contig	len	genome	aln	ident	1:1-aln	1:1-ident	aln-bp	ident-bp	1:1-aln-bp	1:1-ident-bp
GCA_028858775.2.CM054434.2	231299448	GCA_028858775.2	0.9785	1.0000	0.9260	1.0000	226334188	226334188	214182138	214182138
GCA_028858775.2.CM054434.2	231299448	GCA_028878055.2	0.8826	0.9617	0.8323	0.9621	204138704	196315596	192502854	185201473
GCA_028858775.2.CM054434.2	231299448	GCA_028885625.2	0.9296	0.9675	0.8792	0.9676	215018265	208021292	203355123	196767418
GCA_028858775.2.CM054434.2	231299448	GCA_028885655.2	0.9302	0.9675	0.8800	0.9676	215159831	208162335	203536960	196945352
GCA_028858775.2.CM054434.2	231299448	GCA_029281585.2	0.9502	0.9838	0.8929	0.9838	219788089	216225014	206528091	203176044
GCA_028858775.2.CM054434.2	231299448	GCA_029289425.2	0.9693	0.9958	0.9153	0.9958	224198270	223253914	211708433	210828156
GCA_028858775.2.CM054434.2	231299448	hg38	0.9559	0.9875	0.8917	0.9876	221092273	218333600	206260063	203710869
GCA_028858775.2.CM054434.2	231299448	hs1	0.9565	0.9875	0.9008	0.9876	221233752	218465004	208346079	205767793
GCA_028858775.2.CM054437.2	191670129	GCA_028858775.2	0.9807	1.0000	0.9574	1.0000	187962152	187962152	183509081	183509081
GCA_028858775.2.CM054437.2	191670129	GCA_028878055.2	0.8815	0.9604	0.8534	0.9607	168959551	162264301	163573571	157140080
GCA_028858775.2.CM054437.2	191670129	GCA_028885625.2	0.9282	0.9661	0.8971	0.9661	177900131	171866620	171949715	166122708
GCA_028858775.2.CM054437.2	191670129	GCA_028885655.2	0.9286	0.9661	0.8983	0.9661	177990964	171956707	172171066	166336400
GCA_028858775.2.CM054437.2	191670129	GCA_029281585.2	0.9529	0.9827	0.9251	0.9828	182638429	179482362	177313372	174257093
GCA_028858775.2.CM054437.2	191670129	GCA_029289425.2	0.9717	0.9952	0.9467	0.9953	186243429	185350482	181449493	180588256
GCA_028858775.2.CM054437.2	191670129	hg38	0.9573	0.9864	0.9237	0.9864	183482431	180991539	177048164	174649049
GCA_028858775.2.CM054437.2	191670129	hs1	0.9578	0.9864	0.9341	0.9864	183574484	181079122	179047256	176614913
GCA_028858775.2.CM054438.2	178964043	GCA_028858775.2	0.9899	1.0000	0.9629	1.0000	177153260	177153260	172328471	172328471
GCA_028858775.2.CM054438.2	178964043	GCA_028878055.2	0.8968	0.9608	0.8663	0.9611	160493053	154199905	155031896	149001257
GCA_028858775.2.CM054438.2	178964043	GCA_028885625.2	0.9386	0.9667	0.9100	0.9668	167968856	162372672	162859374	157459172
GCA_028858775.2.CM054438.2	178964043	GCA_028885655.2	0.9399	0.9667	0.9104	0.9669	168207437	162606960	162931729	157531897
GCA_028858775.2.CM054438.2	178964043	GCA_029281585.2	0.9615	0.9831	0.9302	0.9831	172073356	169166788	166477034	163663975
GCA_028858775.2.CM054438.2	178964043	GCA_029289425.2	0.9813	0.9956	0.9530	0.9956	175625429	174844308	170558513	169815641
GCA_028858775.2.CM054438.2	178964043	hg38	0.9694	0.9867	0.9305	0.9867	173493273	171186261	166522662	164316071
GCA_028858775.2.CM054438.2	178964043	hs1	0.9697	0.9867	0.9413	0.9867	173543238	171232174	168467349	166228250
GCA_028858775.2.CM054439.2	183320697	GCA_028858775.2	0.9937	1.0000	0.9028	1.0000	182159678	182159678	165507177	165507177
