0.8500	0.9701	0.0000	0.0000	276939	268660	0	0
hg38.chr17_KI270909v1_alt	325800	GCA_028885655.2	0.8471	0.9689	0.0000	0.0000	275988	267396	0	0
hg38.chr17_KI270909v1_alt	325800	GCA_029281585.2	0.8809	0.9859	0.0000	0.0000	286997	282945	0	0
hg38.chr17_KI270909v1_alt	325800	GCA_029289425.2	0.8829	0.9870	0.0000	0.0000	287634	283903	0	0
hg38.chr17_KI270909v1_alt	325800	hg38	1.0000	1.0000	0.0000	1.0000	325800	325800	11	11
hg38.chr17_KI270909v1_alt	325800	hs1	0.9994	0.9993	0.0000	1.0000	325619	325404	11	11
hg38.chr17_KI270910v1_alt	157099	GCA_028858775.2	0.9544	0.9807	0.0000	0.0000	149930	147037	0	0
hg38.chr17_KI270910v1_alt	157099	GCA_028878055.2	0.8895	0.9433	0.0000	0.0000	139743	131816	0	0
hg38.chr17_KI270910v1_alt	157099	GCA_028885625.2	0.9011	0.9519	0.0000	0.0000	141565	134754	0	0
hg38.chr17_KI270910v1_alt	157099	GCA_028885655.2	0.9023	0.9519	0.0000	0.0000	141745	134932	0	0
hg38.chr17_KI270910v1_alt	157099	GCA_029281585.2	0.9431	0.9752	0.0000	0.0000	148157	144479	0	0
hg38.chr17_KI270910v1_alt	157099	GCA_029289425.2	0.9566	0.9806	0.0000	0.0000	150280	147361	0	0
hg38.chr17_KI270910v1_alt	157099	hg38	1.0000	1.0000	0.0000	0.0000	157099	157099	0	0
hg38.chr17_KI270910v1_alt	157099	hs1	0.9652	0.9986	0.0000	0.0000	151625	151412	0	0
hg38.chr18	80373285	GCA_028858775.2	0.9122	0.9867	0.8747	0.9867	73314615	72340116	70301776	69368749
hg38.chr18	80373285	GCA_028878055.2	0.8619	0.9611	0.8267	0.9613	69270663	66573303	66443148	63872695
hg38.chr18	80373285	GCA_028885625.2	0.8902	0.9663	0.8540	0.9664	71551738	69142154	68642189	66338077
hg38.chr18	80373285	GCA_028885655.2	0.8896	0.9663	0.8530	0.9664	71503111	69094333	68556654	66255771
hg38.chr18	80373285	GCA_029281585.2	0.9090	0.9832	0.8721	0.9833	73059966	71832589	70090576	68916845
hg38.chr18	80373285	GCA_029289425.2	0.9120	0.9866	0.8698	0.9867	73302033	72321876	69909285	68981863
hg38.chr18	80373285	hg38	0.9524	1.0000	0.9166	1.0000	76545037	76545037	73673297	73673297
hg38.chr18	80373285	hs1	0.9415	0.9982	0.9048	0.9982	75669349	75531580	72723250	72588810
hg38.chr18_GL383567v1_alt	289831	GCA_028858775.2	0.9379	0.9875	0.0088	0.9738	271820	268414	2555	2488
hg38.chr18_GL383567v1_alt	289831	GCA_028878055.2	0.8423	0.9628	0.0088	0.9511	244124	235043	2555	2430
hg38.chr18_GL383567v1_alt	289831	GCA_028885625.2	0.9357	0.9679	0.0088	0.9487	271206	262488	2552	2421
hg38.chr18_GL383567v1_alt	289831	GCA_028885655.2	0.9357	0.9677	0.0088	0.9483	271183	262427	2552	2420
hg38.chr18_GL383567v1_alt	289831	GCA_029281585.2	0.9354	0.9837	0.0088	0.9753	271112	266698	2555	2492
hg38.chr18_GL383567v1_alt	289831	GCA_029289425.2	0.9380	0.9875	0.0088	0.9753	271870	268477	2555	2492
hg38.chr18_GL383567v1_alt	289831	hg38	1.0000	1.0000	0.0088	1.0000	289831	289831	2559	2559
hg38.chr18_GL383567v1_alt	289831	hs1	0.9672	0.9987	0.0000	0.0000	280316	279960	0	0
hg38.chr18_GL383568v1_alt	104552	GCA_028858775.2	0.8615	0.9842	0.0648	0.9846	90075	88651	6770	6666
hg38.chr18_GL383568v1_alt	104552	GCA_028878055.2	0.7186	0.9556	0.0328	0.9510	75134	71798	3430	3262
hg38.chr18_GL383568v1_alt	104552	GCA_028885625.2	0.8585	0.9588	0.0643	0.9543	89760	86064	6724	6417
hg38.chr18_GL383568v1_alt	104552	GCA_028885655.2	0.8585	0.9591	0.0643	0.9540	89761	86087	6724	6415
hg38.chr18_GL383568v1_alt	104552	GCA_029281585.2	0.8554	0.9801	0.0626	0.9789	89435	87659	6544	6406
hg38.chr18_GL383568v1_alt	104552	GCA_029289425.2	0.8614	0.9835	0.0648	0.9852	90062	88573	6772	6672
hg38.chr18_GL383568v1_alt	104552	hg38	1.0000	1.0000	0.0649	1.0000	104552	104552	6790	6790
hg38.chr18_GL383568v1_alt	104552	hs1	0.9345	0.9963	0.0000	0.0000	97699	97337	0	0
hg38.chr18_GL383569v1_alt	167950	GCA_028858775.2	0.9100	0.9782	0.0046	0.9243	152834	149501	779	720
hg38.chr18_GL383569v1_alt	167950	GCA_028878055.2	0.8161	0.9422	0.0001	1.0000	137071	129149	14	14
hg38.chr18_GL383569v1_alt	167950	GCA_028885625.2	0.8734	0.9486	0.0021	0.8852	146690	139145	357	316
hg38.chr18_GL383569v1_alt	167950	GCA_028885655.2	0.8739	0.9489	0.0021	0.8852	146773	139278	357	316
hg38.chr18_GL383569v1_alt	167950	GCA_029281585.2	0.8713	0.9729	0.0020	0.9443	146331	142363	341	322
hg38.chr18_GL383569v1_alt	167950	GCA_029289425.2	0.9014	0.9788	0.0046	0.9397	151383	148177	779	732
hg38.chr18_GL383569v1_alt	167950	hg38	1.0000	1.0000	0.0049	1.0000	167950	167950	826	826
hg38.chr18_GL383569v1_alt	167950	hs1	0.9360	0.9973	0.0016	0.9275	157198	156779	262	243
hg38.chr18_GL383570v1_alt	164789	GCA_028858775.2	0.9174	0.9870	0.0000	0.0000	151182	149212	0	0
hg38.chr18_GL383570v1_alt	164789	GCA_028878055.2	0.8555	0.9594	0.0000	0.0000	140974	135253	0	0
hg38.chr18_GL383570v1_alt	164789	GCA_028885625.2	0.8569	0.9653	0.0000	0.0000	141201	136304	0	0
hg38.chr18_GL383570v1_alt	164789	GCA_028885655.2	0.8568	0.9653	0.0000	0.0000	141187	136292	0	0
hg38.chr18_GL383570v1_alt	164789	GCA_029281585.2	0.9042	0.9810	0.0000	0.0000	148995	146168	0	0
hg38.chr18_GL383570v1_alt	164789	GCA_029289425.2	0.9095	0.9868	0.0000	0.0000	149879	147900	0	0
hg38.chr18_GL383570v1_alt	164789	hg38	1.0000	1.0000	0.0000	0.0000	164789	164789	0	0
hg38.chr18_GL383570v1_alt	164789	hs1	0.9571	0.9995	0.0000	0.0000	157718	157634	0	0
hg38.chr18_GL383571v1_alt	198278	GCA_028858775.2	0.6778	0.9849	0.1785	0.9765	134396	132373	35392	34561
hg38.chr18_GL383571v1_alt	198278	GCA_028878055.2	0.6633	0.9615	0.1714	0.9568	131508	126445	33980	32513
hg38.chr18_GL383571v1_alt	198278	GCA_028885625.2	0.6568	0.9664	0.1705	0.9616	130223	125850	33804	32506
hg38.chr18_GL383571v1_alt	198278	GCA_028885655.2	0.6567	0.9665	0.1704	0.9617	130202	125843	33796	32501
hg38.chr18_GL383571v1_alt	198278	GCA_029281585.2	0.6766	0.9831	0.1817	0.9800	134148	131877	36023	35304
hg38.chr18_GL383571v1_alt	198278	GCA_029289425.2	0.6790	0.9850	0.1787	0.9764	134625	132604	35441	34603
hg38.chr18_GL383571v1_alt	198278	hg38	0.6835	1.0000	0.1847	1.0000	135515	135515	36628	36628
hg38.chr18_GL383571v1_alt	198278	hs1	0.6831	0.9987	0.1847	0.9974	135451	135271	36613	36517
hg38.chr18_GL383572v1_alt	159547	GCA_028858775.2	0.9139	0.9833	0.0006	0.9608	145813	143380	102	98
hg38.chr18_GL383572v1_alt	159547	GCA_028878055.2	0.7872	0.9552	0.0007	0.9009	125601	119980	111	100
hg38.chr18_GL383572v1_alt	159547	GCA_028885625.2	0.8845	0.9622	0.0017	0.9245	141124	135785	265	245
hg38.chr18_GL383572v1_alt	159547	GCA_028885655.2	0.8871	0.9620	0.0017	0.9245	141533	136158	265	245
hg38.chr18_GL383572v1_alt	159547	GCA_029281585.2	0.8399	0.9778	0.0166	0.9232	134002	131026	2656	2452
hg38.chr18_GL383572v1_alt	159547	GCA_029289425.2	0.9146	0.9832	0.0039	0.9302	145922	143472	630	586
hg38.chr18_GL383572v1_alt	159547	hg38	1.0000	1.0000	0.0355	1.0000	159547	159547	5657	5657
hg38.chr18_GL383572v1_alt	159547	hs1	0.9792	0.9956	0.0353	0.9492	156227	155542	5627	5341
hg38.chr18_KI270863v1_alt	167999	GCA_028858775.2	0.9649	0.9816	0.0063	0.9709	162095	159107	1066	1035
hg38.chr18_KI270863v1_alt	167999	GCA_028878055.2	0.8565	0.9424	0.0043	0.9777	143887	135600	718	702
hg38.chr18_KI270863v1_alt	167999	GCA_028885625.2	0.8921	0.9498	0.0015	0.9569	149874	142355	255	244
hg38.chr18_KI270863v1_alt	167999	GCA_028885655.2	0.8942	0.9496	0.0043	0.9692	150227	142658	714	692
hg38.chr18_KI270863v1_alt	167999	GCA_029281585.2	0.9611	0.9728	0.0091	0.9569	161465	157076	1531	1465
hg38.chr18_KI270863v1_alt	167999	GCA_029289425.2	0.9683	0.9818	0.0048	0.9442	162672	159717	806	761
hg38.chr18_KI270863v1_alt	167999	hg38	1.0000	1.0000	0.0202	1.0000	167999	167999	3396	3396
hg38.chr18_KI270863v1_alt	167999	hs1	0.9902	0.9970	0.0002	0.9310	166358	165859	29	27
hg38.chr18_KI270864v1_alt	111737	GCA_028858775.2	0.9607	0.9842	0.0304	0.9800	107345	105645	3393	3325
hg38.chr18_KI270864v1_alt	111737	GCA_028878055.2	0.8759	0.9617	0.0302	0.9547	97876	94124	3379	3226
hg38.chr18_KI270864v1_alt	111737	GCA_028885625.2	0.8696	0.9669	0.0301	0.9563	97165	93950	3366	3219
hg38.chr18_KI270864v1_alt	111737	GCA_028885655.2	0.8694	0.9669	0.0300	0.9571	97146	93932	3356	3212
hg38.chr18_KI270864v1_alt	111737	GCA_029281585.2	0.8244	0.9821	0.0300	0.9830	92115	90466	3352	3295
hg38.chr18_KI270864v1_alt	111737	GCA_029289425.2	0.9339	0.9842	0.0304	0.9797	104352	102707	3397	3328
hg38.chr18_KI270864v1_alt	111737	hg38	1.0000	1.0000	0.0403	1.0000	111737	111737	4504	4504
hg38.chr18_KI270864v1_alt	111737	hs1	0.9528	0.9978	0.0000	0.0000	106462	106232	0	0
hg38.chr18_KI270911v1_alt	157710	GCA_028858775.2	0.9230	0.9831	0.0011	0.8876	145572	143117	169	150
hg38.chr18_KI270911v1_alt	157710	GCA_028878055.2	0.7967	0.9552	0.0003	0.8727	125644	120016	55	48
hg38.chr18_KI270911v1_alt	157710	GCA_028885625.2	0.8941	0.9620	0.0008	0.8722	141008	135643	133	116
hg38.chr18_KI270911v1_alt	157710	GCA_028885655.2	0.8966	0.9618	0.0008	0.8824	141401	136003	119	105
hg38.chr18_KI270911v1_alt	157710	GCA_029281585.2	0.8370	0.9788	0.0002	0.8286	132011	129209	35	29
hg38.chr18_KI270911v1_alt	157710	GCA_029289425.2	0.9233	0.9830	0.0012	0.8689	145621	143152	183	159
hg38.chr18_KI270911v1_alt	157710	hg38	1.0000	1.0000	0.0018	1.0000	157710	157710	284	284
hg38.chr18_KI270911v1_alt	157710	hs1	0.9681	0.9972	0.0018	0.9431	152681	152248	281	265
hg38.chr18_KI270912v1_alt	174061	GCA_028858775.2	0.9365	0.9785	0.0000	0.0000	163012	159504	0	0
hg38.chr18_KI270912v1_alt	174061	GCA_028878055.2	0.8238	0.9421	0.0000	0.0000	143398	135096	0	0
hg38.chr18_KI270912v1_alt	174061	GCA_028885625.2	0.8998	0.9485	0.0000	0.0000	156614	148552	0	0
hg38.chr18_KI270912v1_alt	174061	GCA_028885655.2	0.9005	0.9489	0.0000	0.0000	156744	148727	0	0
hg38.chr18_KI270912v1_alt	174061	GCA_029281585.2	0.9009	0.9728	0.0000	0.0000	156819	152557	0	0
hg38.chr18_KI270912v1_alt	174061	GCA_029289425.2	0.9207	0.9792	0.0000	0.0000	160266	156926	0	0
hg38.chr18_KI270912v1_alt	174061	hg38	1.0000	1.0000	0.0000	0.0000	174061	174061	0	0
hg38.chr18_KI270912v1_alt	174061	hs1	0.9736	0.9968	0.0000	0.0000	169459	168925	0	0
hg38.chr19	58617616	GCA_028858775.2	0.9142	0.9835	0.8245	0.9838	53590589	52704028	48332301	47549118
hg38.chr19	58617616	GCA_028878055.2	0.8123	0.9533	0.7235	0.9546	47614476	45391376	42407226	40483099
hg38.chr19	58617616	GCA_028885625.2	0.8764	0.9614	0.7792	0.9617	51374842	49389727	45673994	43926361
hg38.chr19	58617616	GCA_028885655.2	0.8748	0.9613	0.7824	0.9617	51280597	49294910	45862940	44105163
hg38.chr19	58617616	GCA_029281585.2	0.9021	0.9801	0.8090	0.9806	52877762	51823881	47419405	46500335
hg38.chr19	58617616	GCA_029289425.2	0.9164	0.9835	0.8248	0.9838	53718005	52834106	48349236	47567726
hg38.chr19	58617616	hg38	0.9772	1.0000	0.8878	1.0000	57281392	57281392	52037988	52037988
hg38.chr19	58617616	hs1	0.9671	0.9970	0.8743	0.9969	56691651	56523753	51250003	51090112
hg38.chr19_GL383573v1_alt	385657	GCA_028858775.2	0.8868	0.9716	0.0003	0.9752	342013	332293	121	118
hg38.chr19_GL383573v1_alt	385657	GCA_028878055.2	0.4207	0.9276	0.0000	1.0000	162238	150498	1	1
hg38.chr19_GL383573v1_alt	385657	GCA_028885625.2	0.6495	0.9441	0.0000	0.0000	250478	236465	1	0
hg38.chr19_GL383573v1_alt	385657	GCA_028885655.2	0.4861	0.9327	0.0000	0.0000	187468	174845	1	0
hg38.chr19_GL383573v1_alt	385657	GCA_029281585.2	0.8731	0.9664	0.0000	0.0000	336726	325404	0	0
hg38.chr19_GL383573v1_alt	385657	GCA_029289425.2	0.9068	0.9724	0.0003	0.9835	349703	340052	121	119
hg38.chr19_GL383573v1_alt	385657	hg38	1.0000	1.0000	0.0003	1.0000	385657	385657	122	122
hg38.chr19_GL383573v1_alt	385657	hs1	0.9914	0.9968	0.0000	1.0000	382339	381134	1	1
hg38.chr19_GL383574v1_alt	155864	GCA_028858775.2	0.9884	0.9883	0.0374	0.9849	154055	152253	5826	5738
hg38.chr19_GL383574v1_alt	155864	GCA_028878055.2	0.9205	0.9616	0.0186	0.9590	143475	137963	2905	2786
hg38.chr19_GL383574v1_alt	155864	GCA_028885625.2	0.9718	0.9686	0.0368	0.9606	151472	146716	5736	5510
hg38.chr19_GL383574v1_alt	155864	GCA_028885655.2	0.9713	0.9686	0.0388	0.9613	151395	146637	6053	5819
hg38.chr19_GL383574v1_alt	155864	GCA_029281585.2	0.9371	0.9858	0.0237	0.9773	146059	143978	3693	3609
hg38.chr19_GL383574v1_alt	155864	GCA_029289425.2	0.9884	0.9883	0.0374	0.9852	154062	152262	5829	5743
hg38.chr19_GL383574v1_alt	155864	hg38	1.0000	1.0000	0.0415	1.0000	155864	155864	6465	6465
hg38.chr19_GL383574v1_alt	155864	hs1	0.9971	0.9987	0.0415	0.9983	155407	155209	6462	6451
hg38.chr19_GL383575v2_alt	170222	GCA_028858775.2	0.6110	0.9805	0.0000	0.0000	104011	101980	0	0
hg38.chr19_GL383575v2_alt	170222	GCA_028878055.2	0.5567	0.9408	0.0000	0.0000	94759	89152	0	0
hg38.chr19_GL383575v2_alt	170222	GCA_028885625.2	0.7256	0.9578	0.0000	0.0000	123510	118303	0	0
hg38.chr19_GL383575v2_alt	170222	GCA_028885655.2	0.7244	0.9584	0.0000	0.0000	123310	118177	0	0
hg38.chr19_GL383575v2_alt	170222	GCA_029281585.2	0.8466	0.9830	0.0000	0.0000	144115	141671	0	0
hg38.chr19_GL383575v2_alt	170222	GCA_029289425.2	0.6109	0.9806	0.0000	0.0000	103986	101973	0	0
hg38.chr19_GL383575v2_alt	170222	hg38	1.0000	1.0000	0.0000	0.0000	170222	170222	0	0
hg38.chr19_GL383575v2_alt	170222	hs1	0.9165	0.9982	0.0000	0.0000	156011	155723	0	0
hg38.chr19_GL383576v1_alt	188024	GCA_028858775.2	0.9183	0.9871	0.0000	0.0000	172665	170432	0	0
hg38.chr19_GL383576v1_alt	188024	GCA_028878055.2	0.6742	0.9494	0.0000	0.0000	126760	120350	0	0
hg38.chr19_GL383576v1_alt	188024	GCA_028885625.2	0.7780	0.9613	0.0000	0.0000	146274	140612	0	0
hg38.chr19_GL383576v1_alt	188024	GCA_028885655.2	0.7780	0.9610	0.0000	0.0000	146281	140583	0	0
hg38.chr19_GL383576v1_alt	188024	GCA_029281585.2	0.9277	0.9818	0.0000	0.0000	174421	171253	0	0
hg38.chr19_GL383576v1_alt	188024	GCA_029289425.2	0.9130	0.9869	0.0000	0.0000	171672	169419	0	0
hg38.chr19_GL383576v1_alt	188024	hg38	1.0000	1.0000	0.0000	0.0000	188024	188024	0	0
hg38.chr19_GL383576v1_alt	188024	hs1	0.9373	0.9992	0.0000	0.0000	176240	176103	0	0
hg38.chr19_GL949746v1_alt	987716	GCA_028858775.2	0.8058	0.9793	0.0001	0.9000	795888	779440	140	126
hg38.chr19_GL949746v1_alt	987716	GCA_028878055.2	0.6275	0.9434	0.0001	0.7867	619789	584684	75	59
hg38.chr19_GL949746v1_alt	987716	GCA_028885625.2	0.7730	0.9553	0.0001	0.8485	763499	729343	66	56
hg38.chr19_GL949746v1_alt	987716	GCA_028885655.2	0.7747	0.9552	0.0001	0.8493	765143	730893	73	62
hg38.chr19_GL949746v1_alt	987716	GCA_029281585.2	0.8045	0.9750	0.0001	0.9091	794573	774699	99	90
hg38.chr19_GL949746v1_alt	987716	GCA_029289425.2	0.8113	0.9794	0.0002	0.8736	801343	784858	174	152
hg38.chr19_GL949746v1_alt	987716	hg38	0.8936	1.0000	0.0002	1.0000	882633	882633	201	201
hg38.chr19_GL949746v1_alt	987716	hs1	0.8815	0.9977	0.0002	1.0000	870676	868646	201	201
hg38.chr19_GL949747v2_alt	729520	GCA_028858775.2	0.7020	0.9804	0.0000	0.0000	512088	502069	0	0
hg38.chr19_GL949747v2_alt	729520	GCA_028878055.2	0.6309	0.9445	0.0000	0.0000	460267	434725	0	0
hg38.chr19_GL949747v2_alt	729520	GCA_028885625.2	0.6948	0.9530	0.0000	0.0000	506866	483068	0	0
hg38.chr19_GL949747v2_alt	729520	GCA_028885655.2	0.6932	0.9531	0.0000	0.0000	505735	481993	0	0
hg38.chr19_GL949747v2_alt	729520	GCA_029281585.2	0.7255	0.9766	0.0000	0.0000	529268	516872	0	0
hg38.chr19_GL949747v2_alt	729520	GCA_029289425.2	0.7055	0.9803	0.0000	0.0000	514701	504571	0	0
hg38.chr19_GL949747v2_alt	729520	hg38	0.9095	1.0000	0.0000	0.0000	663520	663520	0	0
hg38.chr19_GL949747v2_alt	729520	hs1	0.8206	0.9947	0.0000	0.0000	598611	595412	0	0
hg38.chr19_GL949748v2_alt	1064304	GCA_028858775.2	0.3413	0.9817	0.0000	0.0000	363217	356573	0	0
hg38.chr19_GL949748v2_alt	1064304	GCA_028878055.2	0.3127	0.9475	0.0000	0.0000	332801	315337	0	0
hg38.chr19_GL949748v2_alt	1064304	GCA_028885625.2	0.3349	0.9544	0.0000	0.0000	356404	340137	0	0
hg38.chr19_GL949748v2_alt	1064304	GCA_028885655.2	0.3338	0.9544	0.0000	0.0000	355312	339099	0	0
hg38.chr19_GL949748v2_alt	1064304	GCA_029281585.2	0.3479	0.9772	0.0000	0.0000	370227	361803	0	0
hg38.chr19_GL949748v2_alt	1064304	GCA_029289425.2	0.3437	0.9815	0.0000	0.0000	365799	359023	0	0
hg38.chr19_GL949748v2_alt	1064304	hg38	0.4015	1.0000	0.0000	0.0000	427304	427304	0	0
hg38.chr19_GL949748v2_alt	1064304	hs1	0.3582	0.9981	0.0000	0.0000	381226	380483	0	0
hg38.chr19_GL949749v2_alt	1091841	GCA_028858775.2	0.3327	0.9817	0.0000	0.0000	363217	356573	0	0
hg38.chr19_GL949749v2_alt	1091841	GCA_028878055.2	0.3048	0.9475	0.0000	0.0000	332801	315337	0	0
hg38.chr19_GL949749v2_alt	1091841	GCA_028885625.2	0.3264	0.9544	0.0000	0.0000	356404	340137	0	0
hg38.chr19_GL949749v2_alt	1091841	GCA_028885655.2	0.3254	0.9544	0.0000	0.0000	355312	339099	0	0
hg38.chr19_GL949749v2_alt	1091841	GCA_029281585.2	0.3391	0.9772	0.0000	0.0000	370227	361803	0	0
hg38.chr19_GL949749v2_alt	1091841	GCA_029289425.2	0.3350	0.9815	0.0000	0.0000	365799	359023	0	0
hg38.chr19_GL949749v2_alt	1091841	hg38	0.3992	1.0000	0.0000	0.0000	435841	435841	0	0
hg38.chr19_GL949749v2_alt	1091841	hs1	0.3492	0.9981	0.0000	0.0000	381226	380483	0	0
hg38.chr19_GL949750v2_alt	1066390	GCA_028858775.2	0.3406	0.9817	0.0000	0.0000	363217	356573	0	0
hg38.chr19_GL949750v2_alt	1066390	GCA_028878055.2	0.3121	0.9475	0.0000	0.0000	332801	315337	0	0
hg38.chr19_GL949750v2_alt	1066390	GCA_028885625.2	0.3342	0.9544	0.0000	0.0000	356404	340137	0	0
hg38.chr19_GL949750v2_alt	1066390	GCA_028885655.2	0.3332	0.9544	0.0000	0.0000	355312	339099	0	0
hg38.chr19_GL949750v2_alt	1066390	GCA_029281585.2	0.3472	0.9772	0.0000	0.0000	370227	361803	0	0
hg38.chr19_GL949750v2_alt	1066390	GCA_029289425.2	0.3430	0.9815	0.0000	0.0000	365799	359023	0	0
hg38.chr19_GL949750v2_alt	1066390	hg38	0.3923	1.0000	0.0000	0.0000	418390	418390	0	0
hg38.chr19_GL949750v2_alt	1066390	hs1	0.3575	0.9981	0.0000	0.0000	381226	380483	0	0
hg38.chr19_GL949751v2_alt	1002683	GCA_028858775.2	0.3622	0.9817	0.0000	0.0000	363217	356573	0	0
hg38.chr19_GL949751v2_alt	1002683	GCA_028878055.2	0.3319	0.9475	0.0000	0.0000	332801	315337	0	0
hg38.chr19_GL949751v2_alt	1002683	GCA_028885625.2	0.3555	0.9544	0.0000	0.0000	356404	340137	0	0
hg38.chr19_GL949751v2_alt	1002683	GCA_028885655.2	0.3544	0.9544	0.0000	0.0000	355312	339099	0	0
hg38.chr19_GL949751v2_alt	1002683	GCA_029281585.2	0.3692	0.9772	0.0000	0.0000	370227	361803	0	0
hg38.chr19_GL949751v2_alt	1002683	GCA_029289425.2	0.3648	0.9815	0.0000	0.0000	365799	359023	0	0
hg38.chr19_GL949751v2_alt	1002683	hg38	0.4654	1.0000	0.0000	0.0000	466682	466682	0	0
hg38.chr19_GL949751v2_alt	1002683	hs1	0.3802	0.9981	0.0000	0.0000	381226	380483	0	0
hg38.chr19_GL949752v1_alt	987100	GCA_028858775.2	0.8295	0.9792	0.0000	1.0000	818847	801796	8	8
hg38.chr19_GL949752v1_alt	987100	GCA_028878055.2	0.6585	0.9436	0.0000	1.0000	650014	613365	8	8
hg38.chr19_GL949752v1_alt	987100	GCA_028885625.2	0.8003	0.9545	0.0000	0.0000	790025	754062	0	0
hg38.chr19_GL949752v1_alt	987100	GCA_028885655.2	0.8021	0.9545	0.0000	1.0000	791708	755675	8	8
hg38.chr19_GL949752v1_alt	987100	GCA_029281585.2	0.8316	0.9749	0.0000	1.0000	820855	800222	8	8
hg38.chr19_GL949752v1_alt	987100	GCA_029289425.2	0.8351	0.9792	0.0000	1.0000	824374	807266	8	8
hg38.chr19_GL949752v1_alt	987100	hg38	0.9947	1.0000	0.0000	1.0000	981897	981897	15	15
hg38.chr19_GL949752v1_alt	987100	hs1	0.9824	0.9978	0.0000	0.0000	969736	967642	0	0
hg38.chr19_GL949753v2_alt	796479	GCA_028858775.2	0.7553	0.9798	0.0000	0.0000	601545	589406	0	0
hg38.chr19_GL949753v2_alt	796479	GCA_028878055.2	0.5959	0.9421	0.0000	0.0000	474639	447148	0	0
hg38.chr19_GL949753v2_alt	796479	GCA_028885625.2	0.7291	0.9547	0.0000	0.0000	580729	554438	0	0
hg38.chr19_GL949753v2_alt	796479	GCA_028885655.2	0.7273	0.9546	0.0000	0.0000	579265	552974	0	0
hg38.chr19_GL949753v2_alt	796479	GCA_029281585.2	0.7598	0.9747	0.0000	0.0000	605156	589845	0	0
hg38.chr19_GL949753v2_alt	796479	GCA_029289425.2	0.7601	0.9798	0.0000	0.0000	605437	593236	0	0
hg38.chr19_GL949753v2_alt	796479	hg38	0.8415	1.0000	0.0000	0.0000	670231	670231	0	0
hg38.chr19_GL949753v2_alt	796479	hs1	0.8302	0.9984	0.0000	0.0000	661238	660162	0	0
hg38.chr19_KI270865v1_alt	52969	GCA_028858775.2	0.9369	0.9772	0.0163	0.9362	49625	48492	862	807
hg38.chr19_KI270865v1_alt	52969	GCA_028878055.2	0.8695	0.9389	0.0009	0.8400	46055	43243	50	42
hg38.chr19_KI270865v1_alt	52969	GCA_028885625.2	0.8547	0.9443	0.0000	0.0000	45275	42752	0	0
hg38.chr19_KI270865v1_alt	52969	GCA_028885655.2	0.8448	0.9427	0.0000	0.0000	44747	42181	0	0
hg38.chr19_KI270865v1_alt	52969	GCA_029281585.2	0.9441	0.9693	0.0106	0.9362	50009	48474	564	528
hg38.chr19_KI270865v1_alt	52969	GCA_029289425.2	0.9469	0.9768	0.0169	0.9307	50155	48991	895	833
hg38.chr19_KI270865v1_alt	52969	hg38	1.0000	1.0000	0.0202	1.0000	52969	52969	1070	1070
hg38.chr19_KI270865v1_alt	52969	hs1	0.9773	0.9984	0.0164	0.9482	51769	51684	868	823
hg38.chr19_KI270866v1_alt	43156	GCA_028858775.2	0.9636	0.9761	0.0323	0.9685	41583	40590	1396	1352
hg38.chr19_KI270866v1_alt	43156	GCA_028878055.2	0.9368	0.9540	0.0301	0.8667	40427	38569	1298	1125
hg38.chr19_KI270866v1_alt	43156	GCA_028885625.2	0.9471	0.9596	0.0282	0.8595	40871	39220	1217	1046
hg38.chr19_KI270866v1_alt	43156	GCA_028885655.2	0.9493	0.9598	0.0289	0.8646	40967	39320	1248	1079
hg38.chr19_KI270866v1_alt	43156	GCA_029281585.2	0.9598	0.9714	0.0304	0.7960	41420	40234	1314	1046
hg38.chr19_KI270866v1_alt	43156	GCA_029289425.2	0.9650	0.9753	0.0323	0.9678	41647	40618	1396	1351
hg38.chr19_KI270866v1_alt	43156	hg38	1.0000	1.0000	0.0605	1.0000	43156	43156	2612	2612
hg38.chr19_KI270866v1_alt	43156	hs1	0.9713	0.9954	0.0323	0.8918	41918	41725	1396	1245
hg38.chr19_KI270867v1_alt	233762	GCA_028858775.2	0.5616	0.9528	0.0000	0.0000	131282	125091	0	0
hg38.chr19_KI270867v1_alt	233762	GCA_028878055.2	0.4163	0.9129	0.0000	0.0000	97326	88849	0	0
hg38.chr19_KI270867v1_alt	233762	GCA_028885625.2	0.7397	0.9483	0.0000	0.0000	172920	163972	0	0
hg38.chr19_KI270867v1_alt	233762	GCA_028885655.2	0.7397	0.9489	0.0000	0.0000	172906	164066	0	0
hg38.chr19_KI270867v1_alt	233762	GCA_029281585.2	0.6374	0.9658	0.0000	0.0000	149009	143906	0	0
hg38.chr19_KI270867v1_alt	233762	GCA_029289425.2	0.5597	0.9495	0.0000	0.0000	130844	124238	0	0
hg38.chr19_KI270867v1_alt	233762	hg38	1.0000	1.0000	0.0000	0.0000	233762	233762	0	0
hg38.chr19_KI270867v1_alt	233762	hs1	0.9376	0.9988	0.0000	0.0000	219167	218909	0	0
hg38.chr19_KI270868v1_alt	61734	GCA_028858775.2	0.8922	0.9706	0.0000	0.0000	55081	53461	0	0
hg38.chr19_KI270868v1_alt	61734	GCA_028878055.2	0.8234	0.9269	0.0000	0.0000	50831	47115	0	0
hg38.chr19_KI270868v1_alt	61734	GCA_028885625.2	0.8316	0.9349	0.0000	0.0000	51337	47995	0	0
hg38.chr19_KI270868v1_alt	61734	GCA_028885655.2	0.8527	0.9350	0.0000	0.0000	52640	49220	0	0
hg38.chr19_KI270868v1_alt	61734	GCA_029281585.2	0.8353	0.9682	0.0000	0.0000	51569	49928	0	0
hg38.chr19_KI270868v1_alt	61734	GCA_029289425.2	0.8930	0.9706	0.0000	0.0000	55131	53509	0	0
hg38.chr19_KI270868v1_alt	61734	hg38	1.0000	1.0000	0.0029	1.0000	61734	61734	182	182
hg38.chr19_KI270868v1_alt	61734	hs1	0.9491	0.9947	0.0029	0.9503	58590	58277	181	172
hg38.chr19_KI270882v1_alt	248807	GCA_028858775.2	0.0292	0.9766	0.0000	0.0000	7268	7098	0	0
hg38.chr19_KI270882v1_alt	248807	GCA_028878055.2	0.0243	0.9471	0.0000	0.0000	6034	5715	0	0
hg38.chr19_KI270882v1_alt	248807	GCA_028885625.2	0.0243	0.9450	0.0000	0.0000	6035	5703	0	0
