ALPHABET: A C G T 
ORDER: 0
SUBST_MOD: REV
TRAINING_LNL: -132672031.342165
BACKGROUND: 0.299136 0.200349 0.200036 0.300480 
RATE_MAT:
  -0.849704    0.159386    0.545419    0.144899 
   0.237975   -1.226483    0.172686    0.815822 
   0.815626    0.172956   -1.227423    0.238841 
   0.144251    0.543960    0.159001   -0.847213 
TREE: 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Anc59:0.0189499,(((Xerus_inauris:0.0646653,(Spermophilus_dauricus:0.0124983,(Ictidomys_tridecemlineatus:0.0151679,Marmota_marmota:0.02328)fullTreeAnc60:0.000864876)fullTreeAnc61:0.0662678)fullTreeAnc62:0.040991,Aplodontia_rufa:0.127182)fullTreeAnc63:0.0565896,(Muscardinus_avellanarius:0.115865,(Glis_glis:0.053554,Graphiurus_murinus:0.0788132)fullTreeAnc64:0.00260922)fullTreeAnc65:0.0806378)fullTreeAnc66:0.0235284)fullTreeAnc67:0.00286498)fullTreeAnc68:0.0368586)fullTreeAnc69:0.0119995)fullTreeAnc115:0.0309181,((Solenodon_paradoxus:0.188715,((Erinaceus_europaeus:0.273082,(Crocidura_indochinensis:0.159606,Sorex_araneus:0.15035)fullTreeAnc116:0.1531)fullTreeAnc117:0.0331808,(Uropsilus_gracilis:0.14234,(Condylura_cristata:0.11322,Scalopus_aquaticus:0.0720299)fullTreeAnc118:0.0375338)fullTreeAnc119:0.0972456)fullTreeAnc120:0.00618255)fullTreeAnc121:0.034528,(((((Megaderma_lyra:0.105744,Craseonycteris_thonglongyai:0.108551)fullTreeAnc122:0.0162116,((Hipposideros_armiger:0.0203138,Hipposideros_galeritus:0.0306626)fullTreeAnc123:0.0410022,Rhinolophus_sinicus:0.0620693)fullTreeAnc124:0.025064)fullTreeAnc125:0.0144121,(Macroglossus_sobrinus:0.0485012,(Eidolon_helvum:0.0368024,((Pteropus_vampyrus:0.00773022,Pteropus_alecto:0.00765902)fullTreeAnc126:0.023597,Rousettus_aegyptiacus:0.0460818)fullTreeAnc127:0.00110244)fullTreeAnc128:0.0015825)fullTreeAnc129:0.07307)fullTreeAnc130:0.0129515,((Noctilio_leporinus:0.112432,((Pteronotus_parnellii:0.0762277,Mormoops_blainvillei:0.0756986)fullTreeAnc131:0.00615123,((((Carollia_perspicillata:0.0463677,Artibeus_jamaicensis:0.0532932)fullTreeAnc132:0.00829348,Anoura_caudifer:0.0471892)fullTreeAnc133:0.00556975,(Tonatia_saurophila:0.0556458,Micronycteris_hirsuta:0.06216)fullTreeAnc134:0.00107207)fullTreeAnc135:0.00668961,Desmodus_rotundus:0.051037)fullTreeAnc136:0.032065)fullTreeAnc137:0.00927408)fullTreeAnc138:0.0292215,(((((Pipistrellus_pipistrellus:0.0506466,Eptesicus_fuscus:0.0220734)fullTreeAnc139:0.0041352,Lasiurus_borealis:0.0605436)fullTreeAnc140:0.0119485,(Murina_feae:0.0504109,((Myotis_myotis:0.0187742,(Myotis_brandtii:0.0104471,Myotis_lucifugus:0.0112979)fullTreeAnc141:0.00504464)fullTreeAnc142:0.000528275,Myotis_davidii:0.0226421)fullTreeAnc143:0.01349)fullTreeAnc144:0.00882098)fullTreeAnc145:0.0543687,(Miniopterus_natalensis:0.00586294,Miniopterus_schreibersii:0.00456451)fullTreeAnc146:0.0778056)fullTreeAnc147:0.00540425,Tadarida_brasiliensis:0.0823886)fullTreeAnc148:0.0120421)fullTreeAnc149:0.0288209)fullTreeAnc150:0.0309109,(((Vicugna_pacos:0.0161542,(Camelus_dromedarius:0.00213989,(Camelus_ferus:0.000850508,Camelus_bactrianus:0.000871318)fullTreeAnc151:0.0014944)fullTreeAnc152:0.010578)fullTreeAnc153:0.0985471,(((Hippopotamus_amphibius:0.065968,((Eubalaena_japonica:0.00899281,((Balaenoptera_bonaerensis:0.00328319,Balaenoptera_acutorostrata:0.00366598)fullTreeAnc154:0.00456391,Eschrichtius_robustus:0.00751182)fullTreeAnc155:0.00404813)fullTreeAnc156:0.00489926,(Kogia_breviceps:0.0256282,((Platanista_gangetica:0.0220232,(Mesoplodon_bidens:0.00835738,Ziphius_cavirostris:0.00712219)fullTreeAnc157:0.0109255)fullTreeAnc158:0.000649044,((Inia_geoffrensis:0.017649,Lipotes_vexillifer:0.0146758)fullTreeAnc159:0.00136477,(((Neophocaena_asiaeorientalis:0.00275064,Phocoena_phocoena:0.00291638)fullTreeAnc160:0.00609037,(Delphinapterus_leucas:0.0027973,Monodon_monoceros:0.00271068)fullTreeAnc161:0.00379645)fullTreeAnc162:0.00365908,(Tursiops_truncatus:0.00604089,Orcinus_orca:0.00547522)fullTreeAnc163:0.00540204)fullTreeAnc164:0.00459986)fullTreeAnc165:0.00486166)fullTreeAnc166:0.00136361)fullTreeAnc167:0.00223711)fullTreeAnc168:0.0297733)fullTreeAnc169:0.00895057,(Tragulus_javanicus:0.112051,((((Moschus_moschiferus:0.0355731,((Bubalus_bubalis:0.0139861,(((Bos_taurus:0.00179196,Bos_indicus:0.0010459)fullTreeAnc170:0.00346266,Bos_mutus:0.00383084)fullTreeAnc171:0.000793344,Bison_bison:0.00360608)fullTreeAnc172:0.0114444)fullTreeAnc173:0.011807,((Beatragus_hunteri:0.019251,((Ammotragus_lervia:0.0112527,(Hemitragus_hylocrius:0.00960627,(Capra_hircus:0.00127421,Capra_aegagrus:0.00132388)fullTreeAnc174:0.010265)fullTreeAnc175:0.000580624)fullTreeAnc176:0.000375989,(Ovis_aries:0.00411911,Ovis_canadensis:0.00377704)fullTreeAnc177:0.00610953)fullTreeAnc178:0.00984738)fullTreeAnc179:0.000588638,(Pantholops_hodgsonii:0.0187902,Saiga_tatarica:0.0351989)fullTreeAnc180:0.000282699)fullTreeAnc181:0.0128519)fullTreeAnc182:0.00596243)fullTreeAnc183:0.00540578,(Okapia_johnstoni:0.0154247,Giraffa_tippelskirchi:0.0137997)fullTreeAnc184:0.0179989)fullTreeAnc185:0.000692532,Antilocapra_americana:0.0458179)fullTreeAnc186:0.000869571,((Odocoileus_virginianus:0.00941114,Rangifer_tarandus:0.00855783)fullTreeAnc187:0.0106369,Elaphurus_davidianus:0.0157769)fullTreeAnc188:0.0196287)fullTreeAnc189:0.0456221)fullTreeAnc190:0.03955)fullTreeAnc191:0.0168069,(Catagonus_wagneri:0.0590217,Sus_scrofa:0.0546012)fullTreeAnc192:0.0790445)fullTreeAnc193:0.00922581)fullTreeAnc194:0.042973,(((((((Cryptoprocta_ferox:0.028881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