GCA_028858775.2.CM054439.2	183320697	GCA_028878055.2	0.8752	0.9613	0.8049	0.9616	160448392	154232716	147556035	141895831
GCA_028858775.2.CM054439.2	183320697	GCA_028885625.2	0.9133	0.9670	0.8448	0.9672	167418992	161892496	154867237	149780394
GCA_028858775.2.CM054439.2	183320697	GCA_028885655.2	0.9137	0.9670	0.8443	0.9672	167501942	161977371	154774416	149694082
GCA_028858775.2.CM054439.2	183320697	GCA_029281585.2	0.9404	0.9834	0.8667	0.9833	172401933	169540846	158890444	156230315
GCA_028858775.2.CM054439.2	183320697	GCA_029289425.2	0.9780	0.9932	0.8877	0.9946	179291398	178067530	162727569	161844805
GCA_028858775.2.CM054439.2	183320697	hg38	0.9437	0.9869	0.8402	0.9870	172998401	170735422	154021090	152015682
GCA_028858775.2.CM054439.2	183320697	hs1	0.9440	0.9868	0.8717	0.9869	173048194	170758002	159809409	157712843
GCA_028858775.2.CM054440.2	174648847	GCA_028858775.2	0.9893	1.0000	0.8542	1.0000	172774223	172774223	149177335	149177335
GCA_028858775.2.CM054440.2	174648847	GCA_028878055.2	0.8262	0.9595	0.7462	0.9607	144298358	138455971	130330720	125203886
GCA_028858775.2.CM054440.2	174648847	GCA_028885625.2	0.8515	0.9658	0.7650	0.9661	148708772	143623808	133610396	129081128
GCA_028858775.2.CM054440.2	174648847	GCA_028885655.2	0.8517	0.9658	0.7653	0.9661	148741449	143657185	133655035	129125414
GCA_028858775.2.CM054440.2	174648847	GCA_029281585.2	0.8784	0.9827	0.7871	0.9828	153407104	150760269	137465641	135099596
GCA_028858775.2.CM054440.2	174648847	GCA_029289425.2	0.9499	0.9895	0.8336	0.9916	165905716	164161974	145591151	144364638
GCA_028858775.2.CM054440.2	174648847	hg38	0.8851	0.9865	0.7872	0.9866	154583231	152497037	137489546	135651241
GCA_028858775.2.CM054440.2	174648847	hs1	0.8855	0.9865	0.7959	0.9866	154653609	152565840	138995880	137132493
GCA_028858775.2.CM054441.2	155691389	GCA_028858775.2	0.9752	1.0000	0.9020	1.0000	151826630	151826630	140430775	140430775
GCA_028858775.2.CM054441.2	155691389	GCA_028878055.2	0.8374	0.9584	0.8066	0.9591	130372543	124950572	125586187	120443935
GCA_028858775.2.CM054441.2	155691389	GCA_028885625.2	0.8724	0.9649	0.8389	0.9652	135827199	131060363	130610138	126059289
GCA_028858775.2.CM054441.2	155691389	GCA_028885655.2	0.8726	0.9649	0.8391	0.9652	135856747	131090984	130648079	126096036
GCA_028858775.2.CM054441.2	155691389	GCA_029281585.2	0.8959	0.9819	0.8622	0.9821	139481626	136950416	134239640	131830818
GCA_028858775.2.CM054441.2	155691389	GCA_029289425.2	0.9463	0.9925	0.8831	0.9950	147330973	146230512	137490681	136800576
GCA_028858775.2.CM054441.2	155691389	hg38	0.9016	0.9856	0.8464	0.9859	140370823	138347285	131778327	129925343
GCA_028858775.2.CM054441.2	155691389	hs1	0.9019	0.9856	0.8688	0.9858	140422848	138396402	135268381	133344193
GCA_028858775.2.CM054442.2	146288486	GCA_028858775.2	0.9838	1.0000	0.8708	1.0000	143922428	143922428	127391793	127391793
GCA_028858775.2.CM054442.2	146288486	GCA_028878055.2	0.8203	0.9599	0.7701	0.9602	120002379	115185751	112663484	108183567
GCA_028858775.2.CM054442.2	146288486	GCA_028885625.2	0.8509	0.9655	0.7958	0.9654	124479525	120179397	116418847	112394907
GCA_028858775.2.CM054442.2	146288486	GCA_028885655.2	0.8514	0.9655	0.7967	0.9654	124554870	120257556	116553868	112525037
GCA_028858775.2.CM054442.2	146288486	GCA_029281585.2	0.8754	0.9822	0.8235	0.9821	128058218	125778556	120467948	118317154
GCA_028858775.2.CM054442.2	146288486	GCA_029289425.2	0.9425	0.9900	0.8531	0.9933	137882017	136503764	124802081	123970762
GCA_028858775.2.CM054442.2	146288486	hg38	0.8819	0.9858	0.8257	0.9859	129012990	127185142	120790224	119083343
GCA_028858775.2.CM054442.2	146288486	hs1	0.8822	0.9858	0.8289	0.9858	129059771	127225081	121257244	119537476
GCA_028858775.2.CM054443.2	136991367	GCA_028858775.2	0.9880	1.0000	0.9352	1.0000	135353844	135353844	128110514	128110514
GCA_028858775.2.CM054443.2	136991367	GCA_028878055.2	0.8575	0.9605	0.8218	0.9609	117473480	112836033	112577739	108178511
GCA_028858775.2.CM054443.2	136991367	GCA_028885625.2	0.8848	0.9665	0.8469	0.9666	121216524	117150012	116016761	112146956
GCA_028858775.2.CM054443.2	136991367	GCA_028885655.2	0.8844	0.9665	0.8458	0.9667	121151339	117088919	115867868	112006072
GCA_028858775.2.CM054443.2	136991367	GCA_029281585.2	0.9242	0.9827	0.8841	0.9828	126601922	124413826	121110340	119029946
GCA_028858775.2.CM054443.2	136991367	GCA_029289425.2	0.9695	0.9931	0.9199	0.9943	132819688	131898233	126022795	125308675
GCA_028858775.2.CM054443.2	136991367	hg38	0.9314	0.9866	0.8795	0.9867	127598433	125885538	120487518	118890497
GCA_028858775.2.CM054443.2	136991367	hs1	0.9321	0.9866	0.8935	0.9867	127683920	125968959	122406440	120777178
GCA_028858775.2.CM054444.2	140160335	GCA_028858775.2	0.9966	1.0000	0.9458	1.0000	139678841	139678841	132558074	132558074
GCA_028858775.2.CM054444.2	140160335	GCA_028878055.2	0.8477	0.9609	0.8192	0.9615	118807770	114158957	114819198	110401792
GCA_028858775.2.CM054444.2	140160335	GCA_028885625.2	0.8876	0.9666	0.8608	0.9668	124403729	120245980	120648304	116644772
GCA_028858775.2.CM054444.2	140160335	GCA_028885655.2	0.8874	0.9666	0.8606	0.9668	124371472	120215674	120615486	116614607
GCA_028858775.2.CM054444.2	140160335	GCA_029281585.2	0.9097	0.9832	0.8835	0.9833	127502425	125356484	123838345	121772777
GCA_028858775.2.CM054444.2	140160335	GCA_029289425.2	0.9673	0.9923	0.9143	0.9944	135574903	134528650	128154715	127435415
GCA_028858775.2.CM054444.2	140160335	hg38	0.9163	0.9869	0.8798	0.9869	128425920	126739120	123308435	121693200
GCA_028858775.2.CM054444.2	140160335	hs1	0.9165	0.9869	0.8914	0.9869	128455995	126767120	124939414	123302873
GCA_028858775.2.CM054445.2	118863153	GCA_028858775.2	0.9977	1.0000	0.9218	1.0000	118594079	118594079	109571199	109571199
GCA_028858775.2.CM054445.2	118863153	GCA_028878055.2	0.8691	0.9601	0.8170	0.9605	103300152	99181182	97107332	93267249
GCA_028858775.2.CM054445.2	118863153	GCA_028885625.2	0.8990	0.9675	0.8443	0.9675	106852676	103375862	100358060	97097656
GCA_028858775.2.CM054445.2	118863153	GCA_028885655.2	0.8991	0.9674	0.8446	0.9675	106864888	103386311	100395340	97134819