hg38.chr19_KI270882v1_alt	248807	GCA_028885655.2	0.0242	0.9479	0.0000	0.0000	6011	5698	0	0
hg38.chr19_KI270882v1_alt	248807	GCA_029281585.2	0.0274	0.9618	0.0000	0.0000	6811	6551	0	0
hg38.chr19_KI270882v1_alt	248807	GCA_029289425.2	0.0292	0.9762	0.0000	0.0000	7271	7098	0	0
hg38.chr19_KI270882v1_alt	248807	hg38	0.7489	1.0000	0.0000	0.0000	186342	186342	0	0
hg38.chr19_KI270882v1_alt	248807	hs1	0.2369	0.9626	0.0000	0.0000	58936	56734	0	0
hg38.chr19_KI270887v1_alt	209512	GCA_028858775.2	0.2065	0.9764	0.0000	1.0000	43266	42246	1	1
hg38.chr19_KI270887v1_alt	209512	GCA_028878055.2	0.1606	0.9438	0.0000	1.0000	33658	31765	1	1
hg38.chr19_KI270887v1_alt	209512	GCA_028885625.2	0.1981	0.9488	0.0000	1.0000	41496	39370	1	1
hg38.chr19_KI270887v1_alt	209512	GCA_028885655.2	0.1965	0.9493	0.0000	1.0000	41166	39079	1	1
hg38.chr19_KI270887v1_alt	209512	GCA_029281585.2	0.2038	0.9696	0.0000	1.0000	42704	41404	1	1
hg38.chr19_KI270887v1_alt	209512	GCA_029289425.2	0.2067	0.9761	0.0000	1.0000	43296	42260	1	1
hg38.chr19_KI270887v1_alt	209512	hg38	1.0000	1.0000	0.0000	1.0000	209512	209512	1	1
hg38.chr19_KI270887v1_alt	209512	hs1	0.4927	0.9770	0.0000	0.0000	103218	100842	0	0
hg38.chr19_KI270888v1_alt	155532	GCA_028858775.2	0.0036	0.8809	0.0000	0.0000	554	488	0	0
hg38.chr19_KI270888v1_alt	155532	GCA_028878055.2	0.0035	0.8670	0.0000	0.0000	549	476	0	0
hg38.chr19_KI270888v1_alt	155532	GCA_028885625.2	0.0036	0.8736	0.0000	0.0000	554	484	0	0
hg38.chr19_KI270888v1_alt	155532	GCA_028885655.2	0.0036	0.8736	0.0000	0.0000	554	484	0	0
hg38.chr19_KI270888v1_alt	155532	GCA_029281585.2	0.0036	0.8791	0.0000	0.0000	554	487	0	0
hg38.chr19_KI270888v1_alt	155532	GCA_029289425.2	0.0036	0.8791	0.0000	0.0000	554	487	0	0
hg38.chr19_KI270888v1_alt	155532	hg38	0.0744	1.0000	0.0000	0.0000	11576	11576	0	0
hg38.chr19_KI270888v1_alt	155532	hs1	0.0036	0.8827	0.0000	0.0000	554	489	0	0
hg38.chr19_KI270917v1_alt	190932	GCA_028858775.2	0.2229	0.9747	0.0000	0.0000	42554	41479	0	0
hg38.chr19_KI270917v1_alt	190932	GCA_028878055.2	0.1993	0.9439	0.0000	0.0000	38051	35916	0	0
hg38.chr19_KI270917v1_alt	190932	GCA_028885625.2	0.2118	0.9432	0.0000	0.0000	40448	38149	0	0
hg38.chr19_KI270917v1_alt	190932	GCA_028885655.2	0.2118	0.9437	0.0000	0.0000	40441	38166	0	0
hg38.chr19_KI270917v1_alt	190932	GCA_029281585.2	0.2429	0.9644	0.0000	0.0000	46378	44729	0	0
hg38.chr19_KI270917v1_alt	190932	GCA_029289425.2	0.2234	0.9743	0.0000	0.0000	42661	41566	0	0
hg38.chr19_KI270917v1_alt	190932	hg38	0.9844	1.0000	0.0000	0.0000	187945	187945	0	0
hg38.chr19_KI270917v1_alt	190932	hs1	0.7791	0.9979	0.0000	0.0000	148762	148443	0	0
hg38.chr19_KI270920v1_alt	198005	GCA_028858775.2	0.2124	0.9752	0.0000	0.0000	42064	41019	0	0
hg38.chr19_KI270920v1_alt	198005	GCA_028878055.2	0.1922	0.9439	0.0000	0.0000	38050	35915	0	0
hg38.chr19_KI270920v1_alt	198005	GCA_028885625.2	0.2026	0.9434	0.0000	0.0000	40109	37837	0	0
hg38.chr19_KI270920v1_alt	198005	GCA_028885655.2	0.2025	0.9442	0.0000	0.0000	40102	37865	0	0
hg38.chr19_KI270920v1_alt	198005	GCA_029281585.2	0.2169	0.9705	0.0000	0.0000	42951	41685	0	0
hg38.chr19_KI270920v1_alt	198005	GCA_029289425.2	0.2130	0.9747	0.0000	0.0000	42171	41103	0	0
hg38.chr19_KI270920v1_alt	198005	hg38	1.0000	1.0000	0.0000	0.0000	198005	198005	0	0
hg38.chr19_KI270920v1_alt	198005	hs1	0.4869	0.9987	0.0000	0.0000	96415	96290	0	0
hg38.chr19_KI270921v1_alt	282224	GCA_028858775.2	0.3017	0.9752	0.0000	0.0000	85154	83045	0	0
hg38.chr19_KI270921v1_alt	282224	GCA_028878055.2	0.2615	0.9382	0.0000	0.0000	73815	69251	0	0
hg38.chr19_KI270921v1_alt	282224	GCA_028885625.2	0.2913	0.9498	0.0000	0.0000	82218	78093	0	0
hg38.chr19_KI270921v1_alt	282224	GCA_028885655.2	0.2900	0.9491	0.0000	0.0000	81858	77690	0	0
hg38.chr19_KI270921v1_alt	282224	GCA_029281585.2	0.3048	0.9711	0.0000	0.0000	86011	83524	0	0
hg38.chr19_KI270921v1_alt	282224	GCA_029289425.2	0.3021	0.9763	0.0000	0.0000	85268	83246	0	0
hg38.chr19_KI270921v1_alt	282224	hg38	1.0000	1.0000	0.0000	0.0000	282224	282224	0	0
hg38.chr19_KI270921v1_alt	282224	hs1	0.5836	0.9862	0.0000	0.0000	164698	162420	0	0
hg38.chr19_KI270922v1_alt	187935	GCA_028858775.2	0.2264	0.9747	0.0000	0.0000	42554	41479	0	0
hg38.chr19_KI270922v1_alt	187935	GCA_028878055.2	0.2025	0.9439	0.0000	0.0000	38051	35916	0	0
hg38.chr19_KI270922v1_alt	187935	GCA_028885625.2	0.2152	0.9432	0.0000	0.0000	40448	38149	0	0
hg38.chr19_KI270922v1_alt	187935	GCA_028885655.2	0.2152	0.9437	0.0000	0.0000	40441	38166	0	0
hg38.chr19_KI270922v1_alt	187935	GCA_029281585.2	0.2468	0.9645	0.0000	0.0000	46378	44730	0	0
hg38.chr19_KI270922v1_alt	187935	GCA_029289425.2	0.2270	0.9743	0.0000	0.0000	42661	41566	0	0
hg38.chr19_KI270922v1_alt	187935	hg38	1.0000	1.0000	0.0000	0.0000	187935	187935	0	0
hg38.chr19_KI270922v1_alt	187935	hs1	0.7904	0.9973	0.0000	0.0000	148537	148133	0	0
hg38.chr19_KI270923v1_alt	189352	GCA_028858775.2	0.2222	0.9748	0.0000	0.0000	42068	41009	0	0
hg38.chr19_KI270923v1_alt	189352	GCA_028878055.2	0.2009	0.9439	0.0000	0.0000	38050	35915	0	0
hg38.chr19_KI270923v1_alt	189352	GCA_028885625.2	0.2118	0.9434	0.0000	0.0000	40109	37837	0	0
hg38.chr19_KI270923v1_alt	189352	GCA_028885655.2	0.2118	0.9442	0.0000	0.0000	40102	37865	0	0
hg38.chr19_KI270923v1_alt	189352	GCA_029281585.2	0.2268	0.9705	0.0000	0.0000	42951	41685	0	0
hg38.chr19_KI270923v1_alt	189352	GCA_029289425.2	0.2227	0.9743	0.0000	0.0000	42175	41092	0	0
hg38.chr19_KI270923v1_alt	189352	hg38	0.6630	1.0000	0.0000	0.0000	125534	125534	0	0
hg38.chr19_KI270923v1_alt	189352	hs1	0.6625	0.9979	0.0000	0.0000	125453	125195	0	0
hg38.chr19_KI270929v1_alt	186203	GCA_028858775.2	0.2259	0.9751	0.0000	0.0000	42068	41022	0	0
hg38.chr19_KI270929v1_alt	186203	GCA_028878055.2	0.2043	0.9439	0.0000	0.0000	38050	35915	0	0
hg38.chr19_KI270929v1_alt	186203	GCA_028885625.2	0.2154	0.9434	0.0000	0.0000	40109	37837	0	0
hg38.chr19_KI270929v1_alt	186203	GCA_028885655.2	0.2154	0.9442	0.0000	0.0000	40102	37865	0	0
hg38.chr19_KI270929v1_alt	186203	GCA_029281585.2	0.2421	0.9662	0.0000	0.0000	45082	43560	0	0
hg38.chr19_KI270929v1_alt	186203	GCA_029289425.2	0.2265	0.9747	0.0000	0.0000	42175	41106	0	0
hg38.chr19_KI270929v1_alt	186203	hg38	1.0000	1.0000	0.0000	0.0000	186203	186203	0	0
hg38.chr19_KI270929v1_alt	186203	hs1	0.7964	0.9983	0.0000	0.0000	148301	148044	0	0
hg38.chr19_KI270932v1_alt	215732	GCA_028858775.2	0.1415	0.9753	0.0000	0.0000	30536	29782	0	0
hg38.chr19_KI270932v1_alt	215732	GCA_028878055.2	0.1043	0.9413	0.0000	0.0000	22504	21182	0	0
hg38.chr19_KI270932v1_alt	215732	GCA_028885625.2	0.1392	0.9483	0.0000	0.0000	30023	28471	0	0
hg38.chr19_KI270932v1_alt	215732	GCA_028885655.2	0.1375	0.9480	0.0000	0.0000	29672	28130	0	0
hg38.chr19_KI270932v1_alt	215732	GCA_029281585.2	0.1411	0.9693	0.0000	0.0000	30437	29503	0	0
hg38.chr19_KI270932v1_alt	215732	GCA_029289425.2	0.1417	0.9749	0.0000	0.0000	30566	29798	0	0
hg38.chr19_KI270932v1_alt	215732	hg38	0.1897	1.0000	0.0000	0.0000	40933	40933	0	0
hg38.chr19_KI270932v1_alt	215732	hs1	0.1796	0.9971	0.0000	0.0000	38752	38640	0	0
hg38.chr19_KI270938v1_alt	1066800	GCA_028858775.2	0.8354	0.9791	0.0002	0.9852	891215	872567	203	200
hg38.chr19_KI270938v1_alt	1066800	GCA_028878055.2	0.6648	0.9429	0.0002	0.9409	709158	668652	203	191
hg38.chr19_KI270938v1_alt	1066800	GCA_028885625.2	0.8084	0.9545	0.0002	0.9803	862426	823145	203	199
hg38.chr19_KI270938v1_alt	1066800	GCA_028885655.2	0.8099	0.9544	0.0002	0.9901	864015	824644	203	201
hg38.chr19_KI270938v1_alt	1066800	GCA_029281585.2	0.8435	0.9749	0.0002	0.9852	899890	877344	203	200
hg38.chr19_KI270938v1_alt	1066800	GCA_029289425.2	0.8405	0.9792	0.0002	0.9852	896677	877990	203	200
hg38.chr19_KI270938v1_alt	1066800	hg38	1.0000	1.0000	0.0002	1.0000	1066800	1066800	203	203
hg38.chr19_KI270938v1_alt	1066800	hs1	0.9881	0.9978	0.0002	1.0000	1054078	1051773	203	203
hg38.chr1_GL383518v1_alt	182439	GCA_028858775.2	0.9880	0.9880	0.0000	0.0000	180245	178085	0	0
hg38.chr1_GL383518v1_alt	182439	GCA_028878055.2	0.9110	0.9584	0.0000	0.0000	166208	159294	0	0
hg38.chr1_GL383518v1_alt	182439	GCA_028885625.2	0.9816	0.9662	0.0000	0.0000	179090	173035	0	0
hg38.chr1_GL383518v1_alt	182439	GCA_028885655.2	0.9816	0.9661	0.0000	0.0000	179078	173015	0	0
hg38.chr1_GL383518v1_alt	182439	GCA_029281585.2	0.9824	0.9825	0.0000	0.0000	179233	176090	0	0
hg38.chr1_GL383518v1_alt	182439	GCA_029289425.2	0.9887	0.9879	0.0000	0.0000	180369	178193	0	0
hg38.chr1_GL383518v1_alt	182439	hg38	1.0000	1.0000	0.0000	0.0000	182439	182439	0	0
hg38.chr1_GL383518v1_alt	182439	hs1	0.9970	0.9965	0.0000	0.0000	181900	181271	0	0
hg38.chr1_GL383519v1_alt	110268	GCA_028858775.2	0.9824	0.9898	0.0000	0.0000	108324	107214	0	0
hg38.chr1_GL383519v1_alt	110268	GCA_028878055.2	0.9613	0.9652	0.0000	0.0000	106002	102313	0	0
hg38.chr1_GL383519v1_alt	110268	GCA_028885625.2	0.9640	0.9699	0.0000	0.0000	106293	103091	0	0
hg38.chr1_GL383519v1_alt	110268	GCA_028885655.2	0.9640	0.9698	0.0000	0.0000	106302	103095	0	0
hg38.chr1_GL383519v1_alt	110268	GCA_029281585.2	0.9717	0.9833	0.0000	0.0000	107147	105357	0	0
hg38.chr1_GL383519v1_alt	110268	GCA_029289425.2	0.9820	0.9897	0.0000	0.0000	108278	107164	0	0
hg38.chr1_GL383519v1_alt	110268	hg38	1.0000	1.0000	0.0000	0.0000	110268	110268	0	0
hg38.chr1_GL383519v1_alt	110268	hs1	0.9949	0.9996	0.0000	0.0000	109709	109664	0	0
hg38.chr1_GL383520v2_alt	366580	GCA_028858775.2	0.9715	0.9879	0.0076	0.9788	356138	351839	2781	2722
hg38.chr1_GL383520v2_alt	366580	GCA_028878055.2	0.9161	0.9635	0.0040	0.9604	335827	323572	1465	1407
hg38.chr1_GL383520v2_alt	366580	GCA_028885625.2	0.9651	0.9686	0.0075	0.9594	353794	342680	2734	2623
hg38.chr1_GL383520v2_alt	366580	GCA_028885655.2	0.9653	0.9686	0.0075	0.9598	353860	342763	2734	2624
hg38.chr1_GL383520v2_alt	366580	GCA_029281585.2	0.9709	0.9855	0.0076	0.9758	355902	350750	2769	2702
hg38.chr1_GL383520v2_alt	366580	GCA_029289425.2	0.9727	0.9877	0.0076	0.9809	356580	352200	2781	2728
hg38.chr1_GL383520v2_alt	366580	hg38	1.0000	1.0000	0.0080	1.0000	366580	366580	2929	2929
hg38.chr1_GL383520v2_alt	366580	hs1	0.9685	0.9997	0.0000	0.0000	355047	354926	0	0
hg38.chr1_KI270706v1_random	175055	GCA_028858775.2	0.8814	0.9830	0.0000	1.0000	154290	151664	2	2
hg38.chr1_KI270706v1_random	175055	GCA_028878055.2	0.4703	0.9475	0.0000	0.0000	82325	78001	0	0
hg38.chr1_KI270706v1_random	175055	GCA_028885625.2	0.5720	0.9543	0.0000	0.0000	100135	95554	0	0
hg38.chr1_KI270706v1_random	175055	GCA_028885655.2	0.5707	0.9528	0.0000	0.0000	99907	95188	0	0
hg38.chr1_KI270706v1_random	175055	GCA_029281585.2	0.7115	0.9652	0.0000	1.0000	124546	120215	3	3
hg38.chr1_KI270706v1_random	175055	GCA_029289425.2	0.8811	0.9828	0.0000	1.0000	154248	151597	3	3
hg38.chr1_KI270706v1_random	175055	hg38	1.0000	1.0000	0.0028	1.0000	175055	175055	489	489
hg38.chr1_KI270706v1_random	175055	hs1	0.9959	0.9992	0.0003	1.0000	174335	174200	59	59
hg38.chr1_KI270707v1_random	32032	GCA_028858775.2	0.8078	0.9676	0.0001	1.0000	25876	25038	3	3
hg38.chr1_KI270707v1_random	32032	GCA_028878055.2	0.5546	0.9304	0.0001	1.0000	17766	16530	3	3
hg38.chr1_KI270707v1_random	32032	GCA_028885625.2	0.5697	0.9450	0.0000	0.0000	18250	17247	0	0
hg38.chr1_KI270707v1_random	32032	GCA_028885655.2	0.5666	0.9459	0.0001	1.0000	18148	17167	3	3
hg38.chr1_KI270707v1_random	32032	GCA_029281585.2	0.7728	0.9577	0.0000	0.0000	24754	23706	0	0
hg38.chr1_KI270707v1_random	32032	GCA_029289425.2	0.8033	0.9681	0.0001	1.0000	25730	24908	3	3
hg38.chr1_KI270707v1_random	32032	hg38	1.0000	1.0000	0.0002	1.0000	32032	32032	8	8
hg38.chr1_KI270707v1_random	32032	hs1	0.8985	0.9936	0.0000	0.0000	28782	28599	0	0
hg38.chr1_KI270708v1_random	127682	GCA_028858775.2	0.5953	0.9684	0.0000	0.0000	76011	73612	0	0
hg38.chr1_KI270708v1_random	127682	GCA_028878055.2	0.3838	0.9326	0.0000	0.0000	49001	45696	0	0
hg38.chr1_KI270708v1_random	127682	GCA_028885625.2	0.4752	0.9608	0.0000	0.0000	60676	58295	0	0
hg38.chr1_KI270708v1_random	127682	GCA_028885655.2	0.4749	0.9601	0.0000	0.0000	60636	58215	0	0
hg38.chr1_KI270708v1_random	127682	GCA_029281585.2	0.5750	0.9770	0.0000	0.0000	73416	71731	0	0
hg38.chr1_KI270708v1_random	127682	GCA_029289425.2	0.5704	0.9678	0.0000	0.0000	72828	70484	0	0
hg38.chr1_KI270708v1_random	127682	hg38	1.0000	1.0000	0.0874	1.0000	127682	127682	11155	11155
hg38.chr1_KI270708v1_random	127682	hs1	0.9796	0.9901	0.0859	0.9606	125080	123837	10964	10532
hg38.chr1_KI270709v1_random	66860	GCA_028858775.2	0.5827	0.9367	0.0031	0.8585	38960	36494	205	176
hg38.chr1_KI270709v1_random	66860	GCA_028878055.2	0.1751	0.9499	0.0000	0.0000	11710	11123	0	0
hg38.chr1_KI270709v1_random	66860	GCA_028885625.2	0.2704	0.9457	0.0000	0.0000	18081	17100	0	0
hg38.chr1_KI270709v1_random	66860	GCA_028885655.2	0.2585	0.9456	0.0000	0.0000	17282	16342	0	0
hg38.chr1_KI270709v1_random	66860	GCA_029281585.2	0.3095	0.9730	0.0000	0.0000	20690	20131	0	0
hg38.chr1_KI270709v1_random	66860	GCA_029289425.2	0.5507	0.9435	0.0029	0.7876	36821	34740	193	152
hg38.chr1_KI270709v1_random	66860	hg38	1.0000	1.0000	0.0171	1.0000	66860	66860	1141	1141
hg38.chr1_KI270709v1_random	66860	hs1	0.8781	0.9600	0.0044	0.9493	58711	56364	296	281
hg38.chr1_KI270710v1_random	40176	GCA_028858775.2	0.9967	0.9867	0.0000	0.0000	40045	39513	0	0
hg38.chr1_KI270710v1_random	40176	GCA_028878055.2	0.5497	0.9531	0.0000	0.0000	22086	21051	0	0
hg38.chr1_KI270710v1_random	40176	GCA_028885625.2	0.5758	0.9537	0.0000	0.0000	23133	22063	0	0
hg38.chr1_KI270710v1_random	40176	GCA_028885655.2	0.5754	0.9531	0.0000	0.0000	23119	22035	0	0
hg38.chr1_KI270710v1_random	40176	GCA_029281585.2	0.6280	0.9853	0.0000	0.0000	25231	24861	0	0
hg38.chr1_KI270710v1_random	40176	GCA_029289425.2	0.9966	0.9863	0.0000	0.0000	40039	39490	0	0
hg38.chr1_KI270710v1_random	40176	hg38	1.0000	1.0000	0.0000	0.0000	40176	40176	0	0
hg38.chr1_KI270710v1_random	40176	hs1	0.9999	0.9945	0.0000	0.0000	40171	39949	0	0
hg38.chr1_KI270711v1_random	42210	GCA_028858775.2	0.4074	0.9644	0.0001	1.0000	17196	16583	4	4
hg38.chr1_KI270711v1_random	42210	GCA_028878055.2	0.1027	0.9241	0.0000	0.0000	4335	4006	0	0
hg38.chr1_KI270711v1_random	42210	GCA_028885625.2	0.2765	0.9166	0.0001	1.0000	11672	10698	4	4
hg38.chr1_KI270711v1_random	42210	GCA_028885655.2	0.2764	0.9164	0.0001	1.0000	11665	10690	4	4
hg38.chr1_KI270711v1_random	42210	GCA_029281585.2	0.4077	0.9633	0.0000	0.0000	17208	16576	0	0
hg38.chr1_KI270711v1_random	42210	GCA_029289425.2	0.4074	0.9646	0.0002	1.0000	17198	16589	10	10
hg38.chr1_KI270711v1_random	42210	hg38	1.0000	1.0000	0.0158	1.0000	42210	42210	668	668
hg38.chr1_KI270711v1_random	42210	hs1	0.9950	0.9981	0.0003	1.0000	42001	41922	12	12
hg38.chr1_KI270712v1_random	176043	GCA_028858775.2	0.7922	0.9867	0.0016	0.8105	139457	137609	285	231
hg38.chr1_KI270712v1_random	176043	GCA_028878055.2	0.5533	0.9535	0.0000	0.0000	97399	92868	0	0
hg38.chr1_KI270712v1_random	176043	GCA_028885625.2	0.5915	0.9613	0.0000	0.0000	104126	100094	0	0
hg38.chr1_KI270712v1_random	176043	GCA_028885655.2	0.5916	0.9615	0.0000	0.0000	104144	100135	0	0
hg38.chr1_KI270712v1_random	176043	GCA_029281585.2	0.7672	0.9817	0.0000	0.0000	135066	132595	0	0
hg38.chr1_KI270712v1_random	176043	GCA_029289425.2	0.7915	0.9868	0.0016	0.8175	139342	137498	285	233
hg38.chr1_KI270712v1_random	176043	hg38	1.0000	1.0000	0.1539	1.0000	176043	176043	27089	27089
hg38.chr1_KI270712v1_random	176043	hs1	0.9895	0.9927	0.1498	0.9756	174195	172917	26379	25736
hg38.chr1_KI270713v1_random	40745	GCA_028858775.2	0.6724	0.9851	0.0005	0.8947	27396	26988	19	17
hg38.chr1_KI270713v1_random	40745	GCA_028878055.2	0.5795	0.9576	0.0000	0.0000	23612	22610	0	0
hg38.chr1_KI270713v1_random	40745	GCA_028885625.2	0.6385	0.9655	0.0000	0.0000	26017	25120	0	0
hg38.chr1_KI270713v1_random	40745	GCA_028885655.2	0.6386	0.9658	0.0000	0.0000	26019	25130	0	0
hg38.chr1_KI270713v1_random	40745	GCA_029281585.2	0.6439	0.9827	0.0000	0.0000	26236	25781	0	0
hg38.chr1_KI270713v1_random	40745	GCA_029289425.2	0.7030	0.9873	0.0005	0.8500	28643	28278	20	17
hg38.chr1_KI270713v1_random	40745	hg38	1.0000	1.0000	0.0020	1.0000	40745	40745	80	80
hg38.chr1_KI270713v1_random	40745	hs1	0.9913	0.9999	0.0001	1.0000	40392	40389	4	4
hg38.chr1_KI270714v1_random	41717	GCA_028858775.2	0.9543	0.9918	0.0000	0.0000	39811	39485	0	0
hg38.chr1_KI270714v1_random	41717	GCA_028878055.2	0.7501	0.9539	0.0000	0.0000	31292	29848	0	0
hg38.chr1_KI270714v1_random	41717	GCA_028885625.2	0.7996	0.9751	0.0000	0.0000	33355	32524	0	0
hg38.chr1_KI270714v1_random	41717	GCA_028885655.2	0.7990	0.9749	0.0000	0.0000	33331	32495	0	0
hg38.chr1_KI270714v1_random	41717	GCA_029281585.2	0.8207	0.9593	0.0000	0.0000	34236	32843	0	0
hg38.chr1_KI270714v1_random	41717	GCA_029289425.2	0.9543	0.9915	0.0000	0.0000	39810	39471	0	0
hg38.chr1_KI270714v1_random	41717	hg38	1.0000	1.0000	0.0000	0.0000	41717	41717	0	0
hg38.chr1_KI270714v1_random	41717	hs1	0.9974	0.9946	0.0000	0.0000	41608	41385	0	0
hg38.chr1_KI270759v1_alt	425601	GCA_028858775.2	0.9885	0.9836	0.0070	0.9825	420688	413801	2977	2925
hg38.chr1_KI270759v1_alt	425601	GCA_028878055.2	0.9676	0.9521	0.0059	0.9452	411792	392048	2501	2364
hg38.chr1_KI270759v1_alt	425601	GCA_028885625.2	0.9781	0.9602	0.0069	0.9512	416261	399685	2928	2785
hg38.chr1_KI270759v1_alt	425601	GCA_028885655.2	0.9809	0.9602	0.0069	0.9498	417485	400852	2928	2781
hg38.chr1_KI270759v1_alt	425601	GCA_029281585.2	0.9857	0.9805	0.0062	0.9793	419521	411352	2657	2602
hg38.chr1_KI270759v1_alt	425601	GCA_029289425.2	0.9908	0.9833	0.0070	0.9795	421681	414652	2980	2919
hg38.chr1_KI270759v1_alt	425601	hg38	1.0000	1.0000	0.0074	1.0000	425601	425601	3159	3159
hg38.chr1_KI270759v1_alt	425601	hs1	0.9978	0.9991	0.0074	1.0000	424680	424309	3159	3159
hg38.chr1_KI270760v1_alt	109528	GCA_028858775.2	0.9428	0.9847	0.0145	0.9735	103261	101676	1586	1544
hg38.chr1_KI270760v1_alt	109528	GCA_028878055.2	0.1529	0.8325	0.0000	0.0000	16742	13938	0	0
hg38.chr1_KI270760v1_alt	109528	GCA_028885625.2	0.9224	0.9643	0.0143	0.9661	101029	97423	1565	1512
hg38.chr1_KI270760v1_alt	109528	GCA_028885655.2	0.9357	0.9641	0.0143	0.9655	102488	98808	1565	1511
hg38.chr1_KI270760v1_alt	109528	GCA_029281585.2	0.9425	0.9833	0.0145	0.9848	103230	101503	1584	1560
hg38.chr1_KI270760v1_alt	109528	GCA_029289425.2	0.9410	0.9846	0.0145	0.9767	103063	101474	1591	1554
hg38.chr1_KI270760v1_alt	109528	hg38	1.0000	1.0000	0.0145	1.0000	109528	109528	1591	1591
hg38.chr1_KI270760v1_alt	109528	hs1	0.9998	0.9989	0.0145	0.9994	109509	109389	1591	1590
hg38.chr1_KI270761v1_alt	165834	GCA_028858775.2	0.9372	0.9816	0.0000	0.0000	155413	152554	0	0
hg38.chr1_KI270761v1_alt	165834	GCA_028878055.2	0.8226	0.9456	0.0000	0.0000	136420	128997	0	0
hg38.chr1_KI270761v1_alt	165834	GCA_028885625.2	0.9108	0.9608	0.0000	0.0000	151037	145121	0	0
hg38.chr1_KI270761v1_alt	165834	GCA_028885655.2	0.9145	0.9607	0.0000	0.0000	151647	145688	0	0
hg38.chr1_KI270761v1_alt	165834	GCA_029281585.2	0.8781	0.9715	0.0000	0.0000	145617	141462	0	0
hg38.chr1_KI270761v1_alt	165834	GCA_029289425.2	0.9315	0.9841	0.0000	0.0000	154481	152022	0	0
hg38.chr1_KI270761v1_alt	165834	hg38	1.0000	1.0000	0.0002	1.0000	165834	165834	40	40
hg38.chr1_KI270761v1_alt	165834	hs1	0.9529	0.9966	0.0002	0.9500	158026	157491	40	38
hg38.chr1_KI270762v1_alt	354444	GCA_028858775.2	0.6493	0.9708	0.0022	0.8549	230145	223434	772	660
hg38.chr1_KI270762v1_alt	354444	GCA_028878055.2	0.5543	0.9494	0.0000	0.0000	196471	186528	0	0
hg38.chr1_KI270762v1_alt	354444	GCA_028885625.2	0.6173	0.9456	0.0004	0.6299	218811	206907	127	80
hg38.chr1_KI270762v1_alt	354444	GCA_028885655.2	0.6180	0.9460	0.0004	0.6299	219050	207226	127	80
hg38.chr1_KI270762v1_alt	354444	GCA_029281585.2	0.7733	0.9392	0.0029	0.7648	274102	257450	1016	777
hg38.chr1_KI270762v1_alt	354444	GCA_029289425.2	0.6826	0.9647	0.0024	0.8570	241934	233401	853	731
hg38.chr1_KI270762v1_alt	354444	hg38	0.8588	1.0000	0.0548	1.0000	304405	304405	19437	19437
hg38.chr1_KI270762v1_alt	354444	hs1	0.7589	0.9830	0.0372	0.8604	268986	264401	13185	11345
hg38.chr1_KI270763v1_alt	911658	GCA_028858775.2	0.9941	0.9900	0.0037	0.9932	906273	897213	3394	3371
hg38.chr1_KI270763v1_alt	911658	GCA_028878055.2	0.9613	0.9615	0.0037	0.9676	876400	842655	3364	3255
hg38.chr1_KI270763v1_alt	911658	GCA_028885625.2	0.9703	0.9699	0.0037	0.9644	884538	857956	3369	3249
hg38.chr1_KI270763v1_alt	911658	GCA_028885655.2	0.9701	0.9700	0.0037	0.9640	884396	857829	3359	3238
hg38.chr1_KI270763v1_alt	911658	GCA_029281585.2	0.9877	0.9861	0.0037	0.9817	900451	887908	3380	3318
hg38.chr1_KI270763v1_alt	911658	GCA_029289425.2	0.9928	0.9900	0.0037	0.9923	905052	896045	3395	3369
hg38.chr1_KI270763v1_alt	911658	hg38	1.0000	1.0000	0.0037	1.0000	911658	911658	3398	3398
hg38.chr1_KI270763v1_alt	911658	hs1	0.9987	0.9995	0.0037	1.0000	910445	910018	3398	3398
hg38.chr1_KI270764v1_alt	50258	GCA_028858775.2	0.9903	0.9877	0.0345	0.9867	49771	49159	1733	1710
hg38.chr1_KI270764v1_alt	50258	GCA_028878055.2	0.7352	0.9604	0.0435	0.9231	36952	35490	2185	2017
hg38.chr1_KI270764v1_alt	50258	GCA_028885625.2	0.9878	0.9665	0.0437	0.9354	49647	47983	2197	2055
hg38.chr1_KI270764v1_alt	50258	GCA_028885655.2	0.9880	0.9664	0.0437	0.9354	49657	47990	2198	2056
hg38.chr1_KI270764v1_alt	50258	GCA_029281585.2	0.9934	0.9830	0.0442	0.9527	49928	49079	2219	2114
hg38.chr1_KI270764v1_alt	50258	GCA_029289425.2	0.9893	0.9880	0.0324	0.9889	49718	49119	1628	1610
hg38.chr1_KI270764v1_alt	50258	hg38	1.0000	1.0000	0.0446	1.0000	50258	50258	2240	2240
hg38.chr1_KI270764v1_alt	50258	hs1	0.9998	0.9989	0.0446	0.9982	50248	50195	2239	2235
hg38.chr1_KI270765v1_alt	185285	GCA_028858775.2	0.9577	0.9874	0.0000	0.0000	177444	175203	0	0
hg38.chr1_KI270765v1_alt	185285	GCA_028878055.2	0.6677	0.9606	0.0000	0.0000	123713	118837	0	0
hg38.chr1_KI270765v1_alt	185285	GCA_028885625.2	0.7623	0.9665	0.0000	0.0000	141248	136512	0	0
hg38.chr1_KI270765v1_alt	185285	GCA_028885655.2	0.7475	0.9665	0.0000	0.0000	138505	133867	0	0
hg38.chr1_KI270765v1_alt	185285	GCA_029281585.2	0.9075	0.9830	0.0000	0.0000	168138	165276	0	0
hg38.chr1_KI270765v1_alt	185285	GCA_029289425.2	0.9557	0.9882	0.0000	0.0000	177077	174982	0	0
hg38.chr1_KI270765v1_alt	185285	hg38	1.0000	1.0000	0.0002	1.0000	185285	185285	35	35
hg38.chr1_KI270765v1_alt	185285	hs1	0.9987	0.9999	0.0002	1.0000	185043	185022	35	35
hg38.chr1_KI270766v1_alt	256271	GCA_028858775.2	0.9080	0.9821	0.0006	0.7250	232683	228515	160	116
hg38.chr1_KI270766v1_alt	256271	GCA_028878055.2	0.3275	0.9219	0.0000	0.6667	83928	77372	3	2
hg38.chr1_KI270766v1_alt	256271	GCA_028885625.2	0.7247	0.9502	0.0000	1.0000	185729	176487	1	1
hg38.chr1_KI270766v1_alt	256271	GCA_028885655.2	0.7271	0.9514	0.0000	1.0000	186324	177269	1	1
hg38.chr1_KI270766v1_alt	256271	GCA_029281585.2	0.8932	0.9795	0.0000	1.0000	228889	224205	2	2
hg38.chr1_KI270766v1_alt	256271	GCA_029289425.2	0.7903	0.9791	0.0006	0.7312	202542	198303	160	117
hg38.chr1_KI270766v1_alt	256271	hg38	1.0000	1.0000	0.0279	1.0000	256271	256271	7145	7145