GCA_028858775.2.CM054445.2	118863153	GCA_029281585.2	0.9208	0.9826	0.8591	0.9827	109447632	107540506	102112024	100348027
GCA_028858775.2.CM054445.2	118863153	GCA_029289425.2	0.9717	0.9915	0.9047	0.9925	115501992	114521042	107533254	106725627
GCA_028858775.2.CM054445.2	118863153	hg38	0.9277	0.9864	0.8646	0.9863	110270766	108766584	102772315	101365763
GCA_028858775.2.CM054445.2	118863153	hs1	0.9292	0.9862	0.8727	0.9862	110450381	108927352	103735035	102304650
GCA_028858775.2.CM054446.2	122853238	GCA_028858775.2	0.9657	1.0000	0.8616	1.0000	118635362	118635362	105856021	105856021
GCA_028858775.2.CM054446.2	122853238	GCA_028878055.2	0.8109	0.9605	0.7664	0.9608	99616418	95682630	94155464	90461489
GCA_028858775.2.CM054446.2	122853238	GCA_028885625.2	0.8412	0.9664	0.7917	0.9665	103349079	99878207	97260428	94004717
GCA_028858775.2.CM054446.2	122853238	GCA_028885655.2	0.8409	0.9664	0.7927	0.9665	103301502	99831713	97388175	94127812
GCA_028858775.2.CM054446.2	122853238	GCA_029281585.2	0.8613	0.9828	0.8106	0.9829	105810577	103992795	99580482	97878409
GCA_028858775.2.CM054446.2	122853238	GCA_029289425.2	0.9225	0.9905	0.8447	0.9936	113329676	112252642	103777246	103109840
GCA_028858775.2.CM054446.2	122853238	hg38	0.8665	0.9866	0.8071	0.9867	106451804	105023700	99153528	97830462
GCA_028858775.2.CM054446.2	122853238	hs1	0.8657	0.9865	0.8113	0.9866	106359230	104926367	99673380	98336510
GCA_028858775.2.CM054447.2	144476839	GCA_028858775.2	0.9911	1.0000	0.8766	1.0000	143196152	143196152	126644220	126644220
GCA_028858775.2.CM054447.2	144476839	GCA_028878055.2	0.8335	0.9617	0.8090	0.9620	120419308	115808166	116882224	112435329
GCA_028858775.2.CM054447.2	144476839	GCA_028885625.2	0.8585	0.9673	0.8332	0.9673	124034420	119981817	120374817	116444274
GCA_028858775.2.CM054447.2	144476839	GCA_028885655.2	0.8585	0.9673	0.8329	0.9674	124028501	119976216	120337899	116409266
GCA_028858775.2.CM054447.2	144476839	GCA_029281585.2	0.8755	0.9835	0.8499	0.9836	126489661	124403960	122794618	120776972
GCA_028858775.2.CM054447.2	144476839	GCA_029289425.2	0.9433	0.9899	0.8651	0.9953	136279763	134902889	124982792	124399103
GCA_028858775.2.CM054447.2	144476839	hg38	0.8800	0.9872	0.8507	0.9873	127145241	125522848	122911673	121353773
GCA_028858775.2.CM054447.2	144476839	hs1	0.8801	0.9872	0.8545	0.9873	127155643	125534275	123453133	121885721
GCA_028858775.2.CM054448.2	120149342	GCA_028858775.2	0.9736	1.0000	0.8063	1.0000	116972050	116972050	96873075	96873075
GCA_028858775.2.CM054448.2	120149342	GCA_028878055.2	0.7527	0.9603	0.7005	0.9610	90436611	86846744	84160142	80878027
GCA_028858775.2.CM054448.2	120149342	GCA_028885625.2	0.7852	0.9661	0.7297	0.9664	94335858	91139041	87671736	84728724
GCA_028858775.2.CM054448.2	120149342	GCA_028885655.2	0.7848	0.9661	0.7295	0.9664	94288089	91087829	87643692	84701046
GCA_028858775.2.CM054448.2	120149342	GCA_029281585.2	0.8073	0.9828	0.7432	0.9831	97001431	95335920	89300312	87787979