hg38.chr1_KI270766v1_alt	256271	hs1	0.9969	0.9990	0.0272	0.9996	255475	255232	6966	6963
hg38.chr1_KI270892v1_alt	162212	GCA_028858775.2	0.9608	0.9816	0.0000	0.0000	155851	152980	0	0
hg38.chr1_KI270892v1_alt	162212	GCA_028878055.2	0.8428	0.9455	0.0000	0.0000	136708	129264	0	0
hg38.chr1_KI270892v1_alt	162212	GCA_028885625.2	0.9327	0.9608	0.0000	0.0000	151299	145374	0	0
hg38.chr1_KI270892v1_alt	162212	GCA_028885655.2	0.9363	0.9607	0.0000	0.0000	151884	145918	0	0
hg38.chr1_KI270892v1_alt	162212	GCA_029281585.2	0.8991	0.9716	0.0000	0.0000	145844	141701	0	0
hg38.chr1_KI270892v1_alt	162212	GCA_029289425.2	0.9551	0.9840	0.0000	0.0000	154921	152449	0	0
hg38.chr1_KI270892v1_alt	162212	hg38	1.0000	1.0000	0.0000	0.0000	162212	162212	0	0
hg38.chr1_KI270892v1_alt	162212	hs1	0.9769	0.9965	0.0000	0.0000	158467	157920	0	0
hg38.chr2	242193529	GCA_028858775.2	0.9632	0.9870	0.9159	0.9870	233285795	230259306	221823208	218948426
hg38.chr2	242193529	GCA_028878055.2	0.9089	0.9614	0.8661	0.9616	220137669	211639308	209765381	201717133
hg38.chr2	242193529	GCA_028885625.2	0.9405	0.9671	0.8931	0.9672	227793152	220300872	216304926	209202737
hg38.chr2	242193529	GCA_028885655.2	0.9406	0.9671	0.8933	0.9672	227814604	220322771	216358578	209255264
hg38.chr2	242193529	GCA_029281585.2	0.9613	0.9835	0.9134	0.9835	232820455	228968171	221227806	217575957
hg38.chr2	242193529	GCA_029289425.2	0.9653	0.9870	0.9158	0.9870	233795124	230756655	221797200	218921640
hg38.chr2	242193529	hg38	0.9928	1.0000	0.9436	1.0000	240444558	240444558	228543262	228543262
hg38.chr2	242193529	hs1	0.9853	0.9989	0.9389	0.9989	238628920	238357789	227385348	227127623
hg38.chr20	64444167	GCA_028858775.2	0.9260	0.9856	0.8791	0.9859	59676308	58818899	56654549	55856706
hg38.chr20	64444167	GCA_028878055.2	0.8708	0.9598	0.8282	0.9604	56118372	53864606	53372744	51257513
hg38.chr20	64444167	GCA_028885625.2	0.9001	0.9657	0.8540	0.9660	58005753	56015945	55032887	53163223
hg38.chr20	64444167	GCA_028885655.2	0.9011	0.9657	0.8551	0.9660	58068410	56074820	55108668	53236025
hg38.chr20	64444167	GCA_029281585.2	0.9210	0.9821	0.8753	0.9824	59350261	58288805	56408857	55417648
hg38.chr20	64444167	GCA_029289425.2	0.9261	0.9856	0.8773	0.9859	59683292	58824870	56538340	55741081
hg38.chr20	64444167	hg38	0.9712	1.0000	0.9242	1.0000	62585763	62585763	59561522	59561522
hg38.chr20	64444167	hs1	0.9512	0.9983	0.9039	0.9985	61301595	61197755	58251250	58161959
hg38.chr20_GL383577v2_alt	128386	GCA_028858775.2	0.9484	0.9853	0.0000	0.0000	121765	119975	0	0
hg38.chr20_GL383577v2_alt	128386	GCA_028878055.2	0.9211	0.9597	0.0000	0.0000	118253	113492	0	0
hg38.chr20_GL383577v2_alt	128386	GCA_028885625.2	0.9351	0.9646	0.0000	0.0000	120051	115807	0	0
hg38.chr20_GL383577v2_alt	128386	GCA_028885655.2	0.9272	0.9646	0.0000	0.0000	119034	114824	0	0
hg38.chr20_GL383577v2_alt	128386	GCA_029281585.2	0.9499	0.9825	0.0000	0.0000	121951	119814	0	0
hg38.chr20_GL383577v2_alt	128386	GCA_029289425.2	0.9488	0.9854	0.0000	0.0000	121815	120041	0	0
hg38.chr20_GL383577v2_alt	128386	hg38	1.0000	1.0000	0.0000	0.0000	128386	128386	0	0
hg38.chr20_GL383577v2_alt	128386	hs1	0.9526	0.9990	0.0000	0.0000	122297	122169	0	0
hg38.chr20_KI270869v1_alt	118774	GCA_028858775.2	0.9597	0.9795	0.0000	0.0000	113992	111660	0	0
hg38.chr20_KI270869v1_alt	118774	GCA_028878055.2	0.8988	0.9480	0.0000	0.0000	106760	101209	0	0
hg38.chr20_KI270869v1_alt	118774	GCA_028885625.2	0.9059	0.9539	0.0000	0.0000	107595	102630	0	0
hg38.chr20_KI270869v1_alt	118774	GCA_028885655.2	0.9057	0.9539	0.0000	0.0000	107574	102613	0	0
hg38.chr20_KI270869v1_alt	118774	GCA_029281585.2	0.9381	0.9760	0.0000	0.0000	111421	108752	0	0
hg38.chr20_KI270869v1_alt	118774	GCA_029289425.2	0.9549	0.9800	0.0000	0.0000	113418	111154	0	0
hg38.chr20_KI270869v1_alt	118774	hg38	1.0000	1.0000	0.0000	0.0000	118774	118774	0	0
hg38.chr20_KI270869v1_alt	118774	hs1	0.9894	0.9972	0.0000	0.0000	117518	117194	0	0
hg38.chr20_KI270870v1_alt	183433	GCA_028858775.2	0.8982	0.9837	0.0000	0.0000	164753	162070	0	0
hg38.chr20_KI270870v1_alt	183433	GCA_028878055.2	0.8387	0.9514	0.0000	0.0000	153842	146360	0	0
hg38.chr20_KI270870v1_alt	183433	GCA_028885625.2	0.8578	0.9585	0.0000	0.0000	157345	150823	0	0
hg38.chr20_KI270870v1_alt	183433	GCA_028885655.2	0.8567	0.9585	0.0000	0.0000	157151	150629	0	0
hg38.chr20_KI270870v1_alt	183433	GCA_029281585.2	0.8805	0.9786	0.0000	0.0000	161519	158056	0	0
hg38.chr20_KI270870v1_alt	183433	GCA_029289425.2	0.8908	0.9836	0.0000	0.0000	163408	160733	0	0
hg38.chr20_KI270870v1_alt	183433	hg38	1.0000	1.0000	0.0000	0.0000	183433	183433	0	0
hg38.chr20_KI270870v1_alt	183433	hs1	0.9364	0.9984	0.0000	0.0000	171758	171484	0	0
hg38.chr20_KI270871v1_alt	58661	GCA_028858775.2	0.9774	0.9793	0.0050	0.9107	57336	56147	291	265
hg38.chr20_KI270871v1_alt	58661	GCA_028878055.2	0.9110	0.9414	0.0064	0.9550	53442	50312	378	361
hg38.chr20_KI270871v1_alt	58661	GCA_028885625.2	0.9494	0.9464	0.0131	0.9400	55694	52710	767	721
hg38.chr20_KI270871v1_alt	58661	GCA_028885655.2	0.9497	0.9468	0.0140	0.9451	55708	52746	820	775
hg38.chr20_KI270871v1_alt	58661	GCA_029281585.2	0.9639	0.9756	0.0198	0.9320	56542	55162	1161	1082
hg38.chr20_KI270871v1_alt	58661	GCA_029289425.2	0.9854	0.9790	0.0130	0.9333	57806	56594	765	714
hg38.chr20_KI270871v1_alt	58661	hg38	1.0000	1.0000	0.0210	1.0000	58661	58661	1229	1229
hg38.chr20_KI270871v1_alt	58661	hs1	0.9977	0.9987	0.0205	0.9834	58525	58449	1203	1183
hg38.chr21	46709983	GCA_028858775.2	0.7740	0.9851	0.6407	0.9854	36152645	35614477	29927635	29491095
hg38.chr21	46709983	GCA_028878055.2	0.6828	0.9577	0.5813	0.9594	31895805	30546161	27152450	26051175
hg38.chr21	46709983	GCA_028885625.2	0.7448	0.9633	0.6309	0.9639	34789238	33511427	29467247	28402480
hg38.chr21	46709983	GCA_028885655.2	0.7457	0.9633	0.6329	0.9639	34832467	33553080	29562695	28494105
hg38.chr21	46709983	GCA_029281585.2	0.7708	0.9813	0.6420	0.9818	36005350	35331610	29987102	29440559
hg38.chr21	46709983	GCA_029289425.2	0.7725	0.9848	0.6382	0.9854	36083132	35535016	29811582	29376215
hg38.chr21	46709983	hg38	0.8130	1.0000	0.6674	1.0000	37975887	37975887	31173273	31173273
hg38.chr21	46709983	hs1	0.8066	0.9985	0.6637	0.9987	37678496	37623145	31002262	30961840
hg38.chr21_GL383578v2_alt	63917	GCA_028858775.2	0.9962	0.9875	0.1885	0.9800	63675	62879	12049	11808
hg38.chr21_GL383578v2_alt	63917	GCA_028878055.2	0.7970	0.9584	0.0332	0.9547	50941	48822	2121	2025
hg38.chr21_GL383578v2_alt	63917	GCA_028885625.2	0.9899	0.9628	0.1888	0.9579	63270	60919	12065	11557
hg38.chr21_GL383578v2_alt	63917	GCA_028885655.2	0.9900	0.9629	0.1888	0.9579	63279	60932	12068	11560
hg38.chr21_GL383578v2_alt	63917	GCA_029281585.2	0.9968	0.9812	0.1890	0.9796	63711	62512	12083	11836
hg38.chr21_GL383578v2_alt	63917	GCA_029289425.2	0.9960	0.9877	0.1886	0.9805	63664	62879	12055	11820
hg38.chr21_GL383578v2_alt	63917	hg38	1.0000	1.0000	0.1894	1.0000	63917	63917	12103	12103
hg38.chr21_GL383578v2_alt	63917	hs1	0.9998	0.9994	0.1893	0.9988	63907	63866	12098	12083
hg38.chr21_GL383579v2_alt	201197	GCA_028858775.2	0.9333	0.9866	0.0000	0.0000	187776	185255	0	0
hg38.chr21_GL383579v2_alt	201197	GCA_028878055.2	0.7915	0.9642	0.0000	0.0000	159251	153548	0	0
hg38.chr21_GL383579v2_alt	201197	GCA_028885625.2	0.9114	0.9647	0.0000	0.0000	183363	176893	0	0
hg38.chr21_GL383579v2_alt	201197	GCA_028885655.2	0.9114	0.9648	0.0000	0.0000	183379	176928	0	0
hg38.chr21_GL383579v2_alt	201197	GCA_029281585.2	0.9440	0.9821	0.0000	0.0000	189923	186523	0	0
hg38.chr21_GL383579v2_alt	201197	GCA_029289425.2	0.9511	0.9863	0.0000	0.0000	191367	188748	0	0
hg38.chr21_GL383579v2_alt	201197	hg38	1.0000	1.0000	0.0000	0.0000	201197	201197	0	0
hg38.chr21_GL383579v2_alt	201197	hs1	0.9110	0.9992	0.0000	0.0000	183292	183139	0	0
hg38.chr21_GL383580v2_alt	74653	GCA_028858775.2	0.9436	0.9907	0.0141	0.9762	70446	69794	1049	1024
hg38.chr21_GL383580v2_alt	74653	GCA_028878055.2	0.9373	0.9657	0.0140	0.9532	69970	67568	1046	997
hg38.chr21_GL383580v2_alt	74653	GCA_028885625.2	0.9389	0.9681	0.0140	0.9434	70090	67853	1043	984
hg38.chr21_GL383580v2_alt	74653	GCA_028885655.2	0.9390	0.9681	0.0140	0.9453	70096	67857	1043	986
hg38.chr21_GL383580v2_alt	74653	GCA_029281585.2	0.9439	0.9857	0.0140	0.9665	70463	69458	1045	1010
hg38.chr21_GL383580v2_alt	74653	GCA_029289425.2	0.9440	0.9907	0.0141	0.9762	70474	69818	1049	1024
hg38.chr21_GL383580v2_alt	74653	hg38	1.0000	1.0000	0.0663	1.0000	74653	74653	4952	4952
hg38.chr21_GL383580v2_alt	74653	hs1	0.9467	0.9990	0.0144	0.9842	70672	70602	1075	1058
hg38.chr21_GL383581v2_alt	116689	GCA_028858775.2	0.6887	0.9878	0.3707	0.9875	80368	79388	43251	42710
hg38.chr21_GL383581v2_alt	116689	GCA_028878055.2	0.6846	0.9594	0.3674	0.9607	79881	76635	42868	41182
hg38.chr21_GL383581v2_alt	116689	GCA_028885625.2	0.6697	0.9668	0.3657	0.9655	78144	75550	42678	41205
hg38.chr21_GL383581v2_alt	116689	GCA_028885655.2	0.6699	0.9667	0.3659	0.9654	78168	75565	42697	41221
hg38.chr21_GL383581v2_alt	116689	GCA_029281585.2	0.6945	0.9844	0.3737	0.9842	81039	79776	43611	42923
hg38.chr21_GL383581v2_alt	116689	GCA_029289425.2	0.6888	0.9880	0.3708	0.9877	80373	79408	43267	42734
hg38.chr21_GL383581v2_alt	116689	hg38	0.6997	1.0000	0.3774	1.0000	81649	81649	44039	44039
hg38.chr21_GL383581v2_alt	116689	hs1	0.6997	0.9999	0.3774	0.9999	81645	81635	44036	44032
hg38.chr21_KI270872v1_alt	82692	GCA_028858775.2	0.9138	0.9832	0.0000	0.0000	75568	74298	0	0
hg38.chr21_KI270872v1_alt	82692	GCA_028878055.2	0.7797	0.9523	0.0000	0.0000	64474	61401	0	0
hg38.chr21_KI270872v1_alt	82692	GCA_028885625.2	0.8373	0.9571	0.0000	0.0000	69236	66266	0	0
hg38.chr21_KI270872v1_alt	82692	GCA_028885655.2	0.8393	0.9568	0.0000	0.0000	69402	66405	0	0
hg38.chr21_KI270872v1_alt	82692	GCA_029281585.2	0.9309	0.9763	0.0000	0.0000	76979	75153	0	0
hg38.chr21_KI270872v1_alt	82692	GCA_029289425.2	0.9236	0.9831	0.0000	0.0000	76375	75087	0	0
hg38.chr21_KI270872v1_alt	82692	hg38	1.0000	1.0000	0.0026	1.0000	82692	82692	218	218
hg38.chr21_KI270872v1_alt	82692	hs1	0.9632	0.9979	0.0026	0.8651	79646	79481	215	186
hg38.chr21_KI270873v1_alt	143900	GCA_028858775.2	0.9792	0.9876	0.0235	0.9861	140907	139163	3383	3336
hg38.chr21_KI270873v1_alt	143900	GCA_028878055.2	0.9332	0.9621	0.0235	0.9618	134292	129206	3376	3247
hg38.chr21_KI270873v1_alt	143900	GCA_028885625.2	0.9392	0.9660	0.0232	0.9581	135157	130568	3344	3204
hg38.chr21_KI270873v1_alt	143900	GCA_028885655.2	0.9312	0.9661	0.0232	0.9575	133998	129458	3344	3202
hg38.chr21_KI270873v1_alt	143900	GCA_029281585.2	0.9803	0.9834	0.0236	0.9800	141063	138728	3396	3328
hg38.chr21_KI270873v1_alt	143900	GCA_029289425.2	0.9787	0.9870	0.0235	0.9861	140831	139004	3375	3328
hg38.chr21_KI270873v1_alt	143900	hg38	1.0000	1.0000	0.0238	1.0000	143900	143900	3421	3421
hg38.chr21_KI270873v1_alt	143900	hs1	0.9999	0.9998	0.0238	0.9997	143886	143861	3421	3420
hg38.chr21_KI270874v1_alt	166743	GCA_028858775.2	0.9822	0.9853	0.0156	0.9854	163778	161376	2599	2561
hg38.chr21_KI270874v1_alt	166743	GCA_028878055.2	0.9060	0.9575	0.0154	0.9421	151062	144649	2574	2425
hg38.chr21_KI270874v1_alt	166743	GCA_028885625.2	0.9112	0.9623	0.0155	0.9652	151932	146202	2588	2498
hg38.chr21_KI270874v1_alt	166743	GCA_028885655.2	0.9110	0.9621	0.0155	0.9641	151901	146141	2588	2495
hg38.chr21_KI270874v1_alt	166743	GCA_029281585.2	0.9811	0.9775	0.0156	0.9772	163597	159908	2593	2534
hg38.chr21_KI270874v1_alt	166743	GCA_029289425.2	0.9820	0.9851	0.0156	0.9850	163747	161311	2599	2560
hg38.chr21_KI270874v1_alt	166743	hg38	1.0000	1.0000	0.0156	1.0000	166743	166743	2599	2599
hg38.chr21_KI270874v1_alt	166743	hs1	0.9725	0.9981	0.0000	0.0000	162165	161863	0	0
hg38.chr22	50818468	GCA_028858775.2	0.6938	0.9844	0.5681	0.9853	35257606	34707903	28867724	28443532
hg38.chr22	50818468	GCA_028878055.2	0.6179	0.9564	0.5188	0.9577	31399778	30029434	26367048	25250834
hg38.chr22	50818468	GCA_028885625.2	0.6552	0.9619	0.5482	0.9628	33296460	32026609	27857081	26820664
hg38.chr22	50818468	GCA_028885655.2	0.6545	0.9618	0.5478	0.9628	33258669	31986835	27840152	26804118
hg38.chr22	50818468	GCA_029281585.2	0.6804	0.9812	0.5585	0.9820	34575476	33925596	28384155	27872299
hg38.chr22	50818468	GCA_029289425.2	0.6939	0.9845	0.5655	0.9858	35260480	34712714	28736394	28327316
hg38.chr22	50818468	hg38	0.7673	1.0000	0.5967	1.0000	38991042	38991042	30320893	30320893
hg38.chr22	50818468	hs1	0.7236	0.9979	0.5914	0.9985	36772435	36695728	30053023	30008787
hg38.chr22_GL383582v2_alt	162811	GCA_028858775.2	0.9839	0.9893	0.0000	0.0000	160190	158477	0	0
hg38.chr22_GL383582v2_alt	162811	GCA_028878055.2	0.9408	0.9635	0.0000	0.0000	153172	147587	0	0
hg38.chr22_GL383582v2_alt	162811	GCA_028885625.2	0.9583	0.9664	0.0000	0.0000	156026	150790	0	0
hg38.chr22_GL383582v2_alt	162811	GCA_028885655.2	0.9173	0.9655	0.0000	0.0000	149351	144197	0	0
hg38.chr22_GL383582v2_alt	162811	GCA_029281585.2	0.9767	0.9823	0.0000	0.0000	159017	156207	0	0
hg38.chr22_GL383582v2_alt	162811	GCA_029289425.2	0.9823	0.9893	0.0000	0.0000	159925	158211	0	0
hg38.chr22_GL383582v2_alt	162811	hg38	1.0000	1.0000	0.0000	0.0000	162811	162811	0	0
hg38.chr22_GL383582v2_alt	162811	hs1	0.9987	0.9990	0.0000	0.0000	162601	162436	0	0
hg38.chr22_GL383583v2_alt	96924	GCA_028858775.2	0.9685	0.9833	0.0000	0.0000	93872	92309	0	0
hg38.chr22_GL383583v2_alt	96924	GCA_028878055.2	0.7172	0.9535	0.0000	0.0000	69513	66281	0	0
hg38.chr22_GL383583v2_alt	96924	GCA_028885625.2	0.9622	0.9563	0.0000	0.0000	93259	89186	0	0
hg38.chr22_GL383583v2_alt	96924	GCA_028885655.2	0.9597	0.9559	0.0000	0.0000	93019	88915	0	0
hg38.chr22_GL383583v2_alt	96924	GCA_029281585.2	0.9485	0.9810	0.0000	0.0000	91933	90186	0	0
hg38.chr22_GL383583v2_alt	96924	GCA_029289425.2	0.9690	0.9832	0.0000	0.0000	93923	92342	0	0
hg38.chr22_GL383583v2_alt	96924	hg38	1.0000	1.0000	0.0000	0.0000	96924	96924	0	0
hg38.chr22_GL383583v2_alt	96924	hs1	0.9995	0.9974	0.0000	0.0000	96874	96625	0	0
hg38.chr22_KB663609v1_alt	74013	GCA_028858775.2	0.9790	0.9892	0.0000	0.0000	72460	71679	0	0
hg38.chr22_KB663609v1_alt	74013	GCA_028878055.2	0.9528	0.9634	0.0000	0.0000	70522	67940	0	0
hg38.chr22_KB663609v1_alt	74013	GCA_028885625.2	0.9520	0.9641	0.0000	0.0000	70459	67933	0	0
hg38.chr22_KB663609v1_alt	74013	GCA_028885655.2	0.9506	0.9635	0.0000	0.0000	70358	67793	0	0
hg38.chr22_KB663609v1_alt	74013	GCA_029281585.2	0.9642	0.9803	0.0000	0.0000	71361	69954	0	0
hg38.chr22_KB663609v1_alt	74013	GCA_029289425.2	0.9795	0.9894	0.0000	0.0000	72497	71731	0	0
hg38.chr22_KB663609v1_alt	74013	hg38	1.0000	1.0000	0.0000	0.0000	74013	74013	0	0
hg38.chr22_KB663609v1_alt	74013	hs1	0.9985	0.9978	0.0000	0.0000	73903	73744	0	0
hg38.chr22_KI270731v1_random	150754	GCA_028858775.2	0.9094	0.9882	0.0000	0.0000	137102	135487	0	0
hg38.chr22_KI270731v1_random	150754	GCA_028878055.2	0.5833	0.9535	0.0000	0.0000	87933	83846	0	0
hg38.chr22_KI270731v1_random	150754	GCA_028885625.2	0.5924	0.9548	0.0000	0.0000	89314	85280	0	0
hg38.chr22_KI270731v1_random	150754	GCA_028885655.2	0.5883	0.9555	0.0000	0.0000	88686	84741	0	0
hg38.chr22_KI270731v1_random	150754	GCA_029281585.2	0.7265	0.9755	0.0000	0.0000	109518	106837	0	0
hg38.chr22_KI270731v1_random	150754	GCA_029289425.2	0.9101	0.9883	0.0000	0.0000	137206	135596	0	0
hg38.chr22_KI270731v1_random	150754	hg38	1.0000	1.0000	0.0000	1.0000	150754	150754	7	7
hg38.chr22_KI270731v1_random	150754	hs1	0.9925	0.9979	0.0000	1.0000	149626	149311	4	4
hg38.chr22_KI270732v1_random	41543	GCA_028858775.2	0.9383	0.9815	0.0000	0.0000	38980	38259	0	0
hg38.chr22_KI270732v1_random	41543	GCA_028878055.2	0.5131	0.9698	0.0000	0.0000	21315	20671	0	0
hg38.chr22_KI270732v1_random	41543	GCA_028885625.2	0.5047	0.9619	0.0000	0.0000	20968	20169	0	0
hg38.chr22_KI270732v1_random	41543	GCA_028885655.2	0.5055	0.9623	0.0000	0.0000	21001	20210	0	0
hg38.chr22_KI270732v1_random	41543	GCA_029281585.2	0.6267	0.9610	0.0000	0.0000	26035	25019	0	0
hg38.chr22_KI270732v1_random	41543	GCA_029289425.2	0.9381	0.9820	0.0000	0.0000	38971	38268	0	0
hg38.chr22_KI270732v1_random	41543	hg38	1.0000	1.0000	0.0028	1.0000	41543	41543	118	118
hg38.chr22_KI270732v1_random	41543	hs1	0.9999	0.9995	0.0022	1.0000	41539	41517	90	90
hg38.chr22_KI270733v1_random	179772	GCA_028858775.2	0.7878	0.9645	0.0000	0.0000	141623	136594	0	0
hg38.chr22_KI270733v1_random	179772	GCA_028878055.2	0.2777	0.8944	0.0000	1.0000	49914	44642	1	1
hg38.chr22_KI270733v1_random	179772	GCA_028885625.2	0.4490	0.9305	0.0000	0.0000	80719	75110	0	0
hg38.chr22_KI270733v1_random	179772	GCA_028885655.2	0.4493	0.9336	0.0000	0.0000	80776	75409	0	0
hg38.chr22_KI270733v1_random	179772	GCA_029281585.2	0.6890	0.9603	0.0000	0.8333	123855	118941	6	5
hg38.chr22_KI270733v1_random	179772	GCA_029289425.2	0.7852	0.9633	0.0000	0.0000	141162	135975	0	0
hg38.chr22_KI270733v1_random	179772	hg38	1.0000	1.0000	0.0000	1.0000	179772	179772	7	7
hg38.chr22_KI270733v1_random	179772	hs1	0.9447	0.9955	0.0000	1.0000	169833	169066	1	1
hg38.chr22_KI270734v1_random	165050	GCA_028858775.2	0.9390	0.9874	0.0028	0.8684	154974	153022	456	396
hg38.chr22_KI270734v1_random	165050	GCA_028878055.2	0.6100	0.9590	0.0000	0.0000	100683	96558	0	0
hg38.chr22_KI270734v1_random	165050	GCA_028885625.2	0.6285	0.9618	0.0000	0.0000	103728	99769	0	0
hg38.chr22_KI270734v1_random	165050	GCA_028885655.2	0.6283	0.9620	0.0000	0.0000	103709	99766	0	0
hg38.chr22_KI270734v1_random	165050	GCA_029281585.2	0.8614	0.9831	0.0000	1.0000	142176	139779	1	1
hg38.chr22_KI270734v1_random	165050	GCA_029289425.2	0.9402	0.9876	0.0028	0.8599	155180	153263	464	399
hg38.chr22_KI270734v1_random	165050	hg38	1.0000	1.0000	0.0032	1.0000	165042	165042	533	533
hg38.chr22_KI270734v1_random	165050	hs1	0.9809	0.9983	0.0011	0.9091	161903	161625	187	170
hg38.chr22_KI270735v1_random	42811	GCA_028858775.2	0.7099	0.9728	0.0000	0.0000	30390	29563	0	0
hg38.chr22_KI270735v1_random	42811	GCA_028878055.2	0.2670	0.9721	0.0000	0.0000	11432	11113	0	0
hg38.chr22_KI270735v1_random	42811	GCA_028885625.2	0.3244	0.9642	0.0000	0.0000	13888	13391	0	0
hg38.chr22_KI270735v1_random	42811	GCA_028885655.2	0.3244	0.9627	0.0000	0.0000	13887	13369	0	0
hg38.chr22_KI270735v1_random	42811	GCA_029281585.2	0.5516	0.9701	0.0000	0.0000	23613	22908	0	0
hg38.chr22_KI270735v1_random	42811	GCA_029289425.2	0.7119	0.9726	0.0000	0.0000	30476	29640	0	0
hg38.chr22_KI270735v1_random	42811	hg38	1.0000	1.0000	0.0920	1.0000	42811	42811	3937	3937
hg38.chr22_KI270735v1_random	42811	hs1	0.9895	0.9876	0.0815	0.8601	42363	41838	3488	3000
hg38.chr22_KI270736v1_random	181920	GCA_028858775.2	0.2464	0.9598	0.0000	0.0000	44816	43013	0	0
hg38.chr22_KI270736v1_random	181920	GCA_028878055.2	0.2381	0.9512	0.0000	0.0000	43321	41206	0	0
hg38.chr22_KI270736v1_random	181920	GCA_028885625.2	0.2455	0.9561	0.0000	0.0000	44668	42709	0	0
hg38.chr22_KI270736v1_random	181920	GCA_028885655.2	0.2455	0.9557	0.0000	0.0000	44666	42687	0	0
hg38.chr22_KI270736v1_random	181920	GCA_029281585.2	0.2602	0.9832	0.0130	0.9117	47328	46534	2356	2148
hg38.chr22_KI270736v1_random	181920	GCA_029289425.2	0.2464	0.9595	0.0000	0.0000	44819	43003	0	0
hg38.chr22_KI270736v1_random	181920	hg38	0.4174	1.0000	0.1700	1.0000	75935	75935	30920	30920
hg38.chr22_KI270736v1_random	181920	hs1	0.3179	0.9997	0.0211	0.9982	57829	57812	3835	3828
hg38.chr22_KI270737v1_random	103838	GCA_028858775.2	0.2859	0.9645	0.0000	0.0000	29686	28631	0	0
hg38.chr22_KI270737v1_random	103838	GCA_028878055.2	0.1265	0.9704	0.0000	0.0000	13133	12744	0	0
hg38.chr22_KI270737v1_random	103838	GCA_028885625.2	0.1222	0.9587	0.0000	0.0000	12686	12162	0	0
hg38.chr22_KI270737v1_random	103838	GCA_028885655.2	0.1223	0.9599	0.0000	0.0000	12697	12188	0	0
hg38.chr22_KI270737v1_random	103838	GCA_029281585.2	0.1378	0.9822	0.0000	0.0000	14305	14051	0	0
hg38.chr22_KI270737v1_random	103838	GCA_029289425.2	0.2842	0.9605	0.0000	0.0000	29511	28344	0	0
hg38.chr22_KI270737v1_random	103838	hg38	0.4319	1.0000	0.0006	1.0000	44844	44844	66	66
hg38.chr22_KI270737v1_random	103838	hs1	0.3039	0.9987	0.0006	1.0000	31555	31514	66	66
hg38.chr22_KI270738v1_random	99375	GCA_028858775.2	0.1636	0.9785	0.0000	0.0000	16259	15909	0	0
hg38.chr22_KI270738v1_random	99375	GCA_028878055.2	0.0008	0.6250	0.0000	0.0000	80	50	0	0
hg38.chr22_KI270738v1_random	99375	GCA_028885625.2	0.1117	0.9561	0.0000	0.0000	11105	10617	0	0
hg38.chr22_KI270738v1_random	99375	GCA_028885655.2	0.0864	0.9501	0.0000	0.0000	8582	8154	0	0
hg38.chr22_KI270738v1_random	99375	GCA_029281585.2	0.1294	0.9750	0.0000	0.0000	12857	12535	0	0
hg38.chr22_KI270738v1_random	99375	GCA_029289425.2	0.1637	0.9795	0.0000	0.0000	16264	15930	0	0
hg38.chr22_KI270738v1_random	99375	hg38	0.9642	1.0000	0.6168	1.0000	95814	95814	61299	61299
hg38.chr22_KI270738v1_random	99375	hs1	0.9641	0.9996	0.6160	0.9996	95809	95770	61216	61189
hg38.chr22_KI270875v1_alt	259914	GCA_028858775.2	0.8514	0.9691	0.0000	0.9091	221278	214440	11	10
hg38.chr22_KI270875v1_alt	259914	GCA_028878055.2	0.5809	0.9493	0.0018	0.7134	150986	143338	478	341
hg38.chr22_KI270875v1_alt	259914	GCA_028885625.2	0.7475	0.9527	0.0242	0.9464	194273	185079	6288	5951
hg38.chr22_KI270875v1_alt	259914	GCA_028885655.2	0.7189	0.9487	0.0012	0.8990	186859	177268	307	276
hg38.chr22_KI270875v1_alt	259914	GCA_029281585.2	0.8009	0.9688	0.0252	0.9798	208163	201664	6549	6417
hg38.chr22_KI270875v1_alt	259914	GCA_029289425.2	0.9288	0.9860	0.0245	0.9841	241420	238042	6359	6258
hg38.chr22_KI270875v1_alt	259914	hg38	1.0000	1.0000	0.0384	1.0000	259914	259914	9983	9983
hg38.chr22_KI270875v1_alt	259914	hs1	0.9990	0.9988	0.0384	0.9997	259657	259340	9983	9980
hg38.chr22_KI270876v1_alt	263666	GCA_028858775.2	0.9640	0.9824	0.0122	0.9820	254181	249719	3228	3170
hg38.chr22_KI270876v1_alt	263666	GCA_028878055.2	0.9173	0.9605	0.0123	0.9515	241851	232303	3240	3083
hg38.chr22_KI270876v1_alt	263666	GCA_028885625.2	0.9602	0.9649	0.0123	0.9488	253164	244268	3242	3076
hg38.chr22_KI270876v1_alt	263666	GCA_028885655.2	0.9607	0.9648	0.0123	0.9497	253310	244406	3238	3075
hg38.chr22_KI270876v1_alt	263666	GCA_029281585.2	0.9808	0.9813	0.0083	0.9793	258600	253756	2177	2132
hg38.chr22_KI270876v1_alt	263666	GCA_029289425.2	0.9687	0.9832	0.0123	0.9806	255410	251125	3246	3183
hg38.chr22_KI270876v1_alt	263666	hg38	1.0000	1.0000	0.0196	1.0000	263666	263666	5172	5172
hg38.chr22_KI270876v1_alt	263666	hs1	0.9753	0.9997	0.0000	0.0000	257153	257072	0	0
hg38.chr22_KI270877v1_alt	101331	GCA_028858775.2	0.9931	0.9822	0.0248	0.9825	100629	98840	2512	2468
hg38.chr22_KI270877v1_alt	101331	GCA_028878055.2	0.9541	0.9538	0.0248	0.9491	96681	92219	2515	2387
hg38.chr22_KI270877v1_alt	101331	GCA_028885625.2	0.9718	0.9593	0.0248	0.9627	98476	94468	2517	2423
hg38.chr22_KI270877v1_alt	101331	GCA_028885655.2	0.9721	0.9592	0.0248	0.9627	98508	94488	2518	2424
hg38.chr22_KI270877v1_alt	101331	GCA_029281585.2	0.9944	0.9792	0.0249	0.9802	100760	98665	2528	2478
hg38.chr22_KI270877v1_alt	101331	GCA_029289425.2	0.9943	0.9823	0.0248	0.9845	100757	98977	2514	2475
hg38.chr22_KI270877v1_alt	101331	hg38	1.0000	1.0000	0.0250	1.0000	101331	101331	2537	2537
hg38.chr22_KI270877v1_alt	101331	hs1	0.9988	0.9988	0.0250	0.9984	101208	101083	2537	2533
hg38.chr22_KI270878v1_alt	186262	GCA_028858775.2	0.8887	0.9637	0.0018	0.9825	165539	159522	342	336
hg38.chr22_KI270878v1_alt	186262	GCA_028878055.2	0.7112	0.9238	0.0000	0.5000	132477	122382	2	1
hg38.chr22_KI270878v1_alt	186262	GCA_028885625.2	0.7348	0.9364	0.0000	0.5000	136868	128165	2	1
hg38.chr22_KI270878v1_alt	186262	GCA_028885655.2	0.7313	0.9359	0.0000	0.5000	136218	127482	2	1
hg38.chr22_KI270878v1_alt	186262	GCA_029281585.2	0.8836	0.9789	0.0000	0.0000	164578	161113	0	0
hg38.chr22_KI270878v1_alt	186262	GCA_029289425.2	0.8833	0.9629	0.0000	1.0000	164531	158426	2	2
hg38.chr22_KI270878v1_alt	186262	hg38	1.0000	1.0000	0.0390	1.0000	186262	186262	7269	7269
hg38.chr22_KI270878v1_alt	186262	hs1	0.9690	0.9987	0.0090	0.9988	180490	180259	1685	1683
hg38.chr22_KI270879v1_alt	304135	GCA_028858775.2	0.9573	0.9879	0.1086	0.9861	291161	287629	33027	32568
hg38.chr22_KI270879v1_alt	304135	GCA_028878055.2	0.8896	0.9553	0.0895	0.9547	270551	258460	27235	26001
hg38.chr22_KI270879v1_alt	304135	GCA_028885625.2	0.8913	0.9643	0.0807	0.9533	271088	261421	24550	23404
hg38.chr22_KI270879v1_alt	304135	GCA_028885655.2	0.8710	0.9650	0.0512	0.9620	264896	255636	15563	14972
hg38.chr22_KI270879v1_alt	304135	GCA_029281585.2	0.9392	0.9818	0.0877	0.9786	285653	280448	26659	26088
hg38.chr22_KI270879v1_alt	304135	GCA_029289425.2	0.9605	0.9875	0.1086	0.9860	292122	288467	33027	32564
hg38.chr22_KI270879v1_alt	304135	hg38	1.0000	1.0000	0.1099	1.0000	304135	304135	33431	33431
hg38.chr22_KI270879v1_alt	304135	hs1	0.9649	0.9967	0.1098	0.9991	293448	292477	33401	33371
hg38.chr22_KI270928v1_alt	176103	GCA_028858775.2	0.9852	0.9895	0.0000	0.0000	173502	171676	0	0
hg38.chr22_KI270928v1_alt	176103	GCA_028878055.2	0.9437	0.9634	0.0000	0.0000	166195	160120	0	0
hg38.chr22_KI270928v1_alt	176103	GCA_028885625.2	0.9606	0.9662	0.0000	0.0000	169169	163457	0	0
hg38.chr22_KI270928v1_alt	176103	GCA_028885655.2	0.9227	0.9652	0.0000	0.0000	162487	156839	0	0
hg38.chr22_KI270928v1_alt	176103	GCA_029281585.2	0.9785	0.9822	0.0000	0.0000	172319	169244	0	0
hg38.chr22_KI270928v1_alt	176103	GCA_029289425.2	0.9838	0.9894	0.0000	0.0000	173246	171414	0	0
hg38.chr22_KI270928v1_alt	176103	hg38	1.0000	1.0000	0.0000	0.0000	176103	176103	0	0
hg38.chr22_KI270928v1_alt	176103	hs1	0.9993	0.9994	0.0000	0.0000	175983	175878	0	0
hg38.chr2_GL383521v1_alt	143390	GCA_028858775.2	0.9556	0.9864	0.0000	0.0000	137017	135154	0	0
hg38.chr2_GL383521v1_alt	143390	GCA_028878055.2	0.9453	0.9620	0.0000	0.0000	135543	130394	0	0
hg38.chr2_GL383521v1_alt	143390	GCA_028885625.2	0.9516	0.9668	0.0000	0.0000	136448	131922	0	0
hg38.chr2_GL383521v1_alt	143390	GCA_028885655.2	0.9516	0.9668	0.0000	0.0000	136448	131922	0	0
hg38.chr2_GL383521v1_alt	143390	GCA_029281585.2	0.9454	0.9822	0.0000	0.0000	135558	133149	0	0
hg38.chr2_GL383521v1_alt	143390	GCA_029289425.2	0.9556	0.9868	0.0000	0.0000	137029	135224	0	0
hg38.chr2_GL383521v1_alt	143390	hg38	1.0000	1.0000	0.0000	0.0000	143390	143390	0	0
hg38.chr2_GL383521v1_alt	143390	hs1	0.9573	0.9989	0.0000	0.0000	137266	137120	0	0
hg38.chr2_GL383522v1_alt	123821	GCA_028858775.2	0.9647	0.9877	0.0687	0.9880	119450	117977	8501	8399
hg38.chr2_GL383522v1_alt	123821	GCA_028878055.2	0.9807	0.9638	0.0910	0.9638	121430	117031	11264	10856
hg38.chr2_GL383522v1_alt	123821	GCA_028885625.2	0.9756	0.9660	0.0965	0.9620	120795	116688	11946	11492
hg38.chr2_GL383522v1_alt	123821	GCA_028885655.2	0.9756	0.9658	0.0965	0.9620	120794	116657	11948	11494
hg38.chr2_GL383522v1_alt	123821	GCA_029281585.2	0.9921	0.9838	0.0965	0.9825	122844	120854	11951	11742
hg38.chr2_GL383522v1_alt	123821	GCA_029289425.2	0.9746	0.9889	0.0787	0.9891	120670	119332	9746	9640
hg38.chr2_GL383522v1_alt	123821	hg38	1.0000	1.0000	0.0972	1.0000	123821	123821	12039	12039
hg38.chr2_GL383522v1_alt	123821	hs1	0.9995	0.9993	0.0972	0.9993	123760	123679	12033	12025
hg38.chr2_GL582966v2_alt	96131	GCA_028858775.2	0.9347	0.9901	0.0000	0.0000	89852	88966	0	0
hg38.chr2_GL582966v2_alt	96131	GCA_028878055.2	0.9282	0.9651	0.0000	0.0000	89226	86115	0	0
hg38.chr2_GL582966v2_alt	96131	GCA_028885625.2	0.9312	0.9722	0.0000	0.0000	89520	87029	0	0
hg38.chr2_GL582966v2_alt	96131	GCA_028885655.2	0.9312	0.9723	0.0000	0.0000	89514	87031	0	0
hg38.chr2_GL582966v2_alt	96131	GCA_029281585.2	0.9347	0.9875	0.0000	0.0000	89852	88733	0	0
hg38.chr2_GL582966v2_alt	96131	GCA_029289425.2	0.9344	0.9900	0.0000	0.0000	89825	88927	0	0
hg38.chr2_GL582966v2_alt	96131	hg38	1.0000	1.0000	0.0000	0.0000	96131	96131	0	0
hg38.chr2_GL582966v2_alt	96131	hs1	0.9367	0.9998	0.0000	0.0000	90044	90023	0	0
hg38.chr2_KI270767v1_alt	161578	GCA_028858775.2	0.8783	0.9861	0.0000	0.0000	141912	139935	0	0
hg38.chr2_KI270767v1_alt	161578	GCA_028878055.2	0.4226	0.9339	0.0000	0.0000	68286	63772	0	0
hg38.chr2_KI270767v1_alt	161578	GCA_028885625.2	0.8146	0.9578	0.0000	0.0000	131629	126068	0	0
hg38.chr2_KI270767v1_alt	161578	GCA_028885655.2	0.8148	0.9578	0.0000	0.0000	131652	126091	0	0
hg38.chr2_KI270767v1_alt	161578	GCA_029281585.2	0.8699	0.9786	0.0000	0.0000	140563	137558	0	0
hg38.chr2_KI270767v1_alt	161578	GCA_029289425.2	0.8914	0.9856	0.0000	0.0000	144033	141958	0	0
hg38.chr2_KI270767v1_alt	161578	hg38	1.0000	1.0000	0.0000	0.0000	161578	161578	0	0
hg38.chr2_KI270767v1_alt	161578	hs1	0.9585	0.9975	0.0000	0.0000	154875	154482	0	0
hg38.chr2_KI270768v1_alt	110099	GCA_028858775.2	0.9272	0.9892	0.0000	0.0000	102089	100983	0	0
hg38.chr2_KI270768v1_alt	110099	GCA_028878055.2	0.7522	0.9496	0.0000	0.0000	82814	78642	0	0
hg38.chr2_KI270768v1_alt	110099	GCA_028885625.2	0.8126	0.9745	0.0000	0.0000	89471	87192	0	0
hg38.chr2_KI270768v1_alt	110099	GCA_028885655.2	0.8125	0.9746	0.0000	0.0000	89459	87191	0	0
hg38.chr2_KI270768v1_alt	110099	GCA_029281585.2	0.8783	0.9853	0.0000	0.0000	96701	95279	0	0
hg38.chr2_KI270768v1_alt	110099	GCA_029289425.2	0.8996	0.9831	0.0000	0.0000	99043	97368	0	0
hg38.chr2_KI270768v1_alt	110099	hg38	1.0000	1.0000	0.0000	0.0000	110099	110099	0	0
hg38.chr2_KI270768v1_alt	110099	hs1	1.0000	0.9993	0.0000	0.0000	110097	110020	0	0
hg38.chr2_KI270769v1_alt	120616	GCA_028858775.2	0.9711	0.9842	0.0000	0.0000	117131	115283	0	0
hg38.chr2_KI270769v1_alt	120616	GCA_028878055.2	0.9432	0.9516	0.0000	0.0000	113760	108251	0	0
hg38.chr2_KI270769v1_alt	120616	GCA_028885625.2	0.9575	0.9595	0.0000	0.0000	115492	110816	0	0
hg38.chr2_KI270769v1_alt	120616	GCA_028885655.2	0.9572	0.9591	0.0000	0.0000	115457	110733	0	0
hg38.chr2_KI270769v1_alt	120616	GCA_029281585.2	0.9652	0.9805	0.0000	0.0000	116415	114142	0	0
hg38.chr2_KI270769v1_alt	120616	GCA_029289425.2	0.9687	0.9840	0.0000	0.0000	116841	114974	0	0
hg38.chr2_KI270769v1_alt	120616	hg38	1.0000	1.0000	0.0000	0.0000	120616	120616	0	0
hg38.chr2_KI270769v1_alt	120616	hs1	0.9798	0.9993	0.0000	0.0000	118174	118092	0	0
hg38.chr2_KI270770v1_alt	136240	GCA_028858775.2	0.8866	0.9819	0.0013	0.9438	120789	118598	178	168
hg38.chr2_KI270770v1_alt	136240	GCA_028885625.2	0.8816	0.9560	0.0015	0.8995	120107	114821	199	179
hg38.chr2_KI270770v1_alt	136240	GCA_028885655.2	0.8795	0.9565	0.0015	0.9146	119823	114610	199	182
hg38.chr2_KI270770v1_alt	136240	GCA_029281585.2	0.9218	0.9814	0.0012	0.9024	125580	123240	164	148
hg38.chr2_KI270770v1_alt	136240	GCA_029289425.2	0.8860	0.9819	0.0013	0.9494	120706	118523	178	169
hg38.chr2_KI270770v1_alt	136240	hg38	1.0000	1.0000	0.0015	1.0000	136240	136240	205	205
hg38.chr2_KI270770v1_alt	136240	hs1	0.9625	0.9977	0.0000	0.0000	131126	130818	0	0
hg38.chr2_KI270771v1_alt	110395	GCA_028858775.2	0.9619	0.9835	0.0146	0.9845	106192	104435	1608	1583
hg38.chr2_KI270771v1_alt	110395	GCA_028878055.2	0.8197	0.9548	0.0144	0.9591	90495	86409	1590	1525
hg38.chr2_KI270771v1_alt	110395	GCA_028885625.2	0.9159	0.9623	0.0145	0.9650	101113	97300	1601	1545
hg38.chr2_KI270771v1_alt	110395	GCA_028885655.2	0.9158	0.9622	0.0145	0.9644	101101	97284	1599	1542
hg38.chr2_KI270771v1_alt	110395	GCA_029281585.2	0.7917	0.9799	0.0146	0.9764	87398	85638	1607	1569
hg38.chr2_KI270771v1_alt	110395	GCA_029289425.2	0.9608	0.9833	0.0145	0.9832	106068	104299	1603	1576
hg38.chr2_KI270771v1_alt	110395	hg38	1.0000	1.0000	0.0147	1.0000	110395	110395	1618	1618
hg38.chr2_KI270771v1_alt	110395	hs1	0.9692	0.9989	0.0000	0.0000	106995	106879	0	0
hg38.chr2_KI270772v1_alt	133041	GCA_028858775.2	0.5787	0.9819	0.0007	0.8523	76995	75601	88	75
hg38.chr2_KI270772v1_alt	133041	GCA_028878055.2	0.3073	0.9628	0.0000	0.0000	40880	39361	0	0
hg38.chr2_KI270772v1_alt	133041	GCA_028885625.2	0.4573	0.9663	0.0000	0.0000	60834	58786	0	0
hg38.chr2_KI270772v1_alt	133041	GCA_028885655.2	0.4382	0.9666	0.0000	0.0000	58298	56349	0	0
hg38.chr2_KI270772v1_alt	133041	GCA_029281585.2	0.5440	0.9699	0.0006	0.8625	72378	70200	80	69
hg38.chr2_KI270772v1_alt	133041	GCA_029289425.2	0.5786	0.9824	0.0007	0.8636	76973	75618	88	76
hg38.chr2_KI270772v1_alt	133041	hg38	1.0000	1.0000	0.1656	1.0000	133041	133041	22027	22027
hg38.chr2_KI270772v1_alt	133041	hs1	0.9919	0.9944	0.1591	0.9986	131963	131221	21172	21143
hg38.chr2_KI270773v1_alt	70887	GCA_028858775.2	0.9136	0.9813	0.0027	0.9067	64763	63553	193	175
hg38.chr2_KI270773v1_alt	70887	GCA_028878055.2	0.8898	0.9529	0.0013	0.7935	63072	60101	92	73
hg38.chr2_KI270773v1_alt	70887	GCA_028885625.2	0.9016	0.9576	0.0012	0.8966	63913	61200	87	78
hg38.chr2_KI270773v1_alt	70887	GCA_028885655.2	0.9022	0.9575	0.0016	0.8919	63954	61236	111	99
hg38.chr2_KI270773v1_alt	70887	GCA_029281585.2	0.9464	0.9726	0.0027	0.8814	67089	65253	194	171
hg38.chr2_KI270773v1_alt	70887	GCA_029289425.2	0.9173	0.9816	0.0052	0.9428	65025	63830	367	346
hg38.chr2_KI270773v1_alt	70887	hg38	1.0000	1.0000	0.0110	1.0000	70887	70887	782	782
hg38.chr2_KI270773v1_alt	70887	hs1	0.9916	0.9950	0.0110	0.9731	70290	69941	782	761
hg38.chr2_KI270774v1_alt	223625	GCA_028858775.2	0.9140	0.9714	0.0020	0.8858	204390	198546	438	388
hg38.chr2_KI270774v1_alt	223625	GCA_028878055.2	0.8235	0.9430	0.0013	0.9007	184148	173649	282	254
hg38.chr2_KI270774v1_alt	223625	GCA_028885625.2	0.8559	0.9508	0.0013	0.8767	191411	182002	300	263
hg38.chr2_KI270774v1_alt	223625	GCA_028885655.2	0.8558	0.9504	0.0013	0.8767	191379	181884	300	263
hg38.chr2_KI270774v1_alt	223625	GCA_029281585.2	0.8872	0.9701	0.0006	0.8571	198401	192461	133	114
hg38.chr2_KI270774v1_alt	223625	GCA_029289425.2	0.9145	0.9728	0.0014	0.8789	204495	198926	322	283
hg38.chr2_KI270774v1_alt	223625	hg38	1.0000	1.0000	0.0198	1.0000	223625	223625	4427	4427
hg38.chr2_KI270774v1_alt	223625	hs1	0.9715	0.9943	0.0018	1.0000	217251	216020	396	396
hg38.chr2_KI270775v1_alt	138019	GCA_028858775.2	0.9955	0.9805	0.0377	0.9798	137397	134723	5206	5101
hg38.chr2_KI270775v1_alt	138019	GCA_028878055.2	0.6926	0.9523	0.0376	0.9519	95587	91024	5196	4946
hg38.chr2_KI270775v1_alt	138019	GCA_028885625.2	0.9551	0.9605	0.0377	0.9597	131818	126616	5208	4998
hg38.chr2_KI270775v1_alt	138019	GCA_028885655.2	0.9554	0.9604	0.0377	0.9593	131859	126636	5207	4995
hg38.chr2_KI270775v1_alt	138019	GCA_029281585.2	0.9923	0.9789	0.0377	0.9787	136959	134075	5209	5098
hg38.chr2_KI270775v1_alt	138019	GCA_029289425.2	0.9955	0.9814	0.0377	0.9785	137398	134844	5206	5094
hg38.chr2_KI270775v1_alt	138019	hg38	1.0000	1.0000	0.0378	1.0000	138019	138019	5223	5223
hg38.chr2_KI270775v1_alt	138019	hs1	0.9999	0.9996	0.0378	0.9994	137999	137945	5223	5220
hg38.chr2_KI270776v1_alt	174166	GCA_028858775.2	0.6141	0.9795	0.0000	0.0000	106956	104759	0	0
hg38.chr2_KI270776v1_alt	174166	GCA_028878055.2	0.6718	0.9459	0.0000	0.0000	117011	110678	0	0
hg38.chr2_KI270776v1_alt	174166	GCA_028885625.2	0.8666	0.9523	0.0000	0.0000	150927	143725	0	0
hg38.chr2_KI270776v1_alt	174166	GCA_028885655.2	0.8686	0.9524	0.0000	0.0000	151287	144080	0	0
hg38.chr2_KI270776v1_alt	174166	GCA_029281585.2	0.7561	0.9766	0.0000	0.0000	131695	128609	0	0
hg38.chr2_KI270776v1_alt	174166	GCA_029289425.2	0.6296	0.9802	0.0000	0.0000	109658	107492	0	0
hg38.chr2_KI270776v1_alt	174166	hg38	1.0000	1.0000	0.0000	0.0000	174166	174166	0	0
hg38.chr2_KI270776v1_alt	174166	hs1	0.9778	0.9980	0.0000	0.0000	170305	169972	0	0
hg38.chr2_KI270893v1_alt	161218	GCA_028858775.2	0.8797	0.9860	0.0000	0.0000	141825	139845	0	0
hg38.chr2_KI270893v1_alt	161218	GCA_028878055.2	0.4235	0.9339	0.0000	0.0000	68280	63767	0	0
hg38.chr2_KI270893v1_alt	161218	GCA_028885625.2	0.8170	0.9577	0.0000	0.0000	131711	126135	0	0
hg38.chr2_KI270893v1_alt	161218	GCA_028885655.2	0.8171	0.9577	0.0000	0.0000	131734	126159	0	0
hg38.chr2_KI270893v1_alt	161218	GCA_029281585.2	0.8719	0.9787	0.0000	0.0000	140568	137568	0	0
hg38.chr2_KI270893v1_alt	161218	GCA_029289425.2	0.8926	0.9856	0.0000	0.0000	143908	141835	0	0
hg38.chr2_KI270893v1_alt	161218	hg38	1.0000	1.0000	0.0000	0.0000	161218	161218	0	0
hg38.chr2_KI270893v1_alt	161218	hs1	0.9608	0.9972	0.0000	0.0000	154894	154464	0	0
hg38.chr2_KI270894v1_alt	214158	GCA_028858775.2	0.6195	0.9689	0.0000	0.0000	132676	128553	0	0
hg38.chr2_KI270894v1_alt	214158	GCA_028878055.2	0.1978	0.9597	0.0000	0.0000	42362	40653	0	0
hg38.chr2_KI270894v1_alt	214158	GCA_028885625.2	0.2948	0.9637	0.0000	0.0000	63142	60853	0	0
hg38.chr2_KI270894v1_alt	214158	GCA_028885655.2	0.2948	0.9640	0.0000	0.0000	63144	60871	0	0
hg38.chr2_KI270894v1_alt	214158	GCA_029281585.2	0.4896	0.9570	0.0000	0.0000	104857	100351	0	0
hg38.chr2_KI270894v1_alt	214158	GCA_029289425.2	0.7361	0.9672	0.0000	0.0000	157640	152469	0	0
hg38.chr2_KI270894v1_alt	214158	hg38	1.0000	1.0000	0.0000	0.0000	214158	214158	0	0
hg38.chr2_KI270894v1_alt	214158	hs1	0.8621	0.9897	0.0000	0.0000	184630	182727	0	0
hg38.chr3	198295559	GCA_028858775.2	0.9700	0.9868	0.9450	0.9868	192353427	189808686	187398285	184919918
hg38.chr3	198295559	GCA_028878055.2	0.9085	0.9614	0.8782	0.9616	180142055	173184995	174138737	167449507
hg38.chr3	198295559	GCA_028885625.2	0.9424	0.9673	0.9131	0.9673	186879350	180766450	181058237	175143824
hg38.chr3	198295559	GCA_028885655.2	0.9424	0.9673	0.9123	0.9674	186868761	180762675	180899351	174994002
hg38.chr3	198295559	GCA_029281585.2	0.9649	0.9833	0.9396	0.9833	191330168	188133662	186311526	183204579
hg38.chr3	198295559	GCA_029289425.2	0.9692	0.9868	0.9427	0.9868	192185296	189641604	186942881	184469828
hg38.chr3	198295559	hg38	0.9949	1.0000	0.9727	1.0000	197290930	197290930	192874024	192874024
hg38.chr3	198295559	hs1	0.9851	0.9989	0.9621	0.9989	195336884	195120422	190777807	190568557
hg38.chr3_GL000221v1_random	155397	GCA_028858775.2	0.8106	0.9855	0.0000	0.0000	125966	124138	0	0
hg38.chr3_GL000221v1_random	155397	GCA_028878055.2	0.6024	0.9482	0.0000	0.0000	93616	88770	0	0
hg38.chr3_GL000221v1_random	155397	GCA_028885625.2	0.6129	0.9585	0.0000	0.0000	95240	91290	0	0
hg38.chr3_GL000221v1_random	155397	GCA_028885655.2	0.6117	0.9573	0.0000	0.0000	95055	90997	0	0
hg38.chr3_GL000221v1_random	155397	GCA_029281585.2	0.6959	0.9786	0.0000	0.0000	108138	105829	0	0
hg38.chr3_GL000221v1_random	155397	GCA_029289425.2	0.8104	0.9852	0.0000	0.0000	125939	124075	0	0
hg38.chr3_GL000221v1_random	155397	hg38	1.0000	1.0000	0.0273	1.0000	155397	155397	4237	4237
hg38.chr3_GL000221v1_random	155397	hs1	0.9996	0.9987	0.0267	0.9908	155342	155146	4144	4106
hg38.chr3_GL383526v1_alt	180671	GCA_028858775.2	0.9959	0.9874	0.0545	0.9825	179933	177663	9841	9669
hg38.chr3_GL383526v1_alt	180671	GCA_028878055.2	0.8169	0.9596	0.0381	0.9619	147582	141613	6880	6618
hg38.chr3_GL383526v1_alt	180671	GCA_028885625.2	0.8624	0.9678	0.0523	0.9632	155819	150806	9453	9105
hg38.chr3_GL383526v1_alt	180671	GCA_028885655.2	0.8626	0.9683	0.0524	0.9644	155850	150911	9462	9125
hg38.chr3_GL383526v1_alt	180671	GCA_029281585.2	0.9938	0.9856	0.0537	0.9803	179559	176973	9698	9507
hg38.chr3_GL383526v1_alt	180671	GCA_029289425.2	0.9949	0.9872	0.0537	0.9812	179755	177453	9697	9515
hg38.chr3_GL383526v1_alt	180671	hg38	1.0000	1.0000	0.0555	1.0000	180671	180671	10028	10028
hg38.chr3_GL383526v1_alt	180671	hs1	0.9993	0.9986	0.0555	0.9988	180544	180295	10027	10015
hg38.chr3_JH636055v2_alt	173151	GCA_028858775.2	0.9704	0.9842	0.0001	0.9565	168023	165360	23	22
hg38.chr3_JH636055v2_alt	173151	GCA_028878055.2	0.8786	0.9545	0.0000	0.0000	152127	145205	0	0
hg38.chr3_JH636055v2_alt	173151	GCA_028885625.2	0.9441	0.9643	0.0001	0.9412	163474	157639	17	16
hg38.chr3_JH636055v2_alt	173151	GCA_028885655.2	0.9440	0.9645	0.0001	0.9412	163457	157653	17	16
hg38.chr3_JH636055v2_alt	173151	GCA_029281585.2	0.9373	0.9821	0.0001	1.0000	162298	159394	23	23
hg38.chr3_JH636055v2_alt	173151	GCA_029289425.2	0.9708	0.9842	0.0001	1.0000	168094	165432	23	23
hg38.chr3_JH636055v2_alt	173151	hg38	1.0000	1.0000	0.0001	1.0000	173151	173151	24	24
hg38.chr3_JH636055v2_alt	173151	hs1	0.9988	0.9984	0.0001	1.0000	172938	172659	23	23
hg38.chr3_KI270777v1_alt	173649	GCA_028858775.2	0.9914	0.9893	0.0149	0.9888	172156	170313	2591	2562
hg38.chr3_KI270777v1_alt	173649	GCA_028878055.2	0.9664	0.9641	0.0149	0.9617	167814	161782	2588	2489
hg38.chr3_KI270777v1_alt	173649	GCA_028885625.2	0.9459	0.9694	0.0149	0.9710	164257	159226	2582	2507
hg38.chr3_KI270777v1_alt	173649	GCA_028885655.2	0.9463	0.9694	0.0149	0.9702	164326	159298	2585	2508
hg38.chr3_KI270777v1_alt	173649	GCA_029281585.2	0.9805	0.9852	0.0148	0.9860	170267	167751	2575	2539
hg38.chr3_KI270777v1_alt	173649	GCA_029289425.2	0.9912	0.9891	0.0149	0.9880	172128	170255	2591	2560
hg38.chr3_KI270777v1_alt	173649	hg38	1.0000	1.0000	0.0149	1.0000	173649	173649	2594	2594
hg38.chr3_KI270777v1_alt	173649	hs1	0.9996	0.9988	0.0149	0.9992	173576	173363	2594	2592
hg38.chr3_KI270778v1_alt	248252	GCA_028858775.2	0.9451	0.9864	0.0061	0.9921	234619	231418	1516	1504
hg38.chr3_KI270778v1_alt	248252	GCA_028878055.2	0.7581	0.9572	0.0052	0.9700	188194	180144	1299	1260
hg38.chr3_KI270778v1_alt	248252	GCA_028885625.2	0.9109	0.9624	0.0053	0.9678	226122	217614	1306	1264
hg38.chr3_KI270778v1_alt	248252	GCA_028885655.2	0.9110	0.9627	0.0053	0.9678	226149	217714	1306	1264
hg38.chr3_KI270778v1_alt	248252	GCA_029281585.2	0.9475	0.9819	0.0061	0.9769	235209	230955	1516	1481
hg38.chr3_KI270778v1_alt	248252	GCA_029289425.2	0.9454	0.9865	0.0061	0.9921	234706	231527	1516	1504
hg38.chr3_KI270778v1_alt	248252	hg38	1.0000	1.0000	0.0061	1.0000	248252	248252	1516	1516
hg38.chr3_KI270778v1_alt	248252	hs1	0.9800	0.9985	0.0000	0.0000	243291	242936	0	0
hg38.chr3_KI270779v1_alt	205312	GCA_028858775.2	0.9326	0.9715	0.0003	0.9245	191473	186022	53	49
hg38.chr3_KI270779v1_alt	205312	GCA_028878055.2	0.7385	0.9483	0.0000	0.0000	151627	143794	0	0
hg38.chr3_KI270779v1_alt	205312	GCA_028885625.2	0.7316	0.9616	0.0000	0.0000	150210	144438	0	0
hg38.chr3_KI270779v1_alt	205312	GCA_028885655.2	0.7337	0.9615	0.0000	0.0000	150637	144841	0	0
hg38.chr3_KI270779v1_alt	205312	GCA_029281585.2	0.9202	0.9699	0.0003	0.8679	188924	183246	53	46
hg38.chr3_KI270779v1_alt	205312	GCA_029289425.2	0.9367	0.9727	0.0003	0.9434	192324	187080	53	50
hg38.chr3_KI270779v1_alt	205312	hg38	1.0000	1.0000	0.0003	1.0000	205312	205312	59	59
hg38.chr3_KI270779v1_alt	205312	hs1	0.9763	0.9938	0.0000	1.0000	200439	199203	6	6
hg38.chr3_KI270780v1_alt	224108	GCA_028858775.2	0.8312	0.9805	0.0000	0.0000	186287	182647	0	0
hg38.chr3_KI270780v1_alt	224108	GCA_028878055.2	0.4939	0.9488	0.0000	0.0000	110696	105023	0	0
hg38.chr3_KI270780v1_alt	224108	GCA_028885625.2	0.6391	0.9565	0.0000	0.0000	143224	136992	0	0
hg38.chr3_KI270780v1_alt	224108	GCA_028885655.2	0.6392	0.9591	0.0000	0.0000	143245	137383	0	0
hg38.chr3_KI270780v1_alt	224108	GCA_029281585.2	0.7322	0.9745	0.0000	0.0000	164087	159907	0	0
hg38.chr3_KI270780v1_alt	224108	GCA_029289425.2	0.8314	0.9800	0.0000	0.0000	186325	182596	0	0
hg38.chr3_KI270780v1_alt	224108	hg38	1.0000	1.0000	0.0000	0.0000	224108	224108	0	0
hg38.chr3_KI270780v1_alt	224108	hs1	0.9998	0.9991	0.0000	0.0000	224066	223854	0	0
hg38.chr3_KI270781v1_alt	113034	GCA_028858775.2	0.9947	0.9838	0.0426	0.9877	112433	110611	4815	4756
hg38.chr3_KI270781v1_alt	113034	GCA_028878055.2	0.7846	0.9553	0.0000	0.0000	88688	84721	0	0
hg38.chr3_KI270781v1_alt	113034	GCA_028885625.2	0.9508	0.9598	0.0424	0.9629	107478	103153	4795	4617
hg38.chr3_KI270781v1_alt	113034	GCA_028885655.2	0.9507	0.9602	0.0424	0.9631	107458	103177	4797	4620
hg38.chr3_KI270781v1_alt	113034	GCA_029281585.2	0.9471	0.9803	0.0426	0.9817	107055	104947	4817	4729
hg38.chr3_KI270781v1_alt	113034	GCA_029289425.2	0.9932	0.9844	0.0426	0.9873	112266	110514	4815	4754
hg38.chr3_KI270781v1_alt	113034	hg38	1.0000	1.0000	0.0426	1.0000	113034	113034	4819	4819
hg38.chr3_KI270781v1_alt	113034	hs1	0.9995	0.9976	0.0426	0.9990	112977	112701	4818	4813
hg38.chr3_KI270782v1_alt	162429	GCA_028858775.2	0.9591	0.9855	0.0001	1.0000	155789	153523	17	17
hg38.chr3_KI270782v1_alt	162429	GCA_028878055.2	0.8864	0.9501	0.0011	0.8538	143984	136804	171	146
hg38.chr3_KI270782v1_alt	162429	GCA_028885625.2	0.9384	0.9581	0.0003	0.9091	152422	146030	55	50
hg38.chr3_KI270782v1_alt	162429	GCA_028885655.2	0.9382	0.9580	0.0003	0.9091	152388	145983	55	50
hg38.chr3_KI270782v1_alt	162429	GCA_029281585.2	0.9628	0.9779	0.0012	0.9175	156391	152939	194	178
hg38.chr3_KI270782v1_alt	162429	GCA_029289425.2	0.9615	0.9852	0.0014	0.9244	156168	153852	225	208
hg38.chr3_KI270782v1_alt	162429	hg38	1.0000	1.0000	0.0014	1.0000	162429	162429	226	226
hg38.chr3_KI270782v1_alt	162429	hs1	0.9894	0.9995	0.0014	1.0000	160709	160636	226	226
hg38.chr3_KI270783v1_alt	109187	GCA_028858775.2	0.7816	0.9869	0.0799	0.9896	85342	84226	8725	8634
hg38.chr3_KI270783v1_alt	109187	GCA_028878055.2	0.7653	0.9609	0.0796	0.9642	83565	80297	8688	8377
hg38.chr3_KI270783v1_alt	109187	GCA_028885625.2	0.7644	0.9701	0.0798	0.9691	83458	80960	8711	8442
hg38.chr3_KI270783v1_alt	109187	GCA_028885655.2	0.7646	0.9700	0.0798	0.9684	83482	80980	8711	8436
hg38.chr3_KI270783v1_alt	109187	GCA_029281585.2	0.8157	0.9859	0.0799	0.9864	89060	87807	8723	8604
hg38.chr3_KI270783v1_alt	109187	GCA_029289425.2	0.8181	0.9869	0.0799	0.9898	89324	88153	8724	8635
hg38.chr3_KI270783v1_alt	109187	hg38	0.8228	1.0000	0.0800	1.0000	89836	89836	8733	8733
hg38.chr3_KI270783v1_alt	109187	hs1	0.8227	0.9986	0.0800	0.9992	89830	89701	8733	8726
hg38.chr3_KI270784v1_alt	184404	GCA_028858775.2	0.9262	0.9859	0.0000	0.0000	170802	168400	0	0
hg38.chr3_KI270784v1_alt	184404	GCA_028878055.2	0.5479	0.9463	0.0000	0.0000	101036	95611	0	0
hg38.chr3_KI270784v1_alt	184404	GCA_028885625.2	0.6689	0.9611	0.0000	0.0000	123345	118550	0	0
hg38.chr3_KI270784v1_alt	184404	GCA_028885655.2	0.6676	0.9614	0.0000	0.0000	123102	118352	0	0
hg38.chr3_KI270784v1_alt	184404	GCA_029281585.2	0.8195	0.9785	0.0000	0.0000	151120	147876	0	0
hg38.chr3_KI270784v1_alt	184404	GCA_029289425.2	0.9308	0.9861	0.0000	0.0000	171641	169251	0	0
hg38.chr3_KI270784v1_alt	184404	hg38	1.0000	1.0000	0.0000	0.0000	184404	184404	0	0
hg38.chr3_KI270784v1_alt	184404	hs1	0.9993	0.9987	0.0000	0.0000	184275	184041	0	0
hg38.chr3_KI270895v1_alt	162896	GCA_028858775.2	0.9524	0.9735	0.0000	0.0000	155137	151023	0	0