GCA_028858775.2.CM054448.2	120149342	GCA_029289425.2	0.9060	0.9864	0.7831	0.9927	108855791	107377323	94085489	93401911
GCA_028858775.2.CM054448.2	120149342	hg38	0.8107	0.9866	0.7517	0.9868	97409125	96101698	90320875	89126423
GCA_028858775.2.CM054448.2	120149342	hs1	0.8133	0.9865	0.7594	0.9867	97721961	96398908	91245790	90034374
GCA_028858775.2.CM054449.2	104701121	GCA_028858775.2	0.9483	1.0000	0.8207	1.0000	99291595	99291595	85930899	85930899
GCA_028858775.2.CM054449.2	104701121	GCA_028878055.2	0.7680	0.9610	0.7314	0.9615	80407802	77268169	76580400	73631420
GCA_028858775.2.CM054449.2	104701121	GCA_028885625.2	0.8121	0.9668	0.7704	0.9672	85024397	82202123	80665372	78016574
GCA_028858775.2.CM054449.2	104701121	GCA_028885655.2	0.8117	0.9668	0.7699	0.9672	84985388	82165297	80610851	77965151
GCA_028858775.2.CM054449.2	104701121	GCA_029281585.2	0.8279	0.9831	0.7801	0.9835	86682117	85219780	81673226	80326086
GCA_028858775.2.CM054449.2	104701121	GCA_029289425.2	0.8873	0.9915	0.8101	0.9942	92896310	92106559	84818048	84328579
GCA_028858775.2.CM054449.2	104701121	hg38	0.8414	0.9869	0.7731	0.9874	88097331	86945446	80944759	79922518
GCA_028858775.2.CM054449.2	104701121	hs1	0.8418	0.9870	0.7951	0.9873	88140367	86990625	83252110	82195436
GCA_028858775.2.CM054450.2	93846347	GCA_028858775.2	0.9761	1.0000	0.8460	1.0000	91604777	91604777	79394758	79394758
GCA_028858775.2.CM054450.2	93846347	GCA_028878055.2	0.7944	0.9608	0.7371	0.9615	74547659	71622817	69172941	66506564
GCA_028858775.2.CM054450.2	93846347	GCA_028885625.2	0.8188	0.9667	0.7537	0.9669	76836744	74274475	70733507	68388708
GCA_028858775.2.CM054450.2	93846347	GCA_028885655.2	0.8187	0.9666	0.7536	0.9669	76834076	74271583	70727026	68383169
GCA_028858775.2.CM054450.2	93846347	GCA_029281585.2	0.8383	0.9831	0.7671	0.9834	78669611	77339611	71990145	70792714
GCA_028858775.2.CM054450.2	93846347	GCA_029289425.2	0.9251	0.9871	0.8220	0.9902	86815903	85699796	77143829	76384795
GCA_028858775.2.CM054450.2	93846347	hg38	0.8457	0.9869	0.7342	0.9870	79367873	78327054	68898722	68003447
GCA_028858775.2.CM054450.2	93846347	hs1	0.8467	0.9867	0.7744	0.9870	79459395	78405748	72677072	71730889
GCA_028858775.2.CM054451.2	90695042	GCA_028858775.2	0.9428	1.0000	0.8268	1.0000	85506431	85506431	74983034	74983034
GCA_028858775.2.CM054451.2	90695042	GCA_028878055.2	0.7806	0.9606	0.7440	0.9611	70794154	68002191	67478577	64854729
GCA_028858775.2.CM054451.2	90695042	GCA_028885625.2	0.8076	0.9659	0.7693	0.9662	73242731	70747009	69770867	67414158
GCA_028858775.2.CM054451.2	90695042	GCA_028885655.2	0.8072	0.9659	0.7684	0.9662	73208986	70713578	69693677	67340049
GCA_028858775.2.CM054451.2	90695042	GCA_029281585.2	0.8285	0.9827	0.7848	0.9831	75144613	73845300	71182000	69975486
GCA_028858775.2.CM054451.2	90695042	GCA_029289425.2	0.8953	0.9907	0.8029	0.9946	81197267	80440600	72817766	72422805
GCA_028858775.2.CM054451.2	90695042	hg38	0.8340	0.9864	0.7767	0.9867	75640638	74614803	70442350	69506246
GCA_028858775.2.CM054451.2	90695042	hs1	0.8362	0.9862	0.7900	0.9866	75843216	74798498	71644567	70682816
GCA_028858775.2.CM054452.2	94528409	GCA_028858775.2	0.9792	1.0000	0.8042	1.0000	92566850	92566850	76020996	76020996
GCA_028858775.2.CM054452.2	94528409	GCA_028878055.2	0.7728	0.9546	0.6743	0.9555	73051890	69734881	63736202	60897638
GCA_028858775.2.CM054452.2	94528409	GCA_028885625.2	0.8003	0.9622	0.6930	0.9628	75654002	72791118	65510582	63072495
GCA_028858775.2.CM054452.2	94528409	GCA_028885655.2	0.8001	0.9622	0.6925	0.9628	75632365	72770894	65463646	63028067
GCA_028858775.2.CM054452.2	94528409	GCA_029281585.2	0.8283	0.9808	0.7063	0.9809	78302521	76801445	66762324	65484388
GCA_028858775.2.CM054452.2	94528409	GCA_029289425.2	0.9248	0.9864	0.7769	0.9884	87421867	86231720	73441196	72592330
GCA_028858775.2.CM054452.2	94528409	hg38	0.8397	0.9847	0.7059	0.9848	79377902	78161837	66728959	65713928
GCA_028858775.2.CM054452.2	94528409	hs1	0.8393	0.9846	0.7242	0.9848	79337607	78117682	68461798	67418717
GCA_028858775.2.CM054453.2	99595324	GCA_028858775.2	0.9727	1.0000	0.7592	1.0000	96876987	96876987	75616770	75616770
GCA_028858775.2.CM054453.2	99595324	GCA_028878055.2	0.7265	0.9588	0.6345	0.9592	72352073	69372799	63196939	60621194
GCA_028858775.2.CM054453.2	99595324	GCA_028885625.2	0.7633	0.9656	0.6760	0.9653	76021999	73406714	67323791	64989460
GCA_028858775.2.CM054453.2	99595324	GCA_028885655.2	0.7633	0.9656	0.6764	0.9653	76017879	73401432	67367868	65031282
GCA_028858775.2.CM054453.2	99595324	GCA_029281585.2	0.7792	0.9839	0.6919	0.9837	77609173	76358606	68912599	67792150
GCA_028858775.2.CM054453.2	99595324	GCA_029289425.2	0.8893	0.9845	0.7310	0.9923	88571323	87197145	72803922	72241086
GCA_028858775.2.CM054453.2	99595324	hg38	0.7873	0.9867	0.6508	0.9869	78413897	77372855	64820109	63969638
GCA_028858775.2.CM054453.2	99595324	hs1	0.7878	0.9867	0.7004	0.9869	78462539	77419642	69754935	68839770
GCA_028858775.2.CM054454.2	68087067	GCA_028858775.2	0.9734	1.0000	0.8197	1.0000	66275893	66275893	55809102	55809102
GCA_028858775.2.CM054454.2	68087067	GCA_028878055.2	0.6982	0.9532	0.6397	0.9543	47539278	45312802	43558550	41566151
GCA_028858775.2.CM054454.2	68087067	GCA_028885625.2	0.7496	0.9612	0.6872	0.9613	51036715	49054936	46792086	44981621
GCA_028858775.2.CM054454.2	68087067	GCA_028885655.2	0.7483	0.9611	0.6893	0.9613	50951999	48970765	46930077	45112837
GCA_028858775.2.CM054454.2	68087067	GCA_029281585.2	0.7750	0.9789	0.7170	0.9792	52765711	51652288	48820371	47806651
GCA_028858775.2.CM054454.2	68087067	GCA_029289425.2	0.9088	0.9861	0.7835	0.9920	61875338	61015541	53349141	52920689
GCA_028858775.2.CM054454.2	68087067	hg38	0.7908	0.9832	0.7127	0.9835	53840625	52934388	48522759	47723053
GCA_028858775.2.CM054454.2	68087067	hs1	0.7990	0.9825	0.7371	0.9836	54398486	53445598	50187851	49364035
GCA_028858775.2.CM054455.2	78115444	GCA_028858775.2	0.9872	1.0000	0.8008	1.0000	77116680	77116680	62553095	62553095
GCA_028858775.2.CM054455.2	78115444	GCA_028878055.2	0.7211	0.9596	0.6864	0.9601	56329665	54051986	53619648	51482799
GCA_028858775.2.CM054455.2	78115444	GCA_028885625.2	0.7453	0.9655	0.7075	0.9658	58216348	56209805	55268317	53379673