hg38.chr3_KI270895v1_alt	162896	GCA_028878055.2	0.7425	0.9507	0.0000	0.0000	120956	114993	0	0
hg38.chr3_KI270895v1_alt	162896	GCA_028885625.2	0.8029	0.9632	0.0000	0.0000	130784	125977	0	0
hg38.chr3_KI270895v1_alt	162896	GCA_028885655.2	0.8038	0.9631	0.0000	0.0000	130929	126095	0	0
hg38.chr3_KI270895v1_alt	162896	GCA_029281585.2	0.9443	0.9721	0.0000	0.0000	153830	149541	0	0
hg38.chr3_KI270895v1_alt	162896	GCA_029289425.2	0.9504	0.9747	0.0000	0.0000	154821	150903	0	0
hg38.chr3_KI270895v1_alt	162896	hg38	1.0000	1.0000	0.0000	0.0000	162896	162896	0	0
hg38.chr3_KI270895v1_alt	162896	hs1	0.9821	0.9927	0.0000	0.0000	159973	158807	0	0
hg38.chr3_KI270924v1_alt	166540	GCA_028858775.2	0.9481	0.9726	0.0042	0.9182	157891	153570	697	640
hg38.chr3_KI270924v1_alt	166540	GCA_028878055.2	0.7312	0.9501	0.0008	0.6119	121769	115689	134	82
hg38.chr3_KI270924v1_alt	166540	GCA_028885625.2	0.7916	0.9628	0.0000	0.0000	131839	126939	0	0
hg38.chr3_KI270924v1_alt	166540	GCA_028885655.2	0.7941	0.9625	0.0002	0.9756	132256	127296	41	40
hg38.chr3_KI270924v1_alt	166540	GCA_029281585.2	0.9298	0.9718	0.0026	0.9048	154850	150481	441	399
hg38.chr3_KI270924v1_alt	166540	GCA_029289425.2	0.9467	0.9738	0.0035	0.9336	157669	153535	587	548
hg38.chr3_KI270924v1_alt	166540	hg38	1.0000	1.0000	0.0042	1.0000	166540	166540	701	701
hg38.chr3_KI270924v1_alt	166540	hs1	0.9734	0.9928	0.0040	0.9985	162109	160948	663	662
hg38.chr3_KI270934v1_alt	163458	GCA_028858775.2	0.9518	0.9734	0.0000	0.0000	155583	151440	0	0
hg38.chr3_KI270934v1_alt	163458	GCA_028878055.2	0.7390	0.9508	0.0000	0.0000	120799	114853	0	0
hg38.chr3_KI270934v1_alt	163458	GCA_028885625.2	0.8006	0.9633	0.0000	0.0000	130866	126057	0	0
hg38.chr3_KI270934v1_alt	163458	GCA_028885655.2	0.8033	0.9630	0.0000	0.0000	131311	126451	0	0
hg38.chr3_KI270934v1_alt	163458	GCA_029281585.2	0.9415	0.9721	0.0000	0.0000	153895	149601	0	0
hg38.chr3_KI270934v1_alt	163458	GCA_029289425.2	0.9500	0.9746	0.0000	0.0000	155282	151339	0	0
hg38.chr3_KI270934v1_alt	163458	hg38	1.0000	1.0000	0.0000	0.0000	163458	163458	0	0
hg38.chr3_KI270934v1_alt	163458	hs1	0.9821	0.9926	0.0000	0.0000	160533	159348	0	0
hg38.chr3_KI270935v1_alt	197351	GCA_028858775.2	0.9350	0.9741	0.0000	0.0000	184525	179751	0	0
hg38.chr3_KI270935v1_alt	197351	GCA_028878055.2	0.7475	0.9495	0.0000	0.0000	147528	140071	0	0
hg38.chr3_KI270935v1_alt	197351	GCA_028885625.2	0.7591	0.9618	0.0000	0.0000	149805	144081	0	0
hg38.chr3_KI270935v1_alt	197351	GCA_028885655.2	0.7612	0.9617	0.0000	0.0000	150232	144484	0	0
hg38.chr3_KI270935v1_alt	197351	GCA_029281585.2	0.9237	0.9725	0.0000	0.0000	182299	177288	0	0
hg38.chr3_KI270935v1_alt	197351	GCA_029289425.2	0.9393	0.9748	0.0000	0.0000	185379	180712	0	0
hg38.chr3_KI270935v1_alt	197351	hg38	1.0000	1.0000	0.0000	0.0000	197351	197351	0	0
hg38.chr3_KI270935v1_alt	197351	hs1	0.9814	0.9935	0.0000	0.0000	193672	192418	0	0
hg38.chr3_KI270936v1_alt	164170	GCA_028858775.2	0.9489	0.9731	0.0000	0.0000	155776	151588	0	0
hg38.chr3_KI270936v1_alt	164170	GCA_028878055.2	0.7358	0.9506	0.0000	0.0000	120799	114832	0	0
hg38.chr3_KI270936v1_alt	164170	GCA_028885625.2	0.7980	0.9632	0.0000	0.0000	131011	126196	0	0
hg38.chr3_KI270936v1_alt	164170	GCA_028885655.2	0.8007	0.9629	0.0000	0.0000	131457	126580	0	0
hg38.chr3_KI270936v1_alt	164170	GCA_029281585.2	0.9357	0.9720	0.0000	0.0000	153613	149317	0	0
hg38.chr3_KI270936v1_alt	164170	GCA_029289425.2	0.9475	0.9742	0.0000	0.0000	155551	151543	0	0
hg38.chr3_KI270936v1_alt	164170	hg38	1.0000	1.0000	0.0000	0.0000	164170	164170	0	0
hg38.chr3_KI270936v1_alt	164170	hs1	0.9755	0.9921	0.0000	0.0000	160152	158881	0	0
hg38.chr3_KI270937v1_alt	165607	GCA_028858775.2	0.9429	0.9732	0.0000	0.0000	156155	151970	0	0
hg38.chr3_KI270937v1_alt	165607	GCA_028878055.2	0.7295	0.9507	0.0000	0.0000	120803	114849	0	0
hg38.chr3_KI270937v1_alt	165607	GCA_028885625.2	0.7929	0.9632	0.0000	0.0000	131310	126472	0	0
hg38.chr3_KI270937v1_alt	165607	GCA_028885655.2	0.7957	0.9629	0.0000	0.0000	131769	126874	0	0
hg38.chr3_KI270937v1_alt	165607	GCA_029281585.2	0.9284	0.9720	0.0000	0.0000	153754	149452	0	0
hg38.chr3_KI270937v1_alt	165607	GCA_029289425.2	0.9411	0.9743	0.0000	0.0000	155854	151854	0	0
hg38.chr3_KI270937v1_alt	165607	hg38	1.0000	1.0000	0.0000	0.0000	165607	165607	0	0
hg38.chr3_KI270937v1_alt	165607	hs1	0.9681	0.9918	0.0000	0.0000	160329	159009	0	0
hg38.chr4	190214555	GCA_028858775.2	0.9659	0.9864	0.9298	0.9865	183727395	181226297	176869669	174473993
hg38.chr4	190214555	GCA_028878055.2	0.8897	0.9606	0.8536	0.9609	169228585	162557405	162360533	156019044
hg38.chr4	190214555	GCA_028885625.2	0.9380	0.9663	0.8976	0.9663	178430458	172410324	170740587	164990871
hg38.chr4	190214555	GCA_028885655.2	0.9387	0.9663	0.8987	0.9663	178545748	172523073	170943262	165187116
hg38.chr4	190214555	GCA_029281585.2	0.9623	0.9829	0.9246	0.9830	183047892	179921637	175867892	172878293
hg38.chr4	190214555	GCA_029289425.2	0.9656	0.9864	0.9292	0.9865	183677144	181180110	176744130	174351770
hg38.chr4	190214555	hg38	0.9933	1.0000	0.9596	1.0000	188946365	188946365	182522646	182522646
hg38.chr4	190214555	hs1	0.9864	0.9988	0.9521	0.9988	187634753	187404407	181106001	180894358
hg38.chr4_GL000008v2_random	209709	GCA_028858775.2	0.8447	0.9851	0.0003	0.5424	177133	174502	59	32
hg38.chr4_GL000008v2_random	209709	GCA_028878055.2	0.5548	0.9432	0.0000	0.0000	116347	109736	0	0
hg38.chr4_GL000008v2_random	209709	GCA_028885625.2	0.5657	0.9593	0.0000	0.0000	118627	113796	0	0
hg38.chr4_GL000008v2_random	209709	GCA_028885655.2	0.5653	0.9577	0.0000	0.0000	118551	113537	0	0
hg38.chr4_GL000008v2_random	209709	GCA_029281585.2	0.6843	0.9698	0.0000	1.0000	143494	139164	2	2
hg38.chr4_GL000008v2_random	209709	GCA_029289425.2	0.8446	0.9856	0.0002	0.8250	177119	174571	40	33
hg38.chr4_GL000008v2_random	209709	hg38	1.0000	1.0000	0.0425	1.0000	209709	209709	8904	8904
hg38.chr4_GL000008v2_random	209709	hs1	0.9985	0.9999	0.0112	1.0000	209402	209378	2350	2350
hg38.chr4_GL000257v2_alt	586476	GCA_028858775.2	0.9151	0.9828	0.0000	0.0000	536704	527487	0	0
hg38.chr4_GL000257v2_alt	586476	GCA_028878055.2	0.6048	0.9510	0.0000	0.0000	354695	337329	0	0
hg38.chr4_GL000257v2_alt	586476	GCA_028885625.2	0.7982	0.9630	0.0000	0.0000	468116	450815	0	0
hg38.chr4_GL000257v2_alt	586476	GCA_028885655.2	0.7997	0.9629	0.0000	0.0000	468986	451589	0	0
hg38.chr4_GL000257v2_alt	586476	GCA_029281585.2	0.8921	0.9814	0.0000	0.0000	523178	513464	0	0
hg38.chr4_GL000257v2_alt	586476	GCA_029289425.2	0.9457	0.9829	0.0000	0.0000	554619	545114	0	0
hg38.chr4_GL000257v2_alt	586476	hg38	1.0000	1.0000	0.0000	0.0000	586476	586476	0	0
hg38.chr4_GL000257v2_alt	586476	hs1	0.9988	0.9983	0.0000	0.0000	585747	584756	0	0
hg38.chr4_GL383527v1_alt	164536	GCA_028858775.2	0.9916	0.9879	0.2546	0.9866	163160	161190	41885	41323
hg38.chr4_GL383527v1_alt	164536	GCA_028878055.2	0.9342	0.9589	0.2475	0.9563	153705	147393	40720	38941
hg38.chr4_GL383527v1_alt	164536	GCA_028885625.2	0.9811	0.9663	0.2497	0.9653	161434	155988	41081	39656
hg38.chr4_GL383527v1_alt	164536	GCA_028885655.2	0.9767	0.9664	0.2453	0.9651	160705	155309	40353	38943
hg38.chr4_GL383527v1_alt	164536	GCA_029281585.2	0.9862	0.9830	0.2548	0.9806	162270	159519	41916	41104
hg38.chr4_GL383527v1_alt	164536	GCA_029289425.2	0.9920	0.9879	0.2550	0.9866	163219	161252	41950	41387
hg38.chr4_GL383527v1_alt	164536	hg38	1.0000	1.0000	0.2569	1.0000	164536	164536	42275	42275
hg38.chr4_GL383527v1_alt	164536	hs1	0.9992	0.9980	0.2569	0.9986	164409	164077	42272	42211
hg38.chr4_GL383528v1_alt	376187	GCA_028858775.2	0.9372	0.9861	0.0000	0.0000	352561	347647	0	0
hg38.chr4_GL383528v1_alt	376187	GCA_028878055.2	0.7419	0.9560	0.0000	0.0000	279103	266829	0	0
hg38.chr4_GL383528v1_alt	376187	GCA_028885625.2	0.9071	0.9621	0.0000	0.0000	341230	328288	0	0
hg38.chr4_GL383528v1_alt	376187	GCA_028885655.2	0.9236	0.9622	0.0000	0.0000	347430	334290	0	0
hg38.chr4_GL383528v1_alt	376187	GCA_029281585.2	0.9207	0.9813	0.0000	0.0000	346349	339882	0	0
hg38.chr4_GL383528v1_alt	376187	GCA_029289425.2	0.9370	0.9859	0.0000	0.0000	352498	347539	0	0
hg38.chr4_GL383528v1_alt	376187	hg38	1.0000	1.0000	0.0000	0.0000	376187	376187	0	0
hg38.chr4_GL383528v1_alt	376187	hs1	0.9983	0.9986	0.0000	0.0000	375543	375029	0	0
hg38.chr4_KI270785v1_alt	119912	GCA_028858775.2	0.9470	0.9833	0.0015	0.9486	113560	111661	175	166
hg38.chr4_KI270785v1_alt	119912	GCA_028878055.2	0.9359	0.9561	0.0010	0.9145	112231	107301	117	107
hg38.chr4_KI270785v1_alt	119912	GCA_028885625.2	0.9379	0.9644	0.0013	0.9299	112461	108461	157	146
hg38.chr4_KI270785v1_alt	119912	GCA_028885655.2	0.9346	0.9641	0.0013	0.9363	112073	108048	157	147
hg38.chr4_KI270785v1_alt	119912	GCA_029281585.2	0.9450	0.9810	0.0012	0.9500	113316	111163	140	133
hg38.chr4_KI270785v1_alt	119912	GCA_029289425.2	0.9534	0.9827	0.0022	0.9440	114320	112346	268	253
hg38.chr4_KI270785v1_alt	119912	hg38	1.0000	1.0000	0.0022	1.0000	119912	119912	268	268
hg38.chr4_KI270785v1_alt	119912	hs1	0.9632	0.9975	0.0022	0.9664	115505	115213	268	259
hg38.chr4_KI270786v1_alt	244096	GCA_028858775.2	0.9383	0.9831	0.0006	0.8808	229032	225167	151	133
hg38.chr4_KI270786v1_alt	244096	GCA_028878055.2	0.7958	0.9538	0.0000	0.0000	194246	185281	0	0
hg38.chr4_KI270786v1_alt	244096	GCA_028885625.2	0.8174	0.9584	0.0000	0.0000	199526	191231	0	0
hg38.chr4_KI270786v1_alt	244096	GCA_028885655.2	0.8190	0.9584	0.0002	0.9000	199907	191596	40	36
hg38.chr4_KI270786v1_alt	244096	GCA_029281585.2	0.9080	0.9814	0.0006	0.9073	221627	217515	151	137
hg38.chr4_KI270786v1_alt	244096	GCA_029289425.2	0.9355	0.9828	0.0006	0.9404	228345	224408	151	142
hg38.chr4_KI270786v1_alt	244096	hg38	1.0000	1.0000	0.0019	1.0000	244096	244096	463	463
hg38.chr4_KI270786v1_alt	244096	hs1	0.9720	0.9972	0.0000	0.0000	237253	236577	0	0
hg38.chr4_KI270787v1_alt	111943	GCA_028858775.2	0.9848	0.9873	0.0293	0.9912	110245	108849	3277	3248
hg38.chr4_KI270787v1_alt	111943	GCA_028878055.2	0.8720	0.9563	0.0221	0.9628	97617	93352	2473	2381
hg38.chr4_KI270787v1_alt	111943	GCA_028885625.2	0.9777	0.9668	0.0292	0.9694	109450	105813	3273	3173
hg38.chr4_KI270787v1_alt	111943	GCA_028885655.2	0.9781	0.9668	0.0293	0.9707	109486	105854	3276	3180
hg38.chr4_KI270787v1_alt	111943	GCA_029281585.2	0.9837	0.9834	0.0292	0.9859	110114	108290	3269	3223
hg38.chr4_KI270787v1_alt	111943	GCA_029289425.2	0.9852	0.9873	0.0293	0.9915	110281	108881	3281	3253
hg38.chr4_KI270787v1_alt	111943	hg38	1.0000	1.0000	0.0373	1.0000	111943	111943	4180	4180
hg38.chr4_KI270787v1_alt	111943	hs1	0.9613	0.9995	0.0000	0.0000	107610	107558	0	0
hg38.chr4_KI270788v1_alt	158965	GCA_028858775.2	0.9682	0.9870	0.0232	0.9870	153904	151904	3689	3641
hg38.chr4_KI270788v1_alt	158965	GCA_028878055.2	0.9159	0.9654	0.0221	0.9559	145591	140557	3516	3361
hg38.chr4_KI270788v1_alt	158965	GCA_028885625.2	0.9109	0.9697	0.0220	0.9605	144803	140409	3496	3358
hg38.chr4_KI270788v1_alt	158965	GCA_028885655.2	0.9154	0.9696	0.0220	0.9597	145519	141099	3496	3355
hg38.chr4_KI270788v1_alt	158965	GCA_029281585.2	0.9642	0.9851	0.0231	0.9883	153270	150986	3678	3635
hg38.chr4_KI270788v1_alt	158965	GCA_029289425.2	0.9748	0.9872	0.0232	0.9867	154963	152986	3689	3640
hg38.chr4_KI270788v1_alt	158965	hg38	1.0000	1.0000	0.0399	1.0000	158965	158965	6338	6338
hg38.chr4_KI270788v1_alt	158965	hs1	0.9570	0.9990	0.0000	0.0000	152124	151978	0	0
hg38.chr4_KI270789v1_alt	205944	GCA_028858775.2	0.9524	0.9803	0.0040	0.8660	196142	192269	821	711
hg38.chr4_KI270789v1_alt	205944	GCA_028878055.2	0.9195	0.9491	0.0026	0.8463	189361	179725	527	446
hg38.chr4_KI270789v1_alt	205944	GCA_028885625.2	0.9288	0.9578	0.0026	0.8406	191273	183194	527	443
hg38.chr4_KI270789v1_alt	205944	GCA_028885655.2	0.9162	0.9578	0.0023	0.8373	188695	180740	467	391
hg38.chr4_KI270789v1_alt	205944	GCA_029281585.2	0.9337	0.9764	0.0008	0.8176	192299	187760	170	139
hg38.chr4_KI270789v1_alt	205944	GCA_029289425.2	0.9527	0.9806	0.0040	0.8689	196207	192407	824	716
hg38.chr4_KI270789v1_alt	205944	hg38	1.0000	1.0000	0.0048	1.0000	205944	205944	980	980
hg38.chr4_KI270789v1_alt	205944	hs1	0.9950	0.9976	0.0044	0.9901	204911	204415	905	896
hg38.chr4_KI270790v1_alt	220246	GCA_028858775.2	0.9750	0.9852	0.0359	0.9751	214742	211562	7910	7713
hg38.chr4_KI270790v1_alt	220246	GCA_028878055.2	0.9507	0.9601	0.0350	0.9597	209398	201052	7713	7402
hg38.chr4_KI270790v1_alt	220246	GCA_028885625.2	0.9748	0.9669	0.0350	0.9661	214697	207583	7706	7445
hg38.chr4_KI270790v1_alt	220246	GCA_028885655.2	0.9748	0.9668	0.0350	0.9660	214697	207571	7705	7443
hg38.chr4_KI270790v1_alt	220246	GCA_029281585.2	0.9737	0.9822	0.0315	0.9707	214446	210620	6936	6733
hg38.chr4_KI270790v1_alt	220246	GCA_029289425.2	0.9753	0.9853	0.0359	0.9746	214815	211651	7910	7709
hg38.chr4_KI270790v1_alt	220246	hg38	1.0000	1.0000	0.0422	1.0000	220246	220246	9298	9298
hg38.chr4_KI270790v1_alt	220246	hs1	0.9543	0.9983	0.0000	0.0000	210181	209815	0	0
hg38.chr4_KI270896v1_alt	378547	GCA_028858775.2	0.8734	0.9841	0.0004	0.9254	330605	325361	134	124
hg38.chr4_KI270896v1_alt	378547	GCA_028878055.2	0.6787	0.9535	0.0004	0.8433	256915	244968	134	113
hg38.chr4_KI270896v1_alt	378547	GCA_028885625.2	0.7443	0.9618	0.0004	0.8806	281746	270995	134	118
hg38.chr4_KI270896v1_alt	378547	GCA_028885655.2	0.7449	0.9618	0.0004	0.9030	281982	271224	134	121
hg38.chr4_KI270896v1_alt	378547	GCA_029281585.2	0.8154	0.9808	0.0004	0.9104	308657	302738	134	122
hg38.chr4_KI270896v1_alt	378547	GCA_029289425.2	0.8641	0.9842	0.0000	1.0000	327112	321948	1	1
hg38.chr4_KI270896v1_alt	378547	hg38	1.0000	1.0000	0.0004	1.0000	378547	378547	134	134
hg38.chr4_KI270896v1_alt	378547	hs1	0.9835	0.9979	0.0004	0.9925	372303	371526	134	133
hg38.chr4_KI270925v1_alt	555799	GCA_028858775.2	0.9364	0.9828	0.0000	0.0000	520434	511463	0	0
hg38.chr4_KI270925v1_alt	555799	GCA_028878055.2	0.7993	0.9505	0.0000	0.9000	444232	422236	10	9
hg38.chr4_KI270925v1_alt	555799	GCA_028885625.2	0.8296	0.9577	0.0005	0.9536	461107	441597	302	288
hg38.chr4_KI270925v1_alt	555799	GCA_028885655.2	0.8439	0.9575	0.0005	0.9437	469051	449104	302	285
hg38.chr4_KI270925v1_alt	555799	GCA_029281585.2	0.9190	0.9813	0.0000	0.0000	510752	501183	0	0
hg38.chr4_KI270925v1_alt	555799	GCA_029289425.2	0.9360	0.9826	0.0000	0.0000	520243	511202	0	0
hg38.chr4_KI270925v1_alt	555799	hg38	1.0000	1.0000	0.0167	1.0000	555799	555799	9275	9275
hg38.chr4_KI270925v1_alt	555799	hs1	0.9740	0.9980	0.0012	0.9625	541325	540220	666	641
hg38.chr5	181538259	GCA_028858775.2	0.9588	0.9867	0.9168	0.9867	174059490	171744139	166434099	164218464
hg38.chr5	181538259	GCA_028878055.2	0.8873	0.9609	0.8449	0.9613	161087156	154796173	153382142	147449734
hg38.chr5	181538259	GCA_028885625.2	0.9295	0.9668	0.8883	0.9671	168742540	163148005	161264951	155951728
hg38.chr5	181538259	GCA_028885655.2	0.9311	0.9669	0.8885	0.9671	169032246	163433106	161303658	155992185
hg38.chr5	181538259	GCA_029281585.2	0.9532	0.9832	0.9093	0.9832	173039723	170134247	165063777	162288953
hg38.chr5	181538259	GCA_029289425.2	0.9583	0.9867	0.9147	0.9867	173976865	171663558	166046796	163836080
hg38.chr5	181538259	hg38	0.9832	1.0000	0.9435	1.0000	178487454	178487454	171288587	171288587
hg38.chr5	181538259	hs1	0.9786	0.9989	0.9377	0.9990	177662050	177458943	170232425	170065900
hg38.chr5_GL000208v1_random	92689	GCA_028858775.2	0.1437	0.8140	0.0056	0.7784	13320	10843	519	404
hg38.chr5_GL000208v1_random	92689	GCA_028878055.2	0.0063	0.8638	0.0000	0.0000	580	501	0	0
hg38.chr5_GL000208v1_random	92689	GCA_028885625.2	0.0077	0.8401	0.0000	0.0000	713	599	0	0
hg38.chr5_GL000208v1_random	92689	GCA_028885655.2	0.0077	0.8373	0.0000	0.0000	713	597	0	0
hg38.chr5_GL000208v1_random	92689	GCA_029281585.2	0.1427	0.8525	0.0056	0.7568	13224	11274	518	392
hg38.chr5_GL000208v1_random	92689	GCA_029289425.2	0.1437	0.8290	0.0056	0.7799	13318	11041	518	404
hg38.chr5_GL000208v1_random	92689	hg38	1.0000	1.0000	0.7278	1.0000	92689	92689	67459	67459
hg38.chr5_GL000208v1_random	92689	hs1	0.9673	0.9782	0.7097	0.9708	89654	87697	65777	63856
hg38.chr5_GL339449v2_alt	1612928	GCA_028858775.2	0.8440	0.9894	0.0012	0.9882	1361381	1346968	1949	1926
hg38.chr5_GL339449v2_alt	1612928	GCA_028878055.2	0.7234	0.9586	0.0011	0.9490	1166837	1118558	1766	1676
hg38.chr5_GL339449v2_alt	1612928	GCA_028885625.2	0.7717	0.9657	0.0003	0.9276	1244697	1202018	442	410
hg38.chr5_GL339449v2_alt	1612928	GCA_028885655.2	0.7716	0.9658	0.0003	0.9278	1244558	1201954	443	411
hg38.chr5_GL339449v2_alt	1612928	GCA_029281585.2	0.8241	0.9868	0.0012	0.9815	1329222	1311718	1944	1908
hg38.chr5_GL339449v2_alt	1612928	GCA_029289425.2	0.8456	0.9894	0.0012	0.9861	1363901	1349459	1949	1922
hg38.chr5_GL339449v2_alt	1612928	hg38	0.9379	1.0000	0.0012	1.0000	1512697	1512697	1961	1961
hg38.chr5_GL339449v2_alt	1612928	hs1	0.9168	0.9984	0.0000	1.0000	1478717	1476390	47	47
hg38.chr5_GL383530v1_alt	101241	GCA_028858775.2	0.9964	0.9854	0.1399	0.9841	100874	99400	14160	13935
hg38.chr5_GL383530v1_alt	101241	GCA_028878055.2	0.8835	0.9642	0.1391	0.9703	89443	86240	14082	13664
hg38.chr5_GL383530v1_alt	101241	GCA_028885625.2	0.9164	0.9679	0.1394	0.9706	92778	89802	14113	13698
hg38.chr5_GL383530v1_alt	101241	GCA_028885655.2	0.9162	0.9677	0.1390	0.9711	92762	89765	14075	13668
hg38.chr5_GL383530v1_alt	101241	GCA_029281585.2	0.9955	0.9827	0.1398	0.9854	100790	99046	14156	13949
hg38.chr5_GL383530v1_alt	101241	GCA_029289425.2	0.9875	0.9854	0.1399	0.9840	99979	98521	14159	13933
hg38.chr5_GL383530v1_alt	101241	hg38	1.0000	1.0000	0.1400	1.0000	101241	101241	14178	14178
hg38.chr5_GL383530v1_alt	101241	hs1	0.9999	0.9997	0.1400	0.9997	101231	101201	14178	14174
hg38.chr5_GL383531v1_alt	173459	GCA_028858775.2	0.9938	0.9863	0.0224	0.9781	172375	170012	3888	3803
hg38.chr5_GL383531v1_alt	173459	GCA_028878055.2	0.8719	0.9578	0.0008	0.9552	151242	144864	134	128
hg38.chr5_GL383531v1_alt	173459	GCA_028885625.2	0.9347	0.9645	0.0008	0.9478	162130	156369	134	127
hg38.chr5_GL383531v1_alt	173459	GCA_028885655.2	0.9351	0.9645	0.0008	0.9403	162195	156429	134	126
hg38.chr5_GL383531v1_alt	173459	GCA_029281585.2	0.9945	0.9814	0.0223	0.9703	172497	169284	3873	3758
hg38.chr5_GL383531v1_alt	173459	GCA_029289425.2	0.9936	0.9862	0.0224	0.9769	172355	169982	3888	3798
hg38.chr5_GL383531v1_alt	173459	hg38	1.0000	1.0000	0.0224	1.0000	173459	173459	3888	3888
hg38.chr5_GL383531v1_alt	173459	hs1	0.9992	0.9983	0.0224	0.9997	173317	173027	3887	3886
hg38.chr5_GL383532v1_alt	82728	GCA_028858775.2	0.7969	0.9863	0.0379	0.9860	65930	65026	3136	3092
hg38.chr5_GL383532v1_alt	82728	GCA_028878055.2	0.6736	0.9558	0.0151	0.9496	55729	53264	1249	1186
hg38.chr5_GL383532v1_alt	82728	GCA_028885625.2	0.7242	0.9623	0.0378	0.9658	59913	57652	3127	3020
hg38.chr5_GL383532v1_alt	82728	GCA_028885655.2	0.7273	0.9629	0.0378	0.9664	60166	57933	3125	3020
hg38.chr5_GL383532v1_alt	82728	GCA_029281585.2	0.7991	0.9853	0.0379	0.9799	66112	65137	3136	3073
hg38.chr5_GL383532v1_alt	82728	GCA_029289425.2	0.7966	0.9863	0.0380	0.9844	65902	65002	3144	3095
hg38.chr5_GL383532v1_alt	82728	hg38	1.0000	1.0000	0.2338	1.0000	82728	82728	19341	19341
hg38.chr5_GL383532v1_alt	82728	hs1	0.7559	0.9992	0.0001	1.0000	62536	62484	7	7
hg38.chr5_GL949742v1_alt	226852	GCA_028858775.2	0.9384	0.9832	0.0373	0.9785	212877	209303	8470	8288
hg38.chr5_GL949742v1_alt	226852	GCA_028878055.2	0.7725	0.9551	0.0213	0.9580	175238	167374	4838	4635
hg38.chr5_GL949742v1_alt	226852	GCA_028885625.2	0.9226	0.9616	0.0373	0.9628	209288	201241	8462	8147
hg38.chr5_GL949742v1_alt	226852	GCA_028885655.2	0.9352	0.9618	0.0373	0.9635	212160	204064	8464	8155
hg38.chr5_GL949742v1_alt	226852	GCA_029281585.2	0.9581	0.9849	0.0374	0.9817	217353	214071	8477	8322
hg38.chr5_GL949742v1_alt	226852	GCA_029289425.2	0.9677	0.9831	0.0373	0.9766	219521	215810	8472	8274
hg38.chr5_GL949742v1_alt	226852	hg38	1.0000	1.0000	0.0374	1.0000	226852	226852	8493	8493
hg38.chr5_GL949742v1_alt	226852	hs1	0.9994	0.9978	0.0374	0.9959	226716	226206	8493	8458
hg38.chr5_KI270791v1_alt	195710	GCA_028858775.2	0.9488	0.9769	0.0000	0.5000	185698	181406	4	2
hg38.chr5_KI270791v1_alt	195710	GCA_028878055.2	0.9026	0.9464	0.0003	0.8519	176649	167177	54	46
hg38.chr5_KI270791v1_alt	195710	GCA_028885625.2	0.9094	0.9510	0.0000	0.5000	177976	169256	2	1
hg38.chr5_KI270791v1_alt	195710	GCA_028885655.2	0.9097	0.9509	0.0000	0.5000	178047	169297	2	1
hg38.chr5_KI270791v1_alt	195710	GCA_029281585.2	0.9484	0.9743	0.0003	0.8333	185602	180826	54	45
hg38.chr5_KI270791v1_alt	195710	GCA_029289425.2	0.9478	0.9779	0.0000	0.5000	185492	181401	4	2
hg38.chr5_KI270791v1_alt	195710	hg38	1.0000	1.0000	0.0027	1.0000	195710	195710	526	526
hg38.chr5_KI270791v1_alt	195710	hs1	0.9819	0.9969	0.0027	0.9847	192175	191579	524	516
hg38.chr5_KI270792v1_alt	179043	GCA_028858775.2	0.9308	0.9769	0.0002	0.9643	166657	162802	28	27
hg38.chr5_KI270792v1_alt	179043	GCA_028878055.2	0.8658	0.9408	0.0002	0.9310	155012	145843	29	27
hg38.chr5_KI270792v1_alt	179043	GCA_028885625.2	0.8972	0.9483	0.0002	1.0000	160645	152343	29	29
hg38.chr5_KI270792v1_alt	179043	GCA_028885655.2	0.8930	0.9480	0.0002	0.9655	159882	151573	29	28
hg38.chr5_KI270792v1_alt	179043	GCA_029281585.2	0.9058	0.9717	0.0003	1.0000	162177	157587	52	52
hg38.chr5_KI270792v1_alt	179043	GCA_029289425.2	0.9323	0.9769	0.0005	0.9545	166914	163057	88	84
hg38.chr5_KI270792v1_alt	179043	hg38	0.9982	1.0000	0.0021	1.0000	178727	178727	374	374
hg38.chr5_KI270792v1_alt	179043	hs1	0.9697	0.9982	0.0006	1.0000	173617	173300	102	102
hg38.chr5_KI270793v1_alt	126136	GCA_028858775.2	0.9175	0.9784	0.0002	0.9310	115730	113227	29	27
hg38.chr5_KI270793v1_alt	126136	GCA_028878055.2	0.8726	0.9402	0.0000	0.0000	110072	103488	0	0
hg38.chr5_KI270793v1_alt	126136	GCA_028885625.2	0.8956	0.9481	0.0002	0.9655	112973	107113	29	28
hg38.chr5_KI270793v1_alt	126136	GCA_028885655.2	0.8973	0.9481	0.0002	0.9655	113176	107301	29	28
hg38.chr5_KI270793v1_alt	126136	GCA_029281585.2	0.8877	0.9743	0.0002	0.9655	111971	109095	29	28
hg38.chr5_KI270793v1_alt	126136	GCA_029289425.2	0.9199	0.9786	0.0002	0.9655	116031	113553	29	28
hg38.chr5_KI270793v1_alt	126136	hg38	1.0000	1.0000	0.0002	1.0000	126136	126136	29	29
hg38.chr5_KI270793v1_alt	126136	hs1	0.9661	0.9990	0.0002	0.9655	121859	121736	29	28
hg38.chr5_KI270794v1_alt	164558	GCA_028858775.2	0.9575	0.9876	0.0100	0.9829	157570	155621	1642	1614
hg38.chr5_KI270794v1_alt	164558	GCA_028878055.2	0.9691	0.9608	0.0099	0.9615	159468	153220	1635	1572
hg38.chr5_KI270794v1_alt	164558	GCA_028885625.2	0.9649	0.9636	0.0099	0.9618	158787	153010	1623	1561
hg38.chr5_KI270794v1_alt	164558	GCA_028885655.2	0.9584	0.9637	0.0099	0.9649	157706	151978	1624	1567
hg38.chr5_KI270794v1_alt	164558	GCA_029281585.2	0.9796	0.9834	0.0100	0.9823	161202	158528	1642	1613
hg38.chr5_KI270794v1_alt	164558	GCA_029289425.2	0.9311	0.9873	0.0100	0.9848	153215	151264	1642	1617
hg38.chr5_KI270794v1_alt	164558	hg38	1.0000	1.0000	0.0100	1.0000	164558	164558	1646	1646