GCA_028858775.2.CM054455.2	78115444	GCA_028885655.2	0.7460	0.9655	0.7086	0.9658	58277750	56267832	55349505	53457632
GCA_028858775.2.CM054455.2	78115444	GCA_029281585.2	0.7634	0.9822	0.7256	0.9824	59630809	58567678	56680623	55685206
GCA_028858775.2.CM054455.2	78115444	GCA_029289425.2	0.9078	0.9810	0.7657	0.9908	70916049	69569958	59811252	59260936
GCA_028858775.2.CM054455.2	78115444	hg38	0.7693	0.9857	0.7246	0.9861	60093356	59236939	56598668	55810624
GCA_028858775.2.CM054455.2	78115444	hs1	0.7710	0.9856	0.7314	0.9860	60224193	59359326	57135872	56336563
GCA_028858775.2.CM054456.2	51350302	GCA_028858775.2	0.9614	1.0000	0.6726	1.0000	49368494	49368494	34537176	34537176
GCA_028858775.2.CM054456.2	51350302	GCA_028878055.2	0.6049	0.9578	0.5467	0.9593	31060913	29751687	28074571	26931508
GCA_028858775.2.CM054456.2	51350302	GCA_028885625.2	0.6570	0.9631	0.5922	0.9637	33739124	32494803	30410564	29305925
GCA_028858775.2.CM054456.2	51350302	GCA_028885655.2	0.6579	0.9631	0.5938	0.9637	33785271	32538518	30490930	29382988
GCA_028858775.2.CM054456.2	51350302	GCA_029281585.2	0.6817	0.9812	0.6046	0.9817	35006856	34349718	31044838	30475266
GCA_028858775.2.CM054456.2	51350302	GCA_029289425.2	0.8427	0.9779	0.6431	0.9902	43272401	42317547	33025232	32701268
GCA_028858775.2.CM054456.2	51350302	hg38	0.6916	0.9850	0.5845	0.9855	35514257	34980461	30012397	29575791
GCA_028858775.2.CM054456.2	51350302	hs1	0.6934	0.9850	0.6104	0.9855	35606752	35072579	31342260	30887681
GCA_028858775.2.CM054457.2	153896354	GCA_028858775.2	0.9997	1.0000	0.9261	1.0000	153852838	153852838	142527929	142527929
GCA_028858775.2.CM054457.2	153896354	GCA_028878055.2	0.8421	0.9656	0.7744	0.9669	129595460	125142820	119184445	115241612
GCA_028858775.2.CM054457.2	153896354	GCA_028885625.2	0.9072	0.9708	0.8359	0.9714	139611413	135529804	128649391	124967168
GCA_028858775.2.CM054457.2	153896354	GCA_028885655.2	0.9081	0.9708	0.8370	0.9714	139746235	135661456	128818038	125130345
GCA_028858775.2.CM054457.2	153896354	GCA_029281585.2	0.9461	0.9845	0.8753	0.9849	145598743	143337542	134707673	132676478
GCA_028858775.2.CM054457.2	153896354	GCA_029289425.2	0.9867	0.9960	0.9129	0.9963	151851995	151238305	140489006	139964867
GCA_028858775.2.CM054457.2	153896354	hg38	0.9596	0.9892	0.8670	0.9894	147671656	146070567	133420891	132011350
GCA_028858775.2.CM054457.2	153896354	hs1	0.9604	0.9892	0.8684	0.9895	147805042	146214328	133642973	132242339
GCA_028858775.2.CM054458.2	36447294	GCA_028858775.2	0.8989	1.0000	0.2722	1.0000	32760903	32760903	9919667	9919667
GCA_028858775.2.CM054458.2	36447294	GCA_028878055.2	0.3109	0.9135	0.0653	0.9351	11329836	10349471	2379000	2224594
GCA_028858775.2.CM054458.2	36447294	GCA_028885625.2	0.4042	0.9299	0.0937	0.9360	14732364	13699323	3415395	3196773
GCA_028858775.2.CM054458.2	36447294	GCA_028885655.2	0.4038	0.9301	0.0940	0.9355	14716390	13687827	3426723	3205745
GCA_028858775.2.CM054458.2	36447294	GCA_029281585.2	0.4837	0.9573	0.1079	0.9737	17630197	16878003	3931232	3827871