hg38.chr5_KI270794v1_alt	164558	hs1	0.9996	0.9985	0.0100	1.0000	164486	164242	1646	1646
hg38.chr5_KI270795v1_alt	131892	GCA_028858775.2	0.9021	0.9782	0.0000	0.0000	118975	116387	0	0
hg38.chr5_KI270795v1_alt	131892	GCA_028878055.2	0.8724	0.9581	0.0000	0.0000	115069	110251	0	0
hg38.chr5_KI270795v1_alt	131892	GCA_028885625.2	0.9355	0.9626	0.0000	0.0000	123387	118773	0	0
hg38.chr5_KI270795v1_alt	131892	GCA_028885655.2	0.9383	0.9631	0.0000	0.0000	123757	119193	0	0
hg38.chr5_KI270795v1_alt	131892	GCA_029281585.2	0.9385	0.9811	0.0001	1.0000	123775	121432	12	12
hg38.chr5_KI270795v1_alt	131892	GCA_029289425.2	0.9261	0.9793	0.0000	0.0000	122148	119616	0	0
hg38.chr5_KI270795v1_alt	131892	hg38	1.0000	1.0000	0.0044	1.0000	131892	131892	583	583
hg38.chr5_KI270795v1_alt	131892	hs1	0.9816	0.9977	0.0044	1.0000	129461	129157	583	583
hg38.chr5_KI270796v1_alt	172708	GCA_028858775.2	0.9349	0.9859	0.0149	0.9786	161466	159195	2572	2517
hg38.chr5_KI270796v1_alt	172708	GCA_028878055.2	0.8955	0.9616	0.0059	0.9451	154656	148721	1020	964
hg38.chr5_KI270796v1_alt	172708	GCA_028885625.2	0.9210	0.9673	0.0132	0.9626	159060	153862	2273	2188
hg38.chr5_KI270796v1_alt	172708	GCA_028885655.2	0.9210	0.9676	0.0132	0.9648	159062	153902	2273	2193
hg38.chr5_KI270796v1_alt	172708	GCA_029281585.2	0.9325	0.9817	0.0149	0.9767	161055	158102	2571	2511
hg38.chr5_KI270796v1_alt	172708	GCA_029289425.2	0.9346	0.9861	0.0149	0.9833	161411	159167	2571	2528
hg38.chr5_KI270796v1_alt	172708	hg38	1.0000	1.0000	0.0174	1.0000	172708	172708	3008	3008
hg38.chr5_KI270796v1_alt	172708	hs1	0.9488	0.9982	0.0000	0.0000	163869	163576	0	0
hg38.chr5_KI270897v1_alt	1144418	GCA_028858775.2	0.8580	0.9908	0.0000	0.0000	981892	972854	0	0
hg38.chr5_KI270897v1_alt	1144418	GCA_028878055.2	0.7017	0.9588	0.0000	0.0000	803000	769919	0	0
hg38.chr5_KI270897v1_alt	1144418	GCA_028885625.2	0.7598	0.9662	0.0000	0.0000	869472	840043	0	0
hg38.chr5_KI270897v1_alt	1144418	GCA_028885655.2	0.7598	0.9662	0.0000	0.0000	869536	840136	0	0
hg38.chr5_KI270897v1_alt	1144418	GCA_029281585.2	0.8306	0.9893	0.0000	0.0000	950586	940453	0	0
hg38.chr5_KI270897v1_alt	1144418	GCA_029289425.2	0.8603	0.9909	0.0000	0.0000	984598	975624	0	0
hg38.chr5_KI270897v1_alt	1144418	hg38	0.9562	1.0000	0.0050	1.0000	1094328	1094328	5736	5736
hg38.chr5_KI270897v1_alt	1144418	hs1	0.9528	0.9992	0.0048	0.9818	1090416	1089521	5548	5447
hg38.chr5_KI270898v1_alt	130957	GCA_028858775.2	0.9045	0.9801	0.0000	0.0000	118451	116090	0	0
hg38.chr5_KI270898v1_alt	130957	GCA_028878055.2	0.8794	0.9582	0.0000	0.0000	115161	110346	0	0
hg38.chr5_KI270898v1_alt	130957	GCA_028885625.2	0.9365	0.9645	0.0000	0.0000	122636	118285	0	0
hg38.chr5_KI270898v1_alt	130957	GCA_028885655.2	0.9374	0.9651	0.0000	0.0000	122758	118470	0	0
hg38.chr5_KI270898v1_alt	130957	GCA_029281585.2	0.9399	0.9829	0.0000	0.0000	123088	120982	0	0
hg38.chr5_KI270898v1_alt	130957	GCA_029289425.2	0.9290	0.9809	0.0000	0.0000	121655	119330	0	0
hg38.chr5_KI270898v1_alt	130957	hg38	1.0000	1.0000	0.0000	0.0000	130957	130957	0	0
hg38.chr5_KI270898v1_alt	130957	hs1	0.9850	0.9965	0.0000	0.0000	128991	128536	0	0
hg38.chr6	170805979	GCA_028858775.2	0.9703	0.9870	0.9007	0.9870	165726266	163571415	153838564	151838383
hg38.chr6	170805979	GCA_028878055.2	0.9015	0.9616	0.8431	0.9619	153984989	148074753	144003396	138519702
hg38.chr6	170805979	GCA_028885625.2	0.9412	0.9673	0.8836	0.9674	160757463	155501305	150928675	146014793
hg38.chr6	170805979	GCA_028885655.2	0.9415	0.9673	0.8832	0.9675	160807330	155551973	150855481	145946013
hg38.chr6	170805979	GCA_029281585.2	0.9670	0.9835	0.8964	0.9835	165174394	162454003	153112043	150582720
hg38.chr6	170805979	GCA_029289425.2	0.9706	0.9870	0.8997	0.9870	165783416	163625520	153678031	151674815
hg38.chr6	170805979	hg38	0.9930	1.0000	0.9341	1.0000	169608079	169608079	159546527	159546527
hg38.chr6	170805979	hs1	0.9891	0.9988	0.9293	0.9988	168943868	168734516	158735768	158550256
hg38.chr6_GL000250v2_alt	4672374	GCA_028858775.2	0.4119	0.9832	0.0000	1.0000	1924660	1892409	3	3
hg38.chr6_GL000250v2_alt	4672374	GCA_028878055.2	0.3217	0.9510	0.0000	1.0000	1503059	1429422	1	1
hg38.chr6_GL000250v2_alt	4672374	GCA_028885625.2	0.4053	0.9610	0.0000	1.0000	1893562	1819724	1	1
hg38.chr6_GL000250v2_alt	4672374	GCA_028885655.2	0.4056	0.9612	0.0000	1.0000	1895009	1821573	1	1
hg38.chr6_GL000250v2_alt	4672374	GCA_029281585.2	0.4124	0.9810	0.0000	1.0000	1926814	1890240	3	3
hg38.chr6_GL000250v2_alt	4672374	GCA_029289425.2	0.4123	0.9830	0.0000	1.0000	1926556	1893748	2	2
hg38.chr6_GL000250v2_alt	4672374	hg38	0.4801	1.0000	0.0000	1.0000	2243372	2243372	3	3
hg38.chr6_GL000250v2_alt	4672374	hs1	0.4383	0.9972	0.0000	1.0000	2047776	2042002	1	1
hg38.chr6_GL000251v2_alt	4795265	GCA_028858775.2	0.9366	0.9853	0.0000	1.0000	4491227	4425273	13	13
hg38.chr6_GL000251v2_alt	4795265	GCA_028878055.2	0.7715	0.9561	0.0000	1.0000	3699561	3537305	6	6
hg38.chr6_GL000251v2_alt	4795265	GCA_028885625.2	0.9068	0.9643	0.0000	0.9048	4348576	4193299	21	19
hg38.chr6_GL000251v2_alt	4795265	GCA_028885655.2	0.9092	0.9647	0.0000	0.9048	4359725	4205796	21	19
hg38.chr6_GL000251v2_alt	4795265	GCA_029281585.2	0.9350	0.9830	0.0000	1.0000	4483348	4407186	21	21
hg38.chr6_GL000251v2_alt	4795265	GCA_029289425.2	0.9372	0.9852	0.0000	1.0000	4494130	4427499	13	13
hg38.chr6_GL000251v2_alt	4795265	hg38	0.9992	1.0000	0.0000	1.0000	4791644	4791644	39	39
hg38.chr6_GL000251v2_alt	4795265	hs1	0.9847	0.9977	0.0000	1.0000	4721763	4710967	15	15
hg38.chr6_GL000252v2_alt	4604811	GCA_028858775.2	0.8504	0.9857	0.0006	0.9765	3916015	3860084	2558	2498
hg38.chr6_GL000252v2_alt	4604811	GCA_028878055.2	0.7023	0.9566	0.0007	0.9062	3234159	3093865	3305	2995
hg38.chr6_GL000252v2_alt	4604811	GCA_028885625.2	0.8321	0.9640	0.0003	0.9600	3831525	3693529	1274	1223
hg38.chr6_GL000252v2_alt	4604811	GCA_028885655.2	0.8344	0.9645	0.0005	0.9617	3842074	3705550	2532	2435
hg38.chr6_GL000252v2_alt	4604811	GCA_029281585.2	0.8503	0.9834	0.0006	0.9754	3915333	3850332	2561	2498
hg38.chr6_GL000252v2_alt	4604811	GCA_029289425.2	0.8506	0.9855	0.0006	0.9777	3916876	3860095	2561	2504
hg38.chr6_GL000252v2_alt	4604811	hg38	0.9073	1.0000	0.0017	1.0000	4177808	4177808	7776	7776
hg38.chr6_GL000252v2_alt	4604811	hs1	0.8884	0.9977	0.0017	1.0000	4090788	4081457	7775	7775
hg38.chr6_GL000253v2_alt	4677643	GCA_028858775.2	0.7184	0.9842	0.0000	0.9890	3360621	3307372	91	90
hg38.chr6_GL000253v2_alt	4677643	GCA_028878055.2	0.5604	0.9532	0.0000	0.9222	2621480	2498763	90	83
hg38.chr6_GL000253v2_alt	4677643	GCA_028885625.2	0.6938	0.9628	0.0000	0.9333	3245311	3124482	90	84
hg38.chr6_GL000253v2_alt	4677643	GCA_028885655.2	0.6958	0.9633	0.0000	0.9333	3254770	3135318	90	84
hg38.chr6_GL000253v2_alt	4677643	GCA_029281585.2	0.7192	0.9813	0.0000	0.9780	3364300	3301503	91	89
hg38.chr6_GL000253v2_alt	4677643	GCA_029289425.2	0.7149	0.9838	0.0000	0.9890	3344092	3289852	91	90
hg38.chr6_GL000253v2_alt	4677643	hg38	0.8252	1.0000	0.0001	1.0000	3859996	3859996	298	298
hg38.chr6_GL000253v2_alt	4677643	hs1	0.7516	0.9948	0.0000	1.0000	3515820	3497646	1	1
hg38.chr6_GL000254v2_alt	4827813	GCA_028858775.2	0.6327	0.9857	0.0000	1.0000	3054579	3010893	7	7
hg38.chr6_GL000254v2_alt	4827813	GCA_028878055.2	0.5120	0.9559	0.0000	0.0000	2472016	2362886	1	0
hg38.chr6_GL000254v2_alt	4827813	GCA_028885625.2	0.6166	0.9639	0.0000	0.5000	2976994	2869638	2	1
hg38.chr6_GL000254v2_alt	4827813	GCA_028885655.2	0.6187	0.9643	0.0000	0.5000	2986856	2880331	2	1
hg38.chr6_GL000254v2_alt	4827813	GCA_029281585.2	0.6326	0.9825	0.0000	0.5000	3054209	3000814	2	1
hg38.chr6_GL000254v2_alt	4827813	GCA_029289425.2	0.6293	0.9853	0.0000	1.0000	3037916	2993307	7	7
hg38.chr6_GL000254v2_alt	4827813	hg38	0.7476	1.0000	0.0000	1.0000	3609498	3609498	7	7
hg38.chr6_GL000254v2_alt	4827813	hs1	0.6609	0.9972	0.0000	1.0000	3190940	3182070	7	7
hg38.chr6_GL000255v2_alt	4606388	GCA_028858775.2	0.8745	0.9852	0.0000	1.0000	4028136	3968666	59	59
hg38.chr6_GL000255v2_alt	4606388	GCA_028878055.2	0.7275	0.9559	0.0000	0.7805	3351116	3203194	41	32
hg38.chr6_GL000255v2_alt	4606388	GCA_028885625.2	0.8480	0.9641	0.0000	0.8070	3906322	3766029	57	46
hg38.chr6_GL000255v2_alt	4606388	GCA_028885655.2	0.8504	0.9645	0.0000	0.7719	3917370	3778354	57	44
hg38.chr6_GL000255v2_alt	4606388	GCA_029281585.2	0.8741	0.9831	0.0000	0.8305	4026509	3958311	59	49
hg38.chr6_GL000255v2_alt	4606388	GCA_029289425.2	0.8751	0.9851	0.0000	1.0000	4031274	3971243	59	59
hg38.chr6_GL000255v2_alt	4606388	hg38	0.9307	1.0000	0.0000	1.0000	4286955	4286955	132	132
hg38.chr6_GL000255v2_alt	4606388	hs1	0.9162	0.9972	0.0000	1.0000	4220224	4208220	42	42
hg38.chr6_GL000256v2_alt	4929269	GCA_028858775.2	0.7127	0.9843	0.0004	0.9912	3512956	3457877	2037	2019
hg38.chr6_GL000256v2_alt	4929269	GCA_028878055.2	0.5671	0.9548	0.0000	0.9907	2795294	2668979	107	106
hg38.chr6_GL000256v2_alt	4929269	GCA_028885625.2	0.6895	0.9638	0.0004	0.9690	3398778	3275723	2034	1971
hg38.chr6_GL000256v2_alt	4929269	GCA_028885655.2	0.6918	0.9643	0.0004	0.9685	3409882	3288166	2034	1970
hg38.chr6_GL000256v2_alt	4929269	GCA_029281585.2	0.7156	0.9815	0.0004	0.9886	3527285	3461950	2024	2001
hg38.chr6_GL000256v2_alt	4929269	GCA_029289425.2	0.7095	0.9840	0.0004	0.9902	3497341	3441263	2042	2022
hg38.chr6_GL000256v2_alt	4929269	hg38	0.8407	1.0000	0.0011	1.0000	4144252	4144252	5428	5428
hg38.chr6_GL000256v2_alt	4929269	hs1	0.7517	0.9947	0.0000	1.0000	3705222	3685606	16	16
hg38.chr6_GL383533v1_alt	124736	GCA_028858775.2	0.9985	0.9866	0.2182	0.9889	124545	122881	27218	26916
hg38.chr6_GL383533v1_alt	124736	GCA_028878055.2	0.8942	0.9626	0.1574	0.9640	111534	107364	19633	18927
hg38.chr6_GL383533v1_alt	124736	GCA_028885625.2	0.9670	0.9687	0.2176	0.9683	120625	116853	27147	26287
hg38.chr6_GL383533v1_alt	124736	GCA_028885655.2	0.9675	0.9689	0.2179	0.9684	120677	116923	27176	26318
hg38.chr6_GL383533v1_alt	124736	GCA_029281585.2	0.9980	0.9842	0.2178	0.9844	124485	122515	27173	26750
hg38.chr6_GL383533v1_alt	124736	GCA_029289425.2	0.9986	0.9863	0.2182	0.9885	124563	122856	27222	26908
hg38.chr6_GL383533v1_alt	124736	hg38	1.0000	1.0000	0.2186	1.0000	124736	124736	27271	27271
hg38.chr6_GL383533v1_alt	124736	hs1	0.9998	0.9989	0.2186	0.9999	124706	124574	27271	27269
hg38.chr6_KB021644v2_alt	185823	GCA_028858775.2	0.7999	0.9804	0.0007	0.9231	148644	145738	130	120
hg38.chr6_KB021644v2_alt	185823	GCA_028878055.2	0.7345	0.9465	0.0003	0.9655	136490	129183	58	56
hg38.chr6_KB021644v2_alt	185823	GCA_028885625.2	0.7909	0.9542	0.0000	0.0000	146971	140247	0	0
hg38.chr6_KB021644v2_alt	185823	GCA_028885655.2	0.7888	0.9546	0.0000	0.0000	146574	139920	0	0
hg38.chr6_KB021644v2_alt	185823	GCA_029281585.2	0.8056	0.9773	0.0007	0.9769	149692	146290	130	127
hg38.chr6_KB021644v2_alt	185823	GCA_029289425.2	0.8028	0.9798	0.0007	0.9077	149186	146167	130	118
hg38.chr6_KB021644v2_alt	185823	hg38	0.9462	1.0000	0.0007	1.0000	175823	175823	131	131
hg38.chr6_KB021644v2_alt	185823	hs1	0.8315	0.9950	0.0007	0.9845	154506	153740	129	127
hg38.chr6_KI270758v1_alt	76752	GCA_028858775.2	0.8790	0.9811	0.0816	0.9859	67462	66185	6263	6175
hg38.chr6_KI270758v1_alt	76752	GCA_028878055.2	0.9039	0.9597	0.0647	0.9577	69373	66580	4968	4758
hg38.chr6_KI270758v1_alt	76752	GCA_028885625.2	0.9209	0.9612	0.0825	0.9602	70679	67939	6331	6079
hg38.chr6_KI270758v1_alt	76752	GCA_028885655.2	0.9206	0.9616	0.0824	0.9602	70659	67945	6325	6073
hg38.chr6_KI270758v1_alt	76752	GCA_029281585.2	0.9333	0.9779	0.0837	0.9902	71632	70046	6427	6364
hg38.chr6_KI270758v1_alt	76752	GCA_029289425.2	0.8786	0.9796	0.0816	0.9856	67432	66057	6261	6171
hg38.chr6_KI270758v1_alt	76752	hg38	1.0000	1.0000	0.0934	1.0000	76752	76752	7167	7167
hg38.chr6_KI270758v1_alt	76752	hs1	0.8805	0.9932	0.0000	0.0000	67580	67121	0	0
hg38.chr6_KI270797v1_alt	197536	GCA_028858775.2	0.9191	0.9813	0.0000	0.0000	181546	178150	0	0
hg38.chr6_KI270797v1_alt	197536	GCA_028878055.2	0.8867	0.9511	0.0013	0.9414	175149	166576	256	241
hg38.chr6_KI270797v1_alt	197536	GCA_028885625.2	0.9164	0.9606	0.0008	0.9437	181019	173886	160	151
hg38.chr6_KI270797v1_alt	197536	GCA_028885655.2	0.9170	0.9603	0.0008	0.9427	181147	173953	157	148
hg38.chr6_KI270797v1_alt	197536	GCA_029281585.2	0.9422	0.9774	0.0014	0.9610	186122	181922	282	271
hg38.chr6_KI270797v1_alt	197536	GCA_029289425.2	0.9165	0.9806	0.0000	0.0000	181039	177520	0	0
hg38.chr6_KI270797v1_alt	197536	hg38	1.0000	1.0000	0.0017	1.0000	197536	197536	345	345
hg38.chr6_KI270797v1_alt	197536	hs1	0.9794	0.9978	0.0017	0.9942	193467	193046	342	340
hg38.chr6_KI270798v1_alt	271782	GCA_028858775.2	0.9207	0.9845	0.0000	0.0000	250235	246350	0	0
hg38.chr6_KI270798v1_alt	271782	GCA_028878055.2	0.8286	0.9568	0.0000	0.0000	225193	215466	0	0
hg38.chr6_KI270798v1_alt	271782	GCA_028885625.2	0.8998	0.9650	0.0000	0.0000	244552	235986	0	0
hg38.chr6_KI270798v1_alt	271782	GCA_028885655.2	0.8964	0.9650	0.0000	0.0000	243615	235088	0	0
hg38.chr6_KI270798v1_alt	271782	GCA_029281585.2	0.9041	0.9814	0.0000	0.0000	245706	241140	0	0
hg38.chr6_KI270798v1_alt	271782	GCA_029289425.2	0.9189	0.9844	0.0000	0.0000	249738	245851	0	0
hg38.chr6_KI270798v1_alt	271782	hg38	1.0000	1.0000	0.0000	0.0000	271782	271782	0	0
hg38.chr6_KI270798v1_alt	271782	hs1	0.8885	0.9985	0.0000	0.0000	241488	241120	0	0
hg38.chr6_KI270799v1_alt	152148	GCA_028858775.2	0.8950	0.9826	0.0508	0.9754	136169	133800	7727	7537
hg38.chr6_KI270799v1_alt	152148	GCA_028878055.2	0.8035	0.9596	0.0199	0.9616	122257	117321	3022	2906
hg38.chr6_KI270799v1_alt	152148	GCA_028885625.2	0.9034	0.9638	0.0476	0.9575	137449	132469	7248	6940
hg38.chr6_KI270799v1_alt	152148	GCA_028885655.2	0.9037	0.9643	0.0476	0.9579	137492	132577	7245	6940
hg38.chr6_KI270799v1_alt	152148	GCA_029281585.2	0.9205	0.9793	0.0477	0.9764	140049	137144	7257	7086
hg38.chr6_KI270799v1_alt	152148	GCA_029289425.2	0.8950	0.9826	0.0508	0.9758	136175	133806	7725	7538
hg38.chr6_KI270799v1_alt	152148	hg38	1.0000	1.0000	0.0509	1.0000	152148	152148	7746	7746
hg38.chr6_KI270799v1_alt	152148	hs1	0.9998	0.9987	0.0509	1.0000	152120	151926	7746	7746
hg38.chr6_KI270800v1_alt	175808	GCA_028858775.2	0.5183	0.9917	0.0000	0.0000	91119	90359	0	0
hg38.chr6_KI270800v1_alt	175808	GCA_028878055.2	0.5239	0.9609	0.0334	0.9581	92100	88502	5874	5628
hg38.chr6_KI270800v1_alt	175808	GCA_028885625.2	0.5504	0.9670	0.0334	0.9663	96767	93570	5876	5678
hg38.chr6_KI270800v1_alt	175808	GCA_028885655.2	0.5508	0.9670	0.0334	0.9663	96834	93639	5879	5681
hg38.chr6_KI270800v1_alt	175808	GCA_029281585.2	0.5441	0.9877	0.0000	0.0000	95653	94472	0	0
hg38.chr6_KI270800v1_alt	175808	GCA_029289425.2	0.5183	0.9926	0.0000	0.0000	91121	90451	0	0
hg38.chr6_KI270800v1_alt	175808	hg38	0.5638	1.0000	0.0352	1.0000	99129	99129	6193	6193
hg38.chr6_KI270800v1_alt	175808	hs1	0.5588	0.9960	0.0352	0.9987	98244	97852	6189	6181
hg38.chr6_KI270801v1_alt	870480	GCA_028858775.2	0.9937	0.9880	0.0035	0.9924	865018	854644	3019	2996
hg38.chr6_KI270801v1_alt	870480	GCA_028878055.2	0.9385	0.9640	0.0035	0.9731	816937	787528	3016	2935
hg38.chr6_KI270801v1_alt	870480	GCA_028885625.2	0.9808	0.9689	0.0034	0.9760	853805	827232	3000	2928
hg38.chr6_KI270801v1_alt	870480	GCA_028885655.2	0.9836	0.9688	0.0034	0.9753	856186	829503	3000	2926
hg38.chr6_KI270801v1_alt	870480	GCA_029281585.2	0.9950	0.9845	0.0035	0.9867	866163	852722	3015	2975
hg38.chr6_KI270801v1_alt	870480	GCA_029289425.2	0.9908	0.9881	0.0035	0.9914	862489	852232	3019	2993
hg38.chr6_KI270801v1_alt	870480	hg38	1.0000	1.0000	0.0035	1.0000	870480	870480	3019	3019
hg38.chr6_KI270801v1_alt	870480	hs1	0.9997	0.9995	0.0035	0.9997	870216	869751	3019	3018
hg38.chr6_KI270802v1_alt	75005	GCA_028858775.2	0.9912	0.9817	0.1057	0.9837	74346	72984	7925	7796
hg38.chr6_KI270802v1_alt	75005	GCA_028878055.2	0.8018	0.9487	0.0239	0.9443	60140	57056	1796	1696
hg38.chr6_KI270802v1_alt	75005	GCA_028885625.2	0.9543	0.9573	0.1056	0.9602	71580	68521	7919	7604
hg38.chr6_KI270802v1_alt	75005	GCA_028885655.2	0.9550	0.9572	0.1056	0.9626	71633	68568	7919	7623
hg38.chr6_KI270802v1_alt	75005	GCA_029281585.2	0.9941	0.9793	0.1053	0.9752	74562	73018	7899	7703
hg38.chr6_KI270802v1_alt	75005	GCA_029289425.2	0.9933	0.9819	0.1058	0.9827	74502	73153	7934	7797
hg38.chr6_KI270802v1_alt	75005	hg38	1.0000	1.0000	0.1059	1.0000	75005	75005	7946	7946
hg38.chr6_KI270802v1_alt	75005	hs1	0.8852	0.9989	0.0041	0.9935	66393	66322	308	306
hg38.chr7	159345973	GCA_028858775.2	0.9539	0.9866	0.8618	0.9867	152004947	149968199	137319157	135487040
hg38.chr7	159345973	GCA_028878055.2	0.8934	0.9599	0.8101	0.9609	142355150	136651847	129086344	124038365
hg38.chr7	159345973	GCA_028885625.2	0.9205	0.9661	0.8302	0.9664	146680528	141715059	132294353	127849706
hg38.chr7	159345973	GCA_028885655.2	0.9207	0.9662	0.8307	0.9664	146705769	141740487	132369923	127923607
hg38.chr7	159345973	GCA_029281585.2	0.9478	0.9831	0.8553	0.9831	151027976	148470225	136294691	133988913
hg38.chr7	159345973	GCA_029289425.2	0.9532	0.9867	0.8595	0.9867	151893904	149867859	136958343	135134444
hg38.chr7	159345973	hg38	0.9816	1.0000	0.8943	1.0000	156420095	156420095	142505629	142505629
hg38.chr7	159345973	hs1	0.9771	0.9988	0.8898	0.9988	155702895	155515794	141780226	141615507
hg38.chr7_GL383534v2_alt	119183	GCA_028858775.2	0.9760	0.9900	0.0323	0.9907	116317	115150	3854	3818
hg38.chr7_GL383534v2_alt	119183	GCA_028878055.2	0.9684	0.9649	0.0323	0.9639	115422	111366	3849	3710
hg38.chr7_GL383534v2_alt	119183	GCA_028885625.2	0.9711	0.9691	0.0323	0.9664	115737	112156	3845	3716
hg38.chr7_GL383534v2_alt	119183	GCA_028885655.2	0.9711	0.9692	0.0322	0.9667	115735	112174	3843	3715
hg38.chr7_GL383534v2_alt	119183	GCA_029281585.2	0.9757	0.9853	0.0323	0.9873	116292	114579	3855	3806
hg38.chr7_GL383534v2_alt	119183	GCA_029289425.2	0.9757	0.9899	0.0324	0.9904	116290	115120	3859	3822
hg38.chr7_GL383534v2_alt	119183	hg38	1.0000	1.0000	0.0324	1.0000	119183	119183	3864	3864
hg38.chr7_GL383534v2_alt	119183	hs1	0.9449	0.9990	0.0000	0.0000	112613	112504	0	0
hg38.chr7_KI270803v1_alt	1111570	GCA_028858775.2	0.9663	0.9842	0.0050	0.9792	1074116	1057181	5535	5420
hg38.chr7_KI270803v1_alt	1111570	GCA_028878055.2	0.9034	0.9524	0.0002	0.9363	1004157	956403	251	235
hg38.chr7_KI270803v1_alt	1111570	GCA_028885625.2	0.9499	0.9604	0.0003	0.8365	1055912	1014053	312	261
hg38.chr7_KI270803v1_alt	1111570	GCA_028885655.2	0.9502	0.9599	0.0005	0.8854	1056176	1013830	611	541
hg38.chr7_KI270803v1_alt	1111570	GCA_029281585.2	0.9597	0.9773	0.0004	0.9557	1066803	1042594	474	453
hg38.chr7_KI270803v1_alt	1111570	GCA_029289425.2	0.9729	0.9840	0.0010	0.9627	1081488	1064187	1073	1033
hg38.chr7_KI270803v1_alt	1111570	hg38	1.0000	1.0000	0.0115	1.0000	1111570	1111570	12838	12838
hg38.chr7_KI270803v1_alt	1111570	hs1	0.9892	0.9973	0.0107	0.9988	1099606	1096679	11875	11861
hg38.chr7_KI270804v1_alt	157952	GCA_028858775.2	0.8568	0.9846	0.0000	1.0000	135339	133261	2	2
hg38.chr7_KI270804v1_alt	157952	GCA_028878055.2	0.8409	0.9396	0.0000	0.0000	132820	124793	0	0
hg38.chr7_KI270804v1_alt	157952	GCA_028885625.2	0.9108	0.9474	0.0000	0.0000	143857	136283	0	0
hg38.chr7_KI270804v1_alt	157952	GCA_028885655.2	0.9108	0.9476	0.0000	0.0000	143863	136321	0	0
hg38.chr7_KI270804v1_alt	157952	GCA_029281585.2	0.9393	0.9772	0.0000	0.0000	148372	144982	0	0
hg38.chr7_KI270804v1_alt	157952	GCA_029289425.2	0.8555	0.9848	0.0000	0.0000	135124	133070	0	0
hg38.chr7_KI270804v1_alt	157952	hg38	1.0000	1.0000	0.0000	1.0000	157952	157952	2	2
hg38.chr7_KI270804v1_alt	157952	hs1	0.9734	0.9977	0.0000	0.0000	153750	153403	0	0
hg38.chr7_KI270805v1_alt	209988	GCA_028858775.2	0.8797	0.9772	0.0000	0.0000	184728	180525	0	0
hg38.chr7_KI270805v1_alt	209988	GCA_028878055.2	0.8047	0.9411	0.0000	0.0000	168983	159023	0	0
hg38.chr7_KI270805v1_alt	209988	GCA_028885625.2	0.8381	0.9489	0.0000	0.0000	175993	166995	0	0
hg38.chr7_KI270805v1_alt	209988	GCA_028885655.2	0.8391	0.9493	0.0000	0.0000	176206	167270	0	0
hg38.chr7_KI270805v1_alt	209988	GCA_029281585.2	0.8671	0.9726	0.0000	0.0000	182077	177091	0	0
hg38.chr7_KI270805v1_alt	209988	GCA_029289425.2	0.8675	0.9774	0.0000	0.0000	182163	178039	0	0
hg38.chr7_KI270805v1_alt	209988	hg38	1.0000	1.0000	0.0000	0.0000	209988	209988	0	0
hg38.chr7_KI270805v1_alt	209988	hs1	0.9453	0.9942	0.0000	0.0000	198508	197357	0	0
hg38.chr7_KI270806v1_alt	158166	GCA_028858775.2	0.9748	0.9923	0.0000	0.0000	154176	152984	0	0
hg38.chr7_KI270806v1_alt	158166	GCA_028878055.2	0.9412	0.9667	0.0000	0.0000	148867	143908	0	0
hg38.chr7_KI270806v1_alt	158166	GCA_028885625.2	0.9455	0.9749	0.0000	0.0000	149550	145797	0	0
hg38.chr7_KI270806v1_alt	158166	GCA_028885655.2	0.9455	0.9750	0.0000	0.0000	149551	145805	0	0
hg38.chr7_KI270806v1_alt	158166	GCA_029281585.2	0.9544	0.9903	0.0000	0.0000	150959	149497	0	0
hg38.chr7_KI270806v1_alt	158166	GCA_029289425.2	0.9747	0.9922	0.0000	0.0000	154171	152976	0	0
hg38.chr7_KI270806v1_alt	158166	hg38	1.0000	1.0000	0.0000	0.0000	158166	158166	0	0
hg38.chr7_KI270806v1_alt	158166	hs1	0.9788	0.9985	0.0000	0.0000	154807	154580	0	0
hg38.chr7_KI270807v1_alt	126434	GCA_028858775.2	0.9298	0.9724	0.0043	0.9253	117560	114321	549	508
hg38.chr7_KI270807v1_alt	126434	GCA_028878055.2	0.8104	0.9367	0.0002	0.7407	102461	95979	27	20
hg38.chr7_KI270807v1_alt	126434	GCA_028885625.2	0.8452	0.9446	0.0007	0.8851	106861	100943	87	77
hg38.chr7_KI270807v1_alt	126434	GCA_028885655.2	0.8447	0.9434	0.0013	0.8970	106797	100748	165	148
hg38.chr7_KI270807v1_alt	126434	GCA_029281585.2	0.8970	0.9681	0.0080	0.9083	113407	109793	1014	921
hg38.chr7_KI270807v1_alt	126434	GCA_029289425.2	0.9255	0.9720	0.0053	0.8802	117010	113737	668	588
hg38.chr7_KI270807v1_alt	126434	hg38	1.0000	1.0000	0.0143	1.0000	126434	126434	1803	1803
hg38.chr7_KI270807v1_alt	126434	hs1	0.9538	0.9960	0.0120	0.9540	120587	120099	1522	1452
hg38.chr7_KI270808v1_alt	271455	GCA_028858775.2	0.3044	0.9824	0.0125	0.9888	82620	81162	3405	3367
hg38.chr7_KI270808v1_alt	271455	GCA_028878055.2	0.2739	0.9532	0.0125	0.9616	74363	70881	3383	3253
hg38.chr7_KI270808v1_alt	271455	GCA_028885625.2	0.2808	0.9578	0.0125	0.9628	76220	73003	3390	3264
hg38.chr7_KI270808v1_alt	271455	GCA_028885655.2	0.2814	0.9579	0.0125	0.9638	76397	73177	3394	3271
hg38.chr7_KI270808v1_alt	271455	GCA_029281585.2	0.2822	0.9790	0.0126	0.9845	76615	75008	3418	3365
hg38.chr7_KI270808v1_alt	271455	GCA_029289425.2	0.3045	0.9830	0.0125	0.9879	82665	81262	3383	3342
hg38.chr7_KI270808v1_alt	271455	hg38	0.3223	1.0000	0.0126	1.0000	87494	87494	3421	3421
hg38.chr7_KI270808v1_alt	271455	hs1	0.3219	0.9982	0.0126	0.9994	87382	87223	3420	3418
hg38.chr7_KI270809v1_alt	209586	GCA_028858775.2	0.9882	0.9939	0.0000	0.0000	207106	205841	0	0
hg38.chr7_KI270809v1_alt	209586	GCA_028878055.2	0.8842	0.9624	0.0010	0.9565	185320	178352	207	198
hg38.chr7_KI270809v1_alt	209586	GCA_028885625.2	0.8931	0.9675	0.0009	0.9698	187178	181091	199	193
hg38.chr7_KI270809v1_alt	209586	GCA_028885655.2	0.8924	0.9672	0.0009	0.9648	187032	180904	199	192
hg38.chr7_KI270809v1_alt	209586	GCA_029281585.2	0.9525	0.9900	0.0000	0.0000	199636	197649	0	0
hg38.chr7_KI270809v1_alt	209586	GCA_029289425.2	0.9882	0.9939	0.0000	0.0000	207112	205849	0	0
hg38.chr7_KI270809v1_alt	209586	hg38	1.0000	1.0000	0.0011	1.0000	209586	209586	227	227
hg38.chr7_KI270809v1_alt	209586	hs1	0.9977	0.9989	0.0011	1.0000	209112	208877	227	227
hg38.chr7_KI270899v1_alt	190869	GCA_028858775.2	0.8791	0.9850	0.0025	0.9263	167795	165279	475	440
hg38.chr7_KI270899v1_alt	190869	GCA_028878055.2	0.7655	0.9398	0.0000	0.0000	146116	137323	0	0
hg38.chr7_KI270899v1_alt	190869	GCA_028885625.2	0.8269	0.9468	0.0000	0.0000	157826	149425	0	0
hg38.chr7_KI270899v1_alt	190869	GCA_028885655.2	0.8261	0.9468	0.0000	0.0000	157678	149297	0	0
hg38.chr7_KI270899v1_alt	190869	GCA_029281585.2	0.9196	0.9779	0.0000	0.0000	175531	171658	0	0
hg38.chr7_KI270899v1_alt	190869	GCA_029289425.2	0.8803	0.9851	0.0000	0.0000	168025	165514	0	0
hg38.chr7_KI270899v1_alt	190869	hg38	1.0000	1.0000	0.0025	1.0000	190869	190869	480	480
hg38.chr7_KI270899v1_alt	190869	hs1	0.9880	0.9982	0.0000	0.0000	188584	188247	0	0
hg38.chr8	145138636	GCA_028858775.2	0.9602	0.9856	0.9066	0.9860	139356054	137355862	131581367	129732752
hg38.chr8	145138636	GCA_028878055.2	0.8946	0.9586	0.8494	0.9595	129837370	124468295	123281303	118285876
hg38.chr8	145138636	GCA_028885625.2	0.9320	0.9651	0.8831	0.9655	135275126	130555770	128168440	123747566
hg38.chr8	145138636	GCA_028885655.2	0.9322	0.9651	0.8830	0.9655	135301213	130582869	128164253	123744344
hg38.chr8	145138636	GCA_029281585.2	0.9559	0.9821	0.9052	0.9824	138734902	136245077	131378224	129064938
hg38.chr8	145138636	GCA_029289425.2	0.9590	0.9856	0.9054	0.9860	139188561	137185164	131404983	129561682
hg38.chr8	145138636	hg38	0.9974	1.0000	0.9485	1.0000	144765210	144765210	137669729	137669729
hg38.chr8	145138636	hs1	0.9894	0.9987	0.9406	0.9987	143602026	143409011	136520818	136341397
hg38.chr8_KI270810v1_alt	374415	GCA_028858775.2	0.9555	0.9854	0.0082	0.9889	357765	352525	3058	3024
hg38.chr8_KI270810v1_alt	374415	GCA_028878055.2	0.8684	0.9588	0.0081	0.9533	325158	311750	3038	2896
hg38.chr8_KI270810v1_alt	374415	GCA_028885625.2	0.8925	0.9664	0.0082	0.9634	334164	322939	3059	2947
hg38.chr8_KI270810v1_alt	374415	GCA_028885655.2	0.8903	0.9663	0.0082	0.9628	333346	322106	3061	2947
hg38.chr8_KI270810v1_alt	374415	GCA_029281585.2	0.9549	0.9820	0.0081	0.9800	357525	351094	3046	2985
hg38.chr8_KI270810v1_alt	374415	GCA_029289425.2	0.9568	0.9851	0.0082	0.9882	358255	352907	3058	3022
hg38.chr8_KI270810v1_alt	374415	hg38	1.0000	1.0000	0.0082	1.0000	374415	374415	3062	3062
hg38.chr8_KI270810v1_alt	374415	hs1	0.9995	0.9994	0.0082	1.0000	374226	373988	3062	3062
hg38.chr8_KI270811v1_alt	292436	GCA_028858775.2	0.9371	0.9736	0.0021	0.8785	274036	266810	601	528
hg38.chr8_KI270811v1_alt	292436	GCA_028878055.2	0.8436	0.9297	0.0008	0.8970	246690	229352	233	209
hg38.chr8_KI270811v1_alt	292436	GCA_028885625.2	0.8698	0.9448	0.0003	0.9700	254355	240324	100	97
hg38.chr8_KI270811v1_alt	292436	GCA_028885655.2	0.8723	0.9446	0.0003	0.9608	255081	240938	102	98
hg38.chr8_KI270811v1_alt	292436	GCA_029281585.2	0.9284	0.9661	0.0022	0.9053	271492	262294	655	593
hg38.chr8_KI270811v1_alt	292436	GCA_029289425.2	0.9356	0.9736	0.0024	0.8886	273601	266385	700	622
hg38.chr8_KI270811v1_alt	292436	hg38	1.0000	1.0000	0.0026	1.0000	292436	292436	764	764
hg38.chr8_KI270811v1_alt	292436	hs1	0.9864	0.9982	0.0000	0.0000	288463	287941	0	0
hg38.chr8_KI270812v1_alt	282736	GCA_028858775.2	0.9220	0.9730	0.0000	0.0000	260692	253664	0	0
hg38.chr8_KI270812v1_alt	282736	GCA_028878055.2	0.8561	0.9329	0.0000	0.0000	242043	225814	0	0
hg38.chr8_KI270812v1_alt	282736	GCA_028885625.2	0.8703	0.9462	0.0000	0.0000	246061	232814	0	0
hg38.chr8_KI270812v1_alt	282736	GCA_028885655.2	0.8782	0.9456	0.0000	0.0000	248292	234795	0	0
hg38.chr8_KI270812v1_alt	282736	GCA_029281585.2	0.8977	0.9674	0.0000	0.0000	253813	245527	0	0
hg38.chr8_KI270812v1_alt	282736	GCA_029289425.2	0.9101	0.9741	0.0000	0.0000	257324	250668	0	0
hg38.chr8_KI270812v1_alt	282736	hg38	1.0000	1.0000	0.0000	0.0000	282736	282736	0	0
hg38.chr8_KI270812v1_alt	282736	hs1	0.9590	0.9979	0.0000	0.0000	271157	270601	0	0
hg38.chr8_KI270813v1_alt	300230	GCA_028858775.2	0.7964	0.9793	0.0009	0.6511	239098	234160	278	181
hg38.chr8_KI270813v1_alt	300230	GCA_028878055.2	0.6459	0.9626	0.0000	0.0000	193932	186683	0	0
hg38.chr8_KI270813v1_alt	300230	GCA_028885625.2	0.5872	0.9534	0.0001	0.8750	176299	168083	16	14
hg38.chr8_KI270813v1_alt	300230	GCA_028885655.2	0.5871	0.9537	0.0001	0.8750	176280	168118	16	14
hg38.chr8_KI270813v1_alt	300230	GCA_029281585.2	0.8108	0.9741	0.0009	0.6228	243439	237128	281	175
hg38.chr8_KI270813v1_alt	300230	GCA_029289425.2	0.7964	0.9805	0.0009	0.6336	239102	234440	262	166
hg38.chr8_KI270813v1_alt	300230	hg38	1.0000	1.0000	0.0541	1.0000	300230	300230	16248	16248
hg38.chr8_KI270813v1_alt	300230	hs1	0.8654	0.9972	0.0010	0.6643	259812	259085	286	190
hg38.chr8_KI270814v1_alt	141812	GCA_028858775.2	0.8080	0.9510	0.0000	0.0000	114589	108979	0	0
hg38.chr8_KI270814v1_alt	141812	GCA_028878055.2	0.4286	0.9098	0.0000	0.0000	60776	55296	0	0
hg38.chr8_KI270814v1_alt	141812	GCA_028885625.2	0.8076	0.9513	0.0000	0.0000	114530	108947	0	0
hg38.chr8_KI270814v1_alt	141812	GCA_028885655.2	0.7763	0.9510	0.0000	0.0000	110091	104695	0	0
hg38.chr8_KI270814v1_alt	141812	GCA_029281585.2	0.8683	0.9738	0.0000	0.0000	123136	119910	0	0
hg38.chr8_KI270814v1_alt	141812	GCA_029289425.2	0.8432	0.9517	0.0000	0.0000	119576	113805	0	0
hg38.chr8_KI270814v1_alt	141812	hg38	1.0000	1.0000	0.0012	1.0000	141812	141812	170	170
hg38.chr8_KI270814v1_alt	141812	hs1	0.9987	0.9997	0.0012	1.0000	141624	141587	170	170
hg38.chr8_KI270815v1_alt	132244	GCA_028858775.2	0.9428	0.9837	0.0089	0.9744	124678	122641	1174	1144
hg38.chr8_KI270815v1_alt	132244	GCA_028878055.2	0.8673	0.9550	0.0085	0.9473	114695	109529	1120	1061
hg38.chr8_KI270815v1_alt	132244	GCA_028885625.2	0.9538	0.9611	0.0086	0.9454	126129	121220	1136	1074
hg38.chr8_KI270815v1_alt	132244	GCA_028885655.2	0.9412	0.9607	0.0086	0.9498	124467	119570	1136	1079
hg38.chr8_KI270815v1_alt	132244	GCA_029281585.2	0.9509	0.9802	0.0087	0.9747	125753	123266	1145	1116
hg38.chr8_KI270815v1_alt	132244	GCA_029289425.2	0.9530	0.9827	0.0089	0.9770	126035	123857	1173	1146
hg38.chr8_KI270815v1_alt	132244	hg38	1.0000	1.0000	0.0089	1.0000	132244	132244	1174	1174
hg38.chr8_KI270815v1_alt	132244	hs1	0.9903	0.9996	0.0089	1.0000	130967	130917	1173	1173
hg38.chr8_KI270816v1_alt	305841	GCA_028858775.2	0.9800	0.9841	0.0000	0.0000	299714	294937	0	0
hg38.chr8_KI270816v1_alt	305841	GCA_028878055.2	0.8901	0.9517	0.0000	0.0000	272217	259069	0	0
hg38.chr8_KI270816v1_alt	305841	GCA_028885625.2	0.9587	0.9574	0.0000	0.0000	293206	280708	0	0
hg38.chr8_KI270816v1_alt	305841	GCA_028885655.2	0.9591	0.9576	0.0000	0.0000	293332	280897	0	0
hg38.chr8_KI270816v1_alt	305841	GCA_029281585.2	0.9731	0.9793	0.0000	0.0000	297612	291458	0	0
hg38.chr8_KI270816v1_alt	305841	GCA_029289425.2	0.9844	0.9843	0.0000	0.0000	301063	296325	0	0
hg38.chr8_KI270816v1_alt	305841	hg38	1.0000	1.0000	0.0002	1.0000	305841	305841	68	68
hg38.chr8_KI270816v1_alt	305841	hs1	0.9946	0.9985	0.0002	0.7018	304180	303713	57	40
hg38.chr8_KI270817v1_alt	158983	GCA_028858775.2	0.9364	0.9806	0.0000	0.0000	148876	145981	0	0
hg38.chr8_KI270817v1_alt	158983	GCA_028878055.2	0.8673	0.9466	0.0000	0.0000	137880	130522	0	0
hg38.chr8_KI270817v1_alt	158983	GCA_028885625.2	0.9028	0.9524	0.0047	0.8964	143527	136690	753	675
hg38.chr8_KI270817v1_alt	158983	GCA_028885655.2	0.9077	0.9518	0.0047	0.8805	144315	137354	753	663
hg38.chr8_KI270817v1_alt	158983	GCA_029281585.2	0.9512	0.9745	0.0047	0.8871	151232	147376	753	668
hg38.chr8_KI270817v1_alt	158983	GCA_029289425.2	0.9500	0.9793	0.0047	0.9177	151038	147917	753	691
hg38.chr8_KI270817v1_alt	158983	hg38	1.0000	1.0000	0.0047	1.0000	158983	158983	753	753
hg38.chr8_KI270817v1_alt	158983	hs1	0.9606	0.9974	0.0000	0.0000	152725	152328	0	0
hg38.chr8_KI270818v1_alt	145606	GCA_028858775.2	0.9687	0.9792	0.0009	0.9338	141042	138109	136	127
hg38.chr8_KI270818v1_alt	145606	GCA_028878055.2	0.8887	0.9397	0.0009	0.8915	129403	121595	129	115
hg38.chr8_KI270818v1_alt	145606	GCA_028885625.2	0.8867	0.9531	0.0009	0.8971	129107	123056	136	122
hg38.chr8_KI270818v1_alt	145606	GCA_028885655.2	0.8881	0.9529	0.0009	0.9265	129316	123222	136	126
hg38.chr8_KI270818v1_alt	145606	GCA_029281585.2	0.9572	0.9733	0.0000	0.0000	139377	135655	0	0
hg38.chr8_KI270818v1_alt	145606	GCA_029289425.2	0.9680	0.9794	0.0009	0.9338	140943	138034	136	127
hg38.chr8_KI270818v1_alt	145606	hg38	1.0000	1.0000	0.0009	1.0000	145606	145606	136	136
hg38.chr8_KI270818v1_alt	145606	hs1	0.9846	0.9983	0.0000	0.0000	143365	143118	0	0
hg38.chr8_KI270819v1_alt	133535	GCA_028858775.2	0.7371	0.9824	0.1538	0.9783	98422	96685	20540	20094
hg38.chr8_KI270819v1_alt	133535	GCA_028878055.2	0.7337	0.9515	0.1466	0.9489	97981	93230	19574	18573
hg38.chr8_KI270819v1_alt	133535	GCA_028885625.2	0.7410	0.9561	0.1468	0.9566	98946	94604	19609	18757
hg38.chr8_KI270819v1_alt	133535	GCA_028885655.2	0.7424	0.9559	0.1477	0.9557	99140	94771	19725	18851
hg38.chr8_KI270819v1_alt	133535	GCA_029281585.2	0.7564	0.9790	0.1502	0.9806	101002	98880	20057	19668
hg38.chr8_KI270819v1_alt	133535	GCA_029289425.2	0.7359	0.9825	0.1538	0.9780	98274	96559	20537	20086
hg38.chr8_KI270819v1_alt	133535	hg38	0.8441	1.0000	0.2283	1.0000	112713	112713	30483	30483
hg38.chr8_KI270819v1_alt	133535	hs1	0.7694	0.9995	0.1549	0.9997	102738	102683	20686	20679
hg38.chr8_KI270820v1_alt	36640	GCA_028858775.2	0.9914	0.9808	0.0779	0.9566	36326	35629	2854	2730
hg38.chr8_KI270820v1_alt	36640	GCA_028878055.2	0.9767	0.9425	0.0781	0.9312	35785	33726	2862	2665
hg38.chr8_KI270820v1_alt	36640	GCA_028885625.2	0.9788	0.9488	0.0785	0.9374	35864	34029	2877	2697
hg38.chr8_KI270820v1_alt	36640	GCA_028885655.2	0.9779	0.9494	0.0785	0.9381	35832	34020	2877	2699
hg38.chr8_KI270820v1_alt	36640	GCA_029281585.2	0.9923	0.9737	0.0781	0.9577	36357	35402	2862	2741
hg38.chr8_KI270820v1_alt	36640	GCA_029289425.2	0.9933	0.9805	0.0796	0.9571	36394	35684	2915	2790
hg38.chr8_KI270820v1_alt	36640	hg38	1.0000	1.0000	0.0822	1.0000	36640	36640	3012	3012
hg38.chr8_KI270820v1_alt	36640	hs1	0.9970	0.9971	0.0799	0.9737	36531	36425	2927	2850
hg38.chr8_KI270821v1_alt	985506	GCA_028858775.2	0.9525	0.9747	0.0000	1.0000	938678	914948	48	48
hg38.chr8_KI270821v1_alt	985506	GCA_028878055.2	0.8333	0.9400	0.0043	0.9396	821245	771997	4223	3968
hg38.chr8_KI270821v1_alt	985506	GCA_028885625.2	0.8931	0.9531	0.0043	0.9460	880157	838834	4280	4049
hg38.chr8_KI270821v1_alt	985506	GCA_028885655.2	0.9096	0.9531	0.0044	0.9466	896444	854403	4288	4059
hg38.chr8_KI270821v1_alt	985506	GCA_029281585.2	0.9388	0.9712	0.0001	0.8596	925190	898517	57	49
hg38.chr8_KI270821v1_alt	985506	GCA_029289425.2	0.9627	0.9746	0.0001	1.0000	948719	924598	54	54
hg38.chr8_KI270821v1_alt	985506	hg38	1.0000	1.0000	0.0046	1.0000	985506	985506	4542	4542
hg38.chr8_KI270821v1_alt	985506	hs1	0.9682	0.9969	0.0000	1.0000	954154	951230	6	6
hg38.chr8_KI270822v1_alt	624492	GCA_028858775.2	0.9733	0.9871	0.0000	0.0000	607832	599994	0	0
hg38.chr8_KI270822v1_alt	624492	GCA_028878055.2	0.4089	0.9626	0.0000	0.0000	255379	245820	0	0
hg38.chr8_KI270822v1_alt	624492	GCA_028885625.2	0.9279	0.9673	0.0000	0.0000	579453	560531	0	0
hg38.chr8_KI270822v1_alt	624492	GCA_028885655.2	0.9279	0.9674	0.0000	0.0000	579482	560584	0	0
hg38.chr8_KI270822v1_alt	624492	GCA_029281585.2	0.9630	0.9839	0.0000	0.0000	601415	591731	0	0
hg38.chr8_KI270822v1_alt	624492	GCA_029289425.2	0.9723	0.9869	0.0000	0.0000	607212	599281	0	0
hg38.chr8_KI270822v1_alt	624492	hg38	1.0000	1.0000	0.0000	0.0000	624492	624492	0	0
hg38.chr8_KI270822v1_alt	624492	hs1	0.9995	0.9993	0.0000	0.0000	624173	623738	0	0
hg38.chr8_KI270900v1_alt	318687	GCA_028858775.2	0.8998	0.9752	0.0014	0.8851	286750	279651	444	393
hg38.chr8_KI270900v1_alt	318687	GCA_028878055.2	0.8232	0.9346	0.0010	0.9048	262334	245173	315	285
hg38.chr8_KI270900v1_alt	318687	GCA_028885625.2	0.8386	0.9491	0.0010	0.8984	267258	253649	315	283
hg38.chr8_KI270900v1_alt	318687	GCA_028885655.2	0.8402	0.9492	0.0010	0.8825	267772	254159	315	278
hg38.chr8_KI270900v1_alt	318687	GCA_029281585.2	0.8909	0.9703	0.0012	0.8895	283910	275491	380	338
hg38.chr8_KI270900v1_alt	318687	GCA_029289425.2	0.9001	0.9757	0.0002	0.9231	286838	279867	65	60
hg38.chr8_KI270900v1_alt	318687	hg38	1.0000	1.0000	0.0030	1.0000	318687	318687	943	943
hg38.chr8_KI270900v1_alt	318687	hs1	0.9432	0.9964	0.0020	0.9362	300594	299509	643	602
hg38.chr8_KI270901v1_alt	136959	GCA_028858775.2	0.9389	0.9733	0.0000	0.0000	128594	125159	0	0
hg38.chr8_KI270901v1_alt	136959	GCA_028878055.2	0.8452	0.9309	0.0000	0.0000	115763	107761	0	0
hg38.chr8_KI270901v1_alt	136959	GCA_028885625.2	0.8462	0.9468	0.0000	0.0000	115901	109736	0	0
hg38.chr8_KI270901v1_alt	136959	GCA_028885655.2	0.8500	0.9471	0.0000	0.0000	116416	110253	0	0
hg38.chr8_KI270901v1_alt	136959	GCA_029281585.2	0.9412	0.9671	0.0000	0.0000	128906	124665	0	0
hg38.chr8_KI270901v1_alt	136959	GCA_029289425.2	0.9426	0.9733	0.0000	0.0000	129092	125643	0	0
hg38.chr8_KI270901v1_alt	136959	hg38	1.0000	1.0000	0.0000	0.0000	136959	136959	0	0
hg38.chr8_KI270901v1_alt	136959	hs1	0.9943	0.9971	0.0000	0.0000	136179	135782	0	0
hg38.chr8_KI270926v1_alt	229282	GCA_028858775.2	0.9352	0.9748	0.0000	0.0000	214420	209008	0	0
hg38.chr8_KI270926v1_alt	229282	GCA_028878055.2	0.8888	0.9375	0.0000	0.0000	203781	191045	0	0
hg38.chr8_KI270926v1_alt	229282	GCA_028885625.2	0.9064	0.9503	0.0000	0.0000	207819	197499	0	0
hg38.chr8_KI270926v1_alt	229282	GCA_028885655.2	0.9065	0.9504	0.0000	0.0000	207854	197553	0	0
hg38.chr8_KI270926v1_alt	229282	GCA_029281585.2	0.9429	0.9717	0.0000	0.0000	216198	210086	0	0
hg38.chr8_KI270926v1_alt	229282	GCA_029289425.2	0.9387	0.9753	0.0000	0.0000	215219	209893	0	0
hg38.chr8_KI270926v1_alt	229282	hg38	1.0000	1.0000	0.0000	0.0000	229282	229282	0	0
hg38.chr8_KI270926v1_alt	229282	hs1	0.9951	0.9977	0.0000	0.0000	228161	227635	0	0
hg38.chr9	138394717	GCA_028858775.2	0.8368	0.9865	0.7412	0.9864	115811012	114249800	102578722	101188161
hg38.chr9	138394717	GCA_028878055.2	0.7815	0.9601	0.6971	0.9607	108154899	103834402	96476799	92687514
hg38.chr9	138394717	GCA_028885625.2	0.8139	0.9676	0.7222	0.9678	112646097	108991845	99942569	96726093
hg38.chr9	138394717	GCA_028885655.2	0.8141	0.9675	0.7225	0.9678	112665570	109008132	99984130	96767357
hg38.chr9	138394717	GCA_029281585.2	0.8359	0.9832	0.7358	0.9831	115688588	113744601	101831782	100108007
hg38.chr9	138394717	GCA_029289425.2	0.8366	0.9866	0.7401	0.9865	115775668	114218865	102420489	101033248
hg38.chr9	138394717	hg38	0.8630	1.0000	0.7641	1.0000	119436918	119436918	105744772	105744772
hg38.chr9	138394717	hs1	0.8596	0.9987	0.7618	0.9987	118968001	118809129	105430785	105297970
hg38.chr9_GL383539v1_alt	162988	GCA_028858775.2	0.9300	0.9834	0.0000	0.0000	151586	149073	0	0
hg38.chr9_GL383539v1_alt	162988	GCA_028878055.2	0.9574	0.9587	0.0000	0.0000	156049	149610	0	0
hg38.chr9_GL383539v1_alt	162988	GCA_028885625.2	0.9897	0.9678	0.0000	0.0000	161306	156114	0	0
hg38.chr9_GL383539v1_alt	162988	GCA_028885655.2	0.9897	0.9680	0.0000	0.0000	161312	156149	0	0
hg38.chr9_GL383539v1_alt	162988	GCA_029281585.2	0.9936	0.9828	0.0000	0.0000	161945	159160	0	0
hg38.chr9_GL383539v1_alt	162988	GCA_029289425.2	0.9300	0.9832	0.0000	0.0000	151574	149034	0	0
hg38.chr9_GL383539v1_alt	162988	hg38	1.0000	1.0000	0.0000	0.0000	162988	162988	0	0
hg38.chr9_GL383539v1_alt	162988	hs1	0.9997	0.9980	0.0000	0.0000	162945	162611	0	0
hg38.chr9_GL383540v1_alt	71551	GCA_028858775.2	0.9944	0.9848	0.0000	0.0000	71153	70071	0	0
hg38.chr9_GL383540v1_alt	71551	GCA_028878055.2	0.9816	0.9586	0.0000	0.0000	70232	67326	0	0
hg38.chr9_GL383540v1_alt	71551	GCA_028885625.2	0.9915	0.9681	0.0000	0.0000	70943	68677	0	0
hg38.chr9_GL383540v1_alt	71551	GCA_028885655.2	0.9914	0.9677	0.0000	0.0000	70934	68645	0	0
hg38.chr9_GL383540v1_alt	71551	GCA_029281585.2	0.9950	0.9806	0.0000	0.0000	71190	69812	0	0
hg38.chr9_GL383540v1_alt	71551	GCA_029289425.2	0.9948	0.9851	0.0000	0.0000	71177	70116	0	0
hg38.chr9_GL383540v1_alt	71551	hg38	1.0000	1.0000	0.0000	0.0000	71551	71551	0	0
hg38.chr9_GL383540v1_alt	71551	hs1	1.0000	0.9998	0.0000	0.0000	71548	71537	0	0
hg38.chr9_GL383541v1_alt	171286	GCA_028858775.2	0.9599	0.9901	0.0000	0.0000	164414	162779	0	0
hg38.chr9_GL383541v1_alt	171286	GCA_028878055.2	0.9273	0.9629	0.0000	0.0000	158838	152950	0	0
hg38.chr9_GL383541v1_alt	171286	GCA_028885625.2	0.9172	0.9742	0.0000	0.0000	157096	153037	0	0
hg38.chr9_GL383541v1_alt	171286	GCA_028885655.2	0.9178	0.9740	0.0000	0.0000	157200	153118	0	0
hg38.chr9_GL383541v1_alt	171286	GCA_029281585.2	0.9576	0.9854	0.0000	0.0000	164032	161631	0	0
hg38.chr9_GL383541v1_alt	171286	GCA_029289425.2	0.9602	0.9901	0.0000	0.0000	164467	162844	0	0
hg38.chr9_GL383541v1_alt	171286	hg38	1.0000	1.0000	0.0000	0.0000	171286	171286	0	0
hg38.chr9_GL383541v1_alt	171286	hs1	0.9638	0.9987	0.0000	0.0000	165084	164870	0	0
hg38.chr9_GL383542v1_alt	60032	GCA_028858775.2	0.8606	0.9859	0.0511	0.9791	51663	50936	3068	3004
hg38.chr9_GL383542v1_alt	60032	GCA_028878055.2	0.6726	0.9584	0.0433	0.9472	40380	38701	2597	2460
hg38.chr9_GL383542v1_alt	60032	GCA_028885625.2	0.8569	0.9672	0.0508	0.9620	51439	49753	3051	2935
hg38.chr9_GL383542v1_alt	60032	GCA_028885655.2	0.8489	0.9670	0.0509	0.9620	50962	49280	3053	2937
hg38.chr9_GL383542v1_alt	60032	GCA_029281585.2	0.7566	0.9863	0.0132	0.9848	45422	44798	791	779
hg38.chr9_GL383542v1_alt	60032	GCA_029289425.2	0.8604	0.9864	0.0512	0.9811	51652	50952	3073	3015
hg38.chr9_GL383542v1_alt	60032	hg38	1.0000	1.0000	0.1831	1.0000	60032	60032	10994	10994
hg38.chr9_GL383542v1_alt	60032	hs1	0.8135	0.9975	0.0000	0.0000	48834	48711	0	0
hg38.chr9_KI270717v1_random	40062	GCA_028858775.2	0.8499	0.9851	0.0005	0.9048	34049	33540	21	19
hg38.chr9_KI270717v1_random	40062	GCA_028878055.2	0.4415	0.9593	0.0000	0.0000	17686	16967	0	0
hg38.chr9_KI270717v1_random	40062	GCA_028885625.2	0.7711	0.9719	0.0000	0.0000	30892	30025	0	0
hg38.chr9_KI270717v1_random	40062	GCA_028885655.2	0.7706	0.9724	0.0000	0.0000	30872	30021	0	0
hg38.chr9_KI270717v1_random	40062	GCA_029281585.2	0.8336	0.9884	0.0000	0.0000	33396	33009	0	0
hg38.chr9_KI270717v1_random	40062	GCA_029289425.2	0.8643	0.9842	0.0000	0.0000	34627	34079	0	0
hg38.chr9_KI270717v1_random	40062	hg38	1.0000	1.0000	0.0472	1.0000	40062	40062	1892	1892
hg38.chr9_KI270717v1_random	40062	hs1	0.9989	0.9991	0.0472	0.9989	40017	39981	1892	1890
hg38.chr9_KI270718v1_random	38054	GCA_028858775.2	0.5627	0.9367	0.0000	0.0000	21413	20057	0	0
hg38.chr9_KI270718v1_random	38054	GCA_028878055.2	0.4843	0.9462	0.0000	0.0000	18431	17439	0	0
hg38.chr9_KI270718v1_random	38054	GCA_028885625.2	0.5873	0.9495	0.0000	0.0000	22348	21220	0	0
hg38.chr9_KI270718v1_random	38054	GCA_028885655.2	0.5872	0.9493	0.0000	0.0000	22347	21213	0	0
hg38.chr9_KI270718v1_random	38054	GCA_029281585.2	0.6712	0.9490	0.0011	0.4878	25543	24241	41	20
hg38.chr9_KI270718v1_random	38054	GCA_029289425.2	0.5725	0.9496	0.0007	1.0000	21787	20688	26	26
hg38.chr9_KI270718v1_random	38054	hg38	1.0000	1.0000	0.1234	1.0000	38054	38054	4696	4696
hg38.chr9_KI270718v1_random	38054	hs1	0.9994	0.9985	0.0710	0.9967	38031	37975	2702	2693
hg38.chr9_KI270719v1_random	176845	GCA_028858775.2	0.9475	0.9930	0.0000	0.0000	167560	166395	0	0
hg38.chr9_KI270719v1_random	176845	GCA_028878055.2	0.7031	0.9465	0.0000	0.0000	124343	117691	0	0
hg38.chr9_KI270719v1_random	176845	GCA_028885625.2	0.7532	0.9621	0.0000	0.0000	133196	128152	0	0
hg38.chr9_KI270719v1_random	176845	GCA_028885655.2	0.7584	0.9620	0.0000	0.0000	134123	129023	0	0
hg38.chr9_KI270719v1_random	176845	GCA_029281585.2	0.8698	0.9886	0.0000	0.0000	153821	152067	0	0
hg38.chr9_KI270719v1_random	176845	GCA_029289425.2	0.9478	0.9930	0.0000	0.0000	167620	166454	0	0
hg38.chr9_KI270719v1_random	176845	hg38	1.0000	1.0000	0.0002	1.0000	176845	176845	42	42
hg38.chr9_KI270719v1_random	176845	hs1	1.0000	0.9995	0.0000	1.0000	176839	176743	1	1
hg38.chr9_KI270720v1_random	39050	GCA_028858775.2	0.5918	0.9820	0.0000	0.0000	23111	22696	0	0
hg38.chr9_KI270720v1_random	39050	GCA_028878055.2	0.3755	0.9438	0.0000	0.0000	14664	13840	0	0
hg38.chr9_KI270720v1_random	39050	GCA_028885625.2	0.4729	0.9617	0.0000	0.0000	18467	17760	0	0
hg38.chr9_KI270720v1_random	39050	GCA_028885655.2	0.4729	0.9622	0.0000	0.0000	18467	17769	0	0
hg38.chr9_KI270720v1_random	39050	GCA_029281585.2	0.5367	0.9826	0.0000	0.0000	20958	20594	0	0
hg38.chr9_KI270720v1_random	39050	GCA_029289425.2	0.5918	0.9823	0.0000	0.0000	23111	22701	0	0
hg38.chr9_KI270720v1_random	39050	hg38	1.0000	1.0000	0.0474	1.0000	39050	39050	1851	1851
hg38.chr9_KI270720v1_random	39050	hs1	0.9953	0.9993	0.0022	0.9884	38868	38839	86	85
hg38.chr9_KI270823v1_alt	439082	GCA_028858775.2	0.9546	0.9872	0.0019	0.9894	419147	413766	849	840
hg38.chr9_KI270823v1_alt	439082	GCA_028878055.2	0.9310	0.9633	0.0019	0.9670	408792	393806	848	820
hg38.chr9_KI270823v1_alt	439082	GCA_028885625.2	0.9350	0.9688	0.0019	0.9788	410541	397715	849	831
hg38.chr9_KI270823v1_alt	439082	GCA_028885655.2	0.9348	0.9690	0.0019	0.9812	410448	397722	849	833
hg38.chr9_KI270823v1_alt	439082	GCA_029281585.2	0.9604	0.9844	0.0019	0.9776	421685	415107	848	829
hg38.chr9_KI270823v1_alt	439082	GCA_029289425.2	0.9544	0.9872	0.0019	0.9894	419077	413733	849	840
hg38.chr9_KI270823v1_alt	439082	hg38	1.0000	1.0000	0.0019	1.0000	439082	439082	850	850
hg38.chr9_KI270823v1_alt	439082	hs1	0.9778	0.9989	0.0000	0.0000	429319	428845	0	0
hg38.chrUn_GL000195v1	182896	GCA_028858775.2	0.9099	0.9874	0.0000	0.0000	166426	164323	0	0
hg38.chrUn_GL000195v1	182896	GCA_028878055.2	0.6802	0.9282	0.0000	0.7778	124413	115484	9	7
hg38.chrUn_GL000195v1	182896	GCA_028885625.2	0.7639	0.9593	0.0000	0.0000	139714	134030	0	0
hg38.chrUn_GL000195v1	182896	GCA_028885655.2	0.7643	0.9599	0.0000	0.0000	139783	134173	0	0
hg38.chrUn_GL000195v1	182896	GCA_029281585.2	0.8516	0.9717	0.0000	0.0000	155757	151345	0	0
hg38.chrUn_GL000195v1	182896	GCA_029289425.2	0.9095	0.9808	0.0000	0.0000	166349	163149	0	0
hg38.chrUn_GL000195v1	182896	hg38	1.0000	1.0000	0.0018	1.0000	182896	182896	325	325
hg38.chrUn_GL000195v1	182896	hs1	0.9998	0.9984	0.0001	1.0000	182853	182569	26	26
hg38.chrUn_GL000213v1	164239	GCA_028858775.2	0.9714	0.9931	0.0000	0.0000	159545	158437	0	0
hg38.chrUn_GL000213v1	164239	GCA_028878055.2	0.4259	0.9503	0.0000	0.0000	69956	66476	0	0
hg38.chrUn_GL000213v1	164239	GCA_028885625.2	0.6041	0.9569	0.0000	0.0000	99216	94943	0	0
hg38.chrUn_GL000213v1	164239	GCA_028885655.2	0.6041	0.9568	0.0000	0.0000	99222	94934	0	0
hg38.chrUn_GL000213v1	164239	GCA_029281585.2	0.9098	0.9839	0.0000	0.0000	149430	147019	0	0
hg38.chrUn_GL000213v1	164239	GCA_029289425.2	0.9444	0.9827	0.0000	0.0000	155112	152432	0	0
hg38.chrUn_GL000213v1	164239	hg38	1.0000	1.0000	0.0000	0.0000	164239	164239	0	0