GCA_028858775.2.CM054458.2	36447294	GCA_029289425.2	0.8458	0.9805	0.2334	0.9543	30826227	30225646	8506776	8118174
GCA_028858775.2.CM054458.2	36447294	hg38	0.5748	0.9665	0.1373	0.9684	20948549	20247115	5002540	4844394
GCA_028858775.2.CM054458.2	36447294	hs1	0.5755	0.9664	0.1377	0.9673	20974723	20269625	5018401	4854496
GCA_028858775.2.CM068905.1	201579334	GCA_028858775.2	0.9916	1.0000	0.9604	1.0000	199883972	199883972	193599813	193599813
GCA_028858775.2.CM068905.1	201579334	GCA_028878055.2	0.8955	0.9612	0.8701	0.9614	180521623	173518451	175390857	168624234
GCA_028858775.2.CM068905.1	201579334	GCA_028885625.2	0.9291	0.9671	0.9040	0.9672	187277812	181119943	182223777	176241706
GCA_028858775.2.CM068905.1	201579334	GCA_028885655.2	0.9290	0.9672	0.9032	0.9672	187261459	181111445	182075819	176103399
GCA_028858775.2.CM068905.1	201579334	GCA_029281585.2	0.9522	0.9832	0.9314	0.9832	191938284	188706909	187744209	184584674
GCA_028858775.2.CM068905.1	201579334	GCA_029289425.2	0.9761	0.9944	0.9480	0.9952	196761273	195654930	191097335	190186491
GCA_028858775.2.CM068905.1	201579334	hg38	0.9568	0.9868	0.9308	0.9868	192872990	190321091	187629450	185150191
GCA_028858775.2.CM068905.1	201579334	hs1	0.9566	0.9868	0.9368	0.9868	192826336	190273233	188842693	186343357
GCA_028858775.2.CM068906.1	59520411	GCA_028858775.2	0.8452	1.0000	0.5675	1.0000	50306885	50306885	33779017	33779017
GCA_028858775.2.CM068906.1	59520411	GCA_028878055.2	0.5370	0.9559	0.4565	0.9576	31961610	30553466	27169940	26019067
GCA_028858775.2.CM068906.1	59520411	GCA_028885625.2	0.5674	0.9618	0.4819	0.9627	33772079	32481378	28683950	27614403
GCA_028858775.2.CM068906.1	59520411	GCA_028885655.2	0.5668	0.9617	0.4816	0.9627	33735358	32442905	28662841	27593551
GCA_028858775.2.CM068906.1	59520411	GCA_029281585.2	0.5901	0.9813	0.4897	0.9819	35121221	34464042	29144231	28616156
GCA_028858775.2.CM068906.1	59520411	GCA_029289425.2	0.7339	0.9787	0.5180	0.9933	43682702	42753567	30832417	30627358
GCA_028858775.2.CM068906.1	59520411	hg38	0.6018	0.9847	0.4863	0.9854	35818985	35271847	28943428	28520247
GCA_028858775.2.CM068906.1	59520411	hs1	0.6031	0.9847	0.5028	0.9854	35897832	35350253	29928750	29493244
_Total_	3177739762	GCA_028858775.2	0.9787	1.0000	0.8738	1.0000	3109975192	3109975192	2776812129	2776812129
_Total_	3177739762	GCA_028878055.2	0.8176	0.9602	0.7667	0.9609	2598258682	2494800064	2436488916	2341293936
_Total_	3177739762	GCA_028885625.2	0.8549	0.9662	0.8010	0.9665	2716679754	2624798998	2545448535	2460300779
_Total_	3177739762	GCA_028885655.2	0.8551	0.9662	0.8012	0.9666	2717172187	2625299292	2546136614	2460982055
_Total_	3177739762	GCA_029281585.2	0.8795	0.9827	0.8222	0.9830	2794802259	2746468664	2612711762	2568212231
_Total_	3177739762	GCA_029289425.2	0.9425	0.9911	0.8550	0.9939	2994927700	2968344577	2717020132	2700342783
_Total_	3177739762	hg38	0.8874	0.9865	0.8166	0.9867	2819992770	2781800177	2594829452	2560363143
_Total_	3177739762	hs1	0.8882	0.9864	0.8303	0.9867	2822339514	2783961743	2638534072	2603368610