hg38.chrUn_GL000213v1	164239	hs1	0.9958	0.9987	0.0000	0.0000	163550	163343	0	0
hg38.chrUn_GL000214v1	137718	GCA_028858775.2	0.6428	0.9825	0.0000	0.0000	88531	86982	0	0
hg38.chrUn_GL000214v1	137718	GCA_028878055.2	0.4989	0.9431	0.0000	0.0000	68707	64801	0	0
hg38.chrUn_GL000214v1	137718	GCA_028885625.2	0.5596	0.9593	0.0000	0.0000	77067	73933	0	0
hg38.chrUn_GL000214v1	137718	GCA_028885655.2	0.5584	0.9580	0.0000	0.0000	76897	73671	0	0
hg38.chrUn_GL000214v1	137718	GCA_029281585.2	0.6308	0.9751	0.0000	0.0000	86874	84710	0	0
hg38.chrUn_GL000214v1	137718	GCA_029289425.2	0.6429	0.9824	0.0000	0.0000	88537	86975	0	0
hg38.chrUn_GL000214v1	137718	hg38	1.0000	1.0000	0.2295	1.0000	137718	137718	31600	31600
hg38.chrUn_GL000214v1	137718	hs1	0.9520	0.9967	0.1828	0.9872	131102	130672	25177	24855
hg38.chrUn_GL000216v2	176608	GCA_028858775.2	0.2513	0.9493	0.0000	0.0000	44386	42134	0	0
hg38.chrUn_GL000216v2	176608	GCA_028878055.2	0.2475	0.9354	0.0000	0.0000	43710	40885	0	0
hg38.chrUn_GL000216v2	176608	GCA_028885625.2	0.2467	0.9424	0.0000	0.0000	43576	41064	0	0
hg38.chrUn_GL000216v2	176608	GCA_028885655.2	0.2467	0.9423	0.0000	0.0000	43574	41058	0	0
hg38.chrUn_GL000216v2	176608	GCA_029281585.2	0.2511	0.9502	0.0000	0.0000	44355	42146	0	0
hg38.chrUn_GL000216v2	176608	GCA_029289425.2	0.2514	0.9499	0.0000	0.0000	44394	42172	0	0
hg38.chrUn_GL000216v2	176608	hg38	0.9987	1.0000	0.4781	1.0000	176372	176372	84429	84429
hg38.chrUn_GL000216v2	176608	hs1	0.8743	0.9233	0.0460	0.8894	154414	142567	8116	7218
hg38.chrUn_GL000218v1	161147	GCA_028858775.2	0.9555	0.9848	0.0000	1.0000	153976	151631	1	1
hg38.chrUn_GL000218v1	161147	GCA_028878055.2	0.4971	0.9276	0.0000	0.0000	80103	74304	0	0
hg38.chrUn_GL000218v1	161147	GCA_028885625.2	0.6011	0.9551	0.0000	0.0000	96867	92519	0	0
hg38.chrUn_GL000218v1	161147	GCA_028885655.2	0.6005	0.9547	0.0000	0.0000	96770	92390	0	0
hg38.chrUn_GL000218v1	161147	GCA_029281585.2	0.7228	0.9740	0.0013	0.7970	116476	113450	202	161
hg38.chrUn_GL000218v1	161147	GCA_029289425.2	0.9548	0.9840	0.0013	0.7991	153862	151394	214	171
hg38.chrUn_GL000218v1	161147	hg38	1.0000	1.0000	0.0019	1.0000	161147	161147	304	304
hg38.chrUn_GL000218v1	161147	hs1	0.9999	1.0000	0.0019	1.0000	161135	161130	304	304
hg38.chrUn_GL000219v1	179198	GCA_028858775.2	0.6654	0.9585	0.0008	0.7063	119239	114286	143	101
hg38.chrUn_GL000219v1	179198	GCA_028878055.2	0.3619	0.9595	0.0000	0.0000	64856	62229	0	0
hg38.chrUn_GL000219v1	179198	GCA_028885625.2	0.4483	0.9600	0.0000	0.0000	80327	77112	0	0
hg38.chrUn_GL000219v1	179198	GCA_028885655.2	0.4483	0.9609	0.0000	0.0000	80336	77195	0	0
hg38.chrUn_GL000219v1	179198	GCA_029281585.2	0.5645	0.9753	0.0000	0.0000	101151	98652	0	0
hg38.chrUn_GL000219v1	179198	GCA_029289425.2	0.6655	0.9605	0.0007	0.7009	119264	114551	117	82
hg38.chrUn_GL000219v1	179198	hg38	1.0000	1.0000	0.1389	1.0000	179198	179198	24892	24892
hg38.chrUn_GL000219v1	179198	hs1	0.9981	0.9998	0.0576	0.9997	178866	178834	10328	10325
hg38.chrUn_GL000220v1	161802	GCA_028858775.2	0.7797	0.9614	0.0000	0.0000	126163	121298	0	0
hg38.chrUn_GL000220v1	161802	GCA_028878055.2	0.2655	0.8939	0.0000	0.0000	42962	38402	0	0
hg38.chrUn_GL000220v1	161802	GCA_028885625.2	0.4412	0.9242	0.0000	0.0000	71382	65972	0	0
hg38.chrUn_GL000220v1	161802	GCA_028885655.2	0.4415	0.9274	0.0000	0.0000	71438	66255	0	0
hg38.chrUn_GL000220v1	161802	GCA_029281585.2	0.6964	0.9599	0.0000	0.0000	112673	108160	0	0
hg38.chrUn_GL000220v1	161802	GCA_029289425.2	0.7770	0.9601	0.0000	0.0000	125718	120700	0	0
hg38.chrUn_GL000220v1	161802	hg38	1.0000	1.0000	0.0003	1.0000	161802	161802	46	46
hg38.chrUn_GL000220v1	161802	hs1	0.9351	0.9946	0.0000	0.0000	151307	150497	0	0
hg38.chrUn_GL000224v1	179693	GCA_028858775.2	0.5646	0.9258	0.0000	0.0000	101454	93926	0	0
hg38.chrUn_GL000224v1	179693	GCA_028878055.2	0.3030	0.9224	0.0000	0.8571	54449	50225	7	6
hg38.chrUn_GL000224v1	179693	GCA_028885625.2	0.4239	0.9354	0.0000	0.0000	76172	71252	0	0
hg38.chrUn_GL000224v1	179693	GCA_028885655.2	0.4221	0.9347	0.0000	0.0000	75845	70891	0	0
hg38.chrUn_GL000224v1	179693	GCA_029281585.2	0.6019	0.9436	0.0008	0.7413	108154	102053	143	106
hg38.chrUn_GL000224v1	179693	GCA_029289425.2	0.5497	0.9305	0.0000	0.0000	98780	91916	0	0
hg38.chrUn_GL000224v1	179693	hg38	1.0000	1.0000	0.1825	1.0000	179693	179693	32788	32788
hg38.chrUn_GL000224v1	179693	hs1	0.9964	0.9987	0.1651	0.9953	179053	178820	29671	29533
hg38.chrUn_KI270366v1	8320	hg38	0.9976	1.0000	0.9976	1.0000	8300	8300	8300	8300
hg38.chrUn_KI270366v1	8320	hs1	0.9953	0.9943	0.9953	0.9943	8281	8234	8281	8234
hg38.chrUn_KI270442v1	392061	GCA_028858775.2	0.2872	0.9523	0.0030	0.8297	112597	107224	1186	984
hg38.chrUn_KI270442v1	392061	GCA_028878055.2	0.0807	0.9218	0.0000	0.0000	31630	29157	0	0
hg38.chrUn_KI270442v1	392061	GCA_028885625.2	0.0969	0.8865	0.0000	0.0000	37976	33664	0	0
hg38.chrUn_KI270442v1	392061	GCA_028885655.2	0.0969	0.8865	0.0000	0.0000	37975	33665	0	0
hg38.chrUn_KI270442v1	392061	GCA_029281585.2	0.1973	0.9534	0.0000	1.0000	77340	73734	2	2
hg38.chrUn_KI270442v1	392061	GCA_029289425.2	0.2856	0.9531	0.0030	0.8322	111964	106716	1186	987
hg38.chrUn_KI270442v1	392061	hg38	0.9458	1.0000	0.3667	1.0000	370796	370796	143766	143766
hg38.chrUn_KI270442v1	392061	hs1	0.9154	0.9544	0.2857	0.8662	358878	342502	112021	97036
hg38.chrUn_KI270448v1	7992	GCA_028858775.2	0.8249	0.9372	0.0000	0.0000	6593	6179	0	0
hg38.chrUn_KI270448v1	7992	GCA_029289425.2	0.8249	0.9026	0.1021	0.9461	6593	5951	816	772
hg38.chrUn_KI270448v1	7992	hg38	1.0000	1.0000	0.1565	1.0000	7992	7992	1251	1251
hg38.chrUn_KI270448v1	7992	hs1	0.9995	0.9996	0.1565	0.9992	7988	7985	1251	1250
hg38.chrUn_KI270519v1	138126	hg38	0.9967	1.0000	0.9967	1.0000	137668	137668	137668	137668
hg38.chrUn_KI270519v1	138126	hs1	0.9900	0.9865	0.9900	0.9865	136747	134896	136747	134896
hg38.chrUn_KI270521v1	7642	GCA_028858775.2	0.6106	0.9552	0.0000	0.0000	4666	4457	0	0
hg38.chrUn_KI270521v1	7642	GCA_029289425.2	0.6106	0.9316	0.0977	0.8514	4666	4347	747	636
hg38.chrUn_KI270521v1	7642	hg38	1.0000	1.0000	0.5124	1.0000	7642	7642	3916	3916
hg38.chrUn_KI270521v1	7642	hs1	1.0000	0.9982	0.5124	0.9967	7642	7628	3916	3903
hg38.chrUn_KI270579v1	31033	GCA_028858775.2	0.9419	0.9643	0.0000	0.0000	29230	28187	0	0
hg38.chrUn_KI270579v1	31033	GCA_029281585.2	0.7877	0.9022	0.0000	0.0000	24446	22054	0	0
hg38.chrUn_KI270579v1	31033	GCA_029289425.2	0.9412	0.9725	0.0000	0.0000	29209	28406	0	0
hg38.chrUn_KI270579v1	31033	hg38	0.9668	1.0000	0.0000	0.0000	30004	30004	0	0
hg38.chrUn_KI270579v1	31033	hs1	0.9666	0.9989	0.0000	0.0000	29996	29962	0	0
hg38.chrUn_KI270581v1	7046	GCA_028858775.2	0.7566	0.9709	0.0000	0.0000	5331	5176	0	0
hg38.chrUn_KI270581v1	7046	GCA_029281585.2	0.7570	0.9841	0.0000	0.0000	5334	5249	0	0
hg38.chrUn_KI270581v1	7046	GCA_029289425.2	0.7566	0.9636	0.0000	0.0000	5331	5137	0	0
hg38.chrUn_KI270581v1	7046	hg38	1.0000	1.0000	0.0000	0.0000	7046	7046	0	0
hg38.chrUn_KI270581v1	7046	hs1	1.0000	0.9997	0.0000	0.0000	7046	7044	0	0
hg38.chrUn_KI270582v1	6504	GCA_028858775.2	0.9994	0.9878	0.0000	0.0000	6500	6421	0	0
hg38.chrUn_KI270582v1	6504	GCA_029281585.2	0.9968	0.9784	0.0000	0.0000	6483	6343	0	0
hg38.chrUn_KI270582v1	6504	GCA_029289425.2	0.9991	0.9857	0.0000	0.0000	6498	6405	0	0
hg38.chrUn_KI270582v1	6504	hg38	1.0000	1.0000	0.0000	0.0000	6504	6504	0	0
hg38.chrUn_KI270582v1	6504	hs1	0.9998	0.9992	0.0000	0.0000	6503	6498	0	0
hg38.chrUn_KI270583v1	1400	GCA_028858775.2	0.9936	0.9641	0.0000	0.0000	1391	1341	0	0
hg38.chrUn_KI270583v1	1400	GCA_029281585.2	0.9857	0.9681	0.0000	0.0000	1380	1336	0	0
hg38.chrUn_KI270583v1	1400	GCA_029289425.2	0.9929	0.9568	0.0000	0.0000	1390	1330	0	0
hg38.chrUn_KI270583v1	1400	hg38	0.9993	1.0000	0.0000	0.0000	1399	1399	0	0
hg38.chrUn_KI270583v1	1400	hs1	0.9993	0.9986	0.0000	0.0000	1399	1397	0	0
hg38.chrUn_KI270741v1	157432	GCA_028858775.2	0.5504	0.9163	0.0000	0.0000	86656	79402	0	0
hg38.chrUn_KI270741v1	157432	GCA_028878055.2	0.3352	0.9348	0.0000	0.0000	52772	49329	0	0
hg38.chrUn_KI270741v1	157432	GCA_028885625.2	0.4078	0.9321	0.0000	0.0000	64199	59838	0	0
hg38.chrUn_KI270741v1	157432	GCA_028885655.2	0.4078	0.9315	0.0000	0.0000	64195	59798	0	0
hg38.chrUn_KI270741v1	157432	GCA_029281585.2	0.6031	0.9461	0.0000	0.0000	94953	89834	0	0
hg38.chrUn_KI270741v1	157432	GCA_029289425.2	0.5567	0.9239	0.0000	0.0000	87638	80972	0	0
hg38.chrUn_KI270741v1	157432	hg38	0.9816	1.0000	0.0000	0.0000	154535	154535	0	0
hg38.chrUn_KI270741v1	157432	hs1	0.8711	0.9977	0.0000	0.0000	137134	136824	0	0
hg38.chrUn_KI270742v1	186739	GCA_028858775.2	0.9205	0.9849	0.0000	0.0000	171900	169303	0	0
hg38.chrUn_KI270742v1	186739	GCA_028878055.2	0.6267	0.9466	0.0000	0.0000	117023	110778	0	0
hg38.chrUn_KI270742v1	186739	GCA_028885625.2	0.6745	0.9578	0.0000	0.0000	125949	120632	0	0
hg38.chrUn_KI270742v1	186739	GCA_028885655.2	0.6729	0.9565	0.0000	0.0000	125662	120198	0	0
hg38.chrUn_KI270742v1	186739	GCA_029281585.2	0.8229	0.9745	0.0000	0.0000	153670	149745	0	0
hg38.chrUn_KI270742v1	186739	GCA_029289425.2	0.9201	0.9847	0.0000	0.0000	171818	169194	0	0
hg38.chrUn_KI270742v1	186739	hg38	1.0000	1.0000	0.0005	1.0000	186739	186739	85	85
hg38.chrUn_KI270742v1	186739	hs1	0.9981	0.9999	0.0000	1.0000	186389	186375	1	1
hg38.chrUn_KI270743v1	210658	GCA_028858775.2	0.7857	0.9831	0.0003	0.7571	165505	162716	70	53
hg38.chrUn_KI270743v1	210658	GCA_028878055.2	0.3890	0.9368	0.0000	0.0000	81941	76760	0	0
hg38.chrUn_KI270743v1	210658	GCA_028885625.2	0.4554	0.9538	0.0000	0.0000	95939	91508	0	0
hg38.chrUn_KI270743v1	210658	GCA_028885655.2	0.4547	0.9527	0.0000	0.0000	95783	91250	0	0
hg38.chrUn_KI270743v1	210658	GCA_029281585.2	0.5880	0.9680	0.0000	0.0000	123860	119897	0	0
hg38.chrUn_KI270743v1	210658	GCA_029289425.2	0.7850	0.9828	0.0003	0.7571	165376	162538	70	53
hg38.chrUn_KI270743v1	210658	hg38	1.0000	1.0000	0.1204	1.0000	210652	210652	25357	25357
hg38.chrUn_KI270743v1	210658	hs1	0.9913	0.9996	0.0966	0.9976	208825	208732	20348	20299
hg38.chrUn_KI270744v1	168472	GCA_028858775.2	0.7007	0.9829	0.0000	0.0000	118051	116027	0	0
hg38.chrUn_KI270744v1	168472	GCA_028878055.2	0.5805	0.9427	0.0000	0.0000	97790	92188	0	0
hg38.chrUn_KI270744v1	168472	GCA_028885625.2	0.6475	0.9596	0.0000	0.0000	109079	104668	0	0
hg38.chrUn_KI270744v1	168472	GCA_028885655.2	0.6438	0.9587	0.0000	0.0000	108464	103982	0	0
hg38.chrUn_KI270744v1	168472	GCA_029281585.2	0.6737	0.9685	0.0000	0.0000	113499	109926	0	0
hg38.chrUn_KI270744v1	168472	GCA_029289425.2	0.7341	0.9795	0.0334	0.9566	123675	121144	5620	5376
hg38.chrUn_KI270744v1	168472	hg38	1.0000	1.0000	0.1227	1.0000	168472	168472	20668	20668
hg38.chrUn_KI270744v1	168472	hs1	0.8204	0.9923	0.0000	0.0000	138207	137144	0	0
hg38.chrUn_KI270745v1	41891	GCA_028858775.2	0.7244	0.9775	0.0000	0.0000	30347	29665	0	0
hg38.chrUn_KI270745v1	41891	GCA_028878055.2	0.3348	0.9172	0.0000	0.0000	14025	12864	0	0
hg38.chrUn_KI270745v1	41891	GCA_028885625.2	0.3591	0.9341	0.0000	0.0000	15045	14053	0	0
hg38.chrUn_KI270745v1	41891	GCA_028885655.2	0.3588	0.9345	0.0000	0.0000	15029	14045	0	0
hg38.chrUn_KI270745v1	41891	GCA_029281585.2	0.4786	0.9637	0.0000	0.0000	20050	19323	0	0
hg38.chrUn_KI270745v1	41891	GCA_029289425.2	0.7273	0.9803	0.0000	0.0000	30468	29869	0	0
hg38.chrUn_KI270745v1	41891	hg38	1.0000	1.0000	0.0000	0.0000	41891	41891	0	0
hg38.chrUn_KI270745v1	41891	hs1	0.9758	0.9997	0.0000	0.0000	40879	40865	0	0
hg38.chrUn_KI270746v1	66486	GCA_028858775.2	0.8102	0.9647	0.0002	0.7500	53866	51962	12	9
hg38.chrUn_KI270746v1	66486	GCA_028878055.2	0.7049	0.9596	0.0000	0.0000	46864	44973	0	0
hg38.chrUn_KI270746v1	66486	GCA_028885625.2	0.7156	0.9668	0.0000	0.6667	47576	45997	3	2
hg38.chrUn_KI270746v1	66486	GCA_028885655.2	0.7156	0.9669	0.0000	0.6667	47579	46005	3	2
hg38.chrUn_KI270746v1	66486	GCA_029281585.2	0.7633	0.9775	0.0002	0.7273	50748	49605	11	8
hg38.chrUn_KI270746v1	66486	GCA_029289425.2	0.8100	0.9630	0.0002	0.7500	53856	51866	12	9
hg38.chrUn_KI270746v1	66486	hg38	1.0000	1.0000	0.0260	1.0000	66486	66486	1728	1728
hg38.chrUn_KI270746v1	66486	hs1	0.9936	0.9981	0.0224	0.9946	66059	65931	1487	1479
hg38.chrUn_KI270747v1	198735	GCA_028858775.2	0.5436	0.9053	0.1623	0.8348	108037	97803	32264	26934
hg38.chrUn_KI270747v1	198735	GCA_028878055.2	0.0118	0.9345	0.0000	0.0000	2336	2183	0	0
hg38.chrUn_KI270747v1	198735	GCA_028885625.2	0.0261	0.9503	0.0000	0.0000	5195	4937	0	0
hg38.chrUn_KI270747v1	198735	GCA_028885655.2	0.0261	0.9474	0.0000	0.0000	5194	4921	0	0
hg38.chrUn_KI270747v1	198735	GCA_029281585.2	0.3950	0.9040	0.0193	0.7624	78498	70962	3842	2929
hg38.chrUn_KI270747v1	198735	GCA_029289425.2	0.5445	0.9013	0.1624	0.8294	108207	97527	32274	26769
hg38.chrUn_KI270747v1	198735	hg38	1.0000	1.0000	0.3978	1.0000	198735	198735	79062	79062
hg38.chrUn_KI270747v1	198735	hs1	0.7847	0.9657	0.2442	0.9314	155945	150596	48530	45200
hg38.chrUn_KI270748v1	93321	GCA_028858775.2	0.8402	0.9849	0.0049	0.9339	78405	77223	454	424
hg38.chrUn_KI270748v1	93321	GCA_028878055.2	0.6323	0.9521	0.0020	0.8877	59009	56184	187	166
hg38.chrUn_KI270748v1	93321	GCA_028885625.2	0.6920	0.9521	0.0031	0.8055	64582	61490	293	236
hg38.chrUn_KI270748v1	93321	GCA_028885655.2	0.6727	0.9516	0.0032	0.7925	62777	59737	294	233
hg38.chrUn_KI270748v1	93321	GCA_029281585.2	0.7764	0.9782	0.0038	0.9382	72457	70875	356	334
hg38.chrUn_KI270748v1	93321	GCA_029289425.2	0.8656	0.9833	0.0224	0.9278	80777	79426	2092	1941
hg38.chrUn_KI270748v1	93321	hg38	1.0000	1.0000	0.0641	1.0000	93321	93321	5981	5981
hg38.chrUn_KI270748v1	93321	hs1	0.9276	0.9991	0.0191	0.9804	86561	86485	1783	1748
hg38.chrUn_KI270749v1	158759	GCA_028858775.2	0.8680	0.9819	0.0000	0.0000	137810	135311	1	0
hg38.chrUn_KI270749v1	158759	GCA_028878055.2	0.5550	0.9598	0.0000	0.0000	88118	84577	0	0
hg38.chrUn_KI270749v1	158759	GCA_028885625.2	0.6695	0.9676	0.0000	0.0000	106285	102843	0	0
hg38.chrUn_KI270749v1	158759	GCA_028885655.2	0.6547	0.9678	0.0000	0.0000	103935	100585	0	0
hg38.chrUn_KI270749v1	158759	GCA_029281585.2	0.8330	0.9867	0.0000	0.0000	132244	130480	0	0
hg38.chrUn_KI270749v1	158759	GCA_029289425.2	0.8680	0.9813	0.0000	1.0000	137806	135225	1	1
hg38.chrUn_KI270749v1	158759	hg38	1.0000	1.0000	0.0004	1.0000	158759	158759	71	71
hg38.chrUn_KI270749v1	158759	hs1	0.9974	0.9994	0.0004	0.8689	158353	158255	61	53
hg38.chrUn_KI270750v1	148850	GCA_028858775.2	0.7911	0.9782	0.0000	0.0000	117753	115188	0	0
hg38.chrUn_KI270750v1	148850	GCA_028878055.2	0.5563	0.9411	0.0000	0.0000	82799	77924	1	0
hg38.chrUn_KI270750v1	148850	GCA_028885625.2	0.6872	0.9609	0.0000	0.0000	102283	98283	1	0
hg38.chrUn_KI270750v1	148850	GCA_028885655.2	0.6910	0.9584	0.0000	0.0000	102850	98571	1	0
hg38.chrUn_KI270750v1	148850	GCA_029281585.2	0.7778	0.9833	0.0000	0.0000	115770	113834	1	0
hg38.chrUn_KI270750v1	148850	GCA_029289425.2	0.7917	0.9778	0.0000	0.0000	117845	115227	0	0
hg38.chrUn_KI270750v1	148850	hg38	0.8853	1.0000	0.0002	1.0000	131782	131782	32	32
hg38.chrUn_KI270750v1	148850	hs1	0.8236	0.9988	0.0002	1.0000	122597	122450	31	31
hg38.chrUn_KI270751v1	150742	GCA_028858775.2	0.8905	0.9844	0.0000	0.0000	134232	132135	0	0
hg38.chrUn_KI270751v1	150742	GCA_028878055.2	0.6288	0.9452	0.0000	0.0000	94793	89596	0	0
hg38.chrUn_KI270751v1	150742	GCA_028885625.2	0.6913	0.9579	0.0000	0.0000	104215	99831	0	0
hg38.chrUn_KI270751v1	150742	GCA_028885655.2	0.6901	0.9567	0.0000	0.0000	104034	99533	0	0
hg38.chrUn_KI270751v1	150742	GCA_029281585.2	0.7808	0.9773	0.0000	0.0000	117697	115026	0	0
hg38.chrUn_KI270751v1	150742	GCA_029289425.2	0.8905	0.9841	0.0000	0.0000	134238	132098	0	0
hg38.chrUn_KI270751v1	150742	hg38	1.0000	1.0000	0.0013	1.0000	150742	150742	203	203
hg38.chrUn_KI270751v1	150742	hs1	0.9955	0.9993	0.0000	1.0000	150062	149961	1	1
hg38.chrUn_KI270752v1	27745	GCA_028858775.2	0.3304	0.7034	0.0000	0.0000	9166	6447	0	0
hg38.chrUn_KI270752v1	27745	GCA_028878055.2	0.3252	0.6961	0.0000	0.0000	9023	6281	0	0
hg38.chrUn_KI270752v1	27745	GCA_028885625.2	0.3278	0.7001	0.0000	0.0000	9095	6367	0	0
hg38.chrUn_KI270752v1	27745	GCA_028885655.2	0.3274	0.6993	0.0000	0.0000	9083	6352	0	0
hg38.chrUn_KI270752v1	27745	GCA_029281585.2	0.3298	0.7042	0.0000	0.0000	9149	6443	0	0
hg38.chrUn_KI270752v1	27745	GCA_029289425.2	0.3305	0.7029	0.0000	0.0000	9171	6446	0	0
hg38.chrUn_KI270752v1	27745	hg38	1.0000	1.0000	0.0000	0.0000	27745	27745	0	0
hg38.chrUn_KI270752v1	27745	hs1	0.3315	0.7056	0.0000	0.0000	9198	6490	0	0
hg38.chrUn_KI270753v1	62944	GCA_028858775.2	0.9259	0.9893	0.0029	0.9505	58280	57655	182	173
hg38.chrUn_KI270753v1	62944	GCA_028878055.2	0.6708	0.9416	0.0000	0.0000	42225	39758	0	0
hg38.chrUn_KI270753v1	62944	GCA_028885625.2	0.8375	0.9522	0.0000	0.0000	52715	50197	0	0
hg38.chrUn_KI270753v1	62944	GCA_028885655.2	0.8373	0.9522	0.0000	0.0000	52706	50188	0	0
hg38.chrUn_KI270753v1	62944	GCA_029281585.2	0.9120	0.9888	0.0003	0.9474	57402	56760	19	18
hg38.chrUn_KI270753v1	62944	GCA_029289425.2	0.9221	0.9868	0.0045	0.9359	58039	57273	281	263
hg38.chrUn_KI270753v1	62944	hg38	1.0000	1.0000	0.0046	1.0000	62943	62943	287	287
hg38.chrUn_KI270753v1	62944	hs1	0.9863	0.9996	0.0001	1.0000	62084	62061	6	6
hg38.chrUn_KI270754v1	40191	GCA_028858775.2	0.3906	0.9799	0.0000	0.0000	15698	15382	0	0
hg38.chrUn_KI270754v1	40191	GCA_028878055.2	0.2939	0.9451	0.0000	0.0000	11813	11165	0	0
hg38.chrUn_KI270754v1	40191	GCA_028885625.2	0.2574	0.9557	0.0000	0.0000	10346	9888	0	0
hg38.chrUn_KI270754v1	40191	GCA_028885655.2	0.2563	0.9553	0.0000	0.0000	10302	9842	0	0
hg38.chrUn_KI270754v1	40191	GCA_029281585.2	0.3402	0.9855	0.0000	0.0000	13674	13476	0	0
hg38.chrUn_KI270754v1	40191	GCA_029289425.2	0.3980	0.9801	0.0000	0.0000	15997	15679	0	0
hg38.chrUn_KI270754v1	40191	hg38	1.0000	1.0000	0.1123	1.0000	40191	40191	4514	4514
hg38.chrUn_KI270754v1	40191	hs1	0.9097	0.9794	0.0322	0.9529	36563	35810	1294	1233
hg38.chrUn_KI270755v1	36723	GCA_028858775.2	0.7821	0.9834	0.0000	0.0000	28720	28242	0	0
hg38.chrUn_KI270755v1	36723	GCA_028878055.2	0.6786	0.9394	0.0000	0.0000	24919	23408	0	0
hg38.chrUn_KI270755v1	36723	GCA_028885625.2	0.7057	0.9519	0.0000	0.0000	25914	24667	0	0
hg38.chrUn_KI270755v1	36723	GCA_028885655.2	0.6965	0.9518	0.0000	0.0000	25579	24347	0	0
hg38.chrUn_KI270755v1	36723	GCA_029281585.2	0.7888	0.9824	0.0000	0.0000	28967	28456	0	0
hg38.chrUn_KI270755v1	36723	GCA_029289425.2	0.7786	0.9825	0.0000	0.0000	28592	28093	0	0
hg38.chrUn_KI270755v1	36723	hg38	1.0000	1.0000	0.0000	0.0000	36723	36723	0	0
hg38.chrUn_KI270755v1	36723	hs1	0.9217	0.9947	0.0000	0.0000	33847	33666	0	0
hg38.chrX	156040895	GCA_028858775.2	0.9433	0.9890	0.8537	0.9894	147192944	145573381	133219839	131812496
hg38.chrX	156040895	GCA_028878055.2	0.8319	0.9659	0.7475	0.9671	129815463	125383356	116632965	112792479
hg38.chrX	156040895	GCA_028885625.2	0.8961	0.9709	0.8058	0.9715	139830293	135761273	125737276	122151742
hg38.chrX	156040895	GCA_028885655.2	0.8971	0.9709	0.8071	0.9715	139989304	135916597	125939747	122348520
hg38.chrX	156040895	GCA_029281585.2	0.9347	0.9847	0.8455	0.9851	145847726	143610146	131925118	129957866
hg38.chrX	156040895	GCA_029289425.2	0.9434	0.9890	0.8533	0.9895	147212445	145595120	133154248	131750547
hg38.chrX	156040895	hg38	0.9776	1.0000	0.8900	1.0000	152547089	152547089	138873944	138873944
hg38.chrX	156040895	hs1	0.9663	0.9990	0.8789	0.9990	150779754	150623465	137138283	137006151
hg38.chrX_KI270880v1_alt	284869	GCA_028858775.2	0.8535	0.9658	0.0001	1.0000	243141	234837	21	21
hg38.chrX_KI270880v1_alt	284869	GCA_028878055.2	0.4827	0.9081	0.0000	0.0000	137495	124857	0	0
hg38.chrX_KI270880v1_alt	284869	GCA_028885625.2	0.5286	0.9189	0.0000	0.0000	150575	138363	0	0
hg38.chrX_KI270880v1_alt	284869	GCA_028885655.2	0.5450	0.9228	0.0000	0.0000	155245	143266	0	0
hg38.chrX_KI270880v1_alt	284869	GCA_029281585.2	0.7423	0.9625	0.0000	0.0000	211463	203536	0	0
hg38.chrX_KI270880v1_alt	284869	GCA_029289425.2	0.8423	0.9645	0.0001	1.0000	239950	231428	21	21
hg38.chrX_KI270880v1_alt	284869	hg38	0.9998	1.0000	0.0088	1.0000	284812	284812	2498	2498
hg38.chrX_KI270880v1_alt	284869	hs1	0.9815	0.9981	0.0085	0.9830	279586	279045	2418	2377
hg38.chrX_KI270881v1_alt	144206	GCA_028858775.2	0.7579	0.9856	0.0051	0.9823	109294	107722	736	723
hg38.chrX_KI270881v1_alt	144206	GCA_028878055.2	0.6482	0.9633	0.0000	0.0000	93468	90040	0	0
hg38.chrX_KI270881v1_alt	144206	GCA_028885625.2	0.8327	0.9563	0.0049	0.7013	120074	114832	713	500
hg38.chrX_KI270881v1_alt	144206	GCA_028885655.2	0.8327	0.9565	0.0049	0.7027	120076	114849	713	501
hg38.chrX_KI270881v1_alt	144206	GCA_029281585.2	0.8591	0.9827	0.0051	0.9783	123889	121747	736	720
hg38.chrX_KI270881v1_alt	144206	GCA_029289425.2	0.7578	0.9854	0.0051	0.9823	109281	107688	736	723
hg38.chrX_KI270881v1_alt	144206	hg38	1.0000	1.0000	0.0051	1.0000	144206	144206	736	736
hg38.chrX_KI270881v1_alt	144206	hs1	0.8670	0.9985	0.0000	0.0000	125022	124829	0	0
hg38.chrX_KI270913v1_alt	274009	GCA_028858775.2	0.8698	0.9666	0.0001	0.9756	238333	230367	41	40
hg38.chrX_KI270913v1_alt	274009	GCA_028878055.2	0.4918	0.9095	0.0000	0.0000	134746	122550	0	0
hg38.chrX_KI270913v1_alt	274009	GCA_028885625.2	0.5385	0.9201	0.0000	0.0000	147556	135766	0	0
hg38.chrX_KI270913v1_alt	274009	GCA_028885655.2	0.5564	0.9238	0.0000	0.0000	152458	140838	0	0
hg38.chrX_KI270913v1_alt	274009	GCA_029281585.2	0.7492	0.9628	0.0000	0.0000	205282	197650	0	0
hg38.chrX_KI270913v1_alt	274009	GCA_029289425.2	0.8599	0.9651	0.0001	0.9512	235626	227410	41	39
hg38.chrX_KI270913v1_alt	274009	hg38	1.0000	1.0000	0.0002	1.0000	274009	274009	64	64
hg38.chrX_KI270913v1_alt	274009	hs1	0.9965	0.9982	0.0002	1.0000	273040	272562	64	64
hg38.chrY	57227415	GCA_028858775.2	0.3765	0.9721	0.0873	0.9687	21546828	20945910	4998343	4841855
hg38.chrY	57227415	GCA_028878055.2	0.2350	0.9278	0.0427	0.9357	13449623	12478509	2442678	2285665
hg38.chrY	57227415	GCA_028885625.2	0.2992	0.9400	0.0666	0.9358	17119910	16092460	3809809	3565338
hg38.chrY	57227415	GCA_028885655.2	0.2989	0.9403	0.0667	0.9358	17102633	16081422	3815746	3570599
hg38.chrY	57227415	GCA_029281585.2	0.3481	0.9667	0.0725	0.9733	19922042	19257907	4151243	4040474
hg38.chrY	57227415	GCA_029289425.2	0.3782	0.9727	0.0905	0.9667	21644851	21054300	5179307	5006598
hg38.chrY	57227415	hg38	0.4548	1.0000	0.1408	1.0000	26029487	26029487	8057575	8057575
hg38.chrY	57227415	hs1	0.4455	0.9977	0.1334	0.9946	25493873	25435108	7631442	7590040
hg38.chrY_KI270740v1_random	37240	GCA_028858775.2	0.0276	0.9639	0.0000	0.0000	1026	989	0	0
hg38.chrY_KI270740v1_random	37240	GCA_028885625.2	0.0269	0.8991	0.0000	0.0000	1001	900	0	0
hg38.chrY_KI270740v1_random	37240	GCA_028885655.2	0.0269	0.9022	0.0000	0.0000	1002	904	0	0
hg38.chrY_KI270740v1_random	37240	GCA_029281585.2	0.0275	0.9580	0.0000	0.0000	1025	982	0	0
hg38.chrY_KI270740v1_random	37240	GCA_029289425.2	0.0275	0.9668	0.0000	0.0000	1024	990	0	0
hg38.chrY_KI270740v1_random	37240	hg38	1.0000	1.0000	0.7701	1.0000	37240	37240	28677	28677
hg38.chrY_KI270740v1_random	37240	hs1	0.9368	0.9156	0.7673	0.9029	34887	31943	28576	